Last updated on 2019-08-18 07:49:16 CEST.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| anytime | 12 | |||
| AsioHeaders | 12 | |||
| BH | 7 | 5 | ||
| binb | 12 | |||
| dang | 12 | |||
| digest | 1 | 11 | ||
| drat | 12 | |||
| gaussfacts | 12 | |||
| gcbd | 3 | 6 | ||
| gettz | 2 | 10 | ||
| gunsales | 2 | 10 | ||
| inline | 12 | |||
| linl | 12 | |||
| littler | 6 | |||
| nanotime | 12 | |||
| pinp | 2 | 10 | ||
| pkgKitten | 12 | |||
| prrd | 12 | |||
| random | 12 | |||
| RApiDatetime | 12 | |||
| RApiSerialize | 12 | |||
| Rblpapi | 11 | |||
| Rcpp | 2 | 6 | 4 | |
| RcppAnnoy | 6 | 6 | ||
| RcppAPT | 9 | |||
| RcppArmadillo | 2 | 6 | 4 | |
| RcppBDT | 4 | 8 | ||
| RcppCCTZ | 12 | |||
| RcppClassic | 3 | 2 | 7 | |
| RcppClassicExamples | 12 | |||
| RcppCNPy | 3 | 9 | ||
| RcppDE | 12 | |||
| RcppEigen | 7 | 5 | ||
| RcppExamples | 2 | 10 | ||
| RcppGetconf | 9 | |||
| RcppGSL | 2 | 10 | ||
| RcppMsgPack | 7 | 5 | ||
| RcppNLoptExample | 12 | |||
| RcppQuantuccia | 1 | 11 | ||
| RcppRedis | 11 | |||
| RcppSMC | 10 | 2 | ||
| RcppStreams | 2 | 10 | ||
| RcppTOML | 12 | |||
| RcppXts | 12 | |||
| RcppZiggurat | 2 | 10 | ||
| RDieHarder | 4 | 7 | ||
| rfoaas | 12 | |||
| RInside | 1 | 11 | ||
| rmsfact | 12 | |||
| RProtoBuf | 2 | 5 | 4 | |
| RPushbullet | 12 | |||
| RQuantLib | 5 | 4 | ||
| RVowpalWabbit | 2 | 6 | ||
| sanitizers | 2 | 10 | ||
| tint | 12 | |||
| x13binary | 11 | 1 |
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: NOTE: 7, OK: 5
Version: 1.69.0-1
Check: installed package size
Result: NOTE
installed size is 153.5Mb
sub-directories of 1Mb or more:
include 153.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: ERROR: 1, OK: 11
Version: 0.6.20
Check: tests
Result: ERROR
Running ‘tinytest.R’
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
>
> if (requireNamespace("tinytest", quietly=TRUE)) {
+
+ ## Set a seed to make the test deterministic
+ set.seed(42)
+
+ ## there are several more granular ways to test files in a
+ ## tinytest directory, see its package vignette; tests can also
+ ## run once the package is installed using the same command
+
+ ## we need version 0.9.3 or later
+ if (packageVersion("tinytest") >= "0.9.3") {
+ tinytest::test_package("digest")
+ }
+ }
Loading required package: digest
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 0 tests
Running test_aes.R.................... 1 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 2 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 3 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 4 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 5 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 6 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 7 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 8 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 9 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 9 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 10 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 11 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 11 tests <1b>[0;32mOK<1b>[0m
Running test_aes.R.................... 12 tests <1b>[0;32mOK<1b>[0m
Running test_crc32.R.................. 0 tests
Running test_crc32.R.................. 0 tests
Running test_crc32.R.................. 0 tests
Running test_crc32.R.................. 0 tests
Running test_crc32.R.................. 0 tests
Running test_crc32.R.................. 1 tests <1b>[0;32mOK<1b>[0m
Running test_crc32.R.................. 1 tests <1b>[0;32mOK<1b>[0m
Running test_crc32.R.................. 2 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 0 tests
Running test_digest.R................. 0 tests
Running test_digest.R................. 0 tests
Running test_digest.R................. 7 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 14 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 14 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 14 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 16 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 18 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 18 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 18 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 20 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 22 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 22 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 22 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 24 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 24 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 25 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 28 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 28 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 28 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 31 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 31 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 31 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 34 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 35 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 35 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 35 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 42 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 45 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 45 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 46 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 46 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 46 tests <1b>[0;32mOK<1b>[0m
Running test_digest.R................. 46 tests <1b>[0;32mOK<1b>[0m
*** caught segfault ***
address 0x4000000048, cause 'memory not mapped'
Traceback:
1: digest(fname, length = 18000, algo = alg, serialize = FALSE, file = TRUE)
2: eval(expr, envir = e)
3: eval(expr, envir = e)
4: run_test_file(file, at_home = at_home, verbose = verbose, color = color, remove_side_effects = remove_side_effects)
5: run_test_dir("./", at_home = at_home, ...)
