CRAN Package Check Results for Maintainer ‘Dirk Eddelbuettel <edd at debian.org>’

Last updated on 2019-10-16 09:52:01 CEST.

Package anytime

Current CRAN status: ERROR: 2, OK: 10

Version: 0.3.6
Check: tests
Result: ERROR
     Running ‘tinytest.R’
    Running the tests in ‘tests/tinytest.R’ failed.
    Complete output:
     >
     > if (requireNamespace("tinytest", quietly=TRUE) &&
     + utils::packageVersion("tinytest") >= "1.0.0") {
     +
     + ## Set a seed to make the test deterministic
     + set.seed(42)
     +
     + ## there are several more granular ways to test files in a tinytest directory,
     + ## see its package vignette; tests can also run once the package is installed
     + ## using the same command `test_package(pkgName)`, or by director or file
     + tinytest::test_package("anytime", ncpu=getOption("Ncpus", 1), side_effects=TRUE)
     + }
     starting worker pid=33439 on localhost:11708 at 17:16:46.126
    
     Exited 'test_all_formats.R' at line 24. Skipping Solaris or Windows or Release
     Running test_all_formats.R............ 0 tests
    
     Running test_assertions.R............. 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Exited 'test_bulk.R' at line 27. Skipping Solaris or Windows or Stupid
     Running test_bulk.R................... 0 tests <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_gh_issue_100.R........... 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_gh_issue_12.R............ 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_gh_issue_33.R............ 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_gh_issue_56.R............ 7 tests <1b>[0;32mOK<1b>[0m
    
     Running test_simple.R................. 34 tests <1b>[0;31m10 fails<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_utilities.R.............. 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
     Error: ----- FAILED[data]: test_simple.R<28--28>
     call| if (!isWindows) expect_equivalent(refT, anytime(20160101L + 0:2,
     call| oldHeuristic = TRUE))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<32--32>
     call| if (!isWindows) expect_equivalent(refT, anytime(20160101 + 0:2,
     call| oldHeuristic = TRUE))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<36--36>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.factor(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<40--40>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.ordered(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<44--44>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.character(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<48--48>
     call| if (!isWindows) expect_equivalent(refT, anytime(c("20160101",
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.6
Check: tests
Result: ERROR
     Running ‘tinytest.R’
    Running the tests in ‘tests/tinytest.R’ failed.
    Complete output:
     >
     > if (requireNamespace("tinytest", quietly=TRUE) &&
     + utils::packageVersion("tinytest") >= "1.0.0") {
     +
     + ## Set a seed to make the test deterministic
     + set.seed(42)
     +
     + ## there are several more granular ways to test files in a tinytest directory,
     + ## see its package vignette; tests can also run once the package is installed
     + ## using the same command `test_package(pkgName)`, or by director or file
     + tinytest::test_package("anytime", ncpu=getOption("Ncpus", 1), side_effects=TRUE)
     + }
     starting worker pid=19385 on localhost:11934 at 20:48:28.683
    
     Exited 'test_all_formats.R' at line 24. Skipping Solaris or Windows or Release
     Running test_all_formats.R............ 0 tests
    
     Running test_assertions.R............. 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Exited 'test_bulk.R' at line 27. Skipping Solaris or Windows or Stupid
     Running test_bulk.R................... 0 tests <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_gh_issue_100.R........... 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_gh_issue_12.R............ 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_gh_issue_33.R............ 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_gh_issue_56.R............ 7 tests <1b>[0;32mOK<1b>[0m
    
     Running test_simple.R................. 34 tests <1b>[0;31m10 fails<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
    
     Running test_utilities.R.............. 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;93m1 side-effects<1b>[0m
     Error: ----- FAILED[data]: test_simple.R<28--28>
     call| if (!isWindows) expect_equivalent(refT, anytime(20160101L + 0:2,
     call| oldHeuristic = TRUE))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<32--32>
     call| if (!isWindows) expect_equivalent(refT, anytime(20160101 + 0:2,
     call| oldHeuristic = TRUE))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<36--36>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.factor(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<40--40>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.ordered(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<44--44>
     call| if (!isWindows) expect_equivalent(refT, anytime(as.character(20160101 +
     call| 0:2)))
     diff| Mean absolute difference: 3600
     ----- FAILED[data]: test_simple.R<48--48>
     call| if (!isWindows) expect_equivalent(refT, anytime(c("20160101",
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Package AsioHeaders

Current CRAN status: OK: 12

Package BH

Current CRAN status: NOTE: 7, OK: 5

Version: 1.69.0-1
Check: installed package size
Result: NOTE
     installed size is 153.5Mb
     sub-directories of 1Mb or more:
     include 153.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package binb

