ScoreEB: Score Test Integrated with Empirical Bayes for Association Study

Perform association test within linear mixed model framework using score test integrated with Empirical Bayes for genome-wide association study. Firstly, score test was conducted for each marker under linear mixed model framework, taking into account the genetic relatedness and population structure. And then all the potentially associated markers were selected with a less stringent criterion. Finally, all the selected markers were placed into a multi-locus model to identify the true quantitative trait nucleotide.

Version: 0.1.1
Depends: R (≥ 3.5.0)
Imports: data.table
Published: 2021-09-15
Author: Wenlong Ren
Maintainer: Wenlong Ren <wenlongren at ntu.edu.cn>
License: GPL-3
NeedsCompilation: yes
CRAN checks: ScoreEB results

Documentation:

Reference manual: ScoreEB.pdf

Downloads:

Package source: ScoreEB_0.1.1.tar.gz
Windows binaries: r-devel: ScoreEB_0.1.1.zip, r-devel-UCRT: ScoreEB_0.1.1.zip, r-release: ScoreEB_0.1.1.zip, r-oldrel: ScoreEB_0.1.1.zip
macOS binaries: r-release (arm64): ScoreEB_0.1.1.tgz, r-release (x86_64): ScoreEB_0.1.1.tgz, r-oldrel: ScoreEB_0.1.1.tgz
Old sources: ScoreEB archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=ScoreEB to link to this page.