6: tinytest::test_package("digest")
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-clang
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: WARN: 3, NOTE: 6
Version: 0.2.6
Flags: --no-examples --no-tests --no-vignettes
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'gputools'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.2.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘gputools’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 0.2.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘gcbd.Rnw’ using Sweave
Warning in packageDescription("gputools") :
no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
--- failed re-building ‘gcbd.Rnw’
SUMMARY: processing the following file failed:
‘gcbd.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘gcbd.Rnw’ using Sweave
Warning in packageDescription("gputools") :
no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
--- failed re-building ‘gcbd.Rnw’
SUMMARY: processing the following file failed:
‘gcbd.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.2.6
Check: re-building of vignette outputs
Result: NOTE
Error(s) in re-building vignettes:
...
--- re-building ‘gcbd.Rnw’ using Sweave
Warning in packageDescription("gputools") :
no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
--- failed re-building ‘gcbd.Rnw’
SUMMARY: processing the following file failed:
‘gcbd.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.2.6
Check: re-building of vignette outputs
Result: NOTE
Error in re-building vignettes:
...
Warning in packageDescription("gputools") :
no package 'gputools' was found
Error: processing vignette 'gcbd.Rnw' failed with diagnostics:
at gcbd.Rnw:860, subscript out of bounds
Execution halted
Flavor: r-oldrel-osx-x86_64
Current CRAN status: NOTE: 2, OK: 10
Version: 0.0.3
Check: compiled code
Result: NOTE
File ‘gettz/libs/gettz.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: WARN: 2, OK: 10
Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘gunsales.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
sh: line 1: 13995 Trace/BPT trap: 5 /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/x13ashtml /tmp/RtmpZhJtlI/x1336a159a99349/iofile -n -s 2> /dev/null
dyld: lazy symbol binding failed: Symbol not found: _mkostemp
Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _mkostemp
Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.6/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
Expected in: /usr/lib/libSystem.B.dylib
Program received signal SIGTRAP: Trace/breakpoint trap.
Backtrace for this error:
#0 0x1251da579
#1 0x1251d9945
#2 0x7fff9ae44529
Quitting from lines 33-34 (gunsales.Rmd)
Error: processing vignette 'gunsales.Rmd' failed with diagnostics:
X-13 has returned a non-zero exist status, which means that the current spec file cannot be processed for an unknown reason.
--- failed re-building ‘gunsales.Rmd’
SUMMARY: processing the following file failed:
‘gunsales.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-osx-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
sh: line 1: 29372 Trace/BPT trap: 5 /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/x13ashtml /var/folders/xn/m8dzdsgs7sg8q7jgflnqm8w80000gn/T//RtmpjUDYzi/x13717e8f67458/iofile -n -s 2> /dev/null
dyld: lazy symbol binding failed: Symbol not found: _mkostemp
Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _mkostemp
Referenced from: /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/Rlib/3.5/x13binary/bin/../lib/libgfortran.3.dylib (which was built for Mac OS X 10.12)
Expected in: /usr/lib/libSystem.B.dylib
Program received signal SIGTRAP: Trace/breakpoint trap.
Backtrace for this error:
#0 0x121f26579
#1 0x121f25945
#2 0x7fff93ac4529
Quitting from lines 33-34 (gunsales.Rmd)
Error: processing vignette 'gunsales.Rmd' failed with diagnostics:
X-13 has returned a non-zero exist status, which means that the current spec file cannot be processed for an unknown reason.
Execution halted
Flavor: r-oldrel-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: OK: 6
Current CRAN status: OK: 12
Current CRAN status: WARN: 2, OK: 10
Version: 0.0.7
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘pinp.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'pinp.Rmd' failed with diagnostics:
Failed to compile pinp.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See pinp.log for more info.
--- failed re-building ‘pinp.Rmd’
SUMMARY: processing the following file failed:
‘pinp.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: OK: 12
Current CRAN status: NOTE: 11
Version: 0.3.10
Check: whether package can be installed
Result: NOTE
Found the following notes/warnings:
Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64
Version: 0.3.10
Check: installed package size
Result: NOTE
installed size is 15.5Mb
sub-directories of 1Mb or more:
blp 7.1Mb
libs 7.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Current CRAN status: WARN: 2, NOTE: 6, OK: 4
Version: 1.0.2
Check: installed package size
Result: NOTE
installed size is 15.9Mb
sub-directories of 1Mb or more:
doc 2.7Mb
include 6.4Mb
libs 4.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0.2
Check: foreign function calls
Result: NOTE
Registration problem:
symbol ‘symbol’ in the local frame:
.Call(symbol)
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘Rcpp-FAQ.Rmd’ using rmarkdown
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
Building shared library for Rcpp code chunk...
