Last updated on 2020-04-04 04:50:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.21-1 | 5.53 | 109.37 | 114.90 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.4.22 | 4.69 | 82.41 | 87.10 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.4.22 | 146.50 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.22 | 143.32 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.4.22 | 23.00 | 177.00 | 200.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 0.4.21-1 | 12.00 | 97.00 | 109.00 | OK | |
| r-patched-linux-x86_64 | 0.4.22 | 6.36 | 105.56 | 111.92 | OK | |
| r-patched-solaris-x86 | 0.4.22 | 180.70 | OK | |||
| r-release-linux-x86_64 | 0.4.21-1 | 4.57 | 96.80 | 101.37 | WARN | |
| r-release-windows-ix86+x86_64 | 0.4.21-1 | 11.00 | 104.00 | 115.00 | OK | |
| r-release-osx-x86_64 | 0.4.21-1 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.4.21-1 | 7.00 | 127.00 | 134.00 | WARN | |
| r-oldrel-osx-x86_64 | 0.4.21-1 | OK |
Version: 0.4.21-1
Check: tests
Result: ERROR
Running 'testthat.R' [7s/9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(photobiology)
Loading required package: tibble
News at https://www.r4photobiology.info/
> library(photobiologyInOut)
>
> test_check("photobiology")
Read 25 items
Read 12 items
Read 7 items
Read 7 items
Read 7 items
-- 1. Failure: colorSpec (@test-foreign.R#18) ---------------------------------
signif(...) not equal to 38468.75.
1/1 mismatches
[1] 0 - 38469 == -38469
-- 2. Error: colorSpec (@test-foreign.R#25) -----------------------------------
non-numeric argument to mathematical function
Backtrace:
1. testthat::expect_equal(...)
2. testthat::quasi_label(enquo(object), label, arg = "object")
3. rlang::eval_bare(expr, quo_get_env(quo))
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 4 items
Read 151 records
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 3 items
Read 16 items
Read 3 items
Read 16 items
Read 3 items
Read 16 items
Read 3 items
Read 16 items
Read 3 items
Read 16 items
Read 4 items
Read 18 items
Read 3 items
Read 16 items
Read 3 items
Read 16 items
Read 1 item
Read 4 items
Read 1 item
Read 4 items
Read 1 record
Read 1 record
Read 1 record
Read 1 item
Read 1 record
Read 5 items
Read 8 items
Read 8 items
Read 5 items
Read 8 items
Read 8 items
== testthat results ===========================================================
[ OK: 437 | SKIPPED: 4 | WARNINGS: 0 | FAILED: 2 ]
1. Failure: colorSpec (@test-foreign.R#18)
2. Error: colorSpec (@test-foreign.R#25)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.4.21-1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'user-guide.Rmd' using rmarkdown
Loading required package: tibble
News at https://www.r4photobiology.info/
Attaching package: 'lubridate'
The following object is masked from 'package:base':
date
Loading required package: ggplot2
This is colorSpec. Version: 1.2-1. Author: Glenn Davis [aut, cre]. Built: R 4.1.0; ; 2020-04-02
13:32:00 UTC; unix
Attaching package: 'colorSpec'
The following object is masked from 'package:photobiology':
normalize
Welcome to pavo 2! Take a look at the latest features (and update your bibliography) in our recent publication: Maia R., Gruson H., Endler J. A., White T. E. (2019) pavo 2: new tools for the spectral and spatial analysis of colour in R. Methods in Ecology and Evolution, 10, 1097-1107.
Loading required package: lattice
Loading required package: grid
Loading required package: xml2
Package hyperSpec, version 0.99-20200213.1
To get started, try
vignette ("hyperspec")
package?hyperSpec
vignette (package = "hyperSpec")
If you use this package please cite it appropriately.
citation("hyperSpec")
will give you the correct reference.
The project homepage is http://hyperspec.r-forge.r-project.org
Attaching package: 'hyperSpec'
The following object is masked from 'package:colorSpec':
bind
Read 3 items
Read 16 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 3 items
Read 16 items
Read 12 items
Read 4 items
Read 151 records
Read 7 items
Read 7 items
Read 8 items
Read 33 items
Read 33 items
Read 33 items
Read 8 items
Read 159 items
Read 159 items
Read 159 items
Read 5 items
Read 8 items
Read 8 items
Read 5 items
Read 8 items
Read 8 items
Read 1 record
Read 1 record
Read 1 record
Read 1 item
Read 1 record
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 25 items
Quitting from lines 1027-1029 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
Assigned data `c("crown", "throat", "breast")` must be compatible with existing data.
x Existing data has 21 rows.
x Assigned data has 3 rows.
i Only vectors of size 1 are recycled.
