CRAN Package Check Results for Package ebimetagenomics

Last updated on 2017-07-21 12:47:17.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2 1.70 31.92 33.62 ERROR
r-devel-linux-x86_64-debian-gcc 0.2 1.70 31.99 33.69 ERROR
r-devel-linux-x86_64-fedora-clang 0.2 49.98 ERROR
r-devel-linux-x86_64-fedora-gcc 0.2 43.56 ERROR
r-devel-windows-ix86+x86_64 0.2 12.00 66.00 78.00 ERROR
r-patched-linux-x86_64 0.2 1.75 31.73 33.48 ERROR
r-patched-solaris-x86 0.2 63.40 ERROR
r-release-linux-x86_64 0.2 1.93 32.29 34.22 ERROR
r-release-windows-ix86+x86_64 0.2 6.00 64.00 70.00 ERROR
r-release-osx-x86_64 0.2 OK
r-oldrel-windows-ix86+x86_64 0.2 7.00 58.00 65.00 ERROR
r-oldrel-osx-x86_64 0.2 OK

Check Details

Version: 0.2
Check: examples
Result: ERROR
    Running examples in ‘ebimetagenomics-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: getProjectsList
    > ### Title: Download the EMG projects list into a data frame
    > ### Aliases: getProjectsList
    > ### Keywords: EMG
    >
    > ### ** Examples
    >
    > pl = getProjectsList()
    Warning: non-unique values when setting 'row.names': ‘Apple rhizosphere soil Metagenome’, ‘Arctic soil Metagenome’, ‘BGI Type 2 Diabetes study’, ‘Bacteria Metagenome’, ‘Black soil Targeted Locus (Loci)’, ‘Cheese Targeted Locus (Loci)’, ‘Does dietary mitigation of enteric methane production affect rumen function and animal productivity in dairy cows?’, ‘Effect and mode of action of chitosan and ivy fruit saponins on the microbiota, fermentation and methanogenesis in the rumen simulation technique’, ‘Experimental Metagenome on MinION’, ‘Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils’, ‘Monsoon bacterial diversity of pneumatophore-rhizosphere of Avicennia Marina in vellar estuarine Metagenome’, ‘Retrieval of Commamox genomes using metagenomics’, ‘Rice paddy soil Targeted Locus (Loci)’, ‘Rumen microbiome’, ‘Soil Genome sequencing’, ‘Soil Metagenome’, ‘Soil Random survey’, [... truncated]
    Error in `row.names<-.data.frame`(`*tmp*`, value = value) :
     duplicate 'row.names' are not allowed
    Calls: getProjectsList ... rownames<- -> row.names<- -> row.names<-.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2
Check: examples
Result: ERROR
    Running examples in ‘ebimetagenomics-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: getProjectsList
    > ### Title: Download the EMG projects list into a data frame
    > ### Aliases: getProjectsList
    > ### Keywords: EMG
    >
    > ### ** Examples
    >
    > pl = getProjectsList()
    Warning: non-unique values when setting 'row.names': ‘Apple rhizosphere soil Metagenome’, ‘Arctic soil Metagenome’, ‘BGI Type 2 Diabetes study’, ‘Bacteria Metagenome’, ‘Black soil Targeted Locus (Loci)’, ‘Cheese Targeted Locus (Loci)’, ‘Does dietary mitigation of enteric methane production affect rumen function and animal productivity in dairy cows?’, ‘Effect and mode of action of chitosan and ivy fruit saponins on the microbiota, fermentation and methanogenesis in the rumen simulation technique’, ‘Experimental Metagenome on MinION’, ‘Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils’, ‘Monsoon bacterial diversity of pneumatophore-rhizosphere of Avicennia Marina in vellar estuarine Metagenome’, ‘Retrieval of Commamox genomes using metagenomics’, ‘Rice paddy soil Targeted Locus (Loci)’, ‘Rumen microbiome’, ‘Soil Genome sequencing’, ‘Soil Metagenome’, ‘Soil Random survey’, [... truncated]
    Error in `row.names<-.data.frame`(`*tmp*`, value = value) :
     duplicate 'row.names' are not allowed
    Calls: getProjectsList ... rownames<- -> row.names<- -> row.names<-.data.frame
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86

Version: 0.2
Check: examples
Result: ERROR
    Running examples in 'ebimetagenomics-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: getProjectsList
    > ### Title: Download the EMG projects list into a data frame
    > ### Aliases: getProjectsList
    > ### Keywords: EMG
    >
    > ### ** Examples
    >
    > pl = getProjectsList()
    Warning: non-unique values when setting 'row.names': 'Apple rhizosphere soil Metagenome', 'Arctic soil Metagenome', 'BGI Type 2 Diabetes study', 'Bacteria Metagenome', 'Black soil Targeted Locus (Loci)', 'Cheese Targeted Locus (Loci)', 'Does dietary mitigation of enteric methane production affect rumen function and animal productivity in dairy cows?', 'Effect and mode of action of chitosan and ivy fruit saponins on the microbiota, fermentation and methanogenesis in the rumen simulation technique', 'Experimental Metagenome on MinION', 'Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils', 'Monsoon bacterial diversity of pneumatophore-rhizosphere of Avicennia Marina in vellar estuarine Metagenome', 'Retrieval of Commamox genomes using metagenomics', 'Rice paddy soil Targeted Locus (Loci)', 'Rumen microbiome', 'Soil Genome sequencing', 'Soil Metagenome', 'Soil Random survey', 'Soil Targeted Locus (Loci)', 'Soil samples Targeted Locus (Loci)', [... truncated]
    Error in `row.names<-.data.frame`(`*tmp*`, value = value) :
     duplicate 'row.names' are not allowed
    Calls: getProjectsList ... rownames<- -> row.names<- -> row.names<-.data.frame
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64