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-FAQ.Rmd' failed with diagnostics:
Failed to compile Rcpp-FAQ.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-FAQ.log for more info.
--- failed re-building ‘Rcpp-FAQ.Rmd’
--- re-building ‘Rcpp-attributes.Rmd’ using rmarkdown
Warning in get_engine(options$engine) :
Unknown language engine 'cpp' (must be registered via knit_engines$set()).
Warning in get_engine(options$engine) :
Unknown language engine 'cpp' (must be registered via knit_engines$set()).
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-attributes.Rmd' failed with diagnostics:
Failed to compile Rcpp-attributes.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-attributes.log for more info.
--- failed re-building ‘Rcpp-attributes.Rmd’
--- re-building ‘Rcpp-extending.Rmd’ using rmarkdown
Building shared library for Rcpp code chunk...
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-extending.Rmd' failed with diagnostics:
Failed to compile Rcpp-extending.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-extending.log for more info.
--- failed re-building ‘Rcpp-extending.Rmd’
--- re-building ‘Rcpp-introduction.Rmd’ using rmarkdown
Building shared library for Rcpp code chunk...
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-introduction.Rmd' failed with diagnostics:
Failed to compile Rcpp-introduction.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-introduction.log for more info.
--- failed re-building ‘Rcpp-introduction.Rmd’
--- re-building ‘Rcpp-modules.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-modules.Rmd' failed with diagnostics:
Failed to compile Rcpp-modules.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-modules.log for more info.
--- failed re-building ‘Rcpp-modules.Rmd’
--- re-building ‘Rcpp-package.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-package.Rmd' failed with diagnostics:
Failed to compile Rcpp-package.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-package.log for more info.
--- failed re-building ‘Rcpp-package.Rmd’
--- re-building ‘Rcpp-quickref.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-quickref.Rmd' failed with diagnostics:
Failed to compile Rcpp-quickref.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-quickref.log for more info.
--- failed re-building ‘Rcpp-quickref.Rmd’
--- re-building ‘Rcpp-sugar.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'Rcpp-sugar.Rmd' failed with diagnostics:
Failed to compile Rcpp-sugar.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See Rcpp-sugar.log for more info.
--- failed re-building ‘Rcpp-sugar.Rmd’
--- re-building ‘Rcpp-jss-2011.Rnw’ using Sweave
--- finished re-building ‘Rcpp-jss-2011.Rnw’
SUMMARY: processing the following files failed:
‘Rcpp-FAQ.Rmd’ ‘Rcpp-attributes.Rmd’ ‘Rcpp-extending.Rmd’
‘Rcpp-introduction.Rmd’ ‘Rcpp-modules.Rmd’ ‘Rcpp-package.Rmd’
‘Rcpp-quickref.Rmd’ ‘Rcpp-sugar.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 6, OK: 6
Version: 0.0.12
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
'annoy.tree'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.0.12
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
libs 4.7Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64
Current CRAN status: OK: 9
Current CRAN status: WARN: 2, NOTE: 6, OK: 4
Version: 0.9.600.4.0
Check: installed package size
Result: NOTE
installed size is 8.4Mb
sub-directories of 1Mb or more:
include 5.8Mb
libs 1.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.9.600.4.0
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RcppArmadillo-sparseMatrix.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RcppArmadillo-sparseMatrix.Rmd' failed with diagnostics:
Failed to compile RcppArmadillo-sparseMatrix.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RcppArmadillo-sparseMatrix.log for more info.
--- failed re-building ‘RcppArmadillo-sparseMatrix.Rmd’
--- re-building ‘RcppArmadillo-intro.Rnw’ using Sweave
--- finished re-building ‘RcppArmadillo-intro.Rnw’
SUMMARY: processing the following file failed:
‘RcppArmadillo-sparseMatrix.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 4, OK: 8
Version: 0.2.3
Check: installed package size
Result: NOTE
installed size is 8.6Mb
sub-directories of 1Mb or more:
libs 8.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 0.2.3
Check: compiled code
Result: NOTE
File ‘RcppBDT/libs/RcppBDT.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 12
Current CRAN status: WARN: 3, NOTE: 2, OK: 7
Version: 0.9.11
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
'RcppClassic-unitTests.html' 'RcppClassic-unitTests.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.9.11
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RcppClassic-intro.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RcppClassic-intro.Rmd' failed with diagnostics:
Failed to compile RcppClassic-intro.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RcppClassic-intro.log for more info.
