OpenSpecy: Analyze, Process, Identify, and Share Raman and (FT)IR Spectra
Raman and (FT)IR spectral analysis tool for plastic particles and other environmental samples (Cowger et al. 2021, <doi:10.1021/acs.analchem.1c00123>). Supported features include reading spectral data files (.asp, .csv, .jdx, .spc, .spa, .0), Savitzky-Golay smoothing of spectral intensities with smooth_intens(), correcting background noise with subtr_bg() in accordance with Zhao et al. (2007) <doi:10.1366/000370207782597003>, and identifying spectra using an onboard reference library (Cowger et al. 2020, <doi:10.1177/0003702820929064>). Analyzed spectra can be shared with the Open Specy community. A Shiny app is available via run_app() or online at <https://openanalysis.org/openspecy/>.
| Version: | 0.9.5 |
| Depends: | R (≥ 4.0.0) |
| Imports: | dplyr, rlang, osfr, hyperSpec, hexView, digest, signal, shiny |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0), config, shinyjs, shinythemes, shinyBS, shinyWidgets, ggplot2, plotly, data.table, DT, curl, rdrop2, mongolite, loggit |
| Published: | 2022-07-06 |
| Author: | Win Cowger  [cre,
aut],
Zacharias Steinmetz
[aut],
Andrew Gray [ctb],
Hannah Hapich
[ctb],
Jennifer Lynch
[ctb, dtc],
Hannah De Frond
[ctb, dtc],
Keenan Munno
[ctb, dtc],
Chelsea Rochman
[ctb, dtc],
Sebastian Primpke
[ctb, dtc],
Orestis Herodotou [ctb, dtc] |
| Maintainer: | Win Cowger <wincowger at gmail.com> |
| BugReports: | https://github.com/wincowgerDEV/OpenSpecy-package/issues/ |
| License: | CC BY 4.0 |
| URL: | https://github.com/wincowgerDEV/OpenSpecy-package/ |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | OpenSpecy results |
Documentation:
| Reference manual: | OpenSpecy.pdf |
| Vignettes: |
Standard Operating Procedure |
Downloads:
| Package source: | OpenSpecy_0.9.5.tar.gz |
| Windows binaries: | r-devel: OpenSpecy_0.9.5.zip, r-release: OpenSpecy_0.9.5.zip, r-oldrel: OpenSpecy_0.9.5.zip |
| macOS binaries: | r-release (arm64): OpenSpecy_0.9.5.tgz, r-oldrel (arm64): OpenSpecy_0.9.5.tgz, r-release (x86_64): OpenSpecy_0.9.5.tgz, r-oldrel (x86_64): OpenSpecy_0.9.5.tgz |
| Old sources: | OpenSpecy archive |
Linking:
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