If you find this tool useful for your research, please cite Aberer et al. (2013) (underlying algorithm) and, if possible, Smith (2021) (R interface).

Aberer AJ, Krompass D, Stamatakis A (2013). “Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice.” Systematic Biology, 62(1), 162-166. doi: 10.1093/sysbio/sys078.

Smith MR (2021). Rogue: Identify Rogue Taxa in Sets of Phylogenetic Trees. doi: 10.5281/zenodo.5037327.

Corresponding BibTeX entries:

  @Article{,
    title = {Pruning Rogue Taxa Improves Phylogenetic Accuracy: An
      Efficient Algorithm and Webservice},
    author = {Andre J. Aberer and Denis Krompass and Alexandros
      Stamatakis},
    year = {2013},
    doi = {10.1093/sysbio/sys078},
    journal = {Systematic Biology},
    volume = {62},
    pages = {162-166},
    number = {1},
  }
  @Manual{,
    title = {Rogue: Identify Rogue Taxa in Sets of Phylogenetic Trees},
    author = {Martin R. Smith},
    year = {2021},
    doi = {10.5281/zenodo.5037327},
    journal = {Zotero},
  }