Current CRAN status: OK: 12

Package dang

Current CRAN status: OK: 12

Package digest

Current CRAN status: ERROR: 1, OK: 11

Version: 0.6.21
Check: tests
Result: ERROR
     Running ‘tinytest.R’
    Running the tests in ‘tests/tinytest.R’ failed.
    Complete output:
     >
     > if (requireNamespace("tinytest", quietly=TRUE)) {
     +
     + ## Set a seed to make the test deterministic
     + set.seed(42)
     +
     + ## there are several more granular ways to test files in a
     + ## tinytest directory, see its package vignette; tests can also
     + ## run once the package is installed using the same command
     +
     + ## we need version 0.9.3 or later
     + if (packageVersion("tinytest") >= "0.9.3") {
     + tinytest::test_package("digest")
     + }
     + }
    
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 0 tests
     Running test_aes.R.................... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_aes.R.................... 12 tests <1b>[0;32mOK<1b>[0m
    
     Running test_crc32.R.................. 0 tests
     Running test_crc32.R.................. 0 tests
     Running test_crc32.R.................. 0 tests
     Running test_crc32.R.................. 0 tests
     Running test_crc32.R.................. 0 tests
     Running test_crc32.R.................. 1 tests <1b>[0;32mOK<1b>[0m
     Running test_crc32.R.................. 1 tests <1b>[0;32mOK<1b>[0m
     Running test_crc32.R.................. 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_digest.R................. 0 tests
     Running test_digest.R................. 0 tests
     Running test_digest.R................. 0 tests
     Running test_digest.R................. 7 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 7 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 8 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 9 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 10 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 11 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 12 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 13 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 20 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 20 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 20 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 22 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 22 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 23 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 27 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 27 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 28 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 30 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 30 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 30 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 32 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 32 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 33 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 33 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 34 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 34 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 34 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 37 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 37 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 38 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 38 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 38 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 41 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 41 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 45 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 45 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 46 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 47 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 47 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 47 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 54 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 55 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 55 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 55 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 58 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 59 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 59 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 60 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 61 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 61 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 61 tests <1b>[0;32mOK<1b>[0m
     Running test_digest.R................. 61 tests <1b>[0;32mOK<1b>[0m
     *** caught segfault ***
     address 0x4000000048, cause 'memory not mapped'
    
     Traceback:
     1: digest(fname, length = 18000, algo = alg, serialize = FALSE, file = TRUE)
     2: eval(expr, envir = e)
     3: eval(expr, envir = e)
     4: FUN(X[[i]], ...)
     5: lapply(basename(testfiles), run_test_file, at_home = at_home, verbose = verbose, color = color, remove_side_effects = remove_side_effects, ...)
     6: run_test_dir(testdir, at_home = at_home, cluster = cluster, ...)
     7: tinytest::test_package("digest")
     An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-clang

Package drat

Current CRAN status: OK: 12

Package gaussfacts

Current CRAN status: OK: 12

Package gcbd

Current CRAN status: WARN: 3, NOTE: 6

Version: 0.2.6
Flags: --no-examples --no-tests --no-vignettes
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'gputools'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘gputools’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.2.6
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘gcbd.Rnw’ using Sweave
    Warning in packageDescription("gputools") :
     no package 'gputools' was found
    Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
    at gcbd.Rnw:860, subscript out of bounds
    --- failed re-building ‘gcbd.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘gcbd.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.2.6
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘gcbd.Rnw’ using Sweave
    Warning in packageDescription("gputools") :
     no package 'gputools' was found
    Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
    at gcbd.Rnw:860, subscript out of bounds
    --- failed re-building ‘gcbd.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘gcbd.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.6
Check: re-building of vignette outputs
Result: NOTE
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘gcbd.Rnw’ using Sweave
    Warning in packageDescription("gputools") :
     no package 'gputools' was found
    Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
    at gcbd.Rnw:860, subscript out of bounds
    --- failed re-building ‘gcbd.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘gcbd.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.2.6
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    Warning in packageDescription("gputools") :
     no package 'gputools' was found
    Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
    at gcbd.Rnw:860, subscript out of bounds
    Execution halted
Flavor: r-oldrel-osx-x86_64

Package gettz

Current CRAN status: NOTE: 2, OK: 10

Version: 0.0.3
Check: compiled code
Result: NOTE
    File ‘gettz/libs/gettz.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package gunsales

Current CRAN status: WARN: 2, OK: 10

Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘gunsales.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    sh: line 1: 13995 Trace/BPT trap: 5 /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/x13ashtml /tmp/RtmpZhJtlI/x1336a159a99349/iofile -n -s 2> /dev/null
    dyld: lazy symbol binding failed: Symbol not found: _mkostemp
     Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: _mkostemp
     Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
     Expected in: /usr/lib/libSystem.B.dylib
    
    
    Program received signal SIGTRAP: Trace/breakpoint trap.
    
