MicroMoB: Discrete Time Simulation of Mosquito-Borne Pathogen Transmission

Provides a framework based on S3 dispatch for constructing models of mosquito-borne pathogen transmission which are constructed from submodels of various components (i.e. immature and adult mosquitoes, human populations). A consistent mathematical expression for the distribution of bites on hosts means that different models (stochastic, deterministic, etc.) can be coherently incorporated and updated over a discrete time step.

Version: 0.0.12
Imports: extraDistr, abind, jsonlite
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), ggplot2, data.table, callr, httr, readr, withr, plumber
Published: 2022-03-17
Author: Sean L. Wu ORCID iD [aut, cre], David L. Smith ORCID iD [aut], Sophie Libkind [ctb]
Maintainer: Sean L. Wu <slwood89 at gmail.com>
BugReports: https://github.com/dd-harp/MicroMoB/issues
License: MIT + file LICENSE
URL: https://dd-harp.github.io/MicroMoB/, https://github.com/dd-harp/MicroMoB
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: MicroMoB results

Documentation:

Reference manual: MicroMoB.pdf
Vignettes: Advanced topics
Beverton-Holt aquatic model
Simple behavioral state mosquito model
Contributing
Queueing model for human superinfection
Micro-MoB (Microsimulation for mosquito-borne pathogens)
Ross-Macdonald mosquito model
Ross-Macdonald transmission model
Blood feeding

Downloads:

Package source: MicroMoB_0.0.12.tar.gz
Windows binaries: r-devel: MicroMoB_0.0.12.zip, r-release: MicroMoB_0.0.12.zip, r-oldrel: MicroMoB_0.0.12.zip
macOS binaries: r-release (arm64): MicroMoB_0.0.12.tgz, r-oldrel (arm64): MicroMoB_0.0.12.tgz, r-release (x86_64): MicroMoB_0.0.12.tgz, r-oldrel (x86_64): MicroMoB_0.0.12.tgz
Old sources: MicroMoB archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=MicroMoB to link to this page.