WaverideR: Extracting Signals from Wavelet Spectra

The continuous wavelet transform enables the observation of transient/non-stationary cyclicity in time-series. The goal of cyclostratigraphic studies is to define frequency/period in the depth/time domain. By conducting the continuous wavelet transform on cyclostratigraphic data series one can observe and extract cyclic signals/signatures from signals. These results can then be visualized and interpreted enabling one to identify/interpret cyclicity in the geological record, which can be used to construct astrochronological age-models and identify and interpret cyclicity in past and present climate systems. The 'WaverideR' R package builds upon existing literature and existing codebase. The list of articles which are relevant can be grouped in four subjects; cyclostratigraphic data analysis,example data sets,the (continuous) wavelet transform and astronomical solutions. References for the cyclostratigraphic data analysis articles are: Stephen Meyers (2019) <doi:10.1016/j.earscirev.2018.11.015>. Mingsong Li, Linda Hinnov, Lee Kump (2019) <doi:10.1016/j.cageo.2019.02.011> Stephen Meyers (2012)<doi:10.1029/2012PA002307> Mingsong Li, Lee R. Kump, Linda A. Hinnov, Michael E. Mann (2018) <doi:10.1016/j.epsl.2018.08.041>. Wouters, S., Crucifix, M., Sinnesael, M., Da Silva, A.C., Zeeden, C., Zivanovic, M., Boulvain, F., Devleeschouwer, X. (2022) <doi:10.1016/j.earscirev.2021.103894>. Wouters, S., Da Silva, A.-C., Boulvain, F., and Devleeschouwer, X. (2021) <doi:10.32614/RJ-2021-039>. Huang, Norden E., Zhaohua Wu, Steven R. Long, Kenneth C. Arnold, Xianyao Chen, and Karin Blank (2009) <doi:10.1142/S1793536909000096>. Cleveland, W. S. (1979)<doi:10.1080/01621459.1979.10481038> Hurvich, C.M., Simonoff, J.S., and Tsai, C.L. (1998) <doi:10.1111/1467-9868.00125>, Golub, G., Heath, M. and Wahba, G. (1979) <doi:10.2307/1268518>. References for the example data articles are: Damien Pas, Linda Hinnov, James E. (Jed) Day, Kenneth Kodama, Matthias Sinnesael, Wei Liu (2018) <doi:10.1016/j.epsl.2018.02.010>. Steinhilber, Friedhelm, Abreu, Jacksiel, Beer, Juerg , Brunner, Irene, Christl, Marcus, Fischer, Hubertus, HeikkilA, U., Kubik, Peter, Mann, Mathias, Mccracken, K. , Miller, Heinrich, Miyahara, Hiroko, Oerter, Hans , Wilhelms, Frank. (2012 <doi:10.1073/pnas.1118965109>. Christian Zeeden, Frederik Hilgen, Thomas Westerhold, Lucas Lourens, Ursula Röhl, Torsten Bickert (2013) <doi:10.1016/j.palaeo.2012.11.009>. References for the (continuous) wavelet transform articles are: Morlet, Jean, Georges Arens, Eliane Fourgeau, and Dominique Glard (1982a) <doi:10.1190/1.1441328>. J. Morlet, G. Arens, E. Fourgeau, D. Giard (1982b) <doi:10.1190/1.1441329>. Torrence, C., and G. P. Compo (1998)<https://paos.colorado.edu/research/wavelets/bams_79_01_0061.pdf>, Gouhier TC, Grinsted A, Simko V (2021) <https://github.com/tgouhier/biwavelet>. Angi Roesch and Harald Schmidbauer (2018) <https://CRAN.R-project.org/package=WaveletComp>. Russell, Brian, and Jiajun Han (2016)<https://www.crewes.org/Documents/ResearchReports/2016/CRR201668.pdf>. Gabor, Dennis (1946) <http://genesis.eecg.toronto.edu/gabor1946.pdf>. J. Laskar, P. Robutel, F. Joutel, M. Gastineau, A.C.M. Correia, and B. Levrard, B. (2004) <doi:10.1051/0004-6361:20041335>. Laskar, J., Fienga, A., Gastineau, M., Manche, H. (2011a) <doi:10.1051/0004-6361/201116836>. References for the astronomical solutions articles are: Laskar, J., Gastineau, M., Delisle, J.-B., Farres, A., Fienga, A. (2011b <doi:10.1051/0004-6361/201117504>. J. Laskar (2019) <doi:10.1016/B978-0-12-824360-2.00004-8>. Zeebe, Richard E (2017) <doi:10.3847/1538-3881/aa8cce>. Zeebe, R. E. and Lourens, L. J. (2019) <doi:10.1016/j.epsl.2022.117595>. Richard E. Zeebe Lucas J. Lourens (2022) <doi:10.1126/science.aax0612>.

Version: 0.3.2
Depends: R (≥ 3.5.0)
Imports: DecomposeR, DescTools, Hmisc, Matrix, utils, colorednoise, doSNOW, fANCOVA, foreach, stats, tcltk, matrixStats, reshape2, truncnorm, grDevices, graphics, parallel, astrochron, biwavelet, WaveletComp, RColorBrewer, colorRamps, viridis, magick, rlist
Suggests: testthat (≥ 3.0.0)
Published: 2023-09-06
Author: Michiel Arts [aut, cre]
Maintainer: Michiel Arts <michiel.arts at stratigraphy.eu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/stratigraphy/WaverideR
NeedsCompilation: no
Materials: README NEWS
CRAN checks: WaverideR results

Documentation:

Reference manual: WaverideR.pdf

Downloads:

Package source: WaverideR_0.3.2.tar.gz
Windows binaries: r-devel: WaverideR_0.3.2.zip, r-release: WaverideR_0.3.2.zip, r-oldrel: WaverideR_0.3.2.zip
macOS binaries: r-release (arm64): WaverideR_0.3.2.tgz, r-oldrel (arm64): WaverideR_0.3.2.tgz, r-release (x86_64): WaverideR_0.3.2.tgz
Old sources: WaverideR archive

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