IMAGE: Integrated Methylation QTL Mapping and Allele-Specific Analysis

Performs mQTL (methylation quantitative-trait locus) mapping in bisulfite sequencing studies by fitting a binomial mixed model and then incorporating the allelic-specific methylation pattern. Based on Fan, Yue; Vilgalys, Tauras P.; Sun, Shiquan; Peng, Qinke; Tung, Jenny; Zhou, Xiang (2019) <doi:10.1101/615039>.

Version: 1.0
Depends: R (≥ 3.5.0)
Imports: Rcpp (≥ 0.12.19), foreach, doParallel, parallel, Matrix
LinkingTo: Rcpp, RcppArmadillo
Published: 2019-07-28
Author: Xiang Zhou [aut], Shiquan Sun [aut], Yue Fan [aut], Michael Kleinsasser [cre]
Maintainer: Michael Kleinsasser <mkleinsa at>
License: GPL-2
NeedsCompilation: yes
Materials: README
CRAN checks: IMAGE results


Reference manual: IMAGE.pdf
Package source: IMAGE_1.0.tar.gz
Windows binaries: r-devel:, r-devel-UCRT:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): IMAGE_1.0.tgz, r-release (x86_64): IMAGE_1.0.tgz, r-oldrel: IMAGE_1.0.tgz


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