    Backtrace for this error:
    #0 0x1251da579
    #1 0x1251d9945
    #2 0x7fff9ae44529
    Quitting from lines 33-34 (gunsales.Rmd)
    Error: processing vignette 'gunsales.Rmd' failed with diagnostics:
    X-13 has returned a non-zero exist status, which means that the current spec file cannot be processed for an unknown reason.
    --- failed re-building ‘gunsales.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘gunsales.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    sh: line 1: 29372 Trace/BPT trap: 5 /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/x13ashtml /var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T//RtmpjUDYzi/x13717e8f67458/iofile -n -s 2> /dev/null
    dyld: lazy symbol binding failed: Symbol not found: _mkostemp
     Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: _mkostemp
     Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
     Expected in: /usr/lib/libSystem.B.dylib
    
    
    Program received signal SIGTRAP: Trace/breakpoint trap.
    
    Backtrace for this error:
    #0 0x121f26579
    #1 0x121f25945
    #2 0x7fff93ac4529
    Quitting from lines 33-34 (gunsales.Rmd)
    Error: processing vignette 'gunsales.Rmd' failed with diagnostics:
    X-13 has returned a non-zero exist status, which means that the current spec file cannot be processed for an unknown reason.
    Execution halted
Flavor: r-oldrel-osx-x86_64

Package inline

Current CRAN status: OK: 12

Package linl

Current CRAN status: OK: 12

Package littler

Current CRAN status: OK: 6

Package nanotime

Current CRAN status: OK: 12

Package pinp

Current CRAN status: OK: 12

Package pkgKitten

Current CRAN status: OK: 12

Package prrd

Current CRAN status: OK: 12

Package random

Current CRAN status: OK: 12

Package RApiDatetime

Current CRAN status: OK: 12

Package RApiSerialize

Current CRAN status: OK: 12

Package Rblpapi

Current CRAN status: NOTE: 11

Version: 0.3.10
Check: whether package can be installed
Result: NOTE
    Found the following notes/warnings:
     Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64

Version: 0.3.10
Check: installed package size
Result: NOTE
     installed size is 15.5Mb
     sub-directories of 1Mb or more:
     blp 7.1Mb
     libs 7.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package Rcpp

Current CRAN status: NOTE: 8, OK: 4

Additional issues

gcc-UBSAN

Version: 1.0.2
Check: installed package size
Result: NOTE
     installed size is 15.9Mb
     sub-directories of 1Mb or more:
     doc 2.7Mb
     include 6.4Mb
     libs 4.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0.2
Check: foreign function calls
Result: NOTE
    Registration problem:
     symbol ‘symbol’ in the local frame:
     .Call(symbol)
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package RcppAnnoy

Current CRAN status: NOTE: 3, OK: 9

Additional issues

clang-UBSAN gcc-UBSAN

Version: 0.0.13
Check: installed package size
Result: NOTE
     installed size is 5.2Mb
     sub-directories of 1Mb or more:
     libs 4.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package RcppAPT

Current CRAN status: OK: 9

Package RcppArmadillo

Current CRAN status: NOTE: 7, OK: 5

Version: 0.9.800.1.0
Check: installed package size
Result: NOTE
     installed size is 8.6Mb
     sub-directories of 1Mb or more:
     include 5.9Mb
     libs 1.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package RcppBDT

Current CRAN status: NOTE: 4, OK: 8

Version: 0.2.3
Check: installed package size
Result: NOTE
     installed size is 8.6Mb
     sub-directories of 1Mb or more:
     libs 8.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.2.3
Check: compiled code
Result: NOTE
    File ‘RcppBDT/libs/RcppBDT.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package RcppCCTZ

Current CRAN status: OK: 12

Package RcppClassic

Current CRAN status: WARN: 1, NOTE: 4, OK: 7

Version: 0.9.11
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'RcppClassic-unitTests.html' 'RcppClassic-unitTests.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.9.11
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     WARNING: shared objects/dynamic libraries with hard-coded temporary installation paths
Flavor: r-release-osx-x86_64

