MAGNAMWAR: A Pipeline for Meta-Genome Wide Association

Correlates variation within the meta-genome to target species phenotype variations in meta-genome with association studies. Follows the pipeline described in Chaston, J.M. et al. (2014) <doi:10.1128/mBio.01631-14>.

Version: 2.0.0
Depends: R (≥ 3.0)
Imports: ape, coxme, doParallel, dplyr, foreach, iterators, lme4, multcomp, parallel, plyr, qqman, survival, seqinr
Suggests: knitr, rmarkdown
Published: 2017-08-28
Author: Corinne Sexton [aut], John Chaston [aut, cre], Hayden Smith [ctb]
Maintainer: John Chaston <john_chaston at byu.edu>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: MAGNAMWAR results

Downloads:

Reference manual: MAGNAMWAR.pdf
Vignettes: Using MAGNAMWAR: a case study with *Drosophila melanogaster*
Package source: MAGNAMWAR_2.0.0.tar.gz
Windows binaries: r-devel: MAGNAMWAR_2.0.0.zip, r-release: MAGNAMWAR_2.0.0.zip, r-oldrel: MAGNAMWAR_2.0.0.zip
OS X El Capitan binaries: r-release: MAGNAMWAR_2.0.0.tgz
OS X Mavericks binaries: r-oldrel: MAGNAMWAR_2.0.0.tgz
Old sources: MAGNAMWAR archive

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