CRAN Package Check Results for Package seqgendiff

Last updated on 2019-09-22 14:47:39 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.1 3.38 156.08 159.46 OK
r-devel-linux-x86_64-debian-gcc 1.1.1 2.59 116.89 119.48 OK
r-devel-linux-x86_64-fedora-clang 1.1.1 191.22 OK
r-devel-linux-x86_64-fedora-gcc 1.1.1 201.61 OK
r-devel-windows-ix86+x86_64 1.1.1 7.00 161.00 168.00 OK
r-patched-linux-x86_64 1.1.1 3.25 159.12 162.37 OK
r-patched-solaris-x86 1.1.1 335.80 OK
r-release-linux-x86_64 1.1.1 3.13 158.50 161.63 OK
r-release-windows-ix86+x86_64 1.1.1 7.00 164.00 171.00 OK
r-release-osx-x86_64 1.1.1 ERROR
r-oldrel-windows-ix86+x86_64 1.1.1 4.00 170.00 174.00 OK
r-oldrel-osx-x86_64 1.1.1 WARN

Check Details

Version: 1.1.1
Check: package dependencies
Result: ERROR
    Packages required but not available: 'sva', 'cate'
    
    Packages suggested but not available for checking:
     'SummarizedExperiment', 'DESeq2', 'airway', 'limma', 'qvalue',
     'edgeR'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 1.1.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘airway’
Flavor: r-oldrel-osx-x86_64

Version: 1.1.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 48-50 (simulate_rnaseq.Rmd)
    Error: processing vignette 'simulate_rnaseq.Rmd' failed with diagnostics:
    there is no package called 'airway'
    Execution halted
Flavor: r-oldrel-osx-x86_64