CodelistGenerator: Generate Code Lists for the OMOP Common Data Model

Generate a candidate code list for the Observational Medical Outcomes Partnership (OMOP) common data model based on string matching. For a given search strategy, a candidate code list will be returned.

Version: 2.1.1
Imports: CDMConnector (≥ 1.1.2), checkmate (≥ 2.0.0), DBI (≥ 1.1.0), dplyr (≥ 1.1.0), magrittr (≥ 2.0.0), rlang (≥ 1.0.0), glue (≥ 1.5.0), stringr (≥ 1.4.0), tidyselect (≥ 1.2.0), tidyr (≥ 1.2.0), cli (≥ 3.1.0), purrr, lubridate, PatientProfiles (≥ 0.3.0), RJSONIO
Suggests: arrow (≥ 9.0.0), covr, dbplyr (≥ 2.2.1), knitr, readr (≥ 2.1.0), duckdb, DT, rmarkdown, here (≥ 1.0.0), testthat (≥ 3.0.0), kableExtra (≥ 1.0.0), RPostgres, odbc, spelling, tibble
Published: 2023-11-20
Author: Edward Burn ORCID iD [aut, cre], Marti Catala ORCID iD [ctb]
Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk>
License: Apache License (≥ 2)
URL: https://darwin-eu.github.io/CodelistGenerator/
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: CodelistGenerator results

Documentation:

Reference manual: CodelistGenerator.pdf
Vignettes: 01_Introduction_to_CodelistGenerator
a02_Candidate_codes_OA
03_Options_for_CodelistGenerator
a04_codelists_for_medications

Downloads:

Package source: CodelistGenerator_2.1.1.tar.gz
Windows binaries: r-devel: CodelistGenerator_2.1.1.zip, r-release: CodelistGenerator_2.1.1.zip, r-oldrel: CodelistGenerator_2.1.1.zip
macOS binaries: r-release (arm64): CodelistGenerator_2.1.1.tgz, r-oldrel (arm64): CodelistGenerator_2.1.1.tgz, r-release (x86_64): CodelistGenerator_2.1.1.tgz, r-oldrel (x86_64): CodelistGenerator_2.0.0.tgz
Old sources: CodelistGenerator archive

Reverse dependencies:

Reverse suggests: CohortSurvival, DrugUtilisation, PatientProfiles

Linking:

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