REPTILE: Regulatory DNA Element Prediction

Predicting regulatory DNA elements based on epigenomic signatures. This package is more of a set of building blocks than a direct solution. REPTILE regulatory prediction pipeline is built on this R package. See <https://github.com/yupenghe/REPTILE> for more information.

Version: 1.0
Depends: R (≥ 3.2.2), foreach (≥ 1.4.3), doParallel (≥ 1.0.10)
Imports: optparse (≥ 1.3.2), randomForest (≥ 4.6-12), flux (≥ 0.3-0)
Published: 2016-06-21
Author: Yupeng He
Maintainer: Yupeng He <yupeng.he.bioinfo at gmail.com>
License: BSD_2_clause + file LICENSE
URL: https://github.com/yupenghe/REPTILE
NeedsCompilation: no
CRAN checks: REPTILE results

Downloads:

Reference manual: REPTILE.pdf
Package source: REPTILE_1.0.tar.gz
Windows binaries: r-devel: REPTILE_1.0.zip, r-release: REPTILE_1.0.zip, r-oldrel: REPTILE_1.0.zip
OS X El Capitan binaries: r-release: REPTILE_1.0.tgz
OS X Mavericks binaries: r-oldrel: REPTILE_1.0.tgz

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