Available CRAN Packages By Date of Publication

Date	Package	Title
2018-08-28	bhrcr	Bayesian Hierarchical Regression on Clearance Rates in the Presence of Lag and Tail Phases
2018-08-28	clusterlab	Flexible Gaussian Cluster Simulator
2018-08-28	cwhmisc	Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2018-08-28	cytometree	Automated Cytometry Gating and Annotation
2018-08-28	epitrix	Small Helpers and Tricks for Epidemics Analysis
2018-08-28	fingerPro	Sediment Source Fingerprinting
2018-08-28	FLSSS	Mining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems
2018-08-28	frailtySurv	General Semiparametric Shared Frailty Model
2018-08-28	geoelectrics	3D-Visualization of Geoelectric Resistivity Measurement Profiles
2018-08-28	GetDFPData	Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System
2018-08-28	gets	General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2018-08-28	gmapsdistance	Distance and Travel Time Between Two Points from Google Maps
2018-08-28	HextractoR	Integrated Tool for Hairping Extraction of RNA Sequences
2018-08-28	mBvs	Bayesian Variable Selection Methods for Multivariate Data
2018-08-28	metacoder	Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
2018-08-28	mlr	Machine Learning in R
2018-08-28	PAFit	Generative Mechanism Estimation in Temporal Complex Networks
2018-08-28	plsdof	Degrees of Freedom and Statistical Inference for Partial Least Squares Regression
2018-08-28	plsRbeta	Partial Least Squares Regression for Beta Regression Models
2018-08-28	PoweR	Computation of Power and Level Tables for Hypothesis Tests
2018-08-28	ratelimitr	Rate Limiting for R
2018-08-28	recmap	Compute the Rectangular Statistical Cartogram
2018-08-28	relsurv	Relative Survival
2018-08-28	rmapzen	Client for 'Mapzen' and Related Map APIs
2018-08-28	rtypeform	Interface to 'typeform' Results
2018-08-28	SSLASSO	The Spike-and-Slab LASSO
2018-08-28	Tariff	Replicate Tariff Method for Verbal Autopsy
2018-08-28	ZIM	Zero-Inflated Models (ZIM) for Count Time Series with Excess Zeros
2018-08-27	auditor	Model Audit - Verification, Validation, and Error Analysis
2018-08-27	CalibratR	Mapping ML Scores to Calibrated Predictions
2018-08-27	calpassapi	R Interface to Access CalPASS API
2018-08-27	cloudml	Interface to the Google Cloud Machine Learning Platform
2018-08-27	CMatching	Matching Algorithms for Causal Inference with Clustered Data
2018-08-27	coalitions	Coalition Probabilities in Multi-Party Democracies
2018-08-27	eDMA	Dynamic Model Averaging with Grid Search
2018-08-27	enveomics.R	Various Utilities for Microbial Genomics and Metagenomics
2018-08-27	eplusr	A Toolkit for Using Whole Building Simulation Program 'EnergyPlus'
2018-08-27	finalfit	Quickly Create Elegant Regression Results Tables and Plots when Modelling
2018-08-27	FishResp	Analytical Tool for Aquatic Respirometry
2018-08-27	flextable	Functions for Tabular Reporting
2018-08-27	georob	Robust Geostatistical Analysis of Spatial Data
2018-08-27	languageserver	Language Server Protocol
2018-08-27	leaflet	Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2018-08-27	madness	Automatic Differentiation of Multivariate Operations
2018-08-27	MCMCvis	Tools to Visualize, Manipulate, and Summarize MCMC Output
2018-08-27	miceMNAR	Missing not at Random Imputation Models for Multiple Imputation by Chained Equation
2018-08-27	multicolor	Add Multiple Colors to your Console Output
2018-08-27	MXM	Feature Selection (Including Multiple Solutions) and Bayesian Networks
2018-08-27	pdp	Partial Dependence Plots
2018-08-27	prob	Elementary Probability on Finite Sample Spaces
2018-08-27	projections	Project Future Case Incidence
2018-08-27	R.utils	Various Programming Utilities
2018-08-27	RRreg	Correlation and Regression Analyses for Randomized Response Data
2018-08-27	tfestimators	Interface to 'TensorFlow' Estimators
2018-08-27	tidycensus	Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames
2018-08-27	vpc	Create Visual Predictive Checks
2018-08-26	bgsmtr	Bayesian Group Sparse Multi-Task Regression
2018-08-26	ebimetagenomics	EBI Metagenomics Portal
2018-08-26	funique	A Faster Unique Function
2018-08-26	future.apply	Apply Function to Elements in Parallel using Futures
2018-08-26	gimme	Group Iterative Multiple Model Estimation
2018-08-26	GPRMortality	Gaussian Process Regression for Mortality Rates
2018-08-26	JWileymisc	Miscellaneous Utilities and Functions
2018-08-26	mclustcomp	Measures for Comparing Clusters
2018-08-26	mlVAR	Multi-Level Vector Autoregression
2018-08-26	plotrix	Various Plotting Functions
2018-08-26	R.rsp	Dynamic Generation of Scientific Reports
2018-08-26	rscorecard	A Method to Download Department of Education College Scorecard Data
2018-08-26	sspse	Estimating Hidden Population Size using Respondent Driven Sampling Data
2018-08-26	supc	The Self-Updating Process Clustering Algorithms
2018-08-25	coopProductGame	Cooperative Aspects of Linear Production Programming Problems
2018-08-25	crawl	Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2018-08-25	DesignLibrary	Library of Research Designs
2018-08-25	ergm.count	Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
2018-08-25	ergm.rank	Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data
2018-08-25	ergm.userterms	User-specified Terms for the statnet Suite of Packages
2018-08-25	flip	Multivariate Permutation Tests
2018-08-25	globals	Identify Global Objects in R Expressions
2018-08-25	graphTweets	Visualise Twitter Interactions
2018-08-25	hydroscoper	Interface to the Greek National Data Bank for Hydrometeorological Information
2018-08-25	latentnet	Latent Position and Cluster Models for Statistical Networks
2018-08-25	mrMLM	Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study
2018-08-25	mrMLM.GUI	Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study
2018-08-25	ordinal	Regression Models for Ordinal Data
2018-08-25	pracma	Practical Numerical Math Functions
2018-08-25	PRIMsrc	PRIM Survival Regression Classification
2018-08-25	smooth	Forecasting Using State Space Models
2018-08-25	startup	Friendly R Startup Configuration
2018-08-25	strvalidator	Process Control and Internal Validation of Forensic STR Kits
2018-08-25	switchr	Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2018-08-25	symDMatrix	Partitioned Symmetric Matrices
2018-08-25	TeXCheckR	Parses LaTeX Documents for Errors
2018-08-25	tfdatasets	Interface to 'TensorFlow' Datasets
2018-08-25	tfruns	Training Run Tools for 'TensorFlow'
2018-08-24	accelerometry	Functions for Processing Accelerometer Data
2018-08-24	adiv	Analysis of Diversity
2018-08-24	arrangements	Fast Generators and Iterators for Permutations, Combinations and Partitions
2018-08-24	bacistool	Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials
2018-08-24	bamdit	Bayesian Meta-Analysis of Diagnostic Test Data
2018-08-24	BGData	A Suite of Packages for Analysis of Big Genomic Data
2018-08-24	BGLR	Bayesian Generalized Linear Regression
2018-08-24	binGroup	Evaluation and Experimental Design for Binomial Group Testing
2018-08-24	BiocManager	Access the Bioconductor Project Package Repository
2018-08-24	BMRBr	'BMRB' File Downloader
2018-08-24	btergm	Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2018-08-24	callr	Call R from R
2018-08-24	CrossVA	Verbal Autopsy Data Transform for Use with Various Coding Algorithms
2018-08-24	depmixS4	Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
2018-08-24	dr4pl	Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model
2018-08-24	ggthemes	Extra Themes, Scales and Geoms for 'ggplot2'
2018-08-24	gmvarkit	Estimate Gaussian Mixture Vector Autoregressive Model
2018-08-24	gsynth	Generalized Synthetic Control Method
2018-08-24	iC10TrainingData	Training Datasets for iC10 Package
2018-08-24	incidence	Compute, Handle, Plot and Model Incidence of Dated Events
2018-08-24	iotables	Importing and Manipulating Symmetric Input-Output Tables
2018-08-24	keras	R Interface to 'Keras'
2018-08-24	krige	Geospatial Kriging with Metropolis Sampling
2018-08-24	littler	R at the Command-Line via 'r'
2018-08-24	lucid	Printing Floating Point Numbers in a Human-Friendly Format
2018-08-24	MoEClust	Gaussian Parsimonious Clustering Models with Covariates
2018-08-24	MRFcov	Markov Random Fields with Additional Covariates
2018-08-24	mvglmmRank	Multivariate Generalized Linear Mixed Models for Ranking Sports Teams
2018-08-24	NAM	Nested Association Mapping
2018-08-24	ncappc	NCA Calculations and Population Model Diagnosis
2018-08-24	optiSel	Optimum Contribution Selection and Population Genetics
2018-08-24	perccalc	Estimate Percentiles from an Ordered Categorical Variable
2018-08-24	plsgenomics	PLS Analyses for Genomics
2018-08-24	polymapR	Linkage Analysis in Outcrossing Polyploids
2018-08-24	portfolio.optimization	Contemporary Portfolio Optimization
2018-08-24	quickmatch	Quick Generalized Full Matching
2018-08-24	RcmdrPlugin.NMBU	R Commander Plug-in for University Level Applied Statistics
2018-08-24	REAT	Regional Economic Analysis Toolbox
2018-08-24	robeth	R Functions for Robust Statistics
2018-08-24	roperators	Additional Operators to Help you Write Cleaner R Code
2018-08-24	RTest	A XML-Based Testing Framework for Automated Component Tests of R Packages
2018-08-24	rtrim	Trends and Indices for Monitoring Data
2018-08-24	scclust	Size-Constrained Clustering
2018-08-24	stepPenal	Stepwise Forward Variable Selection in Penalized Regression
2018-08-24	STMotif	Discovery of Motifs in Spatial-Time Series
2018-08-24	survxai	Visualization of the Local and Global Survival Model Explanations
2018-08-24	tidytidbits	A Collection of Tools and Helpers Extending the Tidyverse
2018-08-24	twl	Two-Way Latent Structure Clustering Model
2018-08-24	twoway	Analysis of Two-Way Tables
2018-08-24	wordcloud	Word Clouds
2018-08-24	xergm	Extensions of Exponential Random Graph Models
2018-08-24	xRing	Visualization and Correction of X-Ray Micro-Density Profiles
2018-08-23	ars	Adaptive Rejection Sampling
2018-08-23	BLR	Bayesian Linear Regression
2018-08-23	brnn	Bayesian Regularization for Feed-Forward Neural Networks
2018-08-23	car	Companion to Applied Regression
2018-08-23	cgmanalysis	Clean and Analyze Continuous Glucose Monitor Data
2018-08-23	chebpol	Multivariate Interpolation
2018-08-23	CINNA	Deciphering Central Informative Nodes in Network Analysis
2018-08-23	coxed	Duration-Based Quantities of Interest for the Cox Proportional Hazards Model
2018-08-23	DataPackageR	Construct Reproducible Analytic Data Sets as R Packages
2018-08-23	Epi	A Package for Statistical Analysis in Epidemiology
2018-08-23	essurvey	Download Data from the European Social Survey on the Fly
2018-08-23	fabricatr	Imagine Your Data Before You Collect It
2018-08-23	fergm	Estimation and Fit Assessment of Frailty Exponential Random Graph Models
2018-08-23	fixerapi	An R Client for the "Fixer.io" Currency API
2018-08-23	fs	Cross-Platform File System Operations Based on 'libuv'
2018-08-23	ftsa	Functional Time Series Analysis
2018-08-23	IndepTest	Nonparametric Independence Tests Based on Entropy Estimation
2018-08-23	kerasformula	A High-Level R Interface for Neural Nets
2018-08-23	link2GI	Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools
2018-08-23	manet	Multiple Allocation Model for Actor-Event Networks
2018-08-23	markovchain	Easy Handling Discrete Time Markov Chains
2018-08-23	MetFns	Analysis of Visual Meteor Data
2018-08-23	micemd	Multiple Imputation by Chained Equations with Multilevel Data
2018-08-23	PNADcIBGE	Downloading, Reading and Analysing PNADc Microdata
2018-08-23	predictmeans	Calculate Predicted Means for Linear Models
2018-08-23	psychmeta	Psychometric Meta-Analysis Toolkit
2018-08-23	Rdistance	Analyses for Distance-Sampling and Abundance Estimation
2018-08-23	roahd	Robust Analysis of High Dimensional Data
2018-08-23	rtide	Tide Heights
2018-08-23	sarima	Simulation and Prediction with Seasonal ARIMA Models
2018-08-23	sjPlot	Data Visualization for Statistics in Social Science
2018-08-23	sparseinv	Computation of the Sparse Inverse Subset
2018-08-23	stability	Stability Analysis of Genotype by Environment Interaction (GEI)
2018-08-23	TBFmultinomial	TBF Methodology Extension for Multinomial Outcomes
2018-08-23	xmlrpc2	Implementation of the Remote Procedure Call Protocol ('XML-RPC')
2018-08-22	BayesNetBP	Bayesian Network Belief Propagation
2018-08-22	BioInstaller	Integrator of Bioinformatics Resources
2018-08-22	ClusterR	Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans and K-Medoids Clustering
2018-08-22	collapsibleTree	Interactive Collapsible Tree Diagrams using 'D3.js'
2018-08-22	digest	Create Compact Hash Digests of R Objects
2018-08-22	DoE.base	Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2018-08-22	Eagle	Multiple Locus Association Mapping on a Genome-Wide Scale
2018-08-22	eikosograms	The Picture of Probability
2018-08-22	epiR	Tools for the Analysis of Epidemiological Data
2018-08-22	geoknife	Web-Processing of Large Gridded Datasets
2018-08-22	geometa	Tools for Reading and Writing ISO/OGC Geographic Metadata
2018-08-22	ggtern	An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2018-08-22	GMSE	Generalised Management Strategy Evaluation Simulator
2018-08-22	GSED	Group Sequential Enrichment Design
2018-08-22	hedgehog	Property-Based Testing
2018-08-22	highSCREEN	High-Throughput Screening for Plate Based Assays
2018-08-22	lfe	Linear Group Fixed Effects
2018-08-22	lidR	Airborne LiDAR Data Manipulation and Visualization for Forestry Applications
2018-08-22	LLSR	Data Analysis of Liquid-Liquid Systems
2018-08-22	lmridge	Linear Ridge Regression with Ridge Penalty and Ridge Statistics
2018-08-22	mboost	Model-Based Boosting
2018-08-22	meteoland	Landscape Meteorology Tools
2018-08-22	microsamplingDesign	Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis
2018-08-22	Miso	Multi-Isotope Labeling for Metabolomics Analysis