--- failed re-building 'user-guide.Rmd'
SUMMARY: processing the following file failed:
'user-guide.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.4.21-1
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘user-guide.Rmd’ using rmarkdown
Loading required package: tibble
News at https://www.r4photobiology.info/
Attaching package: 'lubridate'
The following object is masked from 'package:base':
date
Loading required package: ggplot2
This is colorSpec. Version: 1.2-1. Author: Glenn Davis [aut, cre]. Built: R 3.6.3; ; 2020-04-01
21:20:26 UTC; unix
Attaching package: 'colorSpec'
The following object is masked from 'package:photobiology':
normalize
Welcome to pavo 2! Take a look at the latest features (and update your bibliography) in our recent publication: Maia R., Gruson H., Endler J. A., White T. E. (2019) pavo 2: new tools for the spectral and spatial analysis of colour in R. Methods in Ecology and Evolution, 10, 1097-1107.
Loading required package: lattice
Loading required package: grid
Loading required package: xml2
Package hyperSpec, version 0.99-20200213.1
To get started, try
vignette ("hyperspec")
package?hyperSpec
vignette (package = "hyperSpec")
If you use this package please cite it appropriately.
citation("hyperSpec")
will give you the correct reference.
The project homepage is http://hyperspec.r-forge.r-project.org
Attaching package: 'hyperSpec'
The following object is masked from 'package:colorSpec':
bind
Read 3 items
Read 16 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 3 items
Read 16 items
Read 12 items
Read 4 items
Read 151 records
Read 7 items
Read 7 items
Read 8 items
Read 33 items
Read 33 items
Read 33 items
Read 8 items
Read 159 items
Read 159 items
Read 159 items
Read 5 items
Read 8 items
Read 8 items
Read 5 items
Read 8 items
Read 8 items
Read 1 record
Read 1 record
Read 1 record
Read 1 item
Read 1 record
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 25 items
Quitting from lines 1027-1029 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
Assigned data `c("crown", "throat", "breast")` must be compatible with existing data.
✖ Existing data has 21 rows.
✖ Assigned data has 3 rows.
ℹ Only vectors of size 1 are recycled.
--- failed re-building ‘user-guide.Rmd’
SUMMARY: processing the following file failed:
‘user-guide.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.4.21-1
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Loading required package: tibble
News at https://www.r4photobiology.info/
Attaching package: 'lubridate'
The following object is masked from 'package:base':
date
Loading required package: ggplot2
This is colorSpec. Version: 1.1-1. Author: Glenn Davis [aut, cre]. Built: R 3.5.3; ; 2020-03-31
20:51:14 UTC; windows
Attaching package: 'colorSpec'
The following object is masked from 'package:photobiology':
normalize
Welcome to pavo 2! Take a look at the latest features (and update your bibliography) in our recent publication: Maia R., Gruson H., Endler J. A., White T. E. (2019) pavo 2: new tools for the spectral and spatial analysis of colour in R. Methods in Ecology and Evolution, 10, 1097-1107.
Loading required package: lattice
Loading required package: grid
Package hyperSpec, version 0.99-20180627
To get started, try
vignette ("hyperspec")
package?hyperSpec
vignette (package = "hyperSpec")
If you use this package please cite it appropriately.
citation("hyperSpec")
will give you the correct reference.
The project homepage is http://hyperspec.r-forge.r-project.org
Attaching package: 'hyperSpec'
The following object is masked from 'package:colorSpec':
bind
Read 3 items
Read 16 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 4 items
Read 18 items
Read 3 items
Read 16 items
Read 12 items
Read 4 items
Read 151 records
Read 7 items
Read 7 items
Read 8 items
Read 33 items
Read 33 items
Read 33 items
Read 8 items
Read 159 items
Read 159 items
Read 159 items
Read 5 items
Read 8 items
Read 8 items
Read 5 items
Read 8 items
Read 8 items
Read 1 record
Read 1 record
Read 1 record
Read 1 item
Read 1 record
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 7 items
Read 25 items
Quitting from lines 1027-1029 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
Assigned data `c("crown", "throat", "breast")` must be compatible with existing data.
x Existing data has 21 rows.
x Assigned data has 3 rows.
i Only vectors of size 1 are recycled.
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64