CRAN Package Check Results for Package OpenMx

Last updated on 2017-07-20 05:49:39.

Additional issues

rchk

Check Details

Version: 2.7.12
Check: installed package size
Result: NOTE
     installed size is 143.5Mb
     sub-directories of 1Mb or more:
     R 1.1Mb
     libs 135.0Mb
     models 4.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 2.7.12
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘umx’
Flavor: r-patched-solaris-x86

Version: 2.7.12
Check: examples
Result: ERROR
    Running examples in ‘OpenMx-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: mxCI
    > ### Title: Create mxCI Object
    > ### Aliases: mxCI
    >
    > ### ** Examples
    >
    >
    > library(OpenMx)
    >
    > # generate data
    > covariance <- matrix(c(1.0, 0.5, 0.5, 1.0),
    + nrow=2,
    + dimnames=list(c("a", "b"), c("a", "b")))
    >
    > data <- mxData(covariance, "cov", numObs=100)
    >
    > # create an expected covariance matrix
    > expect <- mxMatrix("Symm", 2, 2,
    + free=TRUE,
    + values=c(1, .5, 1),
    + labels=c("var1", "cov12", "var2"),
    + name="expectedCov")
    >
    > # request 95 percent confidence intervals
    > ci <- mxCI(c("var1", "cov12", "var2"))
    >
    > # specify the model
    > model <- mxModel(model="Confidence Interval Example",
    + data, expect, ci,
    + mxExpectationNormal("expectedCov", dimnames=c("a", "b")),
    + mxFitFunctionML())
    >
    > # run the model
    > results <- mxRun(model, intervals=TRUE)
    Running Confidence Interval Example with 3 parameters
    
     *** caught segfault ***
    address fc121d60, cause 'memory not mapped'
    
    Traceback:
     1: runHelper(model, frontendStart, intervals, silent, suppressWarnings, unsafe, checkpoint, useSocket, onlyFrontend, useOptimizer)
     2: mxRun(model, intervals = TRUE)
    An irrecoverable exception occurred. R is aborting now ...
Flavor: r-patched-solaris-x86

Version: 2.7.12
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘Rmpi’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 2.7.12
Check: examples
Result: ERROR
    Running examples in ‘OpenMx-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: OpenMx
    > ### Title: OpenMx: An package for Structural Equation Modeling and Matrix
    > ### Algebra Optimization
    > ### Aliases: OpenMx OpenMx-package
    >
    > ### ** Examples
    >
    > library(OpenMx)
    > data(demoOneFactor)
    > # ===============================
    > # = Make and run a 1-factor CFA =
    > # ===============================
    >
    > latents = c("G") # the latent factor
    > manifests = names(demoOneFactor) # manifest variables to be modeled
    > # ====================
    > # = Make the MxModel =
    > # ====================
    > m1 <- mxModel("One Factor", type = "RAM",
    + manifestVars = manifests, latentVars = latents,
    + mxPath(from = latents, to = manifests),
    + mxPath(from = manifests, arrows = 2),
    + mxPath(from = latents, arrows = 2, free = FALSE, values = 1.0),
    + mxData(cov(demoOneFactor), type = "cov", numObs = 500)
    + )
    >
    > # ===============================
    > # = mxRun it and get a summary! =
    > # ===============================
    >
    > m1 = mxRun(m1)
    Running One Factor with 10 parameters
    Error in runHelper(model, frontendStart, intervals, silent, suppressWarnings, :
     c++ exception (unknown reason)
    Calls: mxRun -> runHelper -> .Call
    Execution halted
Flavor: r-release-osx-x86_64