--- failed re-building ‘RcppClassic-intro.Rmd’
--- re-building ‘RcppClassic-unitTests.Rnw’ using Sweave
Loading required package: RcppClassic
--- finished re-building ‘RcppClassic-unitTests.Rnw’
SUMMARY: processing the following file failed:
‘RcppClassic-intro.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.9.11
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
WARNING: shared objects/dynamic libraries with hard-coded temporary installation paths
Flavor: r-release-osx-x86_64
Version: 0.9.11
Check: installed package size
Result: NOTE
installed size is 5.0Mb
sub-directories of 1Mb or more:
lib 3.1Mb
libs 1.5Mb
Flavor: r-release-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: WARN: 3, OK: 9
Version: 0.2.10
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RcppCNPy-intro.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RcppCNPy-intro.Rmd' failed with diagnostics:
Failed to compile RcppCNPy-intro.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RcppCNPy-intro.log for more info.
--- failed re-building ‘RcppCNPy-intro.Rmd’
--- re-building ‘UsingReticulate.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'UsingReticulate.Rmd' failed with diagnostics:
Failed to compile UsingReticulate.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See UsingReticulate.log for more info.
--- failed re-building ‘UsingReticulate.Rmd’
SUMMARY: processing the following files failed:
‘RcppCNPy-intro.Rmd’ ‘UsingReticulate.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.10
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘RcppCNPy-intro.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 95-104 (RcppCNPy-intro.Rmd)
Error: processing vignette 'RcppCNPy-intro.Rmd' failed with diagnostics:
Python shared library not found, Python bindings not loaded.
--- failed re-building ‘RcppCNPy-intro.Rmd’
--- re-building ‘UsingReticulate.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 84-94 (UsingReticulate.Rmd)
Error: processing vignette 'UsingReticulate.Rmd' failed with diagnostics:
Python shared library not found, Python bindings not loaded.
--- failed re-building ‘UsingReticulate.Rmd’
SUMMARY: processing the following files failed:
‘RcppCNPy-intro.Rmd’ ‘UsingReticulate.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Current CRAN status: OK: 12
Current CRAN status: NOTE: 7, OK: 5
Version: 0.3.3.5.0
Check: installed package size
Result: NOTE
installed size is 32.2Mb
sub-directories of 1Mb or more:
include 7.9Mb
libs 23.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Current CRAN status: NOTE: 2, OK: 10
Version: 0.1.8
Check: compiled code
Result: NOTE
File ‘RcppExamples/libs/RcppExamples.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 9
Current CRAN status: WARN: 2, OK: 10
Version: 0.3.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RcppGSL-intro.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RcppGSL-intro.Rmd' failed with diagnostics:
Failed to compile RcppGSL-intro.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RcppGSL-intro.log for more info.
--- failed re-building ‘RcppGSL-intro.Rmd’
--- re-building ‘RcppGSL-unitTests.Rnw’ using Sweave
Loading required package: RcppGSL
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 7, OK: 5
Version: 0.2.3
Check: installed package size
Result: NOTE
installed size is 10.0Mb
sub-directories of 1Mb or more:
include 7.0Mb
libs 2.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: WARN: 1, NOTE: 11
Version: 0.0.2
Check: pragmas in C/C++ headers and code
Result: NOTE
Files which contain pragma(s) suppressing diagnostics:
'inst/include/ql/math/distributions/normaldistribution.hpp'
'inst/include/ql/math/matrix.hpp'
'inst/include/ql/math/optimization/levenbergmarquardt.hpp'
'inst/include/ql/math/statistics/incrementalstatistics.hpp'
'inst/include/ql/time/date.hpp' 'inst/include/ql/time/imm.hpp'
'inst/include/ql/utilities/dataparsers.hpp'
'inst/include/ql/utilities/null.hpp'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.0.2
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
../inst/include/ql/math/array.hpp:314:29: warning: 'bind2nd<std::__1::plus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:329:29: warning: 'bind2nd<std::__1::minus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:344:29: warning: 'bind2nd<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:359:29: warning: 'bind2nd<std::__1::divides<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:511:29: warning: 'bind2nd<std::__1::plus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:518:29: warning: 'bind1st<std::__1::plus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:536:29: warning: 'bind2nd<std::__1::minus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:543:29: warning: 'bind1st<std::__1::minus<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:561:29: warning: 'bind2nd<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:568:29: warning: 'bind1st<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:586:29: warning: 'bind2nd<std::__1::divides<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:593:29: warning: 'bind1st<std::__1::divides<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:602:29: warning: 'ptr_fun<double, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:609:29: warning: 'ptr_fun<double, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:616:29: warning: 'ptr_fun<double, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:623:29: warning: 'ptr_fun<double, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:630:31: warning: 'ptr_fun<double, double, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/array.hpp:630:18: warning: 'bind2nd<std::__1::pointer_to_binary_function<double, double, double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:306:29: warning: 'bind2nd<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:312:29: warning: 'bind2nd<std::__1::divides<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:544:29: warning: 'bind2nd<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:551:29: warning: 'bind2nd<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:558:29: warning: 'bind2nd<std::__1::divides<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/timegrid.hpp:63:34: warning: 'ptr_fun<double, double, bool>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/timegrid.hpp:93:34: warning: 'ptr_fun<double, double, bool>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/generallinearleastsquares.hpp:150:18: warning: 'bind1st<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
