CRAN Package Check Results for Package glmpath

Last updated on 2017-07-21 07:46:16.

Check Details

Version: 0.97
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.97
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.97
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     plot.bootpath plot.coxpath plot.glmpath predict.coxpath
     predict.glmpath print.coxpath print.glmpath summary.coxpath
     summary.glmpath
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.97
Check: R code for possible problems
Result: NOTE
    cv.coxpath: no visible global function definition for ‘predict’
    cv.coxpath: no visible binding for global variable ‘var’
    cv.coxpath: no visible global function definition for ‘plot’
    cv.coxpath: no visible global function definition for ‘segments’
    cv.glmpath: no visible binding for global variable ‘binomial’
    cv.glmpath: no visible global function definition for ‘gaussian’
    cv.glmpath: no visible global function definition for ‘binomial’
    cv.glmpath: no visible global function definition for ‘poisson’
    cv.glmpath: no visible global function definition for ‘predict’
    cv.glmpath: no visible binding for global variable ‘var’
    cv.glmpath: no visible global function definition for ‘plot’
    cv.glmpath: no visible global function definition for ‘segments’
    glmpath: no visible binding for global variable ‘binomial’
    glmpath: no visible global function definition for ‘gaussian’
    glmpath: no visible global function definition for ‘binomial’
    glmpath: no visible global function definition for ‘poisson’
    plot.bootpath: no visible global function definition for ‘par’
    plot.bootpath: no visible global function definition for ‘hist’
    plot.bootpath: no visible global function definition for ‘segments’
    plot.bootpath: no visible global function definition for ‘abline’
    plot.bootpath : bpanel: no visible global function definition for
     ‘abline’
    plot.bootpath : bpanel: no visible global function definition for
     ‘points’
    plot.bootpath: no visible global function definition for ‘pairs’
    plot.coxpath: no visible global function definition for ‘par’
    plot.coxpath: no visible global function definition for ‘plot’
    plot.coxpath: no visible global function definition for ‘title’
    plot.coxpath: no visible global function definition for ‘matplot’
    plot.coxpath: no visible global function definition for ‘abline’
    plot.coxpath: no visible global function definition for ‘axis’
    plot.coxpath: no visible global function definition for ‘segments’
    plot.glmpath: no visible global function definition for ‘par’
    plot.glmpath: no visible global function definition for ‘plot’
    plot.glmpath: no visible global function definition for ‘title’
    plot.glmpath: no visible global function definition for ‘matplot’
    plot.glmpath: no visible global function definition for ‘abline’
    plot.glmpath: no visible global function definition for ‘axis’
    plot.glmpath: no visible global function definition for ‘segments’
    predict.coxpath: no visible global function definition for ‘step’
    predict.coxpath: no visible global function definition for ‘approx’
    predict.coxpath: no visible global function definition for ‘coxph’
    predict.glmpath: no visible global function definition for ‘step’
    predict.glmpath: no visible global function definition for ‘approx’
    Undefined global functions or variables:
     abline approx axis binomial coxph gaussian hist matplot pairs par
     plot points poisson predict segments step title var
    Consider adding
     importFrom("graphics", "abline", "axis", "hist", "matplot", "pairs",
     "par", "plot", "points", "segments", "title")
     importFrom("stats", "approx", "binomial", "gaussian", "poisson",
     "predict", "step", "var")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.97
Check: compiled code
Result: NOTE
    File ‘glmpath/libs/glmpath.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64