Version: 0.9.11
Check: installed package size
Result: NOTE
     installed size is 5.0Mb
     sub-directories of 1Mb or more:
     lib 3.1Mb
     libs 1.5Mb
Flavor: r-release-osx-x86_64

Package RcppClassicExamples

Current CRAN status: OK: 12

Package RcppCNPy

Current CRAN status: WARN: 1, OK: 11

Version: 0.2.10
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘RcppCNPy-intro.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 95-104 (RcppCNPy-intro.Rmd)
    Error: processing vignette 'RcppCNPy-intro.Rmd' failed with diagnostics:
    Python shared library not found, Python bindings not loaded.
    --- failed re-building ‘RcppCNPy-intro.Rmd’
    
    --- re-building ‘UsingReticulate.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 84-94 (UsingReticulate.Rmd)
    Error: processing vignette 'UsingReticulate.Rmd' failed with diagnostics:
    Python shared library not found, Python bindings not loaded.
    --- failed re-building ‘UsingReticulate.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘RcppCNPy-intro.Rmd’ ‘UsingReticulate.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Package RcppDE

Current CRAN status: OK: 12

Additional issues

clang-UBSAN

Package RcppEigen

Current CRAN status: NOTE: 7, OK: 5

Version: 0.3.3.5.0
Check: installed package size
Result: NOTE
     installed size is 32.2Mb
     sub-directories of 1Mb or more:
     include 7.9Mb
     libs 23.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package RcppExamples

Current CRAN status: OK: 12

Package RcppGetconf

Current CRAN status: OK: 9

Package RcppGSL

Current CRAN status: OK: 12

Package RcppMsgPack

Current CRAN status: NOTE: 7, OK: 5

Version: 0.2.3
Check: installed package size
Result: NOTE
     installed size is 10.0Mb
     sub-directories of 1Mb or more:
     include 7.0Mb
     libs 2.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package RcppNLoptExample

Current CRAN status: OK: 12

Package RcppQuantuccia

Current CRAN status: OK: 12

Package RcppRedis

Current CRAN status: OK: 11

Package RcppSMC

Current CRAN status: NOTE: 10, OK: 2

Version: 0.2.1
Check: line endings in C/C++/Fortran sources/headers
Result: NOTE
    Found the following sources/headers not terminated with a newline:
     inst/include/pflineart.h
    Some compilers warn on such files.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64

Version: 0.2.1
Check: installed package size
Result: NOTE
     installed size is 6.5Mb
     sub-directories of 1Mb or more:
     libs 6.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64

Package RcppStreams

Current CRAN status: NOTE: 2, OK: 10

Version: 0.1.3
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     libs 4.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64

Package RcppTOML

Current CRAN status: OK: 12

Package RcppXts

Current CRAN status: NOTE: 12

Version: 0.0.4
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: 'methods'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.0.4
Check: compiled code
Result: NOTE
    File ‘RcppXts/libs/RcppXts.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package RcppZiggurat

Current CRAN status: OK: 12

Additional issues

LTO

Package RDieHarder

Current CRAN status: WARN: 4, OK: 7

Additional issues

valgrind

Version: 0.2.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     bits.c:1247:23: warning: array subscript 8 is outside array bounds of ‘unsigned int[1]’ [-Warray-bounds]
     bits.c:1265:18: warning: array subscript 9 is outside array bounds of ‘unsigned int[1]’ [-Warray-bounds]
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.0
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     skein_block64.c:226:39: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Package rfoaas

