Last updated on 2019-12-16 10:48:17 CET.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.99.3 | 44.06 | 198.71 | 242.77 | NOTE | |
r-devel-linux-x86_64-debian-gcc | 0.99.3 | 42.27 | 163.12 | 205.39 | NOTE | |
r-devel-linux-x86_64-fedora-clang | 0.99.3 | 342.72 | NOTE | |||
r-devel-linux-x86_64-fedora-gcc | 0.99.3 | 318.78 | NOTE | |||
r-devel-windows-ix86+x86_64 | 0.99.3 | 60.00 | 236.00 | 296.00 | NOTE | |
r-devel-windows-ix86+x86_64-gcc8 | 0.99.3 | 67.00 | 266.00 | 333.00 | NOTE | |
r-patched-linux-x86_64 | 0.99.3 | 36.57 | 181.46 | 218.03 | NOTE | |
r-patched-solaris-x86 | 0.99.3 | 517.70 | NOTE | |||
r-release-linux-x86_64 | 0.99.3 | 43.75 | 180.60 | 224.35 | NOTE | |
r-release-windows-ix86+x86_64 | 0.99.3 | 58.00 | 188.00 | 246.00 | NOTE | |
r-release-osx-x86_64 | 0.99.3 | WARN | ||||
r-oldrel-windows-ix86+x86_64 | 0.99.3 | 47.00 | 299.00 | 346.00 | NOTE | |
r-oldrel-osx-x86_64 | 0.99.3 | WARN |
Version: 0.99.3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'NFPdata'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.99.3
Check: installed package size
Result: NOTE
installed size is 8.0Mb
sub-directories of 1Mb or more:
data 7.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.99.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘NFP.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect,
is.unsorted, lapply, mapply, match, mget, order, paste, pmax,
pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply,
setdiff, sort, table, tapply, union, unique, unsplit, which,
which.max, which.min
Loading required package: graphite
Quitting from lines 135-143 (NFP.Rmd)
Error: processing vignette 'NFP.Rmd' failed with diagnostics:
error creating directory: /Users/urbanek/Library/Caches/graphite-bioc/12
--- failed re-building ‘NFP.Rmd’
SUMMARY: processing the following file failed:
‘NFP.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.99.3
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: ‘graphite’ ‘NFPdata’
Flavor: r-oldrel-osx-x86_64
Version: 0.99.3
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colMeans, colSums, colnames,
dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
intersect, is.unsorted, lapply, lengths, mapply, match, mget,
order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
rowMeans, rowSums, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which, which.max, which.min
Loading required package: graphite
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called 'graphite'
Quitting from lines 135-143 (NFP.Rmd)
Error: processing vignette 'NFP.Rmd' failed with diagnostics:
could not find function "pathways"
Execution halted
Flavor: r-oldrel-osx-x86_64