TRAMPR: 'TRFLP' Analysis and Matching Package for R

Matching terminal restriction fragment length polymorphism ('TRFLP') profiles between unknown samples and a database of known samples. 'TRAMPR' facilitates analysis of many unknown profiles at once, and provides tools for working directly with electrophoresis output through to generating summaries suitable for community analyses with R's rich set of statistical functions. 'TRAMPR' also resolves the issues of multiple 'TRFLP' profiles within a species, and shared 'TRFLP' profiles across species.

Version: 1.0-9
Depends: R (≥ 2.4)
Published: 2020-02-28
Author: Rich FitzJohn & Ian Dickie
Maintainer: Rich FitzJohn <rich.fitzjohn at gmail.com>
License: GPL-2
URL: https://github.com/richfitz/TRAMPR
NeedsCompilation: no
Citation: TRAMPR citation info
Materials: README ChangeLog
CRAN checks: TRAMPR results

Documentation:

Reference manual: TRAMPR.pdf
Vignettes: Introduction to TRAMPR

Downloads:

Package source: TRAMPR_1.0-9.tar.gz
Windows binaries: r-devel: TRAMPR_1.0-9.zip, r-release: TRAMPR_1.0-9.zip, r-oldrel: TRAMPR_1.0-9.zip
macOS binaries: r-release (arm64): TRAMPR_1.0-9.tgz, r-release (x86_64): TRAMPR_1.0-9.tgz, r-oldrel: TRAMPR_1.0-9.tgz
Old sources: TRAMPR archive

Linking:

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