2018-08-22	OpenImageR	An Image Processing Toolkit
2018-08-22	phenocamr	Facilitates 'PhenoCam' Data Access and Time Series Post-Processing
2018-08-22	poppr	Genetic Analysis of Populations with Mixed Reproduction
2018-08-22	pseudorank	Pseudo-Ranks
2018-08-22	pwrFDR	FDR Power
2018-08-22	quint	Qualitative Interaction Trees
2018-08-22	Rcmdr	R Commander
2018-08-22	RJSDMX	R Interface to SDMX Web Services
2018-08-22	RSEIS	Seismic Time Series Analysis Tools
2018-08-22	rstantools	Tools for Developing R Packages Interfacing with 'Stan'
2018-08-22	rvinecopulib	High Performance Algorithms for Vine Copula Modeling
2018-08-22	SPUTNIK	SPatially aUTomatic deNoising for Ims toolKit
2018-08-22	SSBtools	Statistics Norway's Miscellaneous Tools
2018-08-22	TE	Insertion/Deletion Dynamics for Transposable Elements
2018-08-22	tidyhydat	Extract and Tidy Canadian 'Hydrometric' Data
2018-08-22	tinytex	Helper Functions to Install and Maintain 'TeX Live', and Compile 'LaTeX' Documents
2018-08-22	TLMoments	Calculate TL-Moments and Convert Them to Distribution Parameters
2018-08-22	TraMineRextras	TraMineR Extension
2018-08-22	wrapr	Wrap R Tools for Debugging and Parametric Programming
2018-08-21	DatabaseConnector	Connecting to Various Database Platforms
2018-08-21	decido	Bindings for 'Mapbox' Ear Cutting Triangulation Library
2018-08-21	iC10	A Copy Number and Expression-Based Classifier for Breast Tumours
2018-08-21	NCA	Necessary Condition Analysis
2018-08-21	planor	Generation of Regular Factorial Designs
2018-08-21	pls	Partial Least Squares and Principal Component Regression
2018-08-21	PMmisc	P&M Miscellaneous R Functions
2018-08-21	quickblock	Quick Threshold Blocking
2018-08-21	rdpower	Power Calculations for RD Designs
2018-08-21	rlas	Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data
2018-08-21	rsolr	R to Solr Interface
2018-08-21	SIDES	Subgroup Identification Based on Differential Effect Search
2018-08-21	synchronicity	Boost Mutex Functionality in R
2018-08-21	ubci	Get Cryptocurrency Related Data by Upbit
2018-08-20	AdaptiveSparsity	Adaptive Sparsity Models
2018-08-20	agriTutorial	Tutorial Analysis of Some Agricultural Experiments
2018-08-20	arkdb	Archive and Unarchive Databases Using Flat Files
2018-08-20	cartools	Tools for Understanding Highway Performance
2018-08-20	ChannelAttribution	Markov Model for the Online Multi-Channel Attribution Problem
2018-08-20	con2aqi	Calculate the AQI from Pollutant Concentration
2018-08-20	convevol	Analysis of Convergent Evolution
2018-08-20	dataPreparation	Automated Data Preparation
2018-08-20	dexter	Data Management and Analysis of Tests
2018-08-20	egor	Import and Analyse Ego-Centered Network Data
2018-08-20	GCD	Global Charcoal Database
2018-08-20	getProxy	Get Free Proxy IP and Port
2018-08-20	GWmodel	Geographically-Weighted Models
2018-08-20	hutils	Miscellaneous R Functions and Aliases
2018-08-20	ISAT	Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output
2018-08-20	KeyboardSimulator	Simulate Keyboard Press and Mouse Click
2018-08-20	lagged	Classes and Methods for Lagged Objects
2018-08-20	ltmle	Longitudinal Targeted Maximum Likelihood Estimation
2018-08-20	MRHawkes	Multivariate Renewal Hawkes Process
2018-08-20	mudata2	Interchange Tools for Multi-Parameter Spatiotemporal Data
2018-08-20	nCal	Nonlinear Calibration
2018-08-20	NRejections	Metrics for Multiple Testing with Correlated Outcomes
2018-08-20	panelView	Visualizing Panel Data with Dichotomous Treatments
2018-08-20	pGPx	Pseudo-Realizations for Gaussian Process Excursions
2018-08-20	phaseR	Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems
2018-08-20	plotmo	Plot a Model's Residuals, Response, and Partial Dependence Plots
2018-08-20	qsort	Scoring Q-Sort Data
2018-08-20	rfoaas	R Interface to 'FOAAS'
2018-08-20	RLT	Reinforcement Learning Trees
2018-08-20	shinyFeedback	Displays User Feedback Next to Shiny Inputs
2018-08-20	shp2graph	Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object
2018-08-20	sjstats	Collection of Convenient Functions for Common Statistical Computations
2018-08-20	SSDforR	Functions to Analyze Single System Data
2018-08-20	TraMineR	Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2018-08-20	tsibble	Tidy Temporal Data Frames and Tools
2018-08-19	bridgesampling	Bridge Sampling for Marginal Likelihoods and Bayes Factors
2018-08-19	censusapi	Retrieve Data from the Census APIs
2018-08-19	cgraph	Computational Graphs
2018-08-19	cocktailApp	'shiny' App to Discover Cocktails
2018-08-19	crqa	Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
2018-08-19	cvar	Compute Expected Shortfall and Value at Risk for Continuous Distributions
2018-08-19	datadr	Divide and Recombine for Large, Complex Data
2018-08-19	dwapi	A Client for 'data.world' REST API
2018-08-19	effects	Effect Displays for Linear, Generalized Linear, and Other Models
2018-08-19	ELYP	Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
2018-08-19	exifr	EXIF Image Data in R
2018-08-19	geogrid	Turn Geospatial Polygons into Regular or Hexagonal Grids
2018-08-19	GetLattesData	Reading Bibliometric Data from Lattes Platform
2018-08-19	HEMDAG	Hierarchical Ensemble Methods for Directed Acyclic Graphs
2018-08-19	hrbrthemes	Additional Themes, Theme Components and Utilities for 'ggplot2'
2018-08-19	IPEC	Root Mean Square Curvature Calculation
2018-08-19	latticeDensity	Density Estimation and Nonparametric Regression on Irregular Regions
2018-08-19	lazyrmd	Render R Markdown Outputs Lazily
2018-08-19	microplot	Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
2018-08-19	mockery	Mocking Library for R
2018-08-19	netjack	Tools for Working with Samples of Networks
2018-08-19	pinbasic	Fast and Stable Estimation of the Probability of Informed Trading (PIN)
2018-08-19	rangemodelR	Mid-Domain Effect and Species Richness
2018-08-19	RcmdrMisc	R Commander Miscellaneous Functions
2018-08-19	rcss	Convex Switching Systems
2018-08-19	SteinerNet	Steiner Tree Approach for Graph Analysis
2018-08-19	sugrrants	Supporting Graphs for Analysing Time Series
2018-08-19	sweep	Tidy Tools for Forecasting
2018-08-19	timetk	A Tool Kit for Working with Time Series in R
2018-08-19	UCSCXenaTools	Download and Explore Datasets from UCSC Xena Data Hubs
2018-08-19	vein	Vehicular Emissions Inventories
2018-08-19	XML	Tools for Parsing and Generating XML Within R and S-Plus
2018-08-18	BART	Bayesian Additive Regression Trees
2018-08-18	droptest	Simulates LOX Drop Testing
2018-08-18	emplik2	Empirical Likelihood Ratio Test for Two Samples with Censored Data
2018-08-18	geodetector	Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation
2018-08-18	icd	Comorbidity Calculations and Tools for ICD-9 and ICD-10 Codes
2018-08-18	krm	Kernel Based Regression Models
2018-08-18	mar1s	Multiplicative AR(1) with Seasonal Processes
2018-08-18	modopt.matlab	'MatLab'-Style Modeling of Optimization Problems
2018-08-18	narray	Subset- And Name-Aware Array Utility Functions
2018-08-18	Nmisc	Miscellaneous Functions Used at 'Numeract LLC'
2018-08-18	rqdatatable	'rquery' for 'data.table'
2018-08-18	shapes	Statistical Shape Analysis
2018-08-18	tergm	Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2018-08-18	truncreg	Truncated Gaussian Regression Models
2018-08-18	udapi	Urban Dictionary API Client
2018-08-18	VGAM	Vector Generalized Linear and Additive Models
2018-08-17	AbSim	Time Resolved Simulations of Antibody Repertoires
2018-08-17	airr	AIRR Data Representation Reference Library
2018-08-17	BAT	Biodiversity Assessment Tools
2018-08-17	bigstatsr	Statistical Tools for Filebacked Big Matrices
2018-08-17	BLPestimatoR	Performs a BLP Demand Estimation
2018-08-17	cdata	Fluid Data Transformations
2018-08-17	covTestR	Covariance Matrix Tests
2018-08-17	DLMtool	Data-Limited Methods Toolkit
2018-08-17	DMMF	Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
2018-08-17	emplik	Empirical Likelihood Ratio for Censored/Truncated Data
2018-08-17	ergm.ego	Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data
2018-08-17	GPrank	Gaussian Process Ranking of Multiple Time Series
2018-08-17	GSODR	Global Surface Summary of the Day (GSOD) Weather Data from R
2018-08-17	haploR	Query 'HaploReg', 'RegulomeDB', 'LDlink'
2018-08-17	hhi	Calculate and Visualize the Herfindahl-Hirschman Index
2018-08-17	iml	Interpretable Machine Learning
2018-08-17	imptree	Classification Trees with Imprecise Probabilities
2018-08-17	IRISMustangMetrics	Statistics and Metrics for Seismic Data
2018-08-17	jsonstat	Interface to 'JSON-stat'
2018-08-17	JuliaCall	Seamless Integration Between R and 'Julia'
2018-08-17	kohonen	Supervised and Unsupervised Self-Organising Maps
2018-08-17	LatticeDesign	Lattice-Based Space-Filling Designs
2018-08-17	lme4	Linear Mixed-Effects Models using 'Eigen' and S4
2018-08-17	lpirfs	Local Projections Impulse Response Functions
2018-08-17	matrixProfile	Matrix Profile
2018-08-17	metacom	Analysis of the 'Elements of Metacommunity Structure'
2018-08-17	MSEtool	Management Strategy Evaluation Toolkit
2018-08-17	mstrio	Interface for 'MicroStrategy' REST APIs
2018-08-17	muHVT	Constructing Hierarchical Voronoi Tessellations and Overlay Heatmap for Data Analysis
2018-08-17	ncodeR	Techniques for Automated Classifiers
2018-08-17	optimStrat	Choosing the Sample Strategy
2018-08-17	optrdd	Optimized Regression Discontinuity Designs
2018-08-17	pathfindR	Pathway Enrichment Analysis Utilizing Active Subnetworks
2018-08-17	permubiome	A Permutation Based Test for Biomarker Discovery in Microbiome Data
2018-08-17	prc	Paired Response Curve
2018-08-17	pubmed.mineR	Text Mining of PubMed Abstracts
2018-08-17	randomForestSRC	Random Forests for Survival, Regression, and Classification (RF-SRC)
2018-08-17	rattle	Graphical User Interface for Data Science in R
2018-08-17	rcrtan	Criterion-Referenced Test Analysis
2018-08-17	rhli	An R Implementation of the FIS MarketMap C-Toolkit
2018-08-17	rpostgis	R Interface to a 'PostGIS' Database
2018-08-17	sandwich	Robust Covariance Matrix Estimators
2018-08-17	SimRVPedigree	Simulate Pedigrees Ascertained for a Rare Disease
2018-08-17	SqlRender	Rendering Parameterized SQL and Translation to Dialects
2018-08-17	textutils	Utilities for Handling Strings and Text
2018-08-17	tsmp	Time Series with Matrix Profile
2018-08-17	VarBundle	Read-Only Variable Bundles
2018-08-16	AST	Age-Spatial-Temporal Model
2018-08-16	batchtools	Tools for Computation on Batch Systems
2018-08-16	bivariate	Bivariate Probability Distributions
2018-08-16	canvasXpress	Visualization Package for CanvasXpress in R
2018-08-16	castor	Efficient Phylogenetics on Large Trees
2018-08-16	CDM	Cognitive Diagnosis Modeling
2018-08-16	cmvnorm	The Complex Multivariate Gaussian Distribution
2018-08-16	datastructures	Implementation of Core Data Structures
2018-08-16	dyncomp	Complexity of Short and Coarse-Grained Time Series
2018-08-16	EGRET	Exploration and Graphics for RivEr Trends (EGRET)
2018-08-16	EGRETci	Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals
2018-08-16	EM.Fuzzy	EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information
2018-08-16	ergm	Fit, Simulate and Diagnose Exponential-Family Models for Networks
2018-08-16	GenomicTools.fileHandler	File Handlers for Genomic Data Analysis
2018-08-16	jtools	Analysis and Presentation of Social Scientific Data
2018-08-16	LDheatmap	Graphical Display of Pairwise Linkage Disequilibria Between SNPs
2018-08-16	leanpubr	'Leanpub' API Interface
2018-08-16	lest	Vectorised Nested if-else Statements Similar to CASE WHEN in 'SQL'
2018-08-16	mapdeck	Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl'
2018-08-16	mapedit	Interactive Editing of Spatial Data in R
2018-08-16	mapview	Interactive Viewing of Spatial Data in R
2018-08-16	merlin	Mixed Effects Regression for Linear, Non-Linear and User-Defined Models
2018-08-16	mixchar	Mixture Model for the Deconvolution of Thermal Decay Curves
2018-08-16	mlt.docreg	Most Likely Transformations: Documentation and Regression Tests
2018-08-16	mscstts	R Client for the Microsoft Cognitive Services 'Text-to-Speech' REST API
2018-08-16	MVNBayesian	Bayesian Analysis Framework for MVN (Mixture) Distribution
2018-08-16	NetworkInference	Inferring Latent Diffusion Networks
2018-08-16	openEBGM	EBGM Scores for Mining Large Contingency Tables
2018-08-16	phonics	Phonetic Spelling Algorithms
2018-08-16	pkgconfig	Private Configuration for 'R' Packages
2018-08-16	processx	Execute and Control System Processes
2018-08-16	RcppArmadillo	'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2018-08-16	rlang	Functions for Base Types and Core R and 'Tidyverse' Features
2018-08-16	roprov	Low-Level Support for Provenance Capture Between in-Memory R Objects
2018-08-16	RWDataPlyr	Read and Manipulate Data from 'RiverWare'
2018-08-16	SHELF	Tools to Support the Sheffield Elicitation Framework
2018-08-16	sindyr	Sparse Identification of Nonlinear Dynamics
2018-08-16	STPGA	Selection of Training Populations by Genetic Algorithm
2018-08-16	stpm	Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes
2018-08-16	synthpop	Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2018-08-16	tm.plugin.mail	Text Mining E-Mail Plug-in
2018-08-16	trackr	Semantic Annotation and Discoverability System for R-Based Artifacts
2018-08-16	trawl	Estimation and Simulation of Trawl Processes
2018-08-15	BayesGOF	Bayesian Modeling via Goodness-of-Fit
2018-08-15	bioacoustics	Analyse Audio Recordings and Automatically Extract Animal Vocalizations
2018-08-15	BMisc	Miscellaneous Functions for Panel Data, Quantiles, and Printing Results
2018-08-15	bomrang	Australian Government Bureau of Meteorology (BOM) Data from R
2018-08-15	cholera	Amend, Augment and Aid Analysis of John Snow's Cholera Map
2018-08-15	choroplethr	Simplify the Creation of Choropleth Maps in R
2018-08-15	civis	R Client for the 'Civis data science API'
2018-08-15	distances	Tools for Distance Metrics
