CRAN Package Check Results for Package glycanr

Last updated on 2017-07-21 23:49:33.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.0 1.37 47.07 48.45 OK
r-devel-linux-x86_64-debian-gcc 0.3.0 1.53 44.19 45.72 OK
r-devel-linux-x86_64-fedora-clang 0.3.0 78.33 OK
r-devel-linux-x86_64-fedora-gcc 0.3.0 72.34 OK
r-devel-windows-ix86+x86_64 0.3.0 9.00 107.00 116.00 OK
r-patched-linux-x86_64 0.3.0 1.44 44.97 46.41 OK
r-patched-solaris-x86 0.3.0 107.40 OK
r-release-linux-x86_64 0.3.0 1.42 45.48 46.90 OK
r-release-windows-ix86+x86_64 0.3.0 9.00 100.00 109.00 OK
r-release-osx-x86_64 0.3.0 ERROR
r-oldrel-windows-ix86+x86_64 0.3.0 9.00 77.00 86.00 OK
r-oldrel-osx-x86_64 0.3.0 OK

Check Details

Version: 0.3.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘preprocessCore’
Flavor: r-release-osx-x86_64

Version: 0.3.0
Check: examples
Result: ERROR
    Running examples in ‘glycanr-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: quantilenorm
    > ### Title: Quantile Normalization of glycan data
    > ### Aliases: quantilenorm
    >
    > ### ** Examples
    >
    > data(mpiu)
    > mpiun <- quantilenorm(mpiu)
    Error in quantilenorm(mpiu) :
     Unable to proceed since package preprocessCore from
     BioConductor is not available on this system. This
     package is a prerequisite to use the quantilenorm function!
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.3.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [2s/3s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     Error in quantilenorm(mpiu, transpose = TRUE) :
     Unable to proceed since package preprocessCore from
     BioConductor is not available on this system. This
     package is a prerequisite to use the quantilenorm function!
     Calls: test_check ... force -> source_file -> eval -> eval -> quantilenorm
     testthat results ================================================================
     OK: 5 SKIPPED: 0 FAILED: 0
     Execution halted
Flavor: r-release-osx-x86_64