ExomeDepth: Calls Copy Number Variants from Targeted Sequence Data

Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.

Version: 1.1.12
Depends: R (≥ 3.4.0)
Imports: Biostrings, IRanges, Rsamtools, GenomicRanges (≥ 1.23.0), aod, VGAM (≥ 0.8.4), methods, GenomicAlignments, dplyr, magrittr
Suggests: knitr
Published: 2019-08-30
Author: Vincent Plagnol [aut, cre]
Maintainer: Vincent Plagnol <v.plagnol at ucl.ac.uk>
License: GPL-3
NeedsCompilation: yes
CRAN checks: ExomeDepth results

Downloads:

Reference manual: ExomeDepth.pdf
Vignettes: ExomeDepth
Package source: ExomeDepth_1.1.12.tar.gz
Windows binaries: r-devel: ExomeDepth_1.1.12.zip, r-devel-gcc8: ExomeDepth_1.1.12.zip, r-release: ExomeDepth_1.1.12.zip, r-oldrel: ExomeDepth_1.1.12.zip
OS X binaries: r-release: not available, r-oldrel: not available
Old sources: ExomeDepth archive

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