2018-08-15	echo.find	Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO)
2018-08-15	ENMeval	Automated Runs and Evaluations of Ecological Niche Models
2018-08-15	filesstrings	Handy File and String Manipulation
2018-08-15	helminthR	Access London Natural History Museum Host-Helminth Record Database
2018-08-15	mumm	Multiplicative Mixed Models using the Template Model Builder
2018-08-15	NormalBetaPrime	Normal Beta Prime Prior
2018-08-15	phreeqc	R Interface to Geochemical Modeling Software
2018-08-15	PMCMRplus	Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended
2018-08-15	psidR	Build Panel Data Sets from PSID Raw Data
2018-08-15	rpdo	Pacific Decadal Oscillation Index Data
2018-08-15	rquery	Relational Query Generator for Data Manipulation at Scale
2018-08-15	RSuite	Supports Developing, Building and Deploying R Solution
2018-08-15	spdep	Spatial Dependence: Weighting Schemes, Statistics and Models
2018-08-15	stilt	Separable Gaussian Process Interpolation (Emulation)
2018-08-15	sybil	Efficient Constrained Based Modelling
2018-08-15	tensr	Covariance Inference and Decompositions for Tensor Datasets
2018-08-15	texPreview	Compile and Preview Snippets of 'LaTeX' in 'RStudio'
2018-08-15	vetr	Trust, but Verify
2018-08-14	AMR	Antimicrobial Resistance Analysis
2018-08-14	aphid	Analysis with Profile Hidden Markov Models
2018-08-14	BalancedSampling	Balanced and Spatially Balanced Sampling
2018-08-14	BayesCTDesign	Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data
2018-08-14	BootValidation	Adjusting for Optimism in 'glmnet' Regression using Bootstrapping
2018-08-14	cobalt	Covariate Balance Tables and Plots
2018-08-14	DemoDecomp	Decompose Demographic Functions
2018-08-14	DescTools	Tools for Descriptive Statistics
2018-08-14	epiflows	Predicting Disease Spread from Flow Data
2018-08-14	fc	Standard Evaluation-Based Multivariate Function Composition
2018-08-14	geonapi	'GeoNetwork' API R Interface
2018-08-14	ggstatsplot	'ggplot2' Based Plots with Statistical Details
2018-08-14	GmAMisc	Gianmarco Alberti Miscellaneous
2018-08-14	ipred	Improved Predictors
2018-08-14	JointAI	Joint Analysis and Imputation of Incomplete Data
2018-08-14	KScorrect	Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests
2018-08-14	landscapemetrics	Landscape Metrics for Categorical Map Patterns
2018-08-14	LMfilteR	Filter Methods for Parameter Estimation in Linear Regression Models
2018-08-14	MALDIquantForeign	Import/Export Routines for 'MALDIquant'
2018-08-14	MANOVA.RM	Analysis of Multivariate Data and Repeated Measures Designs
2018-08-14	MRPC	Mendelian Randomization (MR) Based PC Algorithm
2018-08-14	ohtadstats	Tomoka Ohta D Statistics
2018-08-14	pmmlTransformations	Transforms Input Data from a PMML Perspective
2018-08-14	powerlmm	Power Analysis for Longitudinal Multilevel Models
2018-08-14	ProFit	Fit Projected 2D Profiles to Galaxy Images
2018-08-14	ProliferativeIndex	Calculates and Analyzes the Proliferative Index
2018-08-14	Quandl	API Wrapper for Quandl.com
2018-08-14	rcompanion	Functions to Support Extension Education Program Evaluation
2018-08-14	rfacebookstat	Load Data from Facebook API Marketing
2018-08-14	Rnmr1D	Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
2018-08-14	rplos	Interface to the Search API for 'PLoS' Journals
2018-08-14	rpsftm	Rank Preserving Structural Failure Time Models
2018-08-14	SDALGCP	Spatially Discrete Approximation to Log-Gaussian Cox Processes for Aggregated Disease Count Data
2018-08-14	snakecase	Convert Strings into any Case
2018-08-14	touchard	Touchard Model and Regression
2018-08-14	usethis	Automate Package and Project Setup
2018-08-14	vapour	Lightweight Access to the 'Geospatial Data Abstraction Library' ('GDAL')
2018-08-14	WeMix	Weighted Mixed-Effects Models, using Multilevel Pseudo Maximum Likelihood Estimation
2018-08-14	XGR	Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis
2018-08-14	ZipRadius	Creates a Data Frame of US Zip Codes in a Given Radius from a Given US Zip Code
2018-08-13	ammistability	Additive Main Effects and Multiplicative Interaction Model Stability Parameters
2018-08-13	bcp	Bayesian Analysis of Change Point Problems
2018-08-13	bigreadr	Read Large Text Files
2018-08-13	BLOQ	Impute and Analyze Data with Observations Below the Limit of Quantification
2018-08-13	boostmtree	Boosted Multivariate Trees for Longitudinal Data
2018-08-13	brandwatchR	'Brandwatch' API to R
2018-08-13	Brobdingnag	Very Large Numbers in R
2018-08-13	CSFA	Connectivity Scores with Factor Analysis
2018-08-13	dials	Tools for Creating Tuning Parameter Values
2018-08-13	dint	A Toolkit for Year-Quarter and Year-Month Dates
2018-08-13	DSAIRM	Dynamical Systems Approach to Immune Response Modeling
2018-08-13	econet	Estimation of Parameter-Dependent Network Centrality Measures
2018-08-13	EL2Surv	Empirical Likelihood (EL) for Comparing Two Survival Functions
2018-08-13	fansi	ANSI Control Sequence Aware String Functions
2018-08-13	frailtyHL	Frailty Models via Hierarchical Likelihood
2018-08-13	funHDDC	Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces
2018-08-13	garray	Generalized Array Arithmetic for Ragged Arrays with Named Margins
2018-08-13	GENEAclassify	Segmentation and Classification of Accelerometer Data
2018-08-13	grplasso	Fitting User-Specified Models with Group Lasso Penalty
2018-08-13	IsoplotR	Statistical Toolbox for Radiometric Geochronology
2018-08-13	junctions	The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
2018-08-13	kirby21.base	Example Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	kirby21.fmri	Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	kirby21.t1	Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	ltable	Easy to Make (Lazy) Tables
2018-08-13	matlabr	An Interface for MATLAB using System Calls
2018-08-13	mccf1	Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and the Best Threshold
2018-08-13	mets	Analysis of Multivariate Event Times
2018-08-13	MFPCA	Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains
2018-08-13	nestfs	Cross-Validated (Nested) Forward Selection
2018-08-13	netgwas	Network-Based Genome Wide Association Studies
2018-08-13	onewaytests	One-Way Tests in Independent Groups Designs
2018-08-13	painter	Creation and Manipulation of Color Palettes
2018-08-13	patrick	Parameterized Unit Testing
2018-08-13	quadmatrix	Solving Quadratic Matrix Equations
2018-08-13	respirometry	Tools for Conducting and Analyzing Respirometry Experiments
2018-08-13	RNeXML	Semantically Rich I/O for the 'NeXML' Format
2018-08-13	rpart.plot	Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
2018-08-13	RQGIS	Integrating R with QGIS
2018-08-13	Rspotify	Access to Spotify API
2018-08-13	sars	Fit and Compare Species-Area Relationship Models Using Multimodel Inference
2018-08-13	SCPME	Shrinking Characteristics of Precision Matrix Estimators
2018-08-13	sequoia	Pedigree Inference from SNPs
2018-08-13	SimInf	A Framework for Data-Driven Stochastic Disease Spread Simulations
2018-08-13	SpaDES.core	Core Utilities for Developing and Running Spatially Explicit Discrete Event Simulation Models
2018-08-13	subprocess	Manage Sub-Processes in R
2018-08-13	togglr	'Toggl.com' Api for 'Rstudio'
2018-08-12	gbutils	Simulation of Real and Complex Numbers and Small Programming Utilities
2018-08-12	jmv	The 'jamovi' Analyses
2018-08-12	jmvcore	Dependencies for the 'jamovi' Framework
2018-08-12	maditr	Pipe-Style Interface for 'data.table'
2018-08-12	mirt	Multidimensional Item Response Theory
2018-08-12	PSCBS	Analysis of Parent-Specific DNA Copy Numbers
2018-08-12	RagGrid	A Wrapper of the 'JavaScript' Library 'agGrid'
2018-08-11	ceterisParibus	Ceteris Paribus Profiles
2018-08-11	chorrrds	Music Chords Extraction
2018-08-11	clusrank	Wilcoxon Rank Sum Test for Clustered Data
2018-08-11	EcoNetGen	Simulate and Sample from Ecological Interaction Networks
2018-08-11	energy	E-Statistics: Multivariate Inference via the Energy of Data
2018-08-11	fasterElasticNet	An Amazing Fast Way to Fit Elastic Net
2018-08-11	ggeffects	Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
2018-08-11	glm2	Fitting Generalized Linear Models
2018-08-11	jmvconnect	Connect to the 'jamovi' Statistical Spreadsheet
2018-08-11	lessR	Less Code, More Results
2018-08-11	mosaic	Project MOSAIC Statistics and Mathematics Teaching Utilities
2018-08-11	nsapi	Connect to the NS (Dutch Railways) API
2018-08-11	psychReport	Reproducible Reports in Psychology
2018-08-11	rcites	R Interface to the Species+ Database
2018-08-11	roll	Rolling Statistics
2018-08-11	sdStaf	Species Distribution and Stability Future Models
2018-08-11	sjlabelled	Labelled Data Utility Functions
2018-08-11	SuperLearner	Super Learner Prediction
2018-08-11	testthis	Utils and 'RStudio' Addins to Make Testing Even More Fun
2018-08-10	abn	Modelling Multivariate Data with Additive Bayesian Networks
2018-08-10	atlas	Stanford 'ATLAS' Search Engine API
2018-08-10	BGGE	Bayesian Genomic Linear Models Applied to GE Genome Selection
2018-08-10	BrailleR	Improved Access for Blind Users
2018-08-10	dnet	Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2018-08-10	esDesign	Adaptive Enrichment Designs with Sample Size Re-Estimation
2018-08-10	FNN	Fast Nearest Neighbor Search Algorithms and Applications
2018-08-10	genBaRcode	Analysis and Visualization Tools for Genetic Barcode Data
2018-08-10	imp4p	Imputation for Proteomics
2018-08-10	kernlab	Kernel-Based Machine Learning Lab
2018-08-10	lava	Latent Variable Models
2018-08-10	libstableR	Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions
2018-08-10	MAINT.Data	Model and Analyse Interval Data
2018-08-10	MCMCprecision	Precision of Discrete Parameters in Transdimensional MCMC
2018-08-10	mirtCAT	Computerized Adaptive Testing with Multidimensional Item Response Theory
2018-08-10	ModelMetrics	Rapid Calculation of Model Metrics
2018-08-10	nonlinearTseries	Nonlinear Time Series Analysis
2018-08-10	photobiologyInOut	Read Spectral and Logged Data from Foreign Files
2018-08-10	ps	List, Query, Manipulate System Processes
2018-08-10	pubh	A Toolbox for Public Health and Epidemiology
2018-08-10	RANN.L1	Fast Nearest Neighbour Search (Wraps ANN Library) Using L1 Metric
2018-08-10	RcmdrPlugin.SCDA	Rcmdr Plugin for Designing and Analyzing Single-Case Experiments
2018-08-10	RcppCWB	'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
2018-08-10	RQuantLib	R Interface to the 'QuantLib' Library
2018-08-10	RSNNS	Neural Networks using the Stuttgart Neural Network Simulator (SNNS)
2018-08-10	smoothSurv	Survival Regression with Smoothed Error Distribution
2018-08-10	SnakeCharmR	R and Python Integration
2018-08-10	spGARCH	Spatial ARCH and GARCH Models (spGARCH)
2018-08-10	telefit	Estimation and Prediction for Remote Effects Spatial Process Models
2018-08-10	tesseract	Open Source OCR Engine
2018-08-09	Conigrave	Flexible Tools for Multiple Imputation
2018-08-09	dMod	Dynamic Modeling and Parameter Estimation in ODE Models
2018-08-09	FedData	Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2018-08-09	funData	An S4 Class for Functional Data
2018-08-09	GNE	Computation of Generalized Nash Equilibria
2018-08-09	hddtools	Hydrological Data Discovery Tools
2018-08-09	HMDHFDplus	Read Human Mortality Database and Human Fertility Database Data from the Web
2018-08-09	jcolors	Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2'
2018-08-09	logKDE	Computing Log-Transformed Kernel Density Estimates for Positive Data
2018-08-09	lslx	Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood
2018-08-09	MDSMap	High Density Genetic Linkage Mapping using Multidimensional Scaling
2018-08-09	metaplot	Data-Driven Diagnostic Plots
2018-08-09	mongolite	Fast and Simple 'MongoDB' Client for R
2018-08-09	PairViz	Visualization using Graph Traversal
2018-08-09	reclin	Record Linkage Toolkit
2018-08-09	scales	Scale Functions for Visualization
2018-08-09	socialmixr	Social Mixing Matrices for Infectious Disease Modelling
2018-08-09	spmoran	Moran's Eigenvector-Based Spatial Regression Models
2018-08-09	stUPscales	Spatio-Temporal Uncertainty Propagation Across Multiple Scales
2018-08-09	tm1r	The Integration Between 'IBM COGNOS TM1' and R
2018-08-09	tmap	Thematic Maps
2018-08-09	trialr	Clinical Trial Designs in 'RStan'
2018-08-09	uGMAR	Estimate Univariate Gaussian or Student's t Mixture Autoregressive Model
2018-08-09	VariableScreening	High-Dimensional Screening for Semiparametric Longitudinal Regression
2018-08-09	vimp	Nonparametric Variable Importance
2018-08-09	vinereg	D-Vine Quantile Regression
2018-08-08	airGRteaching	Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included)
2018-08-08	bWGR	Bayesian Whole-Genome Regression
2018-08-08	CarletonStats	Functions for Statistics Classes at Carleton College
2018-08-08	cOde	Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'
2018-08-08	collections	High Performance Container Data Types
2018-08-08	datafsm	Estimating Finite State Machine Models from Data
2018-08-08	dlsem	Distributed-Lag Linear Structural Equation Models
2018-08-08	hpiR	House Price Indexes
2018-08-08	IDmining	Intrinsic Dimension for Data Mining
2018-08-08	iterpc	Efficient Iterator for Permutations and Combinations
2018-08-08	mdmb	Model Based Treatment of Missing Data
2018-08-08	party	A Laboratory for Recursive Partytioning
2018-08-08	populationPDXdesign	Designing Population PDX Studies
2018-08-08	PRISMAstatement	Plot Flow Charts According to the "PRISMA" Statement
2018-08-08	skpr	Design of Experiments Suite: Generate and Evaluate Optimal Designs
2018-08-08	svars	Data-Driven Identification of SVAR Models
2018-08-08	taxa	Taxonomic Classes
2018-08-08	WCE	Weighted Cumulative Exposure Models
2018-08-07	archivist.github	Tools for Archiving, Managing and Sharing R Objects via GitHub
2018-08-07	billboarder	Create Interactive Chart with the JavaScript 'Billboard' Library
2018-08-07	chngpt	Estimation and Hypothesis Testing for Threshold Regression
