CRAN Package Check Results for Maintainer ‘Achim Zeileis <Achim.Zeileis at R-project.org>’

Last updated on 2019-12-15 17:49:28 CET.

Package FAIL ERROR NOTE OK
AER 13
betareg 10 3
colorspace 4 4 5
ctv 13
dynlm 13
exams 5 8
Formula 13
fortunes 13
fxregime 1 12
glmx 13
glogis 13
ineq 13
lagsarlmtree 8 5
lmtest 13
psychotools 13
psychotree 13
pwt 8 5
pwt8 13
pwt9 13
sandwich 3 10
strucchange 3 10
zoo 13

Package AER

Current CRAN status: OK: 13

Package betareg

Current CRAN status: NOTE: 10, OK: 3

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     'betareg-ext.Rnw'... [15s/17s] NOTE
    differences from 'betareg-ext.Rout.save'
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     'betareg.Rnw'... [6s/7s] OK
Flavor: r-devel-linux-x86_64-debian-clang

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     ‘betareg-ext.Rnw’... [11s/16s] NOTE
    differences from ‘betareg-ext.Rout.save’
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     ‘betareg.Rnw’... [4s/6s] OK
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     ‘betareg-ext.Rnw’... [17s/20s] NOTE
    differences from ‘betareg-ext.Rout.save’
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     ‘betareg.Rnw’... OK
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     ‘betareg-ext.Rnw’... [18s/19s] NOTE
    differences from ‘betareg-ext.Rout.save’
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     ‘betareg.Rnw’... OK
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     'betareg-ext.Rnw'... [18s] NOTE
    differences from 'betareg-ext.Rout.save'
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     'betareg.Rnw'... [8s] OK
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     ‘betareg-ext.Rnw’... [13s/14s] NOTE
    differences from ‘betareg-ext.Rout.save’
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     ‘betareg.Rnw’... [5s/6s] OK
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     ‘betareg-ext.Rnw’... [19s/23s] NOTE
    differences from ‘betareg-ext.Rout.save’
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     ‘betareg.Rnw’... OK
Flavor: r-patched-solaris-x86

Version: 3.1-2
Check: running R code from vignettes
Result: NOTE
     'betareg-ext.Rnw'... [12s] NOTE
    differences from 'betareg-ext.Rout.save'
    176c176
    < | 0.38093218 -0.08622808 4.80766206
    ---
    > | 0.38093218 -0.08622808 4.80766205
     'betareg.Rnw'... [6s] OK
Flavor: r-release-windows-ix86+x86_64

Package colorspace

Current CRAN status: ERROR: 4, NOTE: 4, OK: 5

Version: 1.4-1
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'random.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.4-1
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-devel-windows-ix86+x86_64

Version: 1.4-1
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'colorspace-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: scale_colour_continuous_diverging
    > ### Title: HCL-Based Continuous Diverging Color Scales for ggplot2
    > ### Aliases: scale_colour_continuous_diverging
    > ### scale_color_continuous_diverging scale_fill_continuous_diverging
    >
    > ### ** Examples
    >
    > # adapted from stackoverflow: https://stackoverflow.com/a/20127706/4975218
    >
    > library("ggplot2")
    >
    > # generate dataset and base plot
    > set.seed(100)
    > df <- data.frame(country = LETTERS, V = runif(26, -40, 40))
    > df$country = factor(LETTERS, LETTERS[order(df$V)]) # reorder factors
    > gg <- ggplot(df, aes(x = country, y = V, fill = V)) +
    + geom_bar(stat = "identity") +
    + labs(y = "Under/over valuation in %", x = "Country") +
    + coord_flip() + theme_minimal()
    >
    > # plot with default diverging scale
    > gg + scale_fill_continuous_diverging()
    Error in if (!alpha || all(lab_in[, 4] == 1)) { :
     missing value where TRUE/FALSE needed
    Calls: scale_fill_continuous_diverging ... <Anonymous> -> ggproto -> <Anonymous> -> colour_ramp
    Execution halted
Flavors: r-devel-windows-ix86+x86_64-gcc8, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Package ctv

