ML.MSBD: Maximum Likelihood Inference on Multi-State Trees

Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani and T. Stadler (2017) <doi:10.1101/215491>.

Version: 1.0.0
Imports: ape (≥ 4.1)
Published: 2017-11-14
Author: Joelle Barido-Sottani [aut, cre]
Maintainer: Joelle Barido-Sottani <joelle.barido-sottani at m4x.org>
License: GPL-3
NeedsCompilation: no
CRAN checks: ML.MSBD results

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Reference manual: ML.MSBD.pdf
Package source: ML.MSBD_1.0.0.tar.gz
Windows binaries: r-devel: ML.MSBD_1.0.0.zip, r-release: ML.MSBD_1.0.0.zip, r-oldrel: ML.MSBD_1.0.0.zip
OS X El Capitan binaries: r-release: ML.MSBD_1.0.0.tgz
OS X Mavericks binaries: r-oldrel: ML.MSBD_1.0.0.tgz

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