Current CRAN status: OK: 12

Package RInside

Current CRAN status: WARN: 1, NOTE: 11

Version: 0.2.15
Check: compiled code
Result: NOTE
    File 'RInside/libs/RInside.so':
     Found 'srand', possibly from 'srand' (C)
     Object: 'RInside.o'
    File 'RInside/libs/RInside.so':
     Found non-API calls to R: 'R_CStackLimit', 'R_CleanTempDir',
     'R_DefParams', 'R_ReplDLLdo1', 'R_ReplDLLinit',
     'R_RunExitFinalizers', 'R_SetParams', 'R_SignalHandlers',
     'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.2.15
Check: compiled code
Result: NOTE
    File ‘RInside/libs/RInside.so’:
     Found ‘srand’, possibly from ‘srand’ (C)
     Object: ‘RInside.o’
    File ‘RInside/libs/RInside.so’:
     Found non-API calls to R: ‘R_CStackLimit’, ‘R_CleanTempDir’,
     ‘R_DefParams’, ‘R_ReplDLLdo1’, ‘R_ReplDLLinit’,
     ‘R_RunExitFinalizers’, ‘R_SetParams’, ‘R_SignalHandlers’,
     ‘R_TempDir’, ‘Rf_endEmbeddedR’, ‘Rf_initEmbeddedR’
    File ‘RInside/libs/RInside.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    Compiled code should not call non-API entry points in R.
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.2.15
Check: installed package size
Result: NOTE
     installed size is 8.8Mb
     sub-directories of 1Mb or more:
     lib 3.5Mb
     libs 4.8Mb
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.15
Check: compiled code
Result: NOTE
    File 'RInside/libs/i386/RInside.dll':
     Found 'srand', possibly from 'srand' (C)
     Object: 'RInside.o'
    File 'RInside/libs/x64/RInside.dll':
     Found 'srand', possibly from 'srand' (C)
     Object: 'RInside.o'
    File 'RInside/libs/i386/libRInside.dll':
     Found 'srand', possibly from 'srand' (C)
     Object: 'RInside.o'
    File 'RInside/libs/x64/libRInside.dll':
     Found 'srand', possibly from 'srand' (C)
     Object: 'RInside.o'
    File 'RInside/libs/i386/RInside.dll':
     Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
     'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
     'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
     'getRUser', 'get_R_HOME'
    File 'RInside/libs/x64/RInside.dll':
     Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
     'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
     'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
     'getRUser', 'get_R_HOME'
    File 'RInside/libs/i386/libRInside.dll':
     Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
     'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
     'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
     'getRUser', 'get_R_HOME'
    File 'RInside/libs/x64/libRInside.dll':
     Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
     'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
     'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
     'getRUser', 'get_R_HOME'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    Compiled code should not call non-API entry points in R.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.15
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     WARNING: shared objects/dynamic libraries with hard-coded temporary installation paths
Flavor: r-release-osx-x86_64

Version: 0.2.15
Check: compiled code
Result: NOTE
    File ‘RInside/libs/RInside.so’:
     Found ‘_srand’, possibly from ‘srand’ (C)
     Object: ‘RInside.o’
    File ‘RInside/libs/RInside.so’:
     Found non-API calls to R: ‘R_CStackLimit’, ‘R_CleanTempDir’,
     ‘R_DefParams’, ‘R_ReplDLLdo1’, ‘R_ReplDLLinit’,
     ‘R_RunExitFinalizers’, ‘R_SetParams’, ‘R_SignalHandlers’,
     ‘R_TempDir’, ‘Rf_endEmbeddedR’, ‘Rf_initEmbeddedR’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    Compiled code should not call non-API entry points in R.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Package rmsfact

Current CRAN status: OK: 12

Package RProtoBuf

Current CRAN status: NOTE: 6, OK: 5

Version: 0.4.14
Check: installed package size
Result: NOTE
     installed size is 10.7Mb
     sub-directories of 1Mb or more:
     doc 1.1Mb
     libs 8.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package RPushbullet

Current CRAN status: OK: 12

Package RQuantLib

Current CRAN status: NOTE: 5, OK: 4

Version: 0.4.10
Check: installed package size
Result: NOTE
     installed size is 27.6Mb
     sub-directories of 1Mb or more:
     libs 27.1Mb
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.4.10
Check: dependencies in R code
Result: NOTE
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Package RVowpalWabbit

Current CRAN status: ERROR: 3, NOTE: 5

Additional issues

gcc-UBSAN

Version: 0.0.13
Check: whether package can be installed
Result: NOTE
    Found the following notes/warnings:
     Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.0.13
Check: top-level files
Result: NOTE
    Found a 'configure.in' file: 'configure.ac' has long been preferred.
     Output from running autoreconf:
     aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in'
     configure.in:22: warning: underquoted definition of AC_PROG_R
     configure.in:22: run info Automake 'Extending aclocal'
     configure.in:22: or see https://www.gnu.org/software/automake/manual/automake.html#Extending-aclocal
     configure.in:86: warning: the serial number must appear before any macro definition
     configure.in:362: warning: the serial number must appear before any macro definition
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.0.13
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package sanitizers

Current CRAN status: NOTE: 2, OK: 10

Version: 0.1.0
Check: compiled code
Result: NOTE
    File ‘sanitizers/libs/sanitizers.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package tint

Current CRAN status: OK: 12

Package ttdo

Current CRAN status: OK: 12

Package x13binary

Current CRAN status: NOTE: 11, OK: 1

Version: 1.1.39-2
Check: whether package can be installed
Result: NOTE
    Found the following notes/warnings:
     Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64

Version: 1.1.39-2
Check: installed package size
Result: NOTE
     installed size is 5.6Mb
     sub-directories of 1Mb or more:
     bin 5.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64