Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See e.g. Valente et al. 2015. Ecology Letters 18: 844-852, <doi:10.1111/ele.12461>.
| Version: | 3.0.1 |
| Depends: | R (≥ 3.5.0) |
| Imports: | deSolve, graphics, stats, utils, DDD (≥ 4.4), subplex, Matrix, tensor, pracma, testit, foreach, doParallel, magrittr, parallel |
| Suggests: | covr, testthat (≥ 2.1.0), knitr, rmarkdown, gridExtra, dplyr, ggplot2, ggtree, tidytree, tidyr, purrr, ape, phytools, tibble |
| Enhances: | doMC |
| Published: | 2020-08-26 |
| Author: | Rampal S. Etienne 
[aut, cre],
Luis Valente
[aut],
Albert B. Phillimore
[aut],
Bart Haegeman
[aut],
Joshua W. Lambert [aut],
Pedro Neves [aut],
Shu Xie [aut],
Richèl J.C. Bilderbeek
[aut],
Torsten Hauffe
[ctb],
Giovanni Laudanno [ctb],
Nadiah Kristensen [ctb],
Raphael Scherrer [ctb] |
| Maintainer: | Rampal S. Etienne <r.s.etienne at rug.nl> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| CRAN checks: | DAISIE results |
| Reference manual: | DAISIE.pdf |
| Vignettes: |
Demo: Fitting clade-specific and island-wide diversity-dependence models in DAISIE Demo optimizing parameters Demo simulating islands |
| Package source: | DAISIE_3.0.1.tar.gz |
| Windows binaries: | r-devel: DAISIE_3.0.1.zip, r-release: DAISIE_3.0.1.zip, r-oldrel: DAISIE_3.0.1.zip |
| macOS binaries: | r-release: DAISIE_3.0.1.tgz, r-oldrel: DAISIE_3.0.1.tgz |
| Old sources: | DAISIE archive |
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