../inst/include/ql/math/matrix.hpp:636:33: warning: 'bind1st<std::__1::multiplies<double>, double>' is deprecated [-Wdeprecated-declarations]
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.2
Check: installed package size
Result: NOTE
installed size is 16.7Mb
sub-directories of 1Mb or more:
include 8.9Mb
libs 7.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Current CRAN status: OK: 11
Current CRAN status: NOTE: 10, OK: 2
Version: 0.2.1
Check: line endings in C/C++/Fortran sources/headers
Result: NOTE
Found the following sources/headers not terminated with a newline:
inst/include/pflineart.h
Some compilers warn on such files.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64
Version: 0.2.1
Check: installed package size
Result: NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
libs 6.2Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64
Current CRAN status: NOTE: 2, OK: 10
Version: 0.1.3
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
libs 4.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: NOTE: 12
Version: 0.0.4
Check: dependencies in R code
Result: NOTE
Package in Depends field not imported from: 'methods'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.0.4
Check: compiled code
Result: NOTE
File ‘RcppXts/libs/RcppXts.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: WARN: 2, OK: 10
Version: 0.1.5
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RcppZiggurat.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RcppZiggurat.Rmd' failed with diagnostics:
Failed to compile RcppZiggurat.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RcppZiggurat.log for more info.
--- failed re-building ‘RcppZiggurat.Rmd’
SUMMARY: processing the following file failed:
‘RcppZiggurat.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: WARN: 4, OK: 7
Version: 0.2.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
bits.c:1247:23: warning: array subscript 8 is outside array bounds of ‘unsigned int[1]’ [-Warray-bounds]
bits.c:1265:18: warning: array subscript 9 is outside array bounds of ‘unsigned int[1]’ [-Warray-bounds]
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
skein_block64.c:226:39: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Current CRAN status: OK: 12
Current CRAN status: WARN: 1, NOTE: 11
Version: 0.2.15
Check: compiled code
Result: NOTE
File 'RInside/libs/RInside.so':
Found 'srand', possibly from 'srand' (C)
Object: 'RInside.o'
File 'RInside/libs/RInside.so':
Found non-API calls to R: 'R_CStackLimit', 'R_CleanTempDir',
'R_DefParams', 'R_ReplDLLdo1', 'R_ReplDLLinit',
'R_RunExitFinalizers', 'R_SetParams', 'R_SignalHandlers',
'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 0.2.15
Check: compiled code
Result: NOTE
File ‘RInside/libs/RInside.so’:
Found ‘srand’, possibly from ‘srand’ (C)
Object: ‘RInside.o’
File ‘RInside/libs/RInside.so’:
Found non-API calls to R: ‘R_CStackLimit’, ‘R_CleanTempDir’,
‘R_DefParams’, ‘R_ReplDLLdo1’, ‘R_ReplDLLinit’,
‘R_RunExitFinalizers’, ‘R_SetParams’, ‘R_SignalHandlers’,
‘R_TempDir’, ‘Rf_endEmbeddedR’, ‘Rf_initEmbeddedR’
File ‘RInside/libs/RInside.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
Compiled code should not call non-API entry points in R.
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.2.15
Check: installed package size
Result: NOTE
installed size is 8.8Mb
sub-directories of 1Mb or more:
lib 3.5Mb
libs 4.8Mb
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.2.15
Check: compiled code
Result: NOTE
File 'RInside/libs/i386/RInside.dll':
Found 'srand', possibly from 'srand' (C)
Object: 'RInside.o'
File 'RInside/libs/x64/RInside.dll':
Found 'srand', possibly from 'srand' (C)
Object: 'RInside.o'
File 'RInside/libs/i386/libRInside.dll':
Found 'srand', possibly from 'srand' (C)
Object: 'RInside.o'
File 'RInside/libs/x64/libRInside.dll':
Found 'srand', possibly from 'srand' (C)
Object: 'RInside.o'
File 'RInside/libs/i386/RInside.dll':
Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
'getRUser', 'get_R_HOME'
File 'RInside/libs/x64/RInside.dll':
Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
'getRUser', 'get_R_HOME'
File 'RInside/libs/i386/libRInside.dll':
Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
'getRUser', 'get_R_HOME'
File 'RInside/libs/x64/libRInside.dll':
Found non-API calls to R: 'R_CleanTempDir', 'R_DefParams',
'R_ReplDLLdo1', 'R_ReplDLLinit', 'R_RunExitFinalizers',
'R_SetParams', 'R_TempDir', 'Rf_endEmbeddedR', 'Rf_initEmbeddedR',
'getRUser', 'get_R_HOME'
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.2.15
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
WARNING: shared objects/dynamic libraries with hard-coded temporary installation paths
Flavor: r-release-osx-x86_64
Version: 0.2.15
Check: compiled code
Result: NOTE
File ‘RInside/libs/RInside.so’:
Found ‘_srand’, possibly from ‘srand’ (C)
Object: ‘RInside.o’
File ‘RInside/libs/RInside.so’:
Found non-API calls to R: ‘R_CStackLimit’, ‘R_CleanTempDir’,
‘R_DefParams’, ‘R_ReplDLLdo1’, ‘R_ReplDLLinit’,
‘R_RunExitFinalizers’, ‘R_SetParams’, ‘R_SignalHandlers’,
‘R_TempDir’, ‘Rf_endEmbeddedR’, ‘Rf_initEmbeddedR’
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs.
