Matrix: Sparse and Dense Matrix Classes and Methods

A rich hierarchy of matrix classes, including triangular, symmetric, and diagonal matrices, both dense and sparse and with pattern, logical and numeric entries. Numerous methods for and operations on these matrices, using 'LAPACK' and 'SuiteSparse' libraries.

Version: 1.2-12
Priority: recommended
Depends: R (≥ 3.0.1)
Imports: methods, graphics, grid, stats, utils, lattice
Suggests: expm, MASS
Enhances: MatrixModels, graph, SparseM, sfsmisc
Published: 2017-11-16
Author: Douglas Bates [aut], Martin Maechler [aut, cre], Timothy A. Davis [ctb] (SuiteSparse and 'cs' C libraries, notably CHOLMOD, AMD; collaborators listed in dir(pattern = '^[A-Z]+[.]txt$', full.names=TRUE, system.file('doc', 'SuiteSparse', package='Matrix'))), Jens Oehlschlägel [ctb] (initial nearPD()), Jason Riedy [ctb] (condest() and onenormest() for octave, Copyright: Regents of the University of California), R Core Team [ctb] (base R matrix implementation)
Maintainer: Martin Maechler <mmaechler+Matrix at gmail.com>
Contact: Doug and Martin <Matrix-authors@R-project.org>
License: GPL-2 | GPL-3 | file LICENCE [expanded from: GPL (≥ 2) | file LICENCE]
URL: http://Matrix.R-forge.R-project.org/
NeedsCompilation: yes
Materials: NEWS ChangeLog
In views: Econometrics, Multivariate, NumericalMathematics
CRAN checks: Matrix results

Downloads:

Reference manual: Matrix.pdf
Vignettes: Comparisons of Least Squares calculation speeds
Design Issues in Matrix package Development
2nd Introduction to the Matrix Package
Introduction to the Matrix Package
Sparse Model Matrices
Package source: Matrix_1.2-12.tar.gz
Windows binaries: r-devel: Matrix_1.2-11.zip, r-release: Matrix_1.2-11.zip, r-oldrel: Matrix_1.2-12.zip
OS X El Capitan binaries: r-release: Matrix_1.2-12.tgz
OS X Mavericks binaries: r-oldrel: Matrix_1.2-12.tgz
Old sources: Matrix archive

Reverse dependencies:

Reverse depends: adaptMCMC, adaptsmoFMRI, addhaz, ADDT, ADMMnet, agop, ahaz, AMIAS, APML0, arm, arules, arulesCBA, aster2, BacArena, BayesFactor, bayesGDS, bc3net, BCE, BDgraph, bgsmtr, biglasso, BinNonNor, BinNor, bnstruct, BTLLasso, cAIC4, CAM, camel, centiserve, cgam, cherry, cjoint, climwin, CLSOCP, CompetingRisk, corpustools, covLCA, CoxBoost, Coxnet, cpgen, cplm, crqa, crrp, CRTgeeDR, cthreshER, ctmcmove, CVST, cvxbiclustr, cvxclustr, DAGGER, dataPreparation, dcGOR, dclone, dglars, dhglm, distrom, dmm, DODR, DoubleCone, DRR, dualScale, EMCluster, EMMREML, epistasis, epoc, excursions, expm, FAiR, fanc, fastclime, fda, FENmlm, fExpressCertificates, flare, frailtyHL, FSTpackage, FTICRMS, GAMBoost, gamlr, gamm4, gcdnet, gdistance, GeDS, geeM, genlasso, GenOrd, GeoDE, geostatsp, gettingtothebottom, GHap, glmm, glmnet, gptk, GPvam, GrassmannOptim, growthrate, grpreg, grpregOverlap, gskat, gvcm.cat, gwerAM, hdlm, hglm, hglm.data, HiCfeat, huge, ibmdbR, inarmix, inca, IPMpack, irlba, isotonic.pen, kinship2, klin, largeVis, lassoscore, ldr, lfe, lme4, lmerTest, logcondiscr, LPmerge, LSC, lsgl, mapfit, Matrix.utils, MBC, mclogit, MCMCglmm, mdhglm, MDPtoolbox, mediation, MEET, mefa4, metafor, Metatron, mht, mi, minque, MMS, mosaic, msda, msgl, multiAssetOptions, MultiGHQuad, MultiOrd, MultisiteMediation, MultiVarSel, mvglmmRank, nadiv, NegBinBetaBinreg, netcoh, netgsa, NetworkRiskMeasures, nonlinearTseries, optbdmaeAT, optimbase, optrcdmaeAT, ORDER2PARENT, orderedLasso, OrdNor, PCovR, pedgene, pedigree, pedigreemm, penDvine, penRvine, pense, pETM, phmm, PhylogeneticEM, picasso, PivotalR, pleio, PoisBinNonNor, PoisBinOrd, PoisBinOrdNonNor, PoisBinOrdNor, PoisNonNor, PoisNor, PrevMap, PRISMA, ProbitSpatial, prodest, PROFANCY, qgtools, qlcMatrix, qpcR, QRM, quadrupen, qut, QZ, R2STATS, ramps, randnet, rCUR, RealVAMS, REBayes, recommenderlab, reglogit, REREFACT, RFGLS, RGENERATEPREC, Rmosek, RMRAINGEN, RNewsflow, robustlmm, RSarules, rsggm, rwc, SALES, scpm, sdpt3r, sdwd, sensory, Seurat, sglasso, sglOptim, sGPCA, simglm, snpReady, softImpute, sommer, soptdmaeA, SOR, spacejam, sparsestep, spatialprobit, SpatioTemporal, spdep, speedglm, sSDR, ssfa, StableEstim, SubgrpID, survey, svcm, sybil, sybilccFBA, sybilcycleFreeFlux, sybilEFBA, sybilSBML, systemfit, textir, textmineR, textTinyR, TimeProjection, tmvtnorm, TPEA, TreePar, triversity, ViSiElse, wordspace
Reverse imports: adjclust, ADMM, AICcmodavg, apcluster, apdesign, arc, ArCo, asnipe, automultinomial, bamlss, basefun, bastah, BayesianTools, BayesS5, benchmarkme, Bergm, BeSS, bibliometrix, BigQuic, bigstatsr, BinOrdNonNor, biospear, blockseg, BMhyb, bootnet, BradleyTerryScalable, brglm2, bridgesampling, brms, btergm, btf, BTYD, cape, CatEncoders, CEGO, ChainLadder, chinese.misc, chords, CIAAWconsensus, cleanNLP, CluMix, clustvarsel, CNull, coalescentMCMC, codingMatrices, CollocInfer, colourvision, comato, CompareCausalNetworks, complexplus, cooccurNet, cope, copula, Corbi, CorReg, Countr, covmat, CovTools, coxinterval, coxme, CRF, crisp, Crossover, ctmm, ctsem, Cyclops, DAISIE, Datasmith, DCD, DDD, denoiseR, denseFLMM, DESP, DiffNet, diffusionMap, dmt, dnet, DNMF, doBy, dplR, dr4pl, DRaWR, DrBats, dtwclust, DWLasso, dynr, ECOSolveR, edmcr, EdSurvey, EFDR, effectFusion, Epi, episode, ergm, eRm, eva, evclust, evolqg, expoRkit, ez, face, FactoRizationMachines, fastcox, FastImputation, fastLink, fbar, fdapace, FDboost, FeatureHashing, fGarch, FindIt, flars, FREGAT, FRK, FSInteract, FTRLProximal, funcy, fuser, gcbd, geex, GENLIB, GeomComb, geomorph, GFD, glm.ddR, glmmLasso, glmmsr, glmmTMB, glmnetUtils, gMCP, gmum.r, gnm, goric, graphicalVAR, gRbase, growfunctions, GSCAD, hbm, hbsae, HDCI, HDPenReg, HiCblock, HiCglmi, hierarchicalDS, hierarchicalSets, highriskzone, hisemi, HLMdiag, hmi, HRQoL, hts, icdGLM, igraph, influence.ME, influenceR, Infusion, INLABMA, intercure, iRF, IsingFit, ivmodel, joineRML, kknn, knockoff, LANDD, LassoBacktracking, ldstatsHD, lgcp, LICORS, lime, LMERConvenienceFunctions, lmeresampler, lmvar, lpbrim, LPR, ltmle, ludic, lvnet, madness, MANOVA.RM, marcher, marked, markovchain, MatrixModels, mboost, mcglm, MCMCprecision, mcompanion, medflex, MEGENA, merDeriv, MESS, metafuse, metagear, metaMix, metaSEM, MFKnockoffs, MFPCA, mgcv, micemd, midasr, MIIVsem, miRNAss, misclassGLM, mistral, MixedPsy, MlBayesOpt, mlmm, mltools, mme, Morpho, moult, mRchmadness, msaenet, multibiplotGUI, multimark, MuMIn, mvord, nauf, netCoin, netcom, netdiffuseR, nettools, NetworkToolbox, neuroim, nlmixr, nmfgpu4R, nopaco, NORTARA, nowcasting, oem, OpenMx, optBiomarker, optiSel, optismixture, optiSolve, optrdd, opusminer, ordinal, PBImisc, pbkrtest, PCADSC, PEIP, PenCoxFrail, perARMA, PerFit, pez, phangorn, phia, phylocurve, pi0, pkggraph, Plasmode, PLmixed, polmineR, polycor, polywog, powerlmm, powerplus, prioritizr, PROreg, prozor, pulsar, pvclass, qgraph, qrjoint, qrsvm, quantable, quanteda, quantreg, r2glmm, R2MLwiN, ragt2ridges, randomForest.ddR, randomLCA, ranger, rankFD, raptr, RCMIP5, RcppBlaze, RcppEigen, rdomains, Rdtq, refund, REndo, repolr, ResourceSelection, RevEcoR, RFinfer, rFTRLProximal, RHPCBenchmark, RKEEL, Rlinsolve, rmatio, rmgarch, RMThreshold, robustreg, rodd, ROI.plugin.clp, ROI.plugin.ecos, ROI.plugin.scs, rolypoly, Rphylopars, rpql, RSiena, rsig, RSpectra, RSSL, rstanarm, RVFam, RVPedigree, rWind, rWishart, RxODE, saeRobust, sbfc, scalpel, scam, SCGLR, ScreenClean, scrubr, scs, SemiParSampleSel, seqHMM, seqMeta, SID, simcausal, SimInf, SimMultiCorrData, SISIR, sjstats, slimrec, smam, smart, SMNCensReg, sNPLS, spacom, spaMM, sparsebnUtils, sparseFLMM, sparseHessianFD, sparseMVN, sparsesvd, sparsevar, sparsio, spatgraphs, spatstat, spatsurv, sphet, splm, spmoran, SSN, STB, stm, stocc, stR, strum, superbiclust, surrosurv, surveillance, survival, survivalsvm, survtmle, SwarmSVM, synlik, TANDEM, tensorr, text2vec, themetagenomics, threeboost, tidytext, TMB, tmle.npvi, tmlenet, treeDA, trustOptim, tsDyn, TTCA, tukeytrend, tvR, udpipe, umx, useful, varbvs, varComp, VCA, vennLasso, wfe, widyr, xgboost, XGR, xLLiM, XMRF
Reverse linking to: cplm, geostatsp, irlba, PRIMME, Rmosek, TMB
Reverse suggests: AdaptiveSparsity, afex, blockmodeling, broom, car, CARBayes, cccd, ChoiceModelR, classGraph, corpus, corrgram, cpr, ddR, DGCA, dils, dimRed, discSurv, DoE.MIParray, e1071, ESEA, extraTrees, eyetrackingR, flacco, FSelectorRcpp, funrar, gap, gcKrig, gear, gemtc, gmodels, h2o, hamlet, hdi, HelpersMG, HSAUR, HSAUR2, inlabru, lava, lda, lfactors, LncPath, loe, matrixpls, mefa, mlt.docreg, NCmisc, neat, PAGI, pcalg, pergola, prc, PRIMME, R.matlab, rARPACK, rattle, RcppArmadillo, Rmpfr, rmumps, robustbase, robustvarComp, rope, rstan, scidb, sfsmisc, sirt, solarius, SpaDES.core, spam, sprint, sptm, srvyr, stabledist, STPGA, SweaveListingUtils, tableone, tscount, zenplots
Reverse enhances: coop, OptimalDesign, Rcplex, Rcsdp, Rsymphony, skmeans, slam

Linking:

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