CRAN Package Check Results for Package SpaDES.core

Last updated on 2018-11-20 16:51:22 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.3 34.78 358.15 392.93 OK
r-devel-linux-x86_64-debian-gcc 0.2.3 29.33 280.59 309.92 OK
r-devel-linux-x86_64-fedora-clang 0.2.3 240.14 OK
r-devel-linux-x86_64-fedora-gcc 0.2.3 241.44 OK
r-devel-windows-ix86+x86_64 0.2.3 79.00 455.00 534.00 OK
r-patched-linux-x86_64 0.2.3 25.04 348.20 373.24 OK
r-patched-solaris-x86 0.2.3 603.60 WARN
r-release-linux-x86_64 0.2.3 32.14 350.02 382.16 OK
r-release-windows-ix86+x86_64 0.2.3 41.00 360.00 401.00 OK
r-release-osx-x86_64 0.2.3 ERROR
r-oldrel-windows-ix86+x86_64 0.2.3 59.00 417.00 476.00 OK
r-oldrel-osx-x86_64 0.2.3 ERROR

Check Details

Version: 0.2.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'igraph'
    
    The following objects are masked from 'package:stats':
    
     decompose, spectrum
    
    The following object is masked from 'package:base':
    
     union
    
    Loading required package: quickPlot
    Loading required package: reproducible
    
    Attaching package: 'reproducible'
    
    The following object is masked from 'package:igraph':
    
     %>%
    
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Loading required package: SpaDES.tools
    Loading required package: RandomFields
    Loading required package: sp
    Loading required package: RandomFieldsUtils
    
    Attaching package: 'RandomFields'
    
    The following object is masked from 'package:RandomFieldsUtils':
    
     RFoptions
    
    The following objects are masked from 'package:base':
    
     abs, acosh, asin, asinh, atan, atan2, atanh, cos, cosh, exp,
     expm1, floor, gamma, lgamma, log, log1p, log2, logb, max, min,
     round, sin, sinh, sqrt, tan, tanh, trunc
    
    Quitting from lines 377-383 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    there is no package called 'webshot'
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.3
Check: tests
Result: ERROR
     Running ‘test-all.R’ [142s/217s]
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     Using cached copy of .inputObjects event in test module. Adding to memoised copy.
     ── 1. Error: 3 levels of parent and child modules load and show correctly (@test
     At optimal_modularity.c:85 : GLPK is not available, Unimplemented function call
     1: moduleGraph(mySim, FALSE) at testthat/test-module-deps-methods.R:198
     2: moduleGraph(mySim, FALSE)
     3: cluster_optimal(grph)
    
     Using cached copy of .inputObjects event in child6 module. Adding to memoised copy.
     Using cached copy of .inputObjects event in child6 module. Adding to memoised copy.
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 383 SKIPPED: 34 FAILED: 1
     1. Error: 3 levels of parent and child modules load and show correctly (@test-module-deps-methods.R#198)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-osx-x86_64

Version: 0.2.3
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    The following object is masked from 'package:utils':
    
     citation
    
    Loading required package: SpaDES.tools
    Loading required package: RandomFields
    Loading required package: sp
    Loading required package: RandomFieldsUtils
    
    Attaching package: 'RandomFields'
    
    The following object is masked from 'package:RandomFieldsUtils':
    
     RFoptions
    
    The following objects are masked from 'package:base':
    
     abs, acosh, asin, asinh, atan, atan2, atanh, cos, cosh, exp,
     expm1, floor, gamma, lgamma, log, log1p, log2, logb, max, min,
     round, sin, sinh, sqrt, tan, tanh, trunc
    
    Quitting from lines 377-383 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.2.3
Check: tests
Result: ERROR
     Running ‘test-all.R’ [152s/226s]
    Running the tests in ‘tests/test-all.R’ failed.
    Last 13 lines of output:
     Using cached copy of .inputObjects event in test module. Adding to memoised copy.
     ── 1. Error: 3 levels of parent and child modules load and show correctly (@test
     At optimal_modularity.c:85 : GLPK is not available, Unimplemented function call
     1: moduleGraph(mySim, FALSE) at testthat/test-module-deps-methods.R:198
     2: moduleGraph(mySim, FALSE)
     3: cluster_optimal(grph)
    
     Using cached copy of .inputObjects event in child6 module. Adding to memoised copy.
     Using cached copy of .inputObjects event in child6 module. Adding to memoised copy.
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 383 SKIPPED: 34 FAILED: 1
     1. Error: 3 levels of parent and child modules load and show correctly (@test-module-deps-methods.R#198)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-oldrel-osx-x86_64