2018-08-07	ctmm	Continuous-Time Movement Modeling
2018-08-07	drake	A Pipeline Toolkit for Reproducible Computation at Scale
2018-08-07	english	Translate Integers into English
2018-08-07	FateID	Quantification of Fate Bias in Multipotent Progenitors
2018-08-07	ForecastComb	Forecast Combination Methods
2018-08-07	gRbase	A Package for Graphical Modelling in R
2018-08-07	gridsample	Tools for Grid-Based Survey Sampling Design
2018-08-07	gumbel	The Gumbel-Hougaard Copula
2018-08-07	HiResTEC	Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
2018-08-07	IDE	Integro-Difference Equation Spatio-Temporal Models
2018-08-07	jackstraw	Statistical Inference for Unsupervised Learning
2018-08-07	kmed	Distance-Based k-Medoids
2018-08-07	kyotil	Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies
2018-08-07	metaboGSE	Gene Set Enrichment Analysis via Integration of Metabolic Networks and RNA-Seq Data
2018-08-07	Mqrcm	M-Quantile Regression Coefficients Modeling
2018-08-07	MSMwRA	Multivariate Statistical Methods with R Applications
2018-08-07	nilde	Nonnegative Integer Solutions of Linear Diophantine Equations with Applications
2018-08-07	nsROC	Non-Standard ROC Curve Analysis
2018-08-07	pbdMPI	Programming with Big Data – Interface to MPI
2018-08-07	RaceID	Identification of Cell Types and Inference of Lineage Trees from Single-Cell RNA-Seq Data
2018-08-07	RCzechia	Spatial Objects of the Czech Republic
2018-08-07	reproducible	A Set of Tools that Enhance Reproducibility Beyond Package Management
2018-08-07	rhosp	Side Effect Risks in Hospital : Simulation and Estimation
2018-08-07	rmcfs	The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery
2018-08-07	roadoi	Find Free Versions of Scholarly Publications via Unpaywall
2018-08-07	rplotengine	R as a Plotting Engine
2018-08-07	scBio	Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data
2018-08-07	tensorflow	R Interface to 'TensorFlow'
2018-08-07	tmaptools	Thematic Map Tools
2018-08-07	tsallisqexp	Tsallis q-Exp Distribution
2018-08-06	BEDMatrix	Extract Genotypes from a PLINK .bed File
2018-08-06	circumplex	Analysis and Visualization of Circular Data
2018-08-06	cmsaf	Tools for CM SAF NetCDF Data
2018-08-06	coda.base	A Basic Set of Functions for Compositional Data Analysis
2018-08-06	crochet	Implementation Helper for [ and [<- Of Custom Matrix-Like Types
2018-08-06	daarem	Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms
2018-08-06	DALEX	Descriptive mAchine Learning EXplanations
2018-08-06	DSAIDE	Dynamical Systems Approach to Infectious Disease Epidemiology
2018-08-06	exiftoolr	ExifTool Functionality from R
2018-08-06	float	32-Bit Floats
2018-08-06	freegroup	The Free Group
2018-08-06	gasfluxes	Greenhouse Gas Flux Calculation from Chamber Measurements
2018-08-06	greybox	Toolbox for Model Building and Forecasting
2018-08-06	IMak	Item Maker
2018-08-06	infer	Tidy Statistical Inference
2018-08-06	knor	Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means
2018-08-06	LadR	Routines for Fit, Inference and Diagnostics in LAD Models
2018-08-06	LinkedMatrix	Column-Linked and Row-Linked Matrices
2018-08-06	MatrixLDA	Penalized Matrix-Normal Linear Discriminant Analysis
2018-08-06	mfGARCH	Mixed-Frequency GARCH Models
2018-08-06	NHMSAR	Non-Homogeneous Markov Switching Autoregressive Models
2018-08-06	nseval	A Clean API for Lazy and Non-Standard Evaluation
2018-08-06	ordinalClust	Ordinal Data Clustering, Co-Clustering and Classification
2018-08-06	PhySortR	A Fast, Flexible Tool for Sorting Phylogenetic Trees
2018-08-06	PQLseq	Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies
2018-08-06	rcrossref	Client for Various 'CrossRef' 'APIs'
2018-08-06	TDA	Statistical Tools for Topological Data Analysis
2018-08-06	timeseriesdb	Manage Time Series for Official Statistics with R and PostgreSQL
2018-08-06	varImp	RF Variable Importance for Arbitrary Measures
2018-08-06	vars	VAR Modelling
2018-08-05	behaviorchange	Tools for Behavior Change Researchers and Professionals
2018-08-05	BMSC	Bayesian Model Selection under Constraints
2018-08-05	fitur	Fit Univariate Distributions
2018-08-05	ICAOD	Optimal Designs for Nonlinear Models
2018-08-05	localIV	Estimation of Marginal Treatment Effects using Local Instrumental Variables
2018-08-05	MKmisc	Miscellaneous Functions from M. Kohl
2018-08-05	MultiFit	Multivariate Multiscale Framework for Independence Tests
2018-08-05	nbc4va	Bayes Classifier for Verbal Autopsy Data
2018-08-05	PELVIS	Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae
2018-08-05	reticulate	Interface to 'Python'
2018-08-05	RobRex	Optimally Robust Influence Curves for Regression and Scale
2018-08-05	simmer.bricks	Helper Methods for 'simmer' Trajectories
2018-08-05	survsup	Plotting Survival Curves with Numbers at Risk Table
2018-08-05	TDAstats	Pipeline for Topological Data Analysis
2018-08-05	tidyRSS	Tidy RSS for R
2018-08-05	tidytransit	Read, Validate, Analyze, and Map Files in the General Transit Feed Specification
2018-08-04	d3r	'd3.js' Utilities for R
2018-08-04	FDboost	Boosting Functional Regression Models
2018-08-04	FENmlm	Fixed Effects Nonlinear Maximum Likelihood Models
2018-08-04	gtrendsR	Perform and Display Google Trends Queries
2018-08-04	kendallRandomWalks	Simulate and Visualize Kendall Random Walks and Related Distributions
2018-08-04	mvMORPH	Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2018-08-04	Rdpack	Update and Manipulate Rd Documentation Objects
2018-08-04	resampledata	Data Sets for Mathematical Statistics with Resampling in R
2018-08-04	ROptRegTS	Optimally Robust Estimation for Regression-Type Models
2018-08-04	RPANDA	Phylogenetic ANalyses of DiversificAtion
2018-08-04	rPraat	Interface to Praat
2018-08-04	simmer.plot	Plotting Methods for 'simmer'
2018-08-04	sjmisc	Data and Variable Transformation Functions
2018-08-04	soundgen	Parametric Voice Synthesis
2018-08-04	survminer	Drawing Survival Curves using 'ggplot2'
2018-08-03	ctl	Correlated Trait Locus (CTL) Mapping in R
2018-08-03	dbx	A Fast, Easy-to-Use Database Interface
2018-08-03	demogR	Analysis of Age-Structured Demographic Models
2018-08-03	docopt	Command-Line Interface Specification Language
2018-08-03	easyCODA	Compositional Data Analysis in Practice
2018-08-03	elliptic	Weierstrass and Jacobi Elliptic Functions
2018-08-03	ggformula	Formula Interface to the Grammar of Graphics
2018-08-03	ggplotify	Convert Plot to 'grob' or 'ggplot' Object
2018-08-03	hwwntest	Tests of White Noise using Wavelets
2018-08-03	icesTAF	Functions to Support the ICES Transparent Assessment Framework
2018-08-03	jmdl	Joint Mean-Correlation Regression Approach for Discrete Longitudinal Data
2018-08-03	nomisr	Access 'Nomis' UK Labour Market Data
2018-08-03	NPMLEcmprsk	Type-Specific Failure Rate and Hazard Rate on Competing Risks Data
2018-08-03	OpenMx	Extended Structural Equation Modelling
2018-08-03	pre	Prediction Rule Ensembles
2018-08-03	provenance	Statistical Toolbox for Sedimentary Provenance Analysis
2018-08-03	rare	Linear Model with Tree-Based Lasso Regularization for Rare Features
2018-08-03	rgdal	Bindings for the 'Geospatial' Data Abstraction Library
2018-08-03	RobAStBase	Robust Asymptotic Statistics
2018-08-03	RobExtremes	Optimally Robust Estimation for Extreme Value Distributions
2018-08-03	RobLox	Optimally Robust Influence Curves and Estimators for Location and Scale
2018-08-03	RobLoxBioC	Infinitesimally Robust Estimators for Preprocessing -Omics Data
2018-08-03	ROptEst	Optimally Robust Estimation
2018-08-03	ROptEstOld	Optimally Robust Estimation - Old Version
2018-08-03	rsparkling	R Interface for H2O Sparkling Water
2018-08-03	Tides	Quasi-Periodic Time Series Characteristics
2018-08-03	TOSTER	Two One-Sided Tests (TOST) Equivalence Testing
2018-08-03	urltools	Vectorised Tools for URL Handling and Parsing
2018-08-02	ADMMsigma	Penalized Precision Matrix Estimation via ADMM
2018-08-02	bayesplot	Plotting for Bayesian Models
2018-08-02	BivGeo	Basu-Dhar Bivariate Geometric Distribution
2018-08-02	cromwellDashboard	A Dashboard to Visualize Scientific Workflows in 'Cromwell'
2018-08-02	cxhull	Convex Hull
2018-08-02	disto	Unified Interface to Distance, Dissimilarity, Similarity Matrices
2018-08-02	dlnm	Distributed Lag Non-Linear Models
2018-08-02	dslabs	Data Science Labs
2018-08-02	fieldRS	Remote Sensing Field Work Tools
2018-08-02	FSelectorRcpp	'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
2018-08-02	gestalt	Tools for Making and Combining Functions
2018-08-02	GFE	Gross Flows Estimation under Complex Surveys
2018-08-02	gjam	Generalized Joint Attribute Modeling
2018-08-02	GPCMlasso	Differential Item Functioning in Generalized Partial Credit Models
2018-08-02	HCT	Calculates Significance Criteria and Power for a Single Arm Trial
2018-08-02	heatwaveR	Detect Heatwaves and Cold-Spells
2018-08-02	hipread	Read Hierarchical Fixed Width Files
2018-08-02	LncFinder	LncRNA Identification and Analysis Using Heterologous Features
2018-08-02	omu	A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection
2018-08-02	pcgen	Reconstruction of Causal Networks for Data with Random Genetic Effects
2018-08-02	polyRAD	Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids
2018-08-02	princurve	Fits a Principal Curve in Arbitrary Dimension
2018-08-02	Rd2roxygen	Convert Rd to 'Roxygen' Documentation
2018-08-02	readmnist	Read MNIST Dataset
2018-08-02	reportROC	An Easy Way to Report ROC Analysis
2018-08-02	rmake	Makefile Generator for R Analytical Projects
2018-08-02	rmi	Mutual Information Estimators
2018-08-02	rolocISCCNBS	A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation
2018-08-02	seqminer	Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R
2018-08-02	sparkbq	Google 'BigQuery' Support for 'sparklyr'
2018-08-02	SparseMDC	Implementation of SparseMDC Algorithm
2018-08-02	strip	Lighten your R Model Outputs
2018-08-02	tidybayes	Tidy Data and 'Geoms' for Bayesian Models
2018-08-02	tribe	Play with the Tribe of Attributes
2018-08-02	ufs	Quantitative Analysis Made Accessible
2018-08-01	albopictus	Age-Structured Population Dynamics Model
2018-08-01	ARIbrain	All-Resolution Inference
2018-08-01	aws.kms	'AWS Key Management Service' Client Package
2018-08-01	CANSIM2R	Directly Extracts Complete CANSIM Data Tables
2018-08-01	causalweight	Estimation Methods for Causal Inference Based on Inverse Probability Weighting
2018-08-01	climdex.pcic	PCIC Implementation of Climdex Routines
2018-08-01	codebook	Automatic Codebooks from Survey Metadata Encoded in Attributes
2018-08-01	colourvision	Colour Vision Models
2018-08-01	ContaminatedMixt	Model-Based Clustering and Classification with the Multivariate Contaminated Normal Distribution
2018-08-01	csvy	Import and Export CSV Data with a YAML Metadata Header
2018-08-01	discSurv	Discrete Time Survival Analysis
2018-08-01	distrMod	Object Oriented Implementation of Probability Models
2018-08-01	double.truncation	Analysis of Doubly-Truncated Data
2018-08-01	epubr	Read EPUB File Metadata and Text
2018-08-01	ggsom	New Data Visualisations for SOMs Cluster
2018-08-01	hyper2	The Hyperdirichlet Distribution, Mark 2
2018-08-01	ICcalib	Cox Model with Interval-Censored Starting Time of a Covariate
2018-08-01	jomo	Multilevel Joint Modelling Multiple Imputation
2018-08-01	lfl	Linguistic Fuzzy Logic
2018-08-01	mbbefd	Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2018-08-01	mvctm	Multivariate Variance Components Tests for Multilevel Data
2018-08-01	netregR	Regression of Network Responses
2018-08-01	nodbi	'NoSQL' Database Connector
2018-08-01	RandVar	Implementation of Random Variables
2018-08-01	redcapAPI	Interface to 'REDCap'
2018-08-01	spatstat	Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2018-08-01	spData	Datasets for Spatial Analysis
2018-08-01	spef	Semiparametric Estimating Functions
2018-08-01	tcR	Advanced Data Analysis of Immune Receptor Repertoires
2018-08-01	validate	Data Validation Infrastructure
2018-07-31	adaptMT	Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information
2018-07-31	alpaca	Fit GLM's with High-Dimensional k-Way Fixed Effects
2018-07-31	anyflights	Download Air Travel Data for Specified Years and Airports
2018-07-31	bazar	Miscellaneous Basic Functions
2018-07-31	BDP2	Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint
2018-07-31	beezdemand	Behavioral Economic Easy Demand
2018-07-31	biglmm	Bounded Memory Linear and Generalized Linear Models
2018-07-31	bnviewer	Interactive Visualization of Bayesian Networks
2018-07-31	corrr	Correlations in R
2018-07-31	dhh	A Heavy-Headed Distribution
2018-07-31	EMSHS	EM Algorithm for Bayesian Shrinkage Approach with Structural Information Incorporated
2018-07-31	flifo	Don't Get Stuck with Stacks in R
2018-07-31	funModeling	Exploratory Data Analysis and Data Preparation Tool-Box Book
2018-07-31	gcKrig	Analysis of Geostatistical Count Data using Gaussian Copulas
2018-07-31	geomerge	Geospatial Data Integration
2018-07-31	huxtable	Easily Create and Style Tables for LaTeX, HTML and Other Formats
2018-07-31	janitor	Simple Tools for Examining and Cleaning Dirty Data
2018-07-31	jarbes	Just a Rather Bayesian Evidence Synthesis
2018-07-31	Kernelheaping	Kernel Density Estimation for Heaped and Rounded Data
2018-07-31	LVGP	Latent Variable Gaussian Process Modeling with Qualitative and Quantitative Input Variables
2018-07-31	makeParallel	Transform Serial R Code into Parallel R Code
2018-07-31	maptools	Tools for Reading and Handling Spatial Objects
2018-07-31	MEPDF	Creation of Empirical Density Functions Based on Multivariate Data
2018-07-31	phylotaR	Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
2018-07-31	ProFound	Photometry Tools
2018-07-31	RobAStRDA	Interpolation Grids for Packages of the 'RobASt' - Family of Packages
2018-07-31	robmixglm	Robust Generalized Linear Models (GLM) using Mixtures
2018-07-31	RQEntangle	Quantum Entanglement of Bipartite System
