MGDrivE2: Mosquito Gene Drive Explorer 2

A simulation modeling framework which significantly extends capabilities from the 'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets. For more information about 'MGDrivE', see our publication: <https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/2041-210X.13318>. Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations, epidemiological dynamics, time-varying parameters, and a continuous-time simulation framework with various sampling algorithms for both deterministic and stochastic interpretations. 'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we suggest installing that package initially.

Version: 1.0.1
Depends: R (≥ 3.1.0)
Imports: Matrix, deSolve
Suggests: MGDrivE, knitr, rmarkdown, ggplot2
Published: 2020-10-24
Author: Sean L. Wu [aut, cre], Jared B. Bennett [aut], Héctor Manuel Sánchez Castellanos [ctb], Tomás M. León [ctb], Andrew J. Dolgert [ctb], John M. Marshall [aut]
Maintainer: Sean L. Wu <slwood89 at gmail.com>
BugReports: https://github.com/MarshallLab/MGDrivE/issues
License: GPL-3
URL: https://marshalllab.github.io/MGDrivE/, https://www.marshalllab.com/
NeedsCompilation: no
Materials: README NEWS
CRAN checks: MGDrivE2 results

Downloads:

Reference manual: MGDrivE2.pdf
Vignettes: adv-topics
seir-dynamics
epi-network
epi-node
inhomogeneous
lifecycle-network
lifecycle-node
data-analysis
Package source: MGDrivE2_1.0.1.tar.gz
Windows binaries: r-devel: MGDrivE2_1.0.1.zip, r-release: MGDrivE2_1.0.1.zip, r-oldrel: MGDrivE2_1.0.1.zip
macOS binaries: r-release: MGDrivE2_1.0.1.tgz, r-oldrel: MGDrivE2_1.0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=MGDrivE2 to link to this page.