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Current CRAN status: OK: 12
Current CRAN status: WARN: 2, NOTE: 5, OK: 4
Version: 0.4.14
Check: installed package size
Result: NOTE
installed size is 10.7Mb
sub-directories of 1Mb or more:
doc 1.1Mb
libs 8.6Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.4.14
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RProtoBuf-intro.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RProtoBuf-intro.Rmd' failed with diagnostics:
Failed to compile RProtoBuf-intro.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RProtoBuf-intro.log for more info.
--- failed re-building ‘RProtoBuf-intro.Rmd’
--- re-building ‘RProtoBuf-quickref.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RProtoBuf-quickref.Rmd' failed with diagnostics:
Failed to compile RProtoBuf-quickref.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RProtoBuf-quickref.log for more info.
--- failed re-building ‘RProtoBuf-quickref.Rmd’
--- re-building ‘RProtoBuf-paper.Rnw’ using Sweave
Warning in as.integer(2^31 - 1) + as.integer(1) :
NAs produced by integer overflow
--- finished re-building 'RProtoBuf-paper.Rnw'
--- re-building ‘RProtoBuf-unitTests.Rnw’ using Sweave
Loading required package: RProtoBuf
Error in readASCII(tutorial.AddressBook, file(out.file, "rt")) :
summary(input)[["text"]] == "binary" is not TRUE
[libprotobuf ERROR google/protobuf/text_format.cc:324] Error parsing text-format tutorial.AddressBook: 2:1: Message type "tutorial.AddressBook" has no field named "jibberish".
Error in readASCII(tutorial.AddressBook, file(out.file2)) :
Could not parse ASCII protocol buffer.
[libprotobuf ERROR google/protobuf/text_format.cc:324] Error parsing text-format tutorial.AddressBook: 1:1: Expected identifier, got: /
Error in readASCII(tutorial.AddressBook, out.file2) :
Could not parse ASCII protocol buffer from text string. Consider setting partial=TRUE
[libprotobuf ERROR google/protobuf/text_format.cc:328] Error parsing text-format tutorial.Person: Message missing required fields: id
Error in readASCII(x, input, ...) :
Could not parse ASCII protocol buffer.
Error in `$<-`(`*tmp*`, optional_bool, value = NA) :
NA boolean values can not be stored in bool protocol buffer fields
Error in `$<-`(`*tmp*`, optional_bool, value = "100") :
Not compatible with requested type: [type=character; target=logical].
Error in `$<-`(`*tmp*`, optional_bool, value = "invalid") :
Not compatible with requested type: [type=character; target=logical].
Error in `$<-`(`*tmp*`, repeated_bool, value = c("invalid", "invalid")) :
Cannot convert to bool
Error in `$<-`(`*tmp*`, repeated_bool, value = "33-") :
Cannot convert to bool
Error in `$<-`(`*tmp*`, repeated_bool, value = c(TRUE, FALSE, TRUE, NA :
NA boolean values can not be stored in bool protocol buffer fields
Error in as.list(x)[[i]] : subscript out of bounds
Error in .local(x, i, j, ...) : Unknown field
Error in getExtension(x, field, ...) :
getExtension requires a FieldDescriptor
Error in setExtension(x, field, values, ...) :
setExtension requires a FieldDescriptor
Error in getExtension(x, field, ...) :
Field my_extension_string does not match message type ( protobuf_unittest.TestFieldOrderings != protobuf_unittest.TestAllExtensions )
Error in `$<-`(`*tmp*`, optional_int32, value = 1:10) :
cannot set non-repeated field to vector of length > 1
Error in is(values, "Message") :
argument "values" is missing, with no default
[libprotobuf WARNING google/protobuf/compiler/parser.cc:647] No syntax specified for the proto file: /data/gannet/ripley/R/packages/tests-clang/RProtoBuf.Rcheck/RProtoBuf/DESCRIPTION. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
Error in readProtoFiles(system.file("DESCRIPTION", package = "RProtoBuf")) :
Could not load proto file '/data/gannet/ripley/R/packages/tests-clang/RProtoBuf.Rcheck/RProtoBuf/DESCRIPTION'
Error in `$<-`(`*tmp*`, repeated_int32, value = c("invalid", "invalid" :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, repeated_int32, value = "33-") :
Provided character value '33-' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, optional_int32, value = "invalid") :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, optional_uint32, value = "invalid") :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, repeated_int64, value = c("invalid", "invalid" :
Provided character value 'invalid' cannot be cast to 64-bit integer.
Error in `$<-`(`*tmp*`, optional_int64, value = "invalid") :
Provided character value 'invalid' cannot be cast to 64-bit integer.
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 0 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Warning: closing unused connection 11 (/tmp/Rtmpah33da/file33b6565d1dc)
Warning: closing unused connection 10 (/tmp/Rtmpah33da/file33b6565d1dc)
Warning: closing unused connection 9 (/tmp/Rtmpah33da/file33b31579c27)
Warning: closing unused connection 8 (/tmp/Rtmpah33da/file33b31579c27)
Warning: closing unused connection 7 (/tmp/Rtmpah33da/file33b113f97e7)
Warning: closing unused connection 6 (/tmp/Rtmpah33da/file33b113f97e7)
Warning: closing unused connection 5 (/tmp/Rtmpah33da/file33b113f97e7)
Error in .local(object, connection, ascii, refhook) :
object$isInitialized() is not TRUE
Error in .local(object, connection, ascii, refhook) :
object$isInitialized() is not TRUE
--- finished re-building ‘RProtoBuf-unitTests.Rnw’
SUMMARY: processing the following files failed:
‘RProtoBuf-intro.Rmd’ ‘RProtoBuf-quickref.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.4.14
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘RProtoBuf-intro.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RProtoBuf-intro.Rmd' failed with diagnostics:
Failed to compile RProtoBuf-intro.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RProtoBuf-intro.log for more info.
--- failed re-building ‘RProtoBuf-intro.Rmd’
--- re-building ‘RProtoBuf-quickref.Rmd’ using rmarkdown
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
Trying to automatically install missing LaTeX packages...
tlmgr install pgf
tlmgr: package repository http://anorien.csc.warwick.ac.uk/mirrors/CTAN/systems/texlive/tlnet (verified)
tlmgr install: package already present: pgf
tlmgr path add
add_link_dir_dir: /usr/local/share/info/dir exists; not making symlink.
tlmgr search --file --global '/tikzlibrarytopaths.code.tex'
! LaTeX Error: Missing \begin{document}.
Error: processing vignette 'RProtoBuf-quickref.Rmd' failed with diagnostics:
Failed to compile RProtoBuf-quickref.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. See RProtoBuf-quickref.log for more info.
--- failed re-building ‘RProtoBuf-quickref.Rmd’
--- re-building ‘RProtoBuf-paper.Rnw’ using Sweave
Warning in as.integer(2^31 - 1) + as.integer(1) :
NAs produced by integer overflow
--- finished re-building 'RProtoBuf-paper.Rnw'
--- re-building ‘RProtoBuf-unitTests.Rnw’ using Sweave
Loading required package: RProtoBuf
Error in readASCII(tutorial.AddressBook, file(out.file, "rt")) :
summary(input)[["text"]] == "binary" is not TRUE
[libprotobuf ERROR google/protobuf/text_format.cc:307] Error parsing text-format tutorial.AddressBook: 2:1: Message type "tutorial.AddressBook" has no field named "jibberish".
Error in readASCII(tutorial.AddressBook, file(out.file2)) :
Could not parse ASCII protocol buffer.
[libprotobuf ERROR google/protobuf/text_format.cc:307] Error parsing text-format tutorial.AddressBook: 1:1: Expected identifier, got: /
Error in readASCII(tutorial.AddressBook, out.file2) :
Could not parse ASCII protocol buffer from text string. Consider setting partial=TRUE
[libprotobuf ERROR google/protobuf/text_format.cc:312] Error parsing text-format tutorial.Person: Message missing required fields: id
Error in readASCII(x, input, ...) :
Could not parse ASCII protocol buffer.
Error in `$<-`(`*tmp*`, optional_bool, value = NA) :
NA boolean values can not be stored in bool protocol buffer fields
Error in `$<-`(`*tmp*`, optional_bool, value = "100") :
Not compatible with requested type: [type=character; target=logical].
Error in `$<-`(`*tmp*`, optional_bool, value = "invalid") :
Not compatible with requested type: [type=character; target=logical].