2018-07-31	SingleCaseES	A Calculator for Single-Case Effect Sizes
2018-07-31	statip	Statistical Functions for Probability Distributions and Regression
2018-07-31	uniformly	Uniform Sampling
2018-07-31	venn	Draw Venn Diagrams
2018-07-31	VFP	Variance Function Program
2018-07-31	whitechapelR	Advanced Policing Techniques for the Board Game "Letters from Whitechapel"
2018-07-30	aws	Adaptive Weights Smoothing
2018-07-30	breathteststan	Stan-Based Fit to Gastric Emptying Curves
2018-07-30	cregg	Simple Conjoint Tidying, Analysis, and Visualization
2018-07-30	CrossClustering	A Partial Clustering Algorithm
2018-07-30	cytofan	Plot Fan Plots for Cytometry Data using 'ggplot2'
2018-07-30	dcmodify	Modify Data Using Externally Defined Modification Rules
2018-07-30	debugr	Debug Tool to Watch Objects/Expressions While Running an R Script
2018-07-30	DecisionAnalysis	Implementation of Multi Objective Decision Analysis
2018-07-30	dotCall64	Enhanced Foreign Function Interface Supporting Long Vectors
2018-07-30	draw	Wrapper Functions for Producing Graphics
2018-07-30	emil	Evaluation of Modeling without Information Leakage
2018-07-30	frailtypack	General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction
2018-07-30	glassoFast	Fast Graphical LASSO
2018-07-30	gllvm	Generalized Linear Latent Variable Models
2018-07-30	glycanr	Tools for Analysing N-Glycan Data
2018-07-30	gren	Adaptive Group-Regularized Logistic Elastic Net Regression
2018-07-30	growthcurver	Simple Metrics to Summarize Growth Curves
2018-07-30	IntClust	Integration of Multiple Data Sets with Clustering Techniques
2018-07-30	lilikoi	Metabolomics Personalized Pathway Analysis Tool
2018-07-30	lintools	Manipulation of Linear Systems of (in)Equalities
2018-07-30	logitnorm	Functions for the Logitnormal Distribution
2018-07-30	MultipleBubbles	Test and Detection of Explosive Behaviors for Time Series
2018-07-30	NitrogenUptake2016	Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata
2018-07-30	openssl	Toolkit for Encryption, Signatures and Certificates Based on OpenSSL
2018-07-30	PHEindicatormethods	Common Public Health Statistics and their Confidence Intervals
2018-07-30	poolVIM	Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance
2018-07-30	qsub	Running Commands Remotely on 'Gridengine' Clusters
2018-07-30	QuClu	Quantile-Based Clustering Algorithms
2018-07-30	REIDS	Random Effects for the Identification of Differential Splicing
2018-07-30	rLandsat	Landsat Data Complete Download Process
2018-07-30	Rmpfr	R MPFR - Multiple Precision Floating-Point Reliable
2018-07-30	roloc	Convert Colour Specification to Colour Name
2018-07-30	RSDA	R to Symbolic Data Analysis
2018-07-30	rspa	Adapt Numerical Records to Fit (in)Equality Restrictions
2018-07-30	Rspc	Nelson Rules for Control Charts
2018-07-30	ruin	Simulation of Various Risk Processes
2018-07-30	scoringRules	Scoring Rules for Parametric and Simulated Distribution Forecasts
2018-07-30	SIRE	Finding Feedback Effects in SEM and Testing for Their Significance
2018-07-30	stinepack	Stineman, a Consistently Well Behaved Method of Interpolation
2018-07-30	swdft	Sliding Window Discrete Fourier Transform (SWDFT)
2018-07-30	syt	Standard Young Tableaux
2018-07-30	trafo	Estimation, Comparison and Selection of Transformations
2018-07-30	trend	Non-Parametric Trend Tests and Change-Point Detection
2018-07-30	udpipe	Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
2018-07-29	arulesSequences	Mining Frequent Sequences
2018-07-29	copulaedas	Estimation of Distribution Algorithms Based on Copulas
2018-07-29	DeclareDesign	Declare and Diagnose Research Designs
2018-07-29	dfpk	Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials
2018-07-29	diffobj	Diffs for R Objects
2018-07-29	fts	R Interface to 'tslib' (a Time Series Library in C++)
2018-07-29	funcy	Functional Clustering Algorithms
2018-07-29	geoR	Analysis of Geostatistical Data
2018-07-29	GGIR	Raw Accelerometer Data Analysis
2018-07-29	HDclust	Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks
2018-07-29	metaDigitise	Extract and Summarise Data from Published Figures
2018-07-29	MortalityLaws	Parametric Mortality Models, Life Tables and HMD
2018-07-29	pssmooth	Flexible and Efficient Evaluation of Principal Surrogates/Treatment Effect Modifiers
2018-07-29	RcppCNPy	Read-Write Support for 'NumPy' Files via 'Rcpp'
2018-07-29	reghelper	Helper Functions for Regression Analysis
2018-07-29	rerf	Randomer Forest
2018-07-29	rise	Conduct RISE Analysis
2018-07-29	siplab	Spatial Individual-Plant Modelling
2018-07-29	sylly	Hyphenation and Syllable Counting for Text Analysis
2018-07-29	taRifx	Collection of Utility and Convenience Functions
2018-07-29	tensorA	Advanced Tensor Arithmetic with Named Indices
2018-07-29	tm	Text Mining Package
2018-07-28	ActisoftR	A Toolbox for Parsing Scored Actigraphy Data
2018-07-28	catR	Generation of IRT Response Patterns under Computerized Adaptive Testing
2018-07-28	demu	Optimal Design Emulators via Point Processes
2018-07-28	dexterMST	CML Calibration of Multi Stage Tests
2018-07-28	e1071	Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2018-07-28	ems	Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units
2018-07-28	fedregs	Text Analysis of the US Code of Federal Regulations
2018-07-28	fingertipscharts	Produce Charts that you See on the Fingertips Website
2018-07-28	FossilSim	Simulation of Fossil and Taxonomy Data
2018-07-28	fredr	An R Client for the 'FRED' API
2018-07-28	Hapi	Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells
2018-07-28	InSilicoVA	Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
2018-07-28	InterVA5	Replicate and Analyse 'InterVA5'
2018-07-28	labelVector	Label Attributes for Atomic Vectors
2018-07-28	makedummies	Create Dummy Variables from Categorical Data
2018-07-28	optimParallel	Parallel Versions of the Gradient-Based optim() Methods
2018-07-28	RanglaPunjab	Displays Palette of 5 Colors
2018-07-28	sensitivity	Global Sensitivity Analysis of Model Outputs
2018-07-28	shinyanimate	Animation for 'shiny' Elements
2018-07-28	spatstat.utils	Utility Functions for 'spatstat'
2018-07-28	streamR	Access to Twitter Streaming API via R
2018-07-28	SurvTrunc	Analysis of Doubly Truncated Data
2018-07-28	trread	Transit File Reader
2018-07-28	woeBinning	Supervised Weight of Evidence Binning of Numeric Variables and Factors
2018-07-28	xpose	Diagnostics for Pharmacometric Models
2018-07-27	aws.signature	Amazon Web Services Request Signatures
2018-07-27	BinQuasi	Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
2018-07-27	bootnet	Bootstrap Methods for Various Network Estimation Routines
2018-07-27	CBCgrps	Compare Baseline Characteristics Between Groups
2018-07-27	CSeqpat	Frequent Contiguous Sequential Pattern Mining of Text
2018-07-27	epanet2toolkit	Call 'EPANET' Functions to Simulate Pipe Networks
2018-07-27	exact2x2	Exact Tests and Confidence Intervals for 2x2 Tables
2018-07-27	funLBM	Model-Based Co-Clustering of Functional Data
2018-07-27	geomorph	Geometric Morphometric Analyses of 2D/3D Landmark Data
2018-07-27	ggpage	Creates Page Layout Visualizations
2018-07-27	googlePolylines	Encoding Coordinates into 'Google' Polylines
2018-07-27	igraph	Network Analysis and Visualization
2018-07-27	mable	Maximum Approximate Bernstein Likelihood Estimation
2018-07-27	mdir.logrank	Multiple-Direction Logrank Test
2018-07-27	mice	Multivariate Imputation by Chained Equations
2018-07-27	MMDvariance	Detecting Differentially Variable Genes Using the Mixture of Marginal Distributions
2018-07-27	MonetDBLite	In-Process Version of 'MonetDB'
2018-07-27	munsellinterpol	Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
2018-07-27	nimble	MCMC, Particle Filtering, and Programmable Hierarchical Modeling
2018-07-27	opencpu	Producing and Reproducing Results
2018-07-27	perturbR	Random Perturbation of Count Matrices
2018-07-27	polyclip	Polygon Clipping
2018-07-27	postal	United States Postal Service API Interface
2018-07-27	rncl	An Interface to the Nexus Class Library
2018-07-27	robustbase	Basic Robust Statistics
2018-07-27	roxygen2	In-Line Documentation for R
2018-07-27	RPS	Resistant Procrustes Superimposition
2018-07-27	rrtable	Reproducible Research with a Table of R Codes
2018-07-27	RSentiment	Analyse Sentiment of English Sentences
2018-07-27	rviewgraph	Animated Graph Layout Viewer
2018-07-27	SemNetCleaner	An Automated Cleaning Tool for Semantic and Linguistic Data
2018-07-27	tidymodels	Easily Install and Load the 'Tidymodels' Packages
2018-07-27	UnitCircle	Check if Roots of a Polynomial Lie Outside the Unit Circle
2018-07-27	updog	Flexible Genotyping for Polyploids
2018-07-27	WeibullR	Weibull Analysis for Reliability Engineering
2018-07-27	wosr	Clients to the 'Web of Science' and 'InCites' APIs
2018-07-26	aws.ec2metadata	Get EC2 Instance Metadata
2018-07-26	basicTrendline	Add Trendline and Confidence Interval of Basic Regression Models to Plot
2018-07-26	CEC	Cross-Entropy Clustering
2018-07-26	clusterCrit	Clustering Indices
2018-07-26	conjoint	An Implementation of Conjoint Analysis Method
2018-07-26	dnr	Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family
2018-07-26	errors	Uncertainty Propagation for R Vectors
2018-07-26	germinationmetrics	Seed Germination Indices and Curve Fitting
2018-07-26	GPoM	Generalized Polynomial Modelling
2018-07-26	INLABMA	Bayesian Model Averaging with INLA
2018-07-26	lspls	LS-PLS Models
2018-07-26	NeuralNetTools	Visualization and Analysis Tools for Neural Networks
2018-07-26	numOSL	Numeric Routines for Optically Stimulated Luminescence Dating
2018-07-26	pec	Prediction Error Curves for Risk Prediction Models in Survival Analysis
2018-07-26	penalizedSVM	Feature Selection SVM using Penalty Functions
2018-07-26	projmanr	Project Management Tools
2018-07-26	prozor	Minimal Protein Set Explaining Peptide Spectrum Matches
2018-07-26	reconstructr	Session Reconstruction and Analysis
2018-07-26	regplot	Enhanced Regression Nomogram Plot
2018-07-26	ridge	Ridge Regression with Automatic Selection of the Penalty Parameter
2018-07-26	RonFHIR	Read and Search Interface to the 'HL7 FHIR' REST API
2018-07-26	SPCAvRP	Sparse Principal Component Analysis via Random Projections (SPCAvRP)
2018-07-26	stepp	Subpopulation Treatment Effect Pattern Plot (STEPP)
2018-07-26	swgee	Simulation Extrapolation Inverse Probability Weighted Generalized Estimating Equations
2018-07-25	bnclassify	Learning Discrete Bayesian Network Classifiers from Data
2018-07-25	broman	Karl Broman's R Code
2018-07-25	clifro	Easily Download and Visualise Climate Data from CliFlo
2018-07-25	colorscience	Color Science Methods and Data
2018-07-25	dbplyr	A 'dplyr' Back End for Databases
2018-07-25	exprso	Rapid Deployment of Machine Learning Algorithms
2018-07-25	forward	Robust Analysis using Forward Search
2018-07-25	GREP2	GEO RNA-Seq Experiments Processing Pipeline
2018-07-25	jetpack	A Friendly Package Manager
2018-07-25	ks	Kernel Smoothing
2018-07-25	laGP	Local Approximate Gaussian Process Regression
2018-07-25	MapGAM	Mapping Smoothed Effect Estimates from Individual-Level Data
2018-07-25	measures	Performance Measures for Statistical Learning
2018-07-25	metap	Meta-Analysis of Significance Values
2018-07-25	MmgraphR	Graphing for Markov, Hidden Markov, and Mixture Transition Distribution Models
2018-07-25	netCoin	Interactive Analytic Networks
2018-07-25	NetworkToolbox	Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis
2018-07-25	oddsratio	Odds Ratio Calculation for GAM(M)s & GLM(M)s
2018-07-25	propr	Calculating Proportionality Between Vectors of Compositional Data
2018-07-25	RTransferEntropy	Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy
2018-07-25	shinyjqui	'jQuery UI' Interactions and Effects for Shiny
2018-07-25	simglm	Simulate Models Based on the Generalized Linear Model
2018-07-25	SmartEDA	Summarize and Explore the Data
2018-07-25	sparsepp	'Rcpp' Interface to 'sparsepp'
2018-07-25	stars	Scalable, Spatiotemporal Tidy Arrays for R
2018-07-25	textTinyR	Text Processing for Small or Big Data Files
2018-07-25	umap	Uniform Manifold Approximation and Projection
2018-07-25	weibulltools	Statistical Methods for Life Data Analysis
2018-07-25	yaml	Methods to Convert R Data to YAML and Back
2018-07-24	aftgee	Accelerated Failure Time Model with Generalized Estimating Equations
2018-07-24	anMC	Compute High Dimensional Orthant Probabilities
2018-07-24	CAISEr	Comparison of Algorithms with Iterative Sample Size Estimation
2018-07-24	CaliCo	Code Calibration in a Bayesian Framework
2018-07-24	emdi	Estimating and Mapping Disaggregated Indicators
2018-07-24	ERSA	Exploratory Regression 'Shiny' App
2018-07-24	icr	Compute Krippendorff's Alpha
2018-07-24	inlabru	Spatial Inference using Integrated Nested Laplace Approximation
2018-07-24	mvst	Bayesian Inference for the Multivariate Skew-t Model
2018-07-24	pcr	Analyzing Real-Time Quantitative PCR Data
2018-07-24	piecewiseSEM	Piecewise Structural Equation Modeling
2018-07-24	Rhpc	Permits *apply() Style Dispatch for 'HPC'
2018-07-24	RhpcBLASctl	Control the Number of Threads on 'BLAS'
2018-07-24	Rnightlights	Satellite Nightlight Data Extraction
2018-07-24	safer	Encrypt and Decrypt Strings, R Objects and Files
2018-07-24	sdcTable	Methods for Statistical Disclosure Control in Tabular Data
2018-07-24	sigQC	Quality Control Metrics for Gene Signatures
2018-07-24	spectrolab	Class and Methods for Hyperspectral Data
2018-07-24	surveillance	Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2018-07-24	sys	Portable System Utilities
2018-07-24	taxize	Taxonomic Information from Around the Web
2018-07-24	yaImpute	Nearest Neighbor Observation Imputation and Evaluation Tools
2018-07-23	augSIMEX	Analysis of Data with Mixed Measurement Error and Misclassification in Covariates
2018-07-23	auk	eBird Data Extraction and Processing with AWK
2018-07-23	bst	Gradient Boosting