Current CRAN status: OK: 13

Package dynlm

Current CRAN status: OK: 13

Package exams

Current CRAN status: NOTE: 5, OK: 8

Version: 2.3-4
Check: R code for possible problems
Result: NOTE
    Found the following assignments to the global environment:
    File 'exams/R/xexams.R':
     assign(".xweave_svg_grdevice", .xweave_svg_grdevice, envir = .GlobalEnv)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-patched-linux-x86_64, r-release-linux-x86_64

Package Formula

Current CRAN status: OK: 13

Package fortunes

Current CRAN status: OK: 13

Package fxregime

Current CRAN status: FAIL: 1, NOTE: 12

Version: 1.0-3
Flags: --no-vignettes
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to 'foreach' in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Flags: --no-vignettes
Check: R code for possible problems
Result: NOTE
    fxreturns: no visible binding for global variable 'FXRatesCHF'
    fxreturns : <anonymous>: no visible global function definition for
     'tail'
    gbreakpoints: no visible global function definition for '%dopar%'
    gbreakpoints: no visible global function definition for 'foreach'
    Undefined global functions or variables:
     %dopar% FXRatesCHF foreach tail
    Consider adding
     importFrom("utils", "tail")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0-3
Check: dependencies in R code
Result: NOTE
    'library' or 'require' call to ‘foreach’ in package code.
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0-3
Check: R code for possible problems
Result: NOTE
    fxreturns: no visible binding for global variable ‘FXRatesCHF’
    fxreturns : <anonymous>: no visible global function definition for
     ‘tail’
    gbreakpoints: no visible global function definition for ‘%dopar%’
    gbreakpoints: no visible global function definition for ‘foreach’
    Undefined global functions or variables:
     %dopar% FXRatesCHF foreach tail
    Consider adding
     importFrom("utils", "tail")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0-3
Check: re-building of vignette outputs
Result: FAIL
Flavor: r-release-osx-x86_64

Package glmx

Current CRAN status: OK: 13

Package glogis

Current CRAN status: OK: 13

Package ineq

Current CRAN status: OK: 13

Package lagsarlmtree

Current CRAN status: NOTE: 8, OK: 5

Version: 1.0-1
Check: installed package size
Result: NOTE
     installed size is 8.4Mb
     sub-directories of 1Mb or more:
     data 8.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package lmtest

Current CRAN status: OK: 13

Package psychotools

Current CRAN status: OK: 13

Package psychotree

Current CRAN status: OK: 13

Package pwt

Current CRAN status: NOTE: 8, OK: 5

Version: 7.1-1
Check: installed package size
Result: NOTE
     installed size is 7.3Mb
     sub-directories of 1Mb or more:
     data 7.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package pwt8

Current CRAN status: OK: 13

Package pwt9

Current CRAN status: OK: 13

Package sandwich

Current CRAN status: NOTE: 3, OK: 10

Version: 2.5-1
Check: running R code from vignettes
Result: NOTE
     'sandwich-CL.Rnw'... [11s/12s] NOTE
    differences from 'sandwich-CL.Rout.save'
    119,120d118
    < Warning: stack imbalance in '<-', 20 then 21
    < Warning: stack imbalance in 'withVisible', 14 then 15
     'sandwich-OOP.Rnw'... [4s/5s] OK
     'sandwich.Rnw'... [1s/2s] OK
Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.5-1
Check: running R code from vignettes
Result: NOTE
     ‘sandwich-CL.Rnw’... [11s/12s] NOTE
    differences from ‘sandwich-CL.Rout.save’
    119,120d118
    < Warning: stack imbalance in '<-', 20 then 21
    < Warning: stack imbalance in 'withVisible', 14 then 15
     ‘sandwich-OOP.Rnw’... [3s/3s] OK
     ‘sandwich.Rnw’... [1s/2s] OK
Flavor: r-patched-linux-x86_64

