CRAN Package Check Results for Package tractor.base

Last updated on 2024-02-25 17:50:35 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.3.5.1 10.69 74.39 85.08 ERROR
r-devel-linux-x86_64-debian-gcc 3.3.5.1 9.00 54.20 63.20 ERROR
r-devel-linux-x86_64-fedora-clang 3.3.5.1 109.91 ERROR
r-devel-linux-x86_64-fedora-gcc 3.3.5.1 107.93 ERROR
r-devel-windows-x86_64 3.3.5.1 10.00 75.00 85.00 ERROR
r-patched-linux-x86_64 3.3.5.1 16.47 72.15 88.62 ERROR
r-release-linux-x86_64 3.3.5.1 9.23 71.01 80.24 ERROR
r-release-macos-arm64 3.3.5.1 32.00 OK
r-release-macos-x86_64 3.3.5.1 52.00 OK
r-release-windows-x86_64 3.3.5.1 11.00 84.00 95.00 ERROR
r-oldrel-macos-arm64 3.3.5.1 25.00 OK
r-oldrel-windows-x86_64 3.3.5.1 16.00 82.00 98.00 ERROR

Check Details

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [16s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) Attaching package: 'tractor.base' The following object is masked from 'package:base': %||% > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [11s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) Attaching package: 'tractor.base' The following object is masked from 'package:base': %||% > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [19s/43s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) Attaching package: 'tractor.base' The following object is masked from 'package:base': %||% > > test_check("tractor.base") OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [20s/73s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) Attaching package: 'tractor.base' The following object is masked from 'package:base': %||% > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 117 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 117 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 3.3.5.1
Check: tests
Result: ERROR Running 'testthat.R' [11s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(tractor.base) Attaching package: 'tractor.base' The following object is masked from 'package:base': %||% > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 2 | PASS 113 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • On Windows (1): 'test-30-misc.R:26:5' • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 2 | PASS 113 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [14s/17s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] Error: Test failures Execution halted Flavor: r-patched-linux-x86_64

Version: 3.3.5.1
Check: tests
Result: ERROR Running ‘testthat.R’ [14s/16s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tractor.base) > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 1 | PASS 114 ] Error: Test failures Execution halted Flavor: r-release-linux-x86_64

Version: 3.3.5.1
Check: tests
Result: ERROR Running 'testthat.R' [13s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(tractor.base) > > test_check("tractor.base") [ FAIL 1 | WARN 0 | SKIP 2 | PASS 113 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • On Windows (1): 'test-30-misc.R:26:5' • oro.nifti cannot be loaded (1): 'test-35-coerce.R:29:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-05-files.R:107:5'): we can sort and read DICOM files ─────────── Error in `as(images[[1]], "MriImage")`: no method or default for coercing "divestImage" to "MriImage" Backtrace: ▆ 1. ├─testthat::expect_output(...) at test-05-files.R:107:5 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─testthat::capture_output_lines(code, print, width = width) 5. │ │ └─testthat:::eval_with_output(code, print = print, width = width) 6. │ │ ├─withr::with_output_sink(path, withVisible(code)) 7. │ │ │ └─base::force(code) 8. │ │ └─base::withVisible(code) 9. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 10. └─tractor.base::readDicomDirectory(...) 11. └─methods::as(images[[1]], "MriImage") [ FAIL 1 | WARN 0 | SKIP 2 | PASS 113 ] Error: Test failures Execution halted Flavors: r-release-windows-x86_64, r-oldrel-windows-x86_64