2018-07-23	conf	Visualization and Analysis of Statistical Measures of Confidence
2018-07-23	Copula.Markov	Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series
2018-07-23	ctmcd	Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
2018-07-23	diffdf	Dataframe Difference Tool
2018-07-23	distrDoc	Documentation for 'distr' Family of R Packages
2018-07-23	distrEllipse	S4 Classes for Elliptically Contoured Distributions
2018-07-23	distrRmetrics	Distribution Classes for Distributions from Rmetrics
2018-07-23	distrSim	Simulation Classes Based on Package 'distr'
2018-07-23	distrTEst	Estimation and Testing Classes Based on Package 'distr'
2018-07-23	future	Unified Parallel and Distributed Processing in R for Everyone
2018-07-23	GPM	Gaussian Process Modeling of Multi-Response Datasets
2018-07-23	ibd	Incomplete Block Designs
2018-07-23	mapsapi	'sf'-Compatible Interface to 'Google Maps' APIs
2018-07-23	matrixStats	Functions that Apply to Rows and Columns of Matrices (and to Vectors)
2018-07-23	meta4diag	Meta-Analysis for Diagnostic Test Studies
2018-07-23	moonBook	Functions and Datasets for the Book by Keon-Woong Moon
2018-07-23	MuMIn	Multi-Model Inference
2018-07-23	nmaINLA	Network Meta-Analysis using Integrated Nested Laplace Approximations
2018-07-23	Nonpareil	Metagenome Coverage Estimation and Projections for 'Nonpareil'
2018-07-23	officer	Manipulation of Microsoft Word and PowerPoint Documents
2018-07-23	osqp	Quadratic Programming Solver using the 'OSQP' Library
2018-07-23	Rcpp	Seamless R and C++ Integration
2018-07-23	RRPP	Linear Model Evaluation with Randomized Residuals in a Permutation Procedure
2018-07-23	samplesize4surveys	Sample Size Calculations for Complex Surveys
2018-07-23	splitstackshape	Stack and Reshape Datasets After Splitting Concatenated Values
2018-07-23	summarytools	Tools to Quickly and Neatly Summarize Data
2018-07-23	TeachingSampling	Selection of Samples and Parameter Estimation in Finite Population
2018-07-23	textclean	Text Cleaning Tools
2018-07-23	WordR	Rendering Word Documents with R Inline Code
2018-07-23	xmrr	Generate XMR Control Chart Data from Time-Series Data
2018-07-22	BigVAR	Dimension Reduction Methods for Multivariate Time Series
2018-07-22	BRISC	Fast Inference for Large Spatial Datasets using BRISC
2018-07-22	CAinterprTools	Graphical Aid in Correspondence Analysis Interpretation and Significance Testings
2018-07-22	distrEx	Extensions of Package 'distr'
2018-07-22	dsr	Compute Directly Standardized Rates, Ratios and Differences
2018-07-22	envnames	Track User-Defined Environment Names
2018-07-22	eurostat	Tools for Eurostat Open Data
2018-07-22	forecastHybrid	Convenient Functions for Ensemble Time Series Forecasts
2018-07-22	fpeek	Check Text Files Content at a Glance
2018-07-22	ggiraphExtra	Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
2018-07-22	imagerExtra	Extra Image Processing Library Based on 'imager'
2018-07-22	linkspotter	Bivariate Correlations Calculation and Visualization
2018-07-22	movecost	Calculation of Accumulated Cost Surface and Least-Cost Paths Related to Human Movement Across the Landscape
2018-07-22	MSbox	Mass Spectrometry Tools
2018-07-22	NlinTS	Non Linear Time Series Analysis
2018-07-22	rbit	Binary Indexed Tree
2018-07-22	RGF	Regularized Greedy Forest
2018-07-22	sparr	Spatial and Spatiotemporal Relative Risk
2018-07-22	sundialr	An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers
2018-07-22	support	Support Points
2018-07-22	survutils	Utility Functions for Survival Analysis
2018-07-22	ztable	Zebra-Striped Tables in LaTeX and HTML Formats
2018-07-21	BAMBI	Bivariate Angular Mixture Models
2018-07-21	cleandata	Functions to Inspect, Impute, and Encode Data, and to Keep Track of This Process
2018-07-21	compound.Cox	Univariate Feature Selection and Compound Covariate for Predicting Survival
2018-07-21	diffusionMap	Diffusion Map
2018-07-21	dlookr	Tools for Data Diagnosis, Exploration, Transformation
2018-07-21	dtwclust	Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
2018-07-21	elmNNRcpp	The Extreme Learning Machine Algorithm
2018-07-21	geojsonR	A GeoJson Processing Toolkit
2018-07-21	ggpval	Annotate Statistical Tests for 'ggplot2'
2018-07-21	mpath	Regularized Linear Models
2018-07-21	multistateutils	Utility Functions for Parametric Multi-State Models
2018-07-21	nmslibR	Non Metric Space (Approximate) Library
2018-07-21	nngeo	k-Nearest Neighbor Join for Spatial Data
2018-07-21	R.devices	Unified Handling of Graphics Devices
2018-07-21	rda	Shrunken Centroids Regularized Discriminant Analysis
2018-07-21	semds	Structural Equation Multidimensional Scaling
2018-07-21	spagmix	Artificial Spatial and Spatiotemporal Densities on Bounded Windows
2018-07-21	statnetWeb	A Graphical User Interface for Network Modeling with 'Statnet'
2018-07-21	wdman	'Webdriver'/'Selenium' Binary Manager
2018-07-20	anyLib	Install and Load Any Package from CRAN, Bioconductor or Github
2018-07-20	arsenal	An Arsenal of 'R' Functions for Large-Scale Statistical Summaries
2018-07-20	BALCONY	Better ALignment CONsensus analYsis
2018-07-20	BNSP	Bayesian Non- And Semi-Parametric Model Fitting
2018-07-20	brms	Bayesian Regression Models using 'Stan'
2018-07-20	calibrateBinary	Calibration for Computer Experiments with Binary Responses
2018-07-20	caTools	Tools: moving window statistics, GIF, Base64, ROC AUC, etc
2018-07-20	FKF	Fast Kalman Filter
2018-07-20	foreign	Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
2018-07-20	forestControl	Approximate False Positive Rate Control in Selection Frequency for Random Forest
2018-07-20	fpc	Flexible Procedures for Clustering
2018-07-20	gam	Generalized Additive Models
2018-07-20	ggstance	Horizontal 'ggplot2' Components
2018-07-20	ggvoronoi	Voronoi Diagrams and Heatmaps with 'ggplot2'
2018-07-20	gifski	Highest Quality GIF Encoder
2018-07-20	insect	Informatic Sequence Classification Trees
2018-07-20	jstor	Read Data from JSTOR/DfR
2018-07-20	lazy	Lazy Learning for Local Regression
2018-07-20	lumberjack	Track Changes in Data
2018-07-20	MortalityGaps	The Double-Gap Life Expectancy Forecasting Model
2018-07-20	plotly	Create Interactive Web Graphics via 'plotly.js'
2018-07-20	POCRE	Penalized Orthogonal-Components Regression
2018-07-20	ppls	Penalized Partial Least Squares
2018-07-20	rcheology	Data on Base Packages for Current and Previous Versions of R
2018-07-20	redland	RDF Library Bindings in R
2018-07-20	replyr	Patches to Use 'dplyr' on Remote Data Sources
2018-07-20	Rfast	A Collection of Efficient and Extremely Fast R Functions
2018-07-20	rhierbaps	Clustering Genetic Sequence Data Using the HierBAPS Algorithm
2018-07-20	sampler	Sample Design, Drawing & Data Analysis Using Data Frames
2018-07-20	seplyr	Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks
2018-07-20	Seurat	Tools for Single Cell Genomics
2018-07-20	simmer	Discrete-Event Simulation for R
2018-07-20	spant	MR Spectroscopy Analysis Tools
2018-07-20	spatsoc	Group Animal Relocation Data by Spatial and Temporal Relationship
2018-07-20	spind	Spatial Methods and Indices
2018-07-20	spm	Spatial Predictive Modeling
2018-07-20	SpNetPrep	Linear Network Preprocessing for Spatial Statistics
2018-07-20	spp	ChIP-Seq Processing Pipeline
2018-07-20	stringi	Character String Processing Facilities
2018-07-20	trimcluster	Cluster Analysis with Trimming
2018-07-20	vagalumeR	Access to the 'Vagalume' API
2018-07-20	vtreat	A Statistically Sound 'data.frame' Processor/Conditioner
2018-07-20	wilson	Web-Based Interactive Omics Visualization
2018-07-20	WVPlots	Common Plots for Analysis
2018-07-19	ApacheLogProcessor	Process the Apache Web Server Log Files
2018-07-19	baytrends	Long Term Water Quality Trend Analysis
2018-07-19	BE	Bioequivalence Study Data Analysis
2018-07-19	blastula	Easily Send HTML Email Messages
2018-07-19	bor	Transforming Behavioral Observation Records into Data Matrices
2018-07-19	CKLRT	Composite Kernel Machine Regression Based on Likelihood Ratio Test
2018-07-19	dbhydroR	'DBHYDRO' Hydrologic and Water Quality Data
2018-07-19	excursions	Excursion Sets and Contour Credibility Regions for Random Fields
2018-07-19	gmat	Simulation of Graphically Constrained Matrices
2018-07-19	groupedstats	Grouped Statistical Analyses in a Tidy Way
2018-07-19	GWASinlps	Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies
2018-07-19	happytime	Two Games to Relieve the Boredom
2018-07-19	httpuv	HTTP and WebSocket Server Library
2018-07-19	HydeNet	Hybrid Bayesian Networks Using R and JAGS
2018-07-19	logistf	Firth's Bias-Reduced Logistic Regression
2018-07-19	mkin	Kinetic Evaluation of Chemical Degradation Data
2018-07-19	mlmm.gwas	Pipeline for GWAS Using MLMM
2018-07-19	ncar	Noncompartmental Analysis for Pharmacokinetic Report
2018-07-19	NonCompart	Noncompartmental Analysis for Pharmacokinetic Data
2018-07-19	npsf	Nonparametric and Stochastic Efficiency and Productivity Analysis
2018-07-19	portes	Portmanteau Tests for Univariate and Multivariate Time. Series Models
2018-07-19	RcppParallel	Parallel Programming Tools for 'Rcpp'
2018-07-19	rredlist	'IUCN' Red List Client
2018-07-19	rwalkr	API to Melbourne Pedestrian Data
2018-07-19	sdmpredictors	Species Distribution Modelling Predictor Datasets
2018-07-19	serieslcb	Lower Confidence Bounds for Binomial Series System
2018-07-19	shadow	Geometric Shadow Calculations
2018-07-19	sigr	Succinct and Correct Statistical Summaries for Reports
2018-07-19	spacesRGB	Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ
2018-07-19	table1	Tables of Descriptive Statistics in HTML
2018-07-19	tkrplot	TK Rplot
2018-07-19	tmvmixnorm	Sampling from Truncated Multivariate Normal and t Distributions
2018-07-18	adpss	Design and Analysis of Locally or Globally Efficient Adaptive Designs
2018-07-18	binhf	Haar-Fisz Functions for Binomial Data
2018-07-18	binman	A Binary Download Manager
2018-07-18	CASMAP	Detection of Statistically Significant Combinations of SNPs in Association Mapping
2018-07-18	CliftLRD	Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series
2018-07-18	CNLTreg	Complex-Valued Wavelet Lifting for Signal Denoising
2018-07-18	CNLTtsa	Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
2018-07-18	dynutils	Common Functionality for the 'dynverse' Packages
2018-07-18	emmeans	Estimated Marginal Means, aka Least-Squares Means
2018-07-18	evian	Evidential Analysis of Genetic Association Data
2018-07-18	future.batchtools	A Future API for Parallel and Distributed Processing using 'batchtools'
2018-07-18	future.callr	A Future API for Parallel Processing using 'callr'
2018-07-18	IntNMF	Integrative Clustering of Multiple Genomic Dataset
2018-07-18	liftLRD	Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series
2018-07-18	LS2Wstat	A Multiscale Test of Spatial Stationarity for LS2W Processes
2018-07-18	nanotime	Nanosecond-Resolution Time for R
2018-07-18	qqplotr	Quantile-Quantile Plot Extensions for 'ggplot2'
2018-07-18	r4lineups	Statistical Inference on Lineup Fairness
2018-07-18	r511	Work with the Bay Area Transportation Commission Application Programming Interface
2018-07-18	revengc	Reverse Engineering Decoupled and Censored Data
2018-07-18	rmpw	Causal Mediation Analysis Using Weighting Approach
2018-07-18	rNOMADS	An Interface to the NOAA Operational Model Archive and Distribution System
2018-07-18	robotstxt	A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker
2018-07-18	rzeit2	Client for the ZEIT ONLINE Content API
2018-07-18	SmoothWin	Soft Windowing on Linear Regression
2018-07-18	TangPoemR	Write Chinese Tang Poems
2018-07-18	tatest	Two-Group Ta-Test
2018-07-18	TaxicabCA	Taxicab Correspondence Analysis
2018-07-18	thor	Interface to 'LMDB'
2018-07-18	ukgasapi	API for UK Gas Market Information
2018-07-18	VCA	Variance Component Analysis
2018-07-17	abctools	Tools for ABC Analyses
2018-07-17	BioPET	Biomarker Prognostic Enrichment Tool
2018-07-17	Boruta	Wrapper Algorithm for All Relevant Feature Selection
2018-07-17	broom	Convert Statistical Analysis Objects into Tidy Tibbles
2018-07-17	CATkit	Chronomics Analysis Toolkit (CAT): Periodicity Analysis
2018-07-17	catlearn	Formal Psychological Models of Categorization and Learning
2018-07-17	chemCal	Calibration Functions for Analytical Chemistry
2018-07-17	CodeDepends	Analysis of R Code for Reproducible Research and Code Comprehension
2018-07-17	DeLorean	Estimates Pseudotimes for Single Cell Expression Data
2018-07-17	dextergui	A Graphic User Interface to Dexter
2018-07-17	dgo	Dynamic Estimation of Group-Level Opinion
2018-07-17	easyDes	An Easy Way to Descriptive Analysis
2018-07-17	evaluate	Parsing and Evaluation Tools that Provide More Details than the Default
2018-07-17	extracat	Categorical Data Analysis and Visualization
2018-07-17	GENEAread	Package for Reading Binary Files
2018-07-17	git2r	Provides Access to Git Repositories
2018-07-17	glue	Interpreted String Literals
2018-07-17	lavaSearch2	Tools for Model Specification in the Latent Variable Framework
2018-07-17	pinp	'pinp' is not 'PNAS'
2018-07-17	questionr	Functions to Make Surveys Processing Easier
2018-07-17	rcorpora	A Collection of Small Text Corpora of Interesting Data
2018-07-17	rmda	Risk Model Decision Analysis
2018-07-17	RRF	Regularized Random Forest
2018-07-17	RTransProb	Analyze and Forecast Credit Migrations
2018-07-17	scatterpie	Scatter Pie Plot
2018-07-17	SimDesign	Structure for Organizing Monte Carlo Simulation Designs
2018-07-17	spacetime	Classes and Methods for Spatio-Temporal Data
2018-07-16	APtools	Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times
2018-07-16	Arothron	Geometric Morphometrics Analyses
2018-07-16	available	Check if the Title of a Package is Available, Appropriate and Interesting
2018-07-16	ballr	Access to Current and Historical Basketball Data
2018-07-16	BayesianTools	General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
2018-07-16	beyondWhittle	Bayesian Spectral Inference for Stationary Time Series