Version: 2.5-1
Check: running R code from vignettes
Result: NOTE
     'sandwich-CL.Rnw'... [11s] NOTE
    differences from 'sandwich-CL.Rout.save'
    119,120d118
    < Warning: stack imbalance in '<-', 20 then 21
    < Warning: stack imbalance in 'withVisible', 14 then 15
     'sandwich-OOP.Rnw'... [3s] OK
     'sandwich.Rnw'... [1s] OK
Flavor: r-release-windows-ix86+x86_64

Package strucchange

Current CRAN status: ERROR: 3, NOTE: 10

Additional issues

rchk

Version: 1.5-2
Check: R code for possible problems
Result: NOTE
    efpFunctional: multiple local function definitions for 'plotProcess'
     with different formal arguments
    mefp.efp: multiple local function definitions for 'computeEmpProc' with
     different formal arguments
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.5-2
Check: examples
Result: ERROR
    Running examples in ‘strucchange-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: USIncExp
    > ### Title: Income and Expenditures in the US
    > ### Aliases: USIncExp
    > ### Keywords: datasets
    >
    > ### ** Examples
    >
    > ## These example are presented in the vignette distributed with this
    > ## package, the code was generated by Stangle("strucchange-intro.Rnw")
    >
    > ###################################################
    > ### chunk number 1: data
    > ###################################################
    > library("strucchange")
    > data("USIncExp")
    > plot(USIncExp, plot.type = "single", col = 1:2, ylab = "billion US$")
    > legend(1960, max(USIncExp), c("income", "expenditures"),
    + lty = c(1,1), col = 1:2, bty = "n")
    >
    >
    > ###################################################
    > ### chunk number 2: subset
    > ###################################################
    > library("strucchange")
    > data("USIncExp")
    > USIncExp2 <- window(USIncExp, start = c(1985,12))
    >
    >
    > ###################################################
    > ### chunk number 3: ecm-setup
    > ###################################################
    > coint.res <- residuals(lm(expenditure ~ income, data = USIncExp2))
    > coint.res <- lag(ts(coint.res, start = c(1985,12), freq = 12), k = -1)
    > USIncExp2 <- cbind(USIncExp2, diff(USIncExp2), coint.res)
    Error in .cbind.ts(list(e1, e2), c(deparse(substitute(e1))[1L], deparse(substitute(e2))[1L]), :
     not all series have the same phase
    Calls: cbind ... .cbind.ts -> vapply -> diff -> diff.ts -> Ops.ts -> .cbind.ts
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.5-2
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘strucchange-intro.Rnw’
     ...
    
    > library("strucchange")
    Loading required package: zoo
    
    Attaching package: ‘zoo’
    
    The following objects are masked from ‘package:base’:
    
     as.Date, as.Date.numeric
    
    Loading required package: sandwich
    
    > data("USIncExp")
    
    > plot(USIncExp, plot.type = "single", col = 1:2, ylab = "billion US$")
    
    > legend(1960, max(USIncExp), c("income", "expenditures"),
    + lty = c(1, 1), col = 1:2, bty = "n")
    
    > library("strucchange")
    
    > data("USIncExp")
    
    > USIncExp2 <- window(USIncExp, start = c(1985, 12))
    
    > coint.res <- residuals(lm(expenditure ~ income, data = USIncExp2))
    
    > coint.res <- lag(ts(coint.res, start = c(1985, 12),
    + freq = 12), k = -1)
    
    > USIncExp2 <- cbind(USIncExp2, diff(USIncExp2), coint.res)
    
     When sourcing ‘strucchange-intro.R’:
    Error: not all series have the same phase
    Execution halted
    
     ‘strucchange-intro.Rnw’... failed
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.5-2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘strucchange-intro.Rnw’ using Sweave
    Loading required package: zoo
    
    Attaching package: ‘zoo’
    