Error in `$<-`(`*tmp*`, repeated_bool, value = c("invalid", "invalid")) :
Cannot convert to bool
Error in `$<-`(`*tmp*`, repeated_bool, value = "33-") :
Cannot convert to bool
Error in `$<-`(`*tmp*`, repeated_bool, value = c(TRUE, FALSE, TRUE, NA :
NA boolean values can not be stored in bool protocol buffer fields
Error in as.list(x)[[i]] : subscript out of bounds
Error in .local(x, i, j, ...) : Unknown field
Error in getExtension(x, field, ...) :
getExtension requires a FieldDescriptor
Error in setExtension(x, field, values, ...) :
setExtension requires a FieldDescriptor
Error in getExtension(x, field, ...) :
Field my_extension_string does not match message type ( protobuf_unittest.TestFieldOrderings != protobuf_unittest.TestAllExtensions )
Error in `$<-`(`*tmp*`, optional_int32, value = 1:10) :
cannot set non-repeated field to vector of length > 1
Error in is(values, "Message") :
argument "values" is missing, with no default
[libprotobuf WARNING google/protobuf/compiler/parser.cc:562] No syntax specified for the proto file: /data/gannet/ripley/R/packages/tests-devel/RProtoBuf.Rcheck/RProtoBuf/DESCRIPTION. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.)
Error in readProtoFiles(system.file("DESCRIPTION", package = "RProtoBuf")) :
Could not load proto file '/data/gannet/ripley/R/packages/tests-devel/RProtoBuf.Rcheck/RProtoBuf/DESCRIPTION'
Error in `$<-`(`*tmp*`, repeated_int32, value = c("invalid", "invalid" :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, repeated_int32, value = "33-") :
Provided character value '33-' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, optional_int32, value = "invalid") :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, optional_uint32, value = "invalid") :
Provided character value 'invalid' cannot be cast to 32-bit integer.
Error in `$<-`(`*tmp*`, repeated_int64, value = c("invalid", "invalid" :
Provided character value 'invalid' cannot be cast to 64-bit integer.
Error in `$<-`(`*tmp*`, optional_int64, value = "invalid") :
Provided character value 'invalid' cannot be cast to 64-bit integer.
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 0 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Error in `$<-`(`*tmp*`, repeated_nested_message, value = list(new("Message", :
List element 1 is not a message of the appropriate type ('protobuf_unittest.TestAllTypes.NestedMessage')
Warning: closing unused connection 11 (/tmp/RtmpwYDTOK/file166e6cf2a734)
Warning: closing unused connection 10 (/tmp/RtmpwYDTOK/file166e6cf2a734)
Warning: closing unused connection 9 (/tmp/RtmpwYDTOK/file166e79bbc433)
Warning: closing unused connection 8 (/tmp/RtmpwYDTOK/file166e79bbc433)
Warning: closing unused connection 7 (/tmp/RtmpwYDTOK/file166e6f83152f)
Warning: closing unused connection 6 (/tmp/RtmpwYDTOK/file166e6f83152f)
Warning: closing unused connection 5 (/tmp/RtmpwYDTOK/file166e6f83152f)
Error in .local(object, connection, ascii, refhook) :
object$isInitialized() is not TRUE
Error in .local(object, connection, ascii, refhook) :
object$isInitialized() is not TRUE
--- finished re-building ‘RProtoBuf-unitTests.Rnw’
SUMMARY: processing the following files failed:
‘RProtoBuf-intro.Rmd’ ‘RProtoBuf-quickref.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 12
Current CRAN status: NOTE: 5, OK: 4
Version: 0.4.10
Check: installed package size
Result: NOTE
installed size is 27.6Mb
sub-directories of 1Mb or more:
libs 27.1Mb
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.4.10
Check: dependencies in R code
Result: NOTE
No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Current CRAN status: ERROR: 2, NOTE: 6
Version: 0.0.13
Check: whether package can be installed
Result: NOTE
Found the following notes/warnings:
Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.0.13
Check: top-level files
Result: NOTE
Found a 'configure.in' file: 'configure.ac' has long been preferred.
Output from running autoreconf:
aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in'
configure.in:22: warning: underquoted definition of AC_PROG_R
configure.in:22: run info Automake 'Extending aclocal'
configure.in:22: or see https://www.gnu.org/software/automake/manual/automake.html#Extending-aclocal
configure.in:86: warning: the serial number must appear before any macro definition
configure.in:362: warning: the serial number must appear before any macro definition
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.0.13
Check: installed package size
Result: NOTE
installed size is 24.3Mb
sub-directories of 1Mb or more:
libs 4.6Mb
test 19.6Mb
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.0.13
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Current CRAN status: NOTE: 2, OK: 10
Version: 0.1.0
Check: compiled code
Result: NOTE
File ‘sanitizers/libs/sanitizers.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 12
Current CRAN status: NOTE: 11, OK: 1
Version: 1.1.39-2
Check: whether package can be installed
Result: NOTE
Found the following notes/warnings:
Non-staged installation was used
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64
Version: 1.1.39-2
Check: installed package size
Result: NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
bin 5.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64