2018-07-16	DendroSync	A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
2018-07-16	dmm	Dyadic Mixed Model for Pedigree Data
2018-07-16	GCalignR	Simple Peak Alignment for Gas-Chromatography Data
2018-07-16	ggpmisc	Miscellaneous Extensions to 'ggplot2'
2018-07-16	InterSIM	Simulation of Inter-Related Genomic Datasets
2018-07-16	keyring	Access the System Credential Store from R
2018-07-16	lavaan	Latent Variable Analysis
2018-07-16	Mediana	Clinical Trial Simulations
2018-07-16	modeltools	Tools and Classes for Statistical Models
2018-07-16	MSwM	Fitting Markov Switching Models
2018-07-16	NHPoisson	Modelling and Validation of Non Homogeneous Poisson Processes
2018-07-16	ordinalForest	Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables
2018-07-16	ordinalgmifs	Ordinal Regression for High-Dimensional Data
2018-07-16	physiology	Calculate Physiological Characteristics of Adults, Children and Infants
2018-07-16	PINSPlus	Clustering Algorithm for Data Integration and Disease Subtyping
2018-07-16	pixiedust	Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2018-07-16	RANN	Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric
2018-07-16	rdmulti	Analysis of RD Designs with Multiple Cutoffs or Scores
2018-07-16	rFerns	Random Ferns Classifier
2018-07-16	RKEEL	Using KEEL in R Code
2018-07-16	rmweather	Tools to Conduct Meteorological Normalisation on Air Quality Data
2018-07-16	Rsmlx	R Speaks 'Monolix'
2018-07-16	spacyr	Wrapper to the 'spaCy' 'NLP' Library
2018-07-16	SUMMER	Spatio-Temporal Under-Five Mortality Methods for Estimation
2018-07-16	tstools	A Time Series Toolbox for Official Statistics
2018-07-16	vdmR	Visual Data Mining Tools
2018-07-16	WRTDStidal	Weighted Regression for Water Quality Evaluation in Tidal Waters
2018-07-16	xts	eXtensible Time Series
2018-07-16	zoo	S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2018-07-15	benchr	High Precise Measurement of R Expressions Execution Time
2018-07-15	blogdown	Create Blogs and Websites with R Markdown
2018-07-15	cowplot	Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2018-07-15	EnvStats	Package for Environmental Statistics, Including US EPA Guidance
2018-07-15	gaston	Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
2018-07-15	ggiraph	Make 'ggplot2' Graphics Interactive
2018-07-15	ggpol	Visualizing Social Science Data with 'ggplot2'
2018-07-15	GreedyExperimentalDesign	Greedy Experimental Design Construction
2018-07-15	GreedyExperimentalDesignJARs	GreedyExperimentalDesign JARs
2018-07-15	hypervolume	High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls
2018-07-15	LSDsensitivity	Sensitivity Analysis Tools for LSD
2018-07-15	modules	Self Contained Units of Source Code
2018-07-15	quanteda	Quantitative Analysis of Textual Data
2018-07-15	RcppClassic	Deprecated 'classic' 'Rcpp' 'API'
2018-07-15	RCurl	General Network (HTTP/FTP/...) Client Interface for R
2018-07-15	sValues	Measures of the Sturdiness of Regression Coefficients
2018-07-15	tufte	Tufte's Styles for R Markdown Documents
2018-07-14	bayesAB	Fast Bayesian Methods for AB Testing
2018-07-14	BiodiversityR	Package for Community Ecology and Suitability Analysis
2018-07-14	gmp	Multiple Precision Arithmetic
2018-07-14	icenReg	Regression Models for Interval Censored Data
2018-07-14	inlmisc	Miscellaneous Functions for the USGS INL Project Office
2018-07-14	MODIStsp	A Tool for Automating Download and Preprocessing of MODIS Land Products Data
2018-07-14	pillar	Coloured Formatting for Columns
2018-07-14	Rlinsolve	Iterative Solvers for (Sparse) Linear System of Equations
2018-07-14	SpaDES.tools	Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models
2018-07-14	splm	Econometric Models for Spatial Panel Data
2018-07-14	whitening	Whitening and High-Dimensional Canonical Correlation Analysis
2018-07-13	DTWUMI	Imputation of Multivariate Time Series Based on Dynamic Time Warping
2018-07-13	dynRB	Dynamic Range Boxes
2018-07-13	eha	Event History Analysis
2018-07-13	fakemake	Mock the Unix Make Utility
2018-07-13	FRK	Fixed Rank Kriging
2018-07-13	geodist	Fast, Dependency-Free Geodesic Distance Calculations
2018-07-13	geostatsp	Geostatistical Modelling with Likelihood and Bayes
2018-07-13	gginnards	Explore the Innards of 'ggplot2' Objects
2018-07-13	glasso	Graphical Lasso: Estimation of Gaussian Graphical Models
2018-07-13	googlenlp	An Interface to Google's Cloud Natural Language API
2018-07-13	htree	Historical Tree Ensembles for Longitudinal Data
2018-07-13	incadata	Recognize and Handle Data in Formats Used by Swedish Cancer Centers
2018-07-13	iterators	Provides Iterator Construct for R
2018-07-13	joint.Cox	Penalized Likelihood Estimation and Dynamic Prediction under the Joint Frailty-Copula Models Between Tumour Progression and Death for Meta-Analysis
2018-07-13	modelgrid	A Framework for Creating, Managing and Training Multiple Caret Models
2018-07-13	nlaR	Interface to the National Lakes Assessment
2018-07-13	ofGEM	A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data
2018-07-13	OjaNP	Multivariate Methods Based on the Oja Median and Related Concepts
2018-07-13	pgdraw	Generate Random Samples from the Polya-Gamma Distribution
2018-07-13	pompom	Person-Oriented Method and Perturbation on the Model
2018-07-13	protr	Generating Various Numerical Representation Schemes for Protein Sequences
2018-07-13	psycho	Efficient and Publishing-Oriented Workflow for Psychological Science
2018-07-13	Rlda	Bayesian LDA for Mixed-Membership Clustering Analysis
2018-07-13	RMark	R Code for Mark Analysis
2018-07-13	rscala	Bridge Between 'R' and 'Scala' with Callbacks
2018-07-13	sgmodel	Solves a Generic Stochastic Growth Model with a Representative Agent
2018-07-13	spacesXYZ	CIE XYZ and some of Its Derived Color Spaces
2018-07-13	spCP	Spatially Varying Change Points
2018-07-13	survival	Survival Analysis
2018-07-12	CAST	'caret' Applications for Spatial-Temporal Models
2018-07-12	CorShrink	Adaptive Shrinkage of Correlation and Covariance Matrices
2018-07-12	descomponer	Seasonal Adjustment by Frequency Analysis
2018-07-12	diseasemapping	Modelling Spatial Variation in Disease Risk for Areal Data
2018-07-12	dkanr	Client for the 'DKAN' API
2018-07-12	estimatr	Fast Estimators for Design-Based Inference
2018-07-12	gambin	Fit the Gambin Model to Species Abundance Distributions
2018-07-12	gDefrag	Graph-Based Landscape De-Fragmentation
2018-07-12	gemlog	File Conversion for 'Gem Infrasound Logger'
2018-07-12	generalCorr	Generalized Correlations and Initial Causal Path
2018-07-12	ggspatial	Spatial Data Framework for ggplot2
2018-07-12	irace	Iterated Racing for Automatic Algorithm Configuration
2018-07-12	JGR	Java GUI for R
2018-07-12	LipidMS	Lipid Annotation for LC-MS/MS using Data Independent Acquisition
2018-07-12	MAGNAMWAR	A Pipeline for Meta-Genome Wide Association
2018-07-12	multifluo	Dealing with Several Images of a Same Object Constituted of Different Zones
2018-07-12	optmatch	Functions for Optimal Matching
2018-07-12	penalized	L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model
2018-07-12	poliscidata	Datasets and Functions Featured in Pollock and Edwards, An R Companion to Essentials of Political Analysis, Second Edition
2018-07-12	qGaussian	The q-Gaussian Distribution
2018-07-12	rdrobust	Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2018-07-12	Rlabkey	Data Exchange Between R and 'LabKey' Server
2018-07-12	RSSL	Implementations of Semi-Supervised Learning Approaches for Classification
2018-07-12	spass	Study Planning and Adaptation of Sample Size
2018-07-12	washeR	Time Series Outlier Detection
2018-07-12	xdcclarge	Estimating a (c)DCC-GARCH Model in Large Dimensions
2018-07-12	xwf	Extrema-Weighted Feature Extraction
2018-07-11	AdaptGauss	Gaussian Mixture Models (GMM)
2018-07-11	BCEA	Bayesian Cost Effectiveness Analysis
2018-07-11	bigmatch	Making Optimal Matching Size-Scalable Using Optimal Calipers
2018-07-11	bipartite	Visualising Bipartite Networks and Calculating Some (Ecological) Indices
2018-07-11	bmlm	Bayesian Multilevel Mediation
2018-07-11	desctable	Produce Descriptive and Comparative Tables Easily
2018-07-11	Directional	Directional Statistics
2018-07-11	DisImpact	Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups
2018-07-11	distr	Object Oriented Implementation of Distributions
2018-07-11	dpmixsim	Dirichlet Process Mixture Model Simulation for Clustering and Image Segmentation
2018-07-11	DTWBI	Imputation of Time Series Based on Dynamic Time Warping
2018-07-11	dygraphs	Interface to 'Dygraphs' Interactive Time Series Charting Library
2018-07-11	erah	Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
2018-07-11	etm	Empirical Transition Matrix
2018-07-11	highriskzone	Determining and Evaluating High-Risk Zones
2018-07-11	llama	Leveraging Learning to Automatically Manage Algorithms
2018-07-11	metansue	Meta-Analysis of Studies with Non Statistically-Significant Unreported Effects
2018-07-11	nabor	Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2018-07-11	pavo	Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2018-07-11	polyPK	The Pharmacokinetics (PK) of Multi-Component Drugs Using a Metabolomics Approach
2018-07-11	PrevMap	Geostatistical Modelling of Spatially Referenced Prevalence Data
2018-07-11	QCA	Qualitative Comparative Analysis
2018-07-11	randomizr	Easy-to-Use Tools for Common Forms of Random Assignment and Sampling
2018-07-11	Rdrools	A Rules Engine Based on 'Drools'
2018-07-11	RProtoBuf	R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
2018-07-11	spaero	Software for Project AERO
2018-07-11	startupmsg	Utilities for Start-Up Messages
2018-07-11	tauturri	Get Data Out of 'Tautulli' (Formerly 'PlexPy')
2018-07-11	tweet2r	Twitter Collector for R and Export to 'SQLite', 'postGIS' and 'GIS' Format
2018-07-11	xkcd	Plotting ggplot2 Graphics in an XKCD Style
2018-07-10	adlift	An Adaptive Lifting Scheme Algorithm
2018-07-10	AssetCorr	Estimating Asset Correlations from Default Data
2018-07-10	augmentedRCBD	Analysis of Augmented Randomised Complete Block Designs
2018-07-10	banter	BioAcoustic EveNT ClassifiER
2018-07-10	BAwiR	Analysis of Basketball Data
2018-07-10	bayesDP	Tools for the Bayesian Discount Prior Function
2018-07-10	blscrapeR	An API Wrapper for the Bureau of Labor Statistics (BLS)
2018-07-10	cetcolor	CET Perceptually Uniform Colour Maps
2018-07-10	clustree	Visualise Clusterings at Different Resolutions
2018-07-10	CorrectOverloadedPeaks	Correct Overloaded Peaks from GC-APCI-MS Data
2018-07-10	countgmifs	Discrete Response Regression for High-Dimensional Data
2018-07-10	crul	HTTP Client
2018-07-10	DiscreteFDR	Multiple Testing Procedures with Adaptation for Discrete Tests
2018-07-10	foreSIGHT	Systems Insights from Generation of Hydroclimatic Timeseries
2018-07-10	FPCA3D	Three Dimensional Functional Component Analysis
2018-07-10	future.BatchJobs	A Future API for Parallel and Distributed Processing using BatchJobs
2018-07-10	imsig	Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
2018-07-10	memor	A 'rmarkdown' Template that Can be Highly Customized
2018-07-10	MetaSubtract	Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results
2018-07-10	mitml	Tools for Multiple Imputation in Multilevel Modeling
2018-07-10	netdep	Testing for Network Dependence
2018-07-10	nlt	A Nondecimated Lifting Transform for Signal Denoising
2018-07-10	paletteer	Comprehensive Collection of Color Palettes
2018-07-10	pdfsearch	Search Tools for PDF Files
2018-07-10	pdSpecEst	An Analysis Toolbox for Hermitian Positive Definite Matrices
2018-07-10	peakPantheR	Peak Picking and Annotation of High Resolution Experiments
2018-07-10	phenology	Tools to Manage a Parametric Function that Describes Phenology
2018-07-10	poisFErobust	Poisson Fixed Effects Robust
2018-07-10	qicharts2	Quality Improvement Charts
2018-07-10	RGeckoboard	R API for Geckoboard
2018-07-10	Rmagic	MAGIC - Markov Affinity-Based Graph Imputation of Cells
2018-07-10	Rpolyhedra	Polyhedra Database
2018-07-10	rt.test	Robustified t-Test
2018-07-10	SimCorMultRes	Simulates Correlated Multinomial Responses
2018-07-10	sirt	Supplementary Item Response Theory Models
2018-07-10	solvebio	The Official SolveBio API Client
2018-07-10	stablelearner	Stability Assessment of Statistical Learning Methods
2018-07-10	SubgrPlots	Graphical Displays for Subgroup Analysis in Clinical Trials
2018-07-10	syllabifyr	Syllabifier for CMU Dictionary Transcriptions
2018-07-10	TH.data	TH's Data Archive
2018-07-10	xaringan	Presentation Ninja
2018-07-09	ARTool	Aligned Rank Transform
2018-07-09	asbio	A Collection of Statistical Tools for Biologists
2018-07-09	autothresholdr	An R Port of the 'ImageJ' Plugin 'Auto Threshold'
2018-07-09	CommonJavaJars	Useful Libraries for Building a Java Based GUI under R
2018-07-09	corrgram	Plot a Correlogram
2018-07-09	exampletestr	Help for Writing Unit Tests Based on Function Examples
2018-07-09	gMCP	Graph Based Multiple Comparison Procedures
2018-07-09	iNEXT	Interpolation and Extrapolation for Species Diversity
2018-07-09	JuniperKernel	Kernel for 'Jupyter'
2018-07-09	Metrics	Evaluation Metrics for Machine Learning
2018-07-09	ML.MSBD	Maximum Likelihood Inference on Multi-State Trees
2018-07-09	multipanelfigure	Infrastructure to Assemble Multi-Panel Figures (from Grobs)
2018-07-09	pegas	Population and Evolutionary Genetics Analysis System
2018-07-09	photobiology	Photobiological Calculations
2018-07-09	polmineR	Toolkit for Corpus Analysis
2018-07-09	pomp	Statistical Inference for Partially Observed Markov Processes
2018-07-09	rebird	R Client for the eBird Database of Bird Observations
2018-07-09	rhoR	Rho for Inter Rater Reliability
2018-07-09	sidier	Substitution and Indel Distances to Infer Evolutionary Relationships
2018-07-09	spelling	Tools for Spell Checking in R
2018-07-09	wtss	An R Client for a Web Time-Series Service
