LCMSQA: Liquid Chromatography/Mass Spectrometry (LC/MS) Quality Assessment

The goal of 'LCMSQA' is to make it easy to check the quality of liquid chromatograph/mass spectrometry (LC/MS) experiments using a 'shiny' application. This package provides interactive data visualizations for quality control (QC) samples, including total ion current chromatogram (TIC), base peak chromatogram (BPC), mass spectrum, extracted ion chromatogram (XIC), and feature detection results from internal standards or known metabolites.

Version: 1.0.0
Depends: R (≥ 4.0.0)
Imports: bslib, bsplus, data.table, DT, ggplot2, plotly, shiny, shinycssloaders, shinyjs, shinyWidgets, xcms, MSnbase
Suggests: knitr, rmarkdown
Published: 2023-03-16
Author: Jaehyun Joo [aut, cre], Blanca Himes [aut]
Maintainer: Jaehyun Joo <jaehyunjoo at outlook.com>
License: GPL (≥ 3)
NeedsCompilation: no
Materials: README NEWS
In views: ChemPhys
CRAN checks: LCMSQA results

Documentation:

Reference manual: LCMSQA.pdf
Vignettes: Introduction to LCMSQA

Downloads:

Package source: LCMSQA_1.0.0.tar.gz
Windows binaries: r-devel: LCMSQA_1.0.0.zip, r-release: LCMSQA_1.0.0.zip, r-oldrel: LCMSQA_1.0.0.zip
macOS binaries: r-release (arm64): LCMSQA_1.0.0.tgz, r-oldrel (arm64): LCMSQA_1.0.0.tgz, r-release (x86_64): LCMSQA_1.0.0.tgz, r-oldrel (x86_64): not available

Linking:

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