CRAN Package Check Results for Package glycanr

Last updated on 2018-06-19 03:52:08 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-oldrel-osx-x86_64 0.3.0 ERROR

Check Details

Version: 0.3.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘preprocessCore’
Flavor: r-oldrel-osx-x86_64

Version: 0.3.0
Check: examples
Result: ERROR
    Running examples in ‘glycanr-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: quantilenorm
    > ### Title: Quantile Normalization of glycan data
    > ### Aliases: quantilenorm
    >
    > ### ** Examples
    >
    > data(mpiu)
    > mpiun <- quantilenorm(mpiu)
    Error in quantilenorm(mpiu) :
     Unable to proceed since package preprocessCore from
     BioConductor is not available on this system. This
     package is a prerequisite to use the quantilenorm function!
    Execution halted
Flavor: r-oldrel-osx-x86_64

Version: 0.3.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [2s/3s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
    
     filter, lag
    
     The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
     Error in quantilenorm(mpiu, transpose = TRUE) :
     Unable to proceed since package preprocessCore from
     BioConductor is not available on this system. This
     package is a prerequisite to use the quantilenorm function!
     Calls: test_check ... force -> source_file -> eval -> eval -> quantilenorm
     testthat results ================================================================
     OK: 5 SKIPPED: 0 FAILED: 0
     Execution halted
Flavor: r-oldrel-osx-x86_64