    The following objects are masked from ‘package:base’:
    
     as.Date, as.Date.numeric
    
    Loading required package: sandwich
    
    Error: processing vignette 'strucchange-intro.Rnw' failed with diagnostics:
     chunk 3 (label = ecm-setup)
    Error in .cbind.ts(list(e1, e2), c(deparse(substitute(e1))[1L], deparse(substitute(e2))[1L]), :
     not all series have the same phase
    
    --- failed re-building ‘strucchange-intro.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘strucchange-intro.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.5-2
Check: examples
Result: ERROR
    Running examples in ‘strucchange-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: USIncExp
    > ### Title: Income and Expenditures in the US
    > ### Aliases: USIncExp
    > ### Keywords: datasets
    >
    > ### ** Examples
    >
    > ## These example are presented in the vignette distributed with this
    > ## package, the code was generated by Stangle("strucchange-intro.Rnw")
    >
    > ###################################################
    > ### chunk number 1: data
    > ###################################################
    > library("strucchange")
    > data("USIncExp")
    > plot(USIncExp, plot.type = "single", col = 1:2, ylab = "billion US$")
    > legend(1960, max(USIncExp), c("income", "expenditures"),
    + lty = c(1,1), col = 1:2, bty = "n")
    >
    >
    > ###################################################
    > ### chunk number 2: subset
    > ###################################################
    > library("strucchange")
    > data("USIncExp")
    > USIncExp2 <- window(USIncExp, start = c(1985,12))
    >
    >
    > ###################################################
    > ### chunk number 3: ecm-setup
    > ###################################################
    > coint.res <- residuals(lm(expenditure ~ income, data = USIncExp2))
    > coint.res <- lag(ts(coint.res, start = c(1985,12), freq = 12), k = -1)
    > USIncExp2 <- cbind(USIncExp2, diff(USIncExp2), coint.res)
    Error in .cbind.ts(list(e1, e2), c(deparse(substitute(e1))[1L], deparse(substitute(e2))[1L]), :
     not all series have the same phase
    Calls: cbind ... .cbind.ts -> vapply -> diff -> diff.ts -> Ops.ts -> .cbind.ts
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.5-2
Check: running R code from vignettes
Result: ERROR
    Errors in running code in vignettes:
    when running code in ‘strucchange-intro.Rnw’
    
    > library("strucchange")
    Loading required package: zoo
    
    Attaching package: ‘zoo’
    
    The following objects are masked from ‘package:base’:
    
     as.Date, as.Date.numeric
    
    Loading required package: sandwich
    
    > data("USIncExp")
    
    > plot(USIncExp, plot.type = "single", col = 1:2, ylab = "billion US$")
    
    > legend(1960, max(USIncExp), c("income", "expenditures"),
    + lty = c(1, 1), col = 1:2, bty = "n")
    
    > library("strucchange")
    
    > data("USIncExp")
    
    > USIncExp2 <- window(USIncExp, start = c(1985, 12))
    
    > coint.res <- residuals(lm(expenditure ~ income, data = USIncExp2))
    
    > coint.res <- lag(ts(coint.res, start = c(1985, 12),
    + freq = 12), k = -1)
    
    > USIncExp2 <- cbind(USIncExp2, diff(USIncExp2), coint.res)
    
     When sourcing ‘strucchange-intro.R’:
    Error: not all series have the same phase
    Execution halted
    
     ‘strucchange-intro.Rnw’... failed
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.5-2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘strucchange-intro.Rnw’ using Sweave
    Loading required package: zoo
    
    Attaching package: ‘zoo’
    
    The following objects are masked from ‘package:base’:
    
     as.Date, as.Date.numeric
    
    Loading required package: sandwich
    
    Error: processing vignette 'strucchange-intro.Rnw' failed with diagnostics:
     chunk 3 (label = ecm-setup)
    Error in .cbind.ts(list(e1, e2), c(deparse(substitute(e1))[1L], deparse(substitute(e2))[1L]), :
     not all series have the same phase
    
    --- failed re-building ‘strucchange-intro.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘strucchange-intro.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package zoo

Current CRAN status: OK: 13