EpiInvert: Incidence Curve Decomposition by Inverting the Renewal Equation

Estimation, by inverting a renewal equation, of time-varying reproduction numbers, 7-day seasonality, and restored incidence curves with festive days bias corrected as described in Alvarez et al. (2021) <doi:10.1073/pnas.2105112118> and Alvarez et al. (2022) <doi:10.3390/biology11040540>. 'EpiInvert' can manage daily incidence data and weekly aggregated incidence data. This version of the package also includes 'EpiInvertForecast', a learning method for the short time forecast of the restored incidence curve.

Version: 0.2.1
Depends: R (≥ 2.10)
Imports: Rcpp (≥ 1.0.8.3)
LinkingTo: Rcpp
Suggests: knitr, ggplot2, grid, dplyr, testthat (≥ 3.0.0), rmarkdown
Published: 2022-10-16
Author: Luis Alvarez ORCID iD [aut, cre], Jean-David Morel ORCID iD [ctb], Jean-Michel Morel ORCID iD [ctb]
Maintainer: Luis Alvarez <lalvarez at ulpgc.es>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/lalvarezmat/EpiInvert
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: EpiInvert results

Documentation:

Reference manual: EpiInvert.pdf

Downloads:

Package source: EpiInvert_0.2.1.tar.gz
Windows binaries: r-devel: EpiInvert_0.2.1.zip, r-release: EpiInvert_0.2.1.zip, r-oldrel: EpiInvert_0.2.1.zip
macOS binaries: r-release (arm64): EpiInvert_0.2.1.tgz, r-oldrel (arm64): EpiInvert_0.2.1.tgz, r-release (x86_64): EpiInvert_0.2.1.tgz, r-oldrel (x86_64): EpiInvert_0.2.1.tgz
Old sources: EpiInvert archive

Linking:

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