2018-07-08	agRee	Various Methods for Measuring Agreement
2018-07-08	flatxml	Tools for Working with XML Files as R Dataframes
2018-07-08	HelpersMG	Tools for Earth Meteorological Analysis
2018-07-08	pander	An R 'Pandoc' Writer
2018-07-08	phylopath	Perform Phylogenetic Path Analysis
2018-07-08	rdefra	Interact with the UK AIR Pollution Database from DEFRA
2018-07-08	sft	Functions for Systems Factorial Technology Analysis of Data
2018-07-08	tuneR	Analysis of Music and Speech
2018-07-08	WMWssp	Wilcoxon-Mann-Whitney Sample Size Planning
2018-07-07	betaboost	Boosting Beta Regression
2018-07-07	dbarts	Discrete Bayesian Additive Regression Trees Sampler
2018-07-07	ecm	Build Error Correction Models
2018-07-07	ggforce	Accelerating 'ggplot2'
2018-07-07	ggraph	An Implementation of Grammar of Graphics for Graphs and Networks
2018-07-07	jeek	A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models
2018-07-07	LCAextend	Latent Class Analysis (LCA) with Familial Dependence in Extended Pedigrees
2018-07-07	librarian	Install, Update, Load Packages from CRAN and 'GitHub' in One Step
2018-07-07	mgm	Estimating Time-Varying k-Order Mixed Graphical Models
2018-07-07	mrfDepth	Depth Measures in Multivariate, Regression and Functional Settings
2018-07-07	multinets	Multilevel Networks Analysis
2018-07-07	openVA	Automated Method for Verbal Autopsy
2018-07-07	pkgload	Simulate Package Installation and Attach
2018-07-07	rfPermute	Estimate Permutation p-Values for Random Forest Importance Metrics
2018-07-07	rggobi	Interface Between R and 'GGobi'
2018-07-07	Rpoet	'PoetryDB' API Wrapper
2018-07-07	sdPrior	Scale-Dependent Hyperpriors in Structured Additive Distributional Regression
2018-07-07	SQB	Sequential Bagging on Regression
2018-07-06	AcousticNDLCodeR	Coding Sound Files for Use with NDL
2018-07-06	agridat	Agricultural Datasets
2018-07-06	asnipe	Animal Social Network Inference and Permutations for Ecologists
2018-07-06	BIFIEsurvey	Tools for Survey Statistics in Educational Assessment
2018-07-06	charlatan	Make Fake Data
2018-07-06	CoDiNA	Co-Expression Differential Network Analysis
2018-07-06	CytobankAPI	Cytobank API Wrapper for R
2018-07-06	dendroTools	Linear and Nonlinear Methods for Analyzing Dendroclimatological Data
2018-07-06	devRate	Quantify the Relationship Between Development Rate and Temperature in Ectotherms
2018-07-06	docxtools	Tools for R Markdown to Docx Documents
2018-07-06	ggalluvial	Alluvial Diagrams in 'ggplot2'
2018-07-06	ggfittext	Fit Text Inside a Box in 'ggplot2'
2018-07-06	heatmaply	Interactive Cluster Heat Maps Using 'plotly'
2018-07-06	HGNChelper	Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols
2018-07-06	MALDIquant	Quantitative Analysis of Mass Spectrometry Data
2018-07-06	mbir	Magnitude-Based Inferences
2018-07-06	mdatools	Multivariate Data Analysis for Chemometrics
2018-07-06	meaRtools	Micro-Electro Array (MEA) Analysis
2018-07-06	mnreadR	MNREAD Parameters Estimation and Curve Plotting
2018-07-06	moderndive	Tidyverse-Friendly Introductory Linear Regression
2018-07-06	mousetrap	Process and Analyze Mouse-Tracking Data
2018-07-06	pgbart	Bayesian Additive Regression Trees Using Particle Gibbs Sampler and Gibbs/Metropolis-Hastings Sampler
2018-07-06	pmml	Generate PMML for Various Models
2018-07-06	RcmdrPlugin.orloca	A GUI for Planar Location Problems
2018-07-06	rgbif	Interface to the Global 'Biodiversity' Information Facility API
2018-07-06	rticles	Article Formats for R Markdown
2018-07-06	workflowr	A Framework for Reproducible and Collaborative Data Science
2018-07-06	xfun	Miscellaneous Functions by 'Yihui Xie'
2018-07-05	alignfigR	Visualizing Multiple Sequence Alignments with 'ggplot2'
2018-07-05	aster	Aster Models
2018-07-05	bmixture	Bayesian Estimation for Finite Mixture of Distributions
2018-07-05	bs4Dash	A 'Bootstrap 4' Version of 'shinydashboard'
2018-07-05	doex	One-Way Heteroscedastic ANOVA Tests
2018-07-05	dtangle	Cell Type Deconvolution from Gene Expressions
2018-07-05	ExtMallows	An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation
2018-07-05	fastnet	Large-Scale Social Network Analysis
2018-07-05	fda	Functional Data Analysis
2018-07-05	fingertipsR	Fingertips Data for Public Health
2018-07-05	gppm	Gaussian Process Panel Modeling
2018-07-05	HCmodelSets	Regression with a Large Number of Potential Explanatory Variables
2018-07-05	IntegratedMRF	Integrated Prediction using Uni-Variate and Multivariate Random Forests
2018-07-05	mapsRinteractive	Local Adaptation and Evaluation of Digital Soil Maps
2018-07-05	mason	Build Data Structures for Common Statistical Analysis
2018-07-05	miceadds	Some Additional Multiple Imputation Functions, Especially for 'mice'
2018-07-05	mineCitrus	Extract and Analyze Median Molecule Intensity from 'citrus' Output
2018-07-05	MMAC	Data for Mathematical Modeling and Applied Calculus
2018-07-05	nmixgof	Goodness of Fit Checks for Binomial N-Mixture Models
2018-07-05	packagefinder	Comfortable Search for R Packages on CRAN
2018-07-05	ParallelLogger	Support for Parallel Computation, Logging, and Function Automation
2018-07-05	peRiodiCS	Functions for Generating Periodic Curves
2018-07-05	permDep	Permutation Tests for General Dependent Truncation
2018-07-05	puniform	Meta-Analysis Methods Correcting for Publication Bias
2018-07-05	RNifti	Fast R and C++ Access to NIfTI Images
2018-07-05	rrd	Import Data from a RRD (Round Robin Database) File
2018-07-05	satscanMapper	'SaTScan' (TM) Results Mapper
2018-07-05	scRNAtools	Single Cell RNA Sequencing Data Analysis Tools
2018-07-05	shinydashboardPlus	Add some 'AdminLTE2' Components to 'shinydashboard'
2018-07-05	shinyFiles	A Server-Side File System Viewer for Shiny
2018-07-05	simukde	Simulation with Kernel Density Estimation
2018-07-05	spocc	Interface to Species Occurrence Data Sources
2018-07-05	survMisc	Miscellaneous Functions for Survival Data
2018-07-05	Ternary	An R Package for Creating Ternary Plots
2018-07-05	vosonSML	Tools for Collecting Social Media Data and Generating Networks for Analysis
2018-07-05	weathercan	Download Weather Data from the Environment and Climate Change Canada Website
2018-07-05	xxIRT	Item Response Theory and Computer-Based Testing in R
2018-07-04	bigleaf	Physical and Physiological Ecosystem Properties from Eddy Covariance Data
2018-07-04	Data2LD	Functional Data Analysis with Linear Differential Equations
2018-07-04	EmiStatR	Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems
2018-07-04	epitab	Flexible Contingency Tables for Epidemiology
2018-07-04	GADMTools	Easy Use of 'GADM' Shapefiles
2018-07-04	gghighlight	Highlight Lines and Points in 'ggplot2'
2018-07-04	GGUM	Generalized Graded Unfolding Model
2018-07-04	kernelboot	Smoothed Bootstrap and Random Generation from Kernel Densities
2018-07-04	kmer	Fast K-Mer Counting and Clustering for Biological Sequence Analysis
2018-07-04	mmmgee	Simultaneous Inference for Multiple Linear Contrasts in GEE Models
2018-07-04	pointdensityP	Point Density for Geospatial Data
2018-07-04	RcppMeCab	'rcpp' Wrapper for 'mecab' Library
2018-07-04	Rrdrand	'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2018-07-04	RSAGA	SAGA Geoprocessing and Terrain Analysis
2018-07-04	rsMove	Remote Sensing for Movement Ecology
2018-07-04	SpatialVx	Spatial Forecast Verification
2018-07-04	ssgraph	Bayesian Graphical Estimation using Spike-and-Slab Priors
2018-07-04	swamp	Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations
2018-07-04	timeordered	Time-Ordered and Time-Aggregated Network Analyses
2018-07-04	varhandle	Functions for Robust Variable Handling
2018-07-04	visdat	Preliminary Visualisation of Data
2018-07-04	wtest	The W-Test for Genetic Interactions Testing
2018-07-03	anytime	Anything to 'POSIXct' or 'Date' Converter
2018-07-03	Blendstat	Joint Analysis of Experiments with Mixtures and Random Effects
2018-07-03	blockseg	Two Dimensional Change-Points Detection
2018-07-03	DatabionicSwarm	Swarm Intelligence for Self-Organized Clustering
2018-07-03	diffee	Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure
2018-07-03	estudy2	An Implementation of Parametric and Nonparametric Event Study
2018-07-03	GeneralizedUmatrix	Credible Visualization for Two-Dimensional Projections of Data
2018-07-03	ggedit	Interactive 'ggplot2' Layer and Theme Aesthetic Editor
2018-07-03	ggplot2	Create Elegant Data Visualisations Using the Grammar of Graphics
2018-07-03	GLMMadaptive	Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
2018-07-03	glmmTMB	Generalized Linear Mixed Models using Template Model Builder
2018-07-03	horizon	Horizon Search Algorithm
2018-07-03	MCMCglmm	MCMC Generalised Linear Mixed Models
2018-07-03	optiRum	Financial Functions & More
2018-07-03	paleotree	Paleontological and Phylogenetic Analyses of Evolution
2018-07-03	pcadapt	Fast Principal Component Analysis for Outlier Detection
2018-07-03	petrinetR	Building, Visualizing, Exporting and Replaying Petri Nets
2018-07-03	phateR	PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding
2018-07-03	processmapR	Construct Process Maps Using Event Data
2018-07-03	RSA	Response Surface Analysis
2018-07-03	rsyslog	Interface to the 'syslog' System Logger
2018-07-03	scholar	Analyse Citation Data from Google Scholar
2018-07-03	scraEP	Scrape European Parliament Careers
2018-07-03	speaq	Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations
2018-07-03	spup	Spatial Uncertainty Propagation Analysis
2018-07-02	ACA	Abrupt Change-Point or Aberration Detection in Point Series
2018-07-02	adaptalint	Check Code Style Painlessly
2018-07-02	aiRthermo	Atmospheric Thermodynamics and Visualization
2018-07-02	bigdatadist	Distances for Machine Learning and Statistics in the Context of Big Data
2018-07-02	disco	Discordance and Concordance of Transcriptomic Responses
2018-07-02	drtmle	Doubly-Robust Nonparametric Estimation and Inference
2018-07-02	EDA	Energy Decomposition Analysis
2018-07-02	edeaR	Exploratory and Descriptive Event-Based Data Analysis
2018-07-02	evaluator	Quantified Risk Assessment Toolkit
2018-07-02	expp	Spatial Analysis of Extra-Pair Paternity
2018-07-02	GD	Geographical Detectors
2018-07-02	ggraptR	Allows Interactive Visualization of Data Through a Web Browser GUI
2018-07-02	L0Learn	Fast Algorithms for Best Subset Selection
2018-07-02	mlrCPO	Composable Preprocessing Operators and Pipelines for Machine Learning
2018-07-02	neatmaps	Heatmaps for Multiple Network Data
2018-07-02	pccc	Pediatric Complex Chronic Conditions
2018-07-02	RColetum	Access your Coletum's Data from API
2018-07-02	rde	Reproducible Data Embedding
2018-07-02	robis	Ocean Biogeographic Information System (OBIS) Client
2018-07-02	rollRegres	Fast Rolling and Expanding Window Linear Regression
2018-07-02	rWind	Download, Edit and Include Wind Data in Ecological and Evolutionary Analysis
2018-07-02	simdistr	Assessment of Data Trial Distributions According to the Carlisle-Stouffer Method
2018-07-02	SimplifyStats	Simplifies Pairwise Statistical Analyses
2018-07-02	simule	A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models
2018-07-02	sommer	Solving Mixed Model Equations in R
2018-07-02	SpatialExtremes	Modelling Spatial Extremes
2018-07-02	STRMPS	Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data
2018-07-02	tikzDevice	R Graphics Output in LaTeX Format
2018-07-02	TROM	Transcriptome Overlap Measure
2018-07-02	vqtl	Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses
2018-07-01	BlockCov	Estimation of Large Block Covariance Matrices
2018-07-01	blocksdesign	Nested and Crossed Block Designs for Factorial, Fractional Factorial and Unstructured Treatment Sets
2018-07-01	bupaR	Business Process Analysis in R
2018-07-01	CircStats	Circular Statistics, from "Topics in Circular Statistics" (2001)
2018-07-01	container	Deque, Set, and Dict - R6 Based Container Classes with Iterators
2018-07-01	dynamichazard	Dynamic Hazard Models using State Space Models
2018-07-01	eChem	Simulations for Electrochemistry Experiments
2018-07-01	editrules	Parsing, Applying, and Manipulating Data Cleaning Rules
2018-07-01	frite	Functions Writing Functions
2018-07-01	ganalytics	Interact with 'Google Analytics'
2018-07-01	GenomicMating	Efficient Breeding by Genomic Mating
2018-07-01	ggrasp	Gaussian-Based Genome Representative Selector with Prioritization
2018-07-01	healthcareai	Tools for Healthcare Machine Learning
2018-07-01	ImputeRobust	Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape
2018-07-01	knnp	Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel)
2018-07-01	mppR	Multi-Parent Population QTL Analysis
2018-07-01	NBLDA	Negative Binomial Linear Discriminant Analysis
2018-07-01	plde	Penalized Log-Density Estimation Using Legendre Polynomials
2018-07-01	PRISM.forecast	Penalized Regression with Inferred Seasonality Module - Forecasting Unemployment Initial Claims using 'Google Trends' Data
2018-07-01	randomsearch	Random Search for Expensive Functions
2018-07-01	searcher	Query Search Interfaces
2018-07-01	SimCorrMix	Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions
2018-07-01	sitmo	Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
2018-07-01	spemd	A Bi-Dimensional Implementation of the Empirical Mode Decomposition for Spatial Data
2018-07-01	tippy	Add Tooltips to 'R markdown' Documents or 'Shiny' Apps
2018-07-01	tropicalSparse	Sparse Tropical Algebra
2018-06-30	anomaly	Detecting Anomalies in Data
2018-06-30	BANEScarparkinglite	Working with Car Parking Data for Bath and North East Somerset
2018-06-30	biolink	Create Hyperlinks to Biological Databases and Resources
2018-06-30	CARRoT	Predicting Categorical and Continuous Outcomes Using One in Ten Rule
2018-06-30	DataVisualizations	Visualizations of High-Dimensional Data
2018-06-30	expands	Expanding Ploidy and Allele-Frequency on Nested Subpopulations
2018-06-30	glmpathcr	Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response
2018-06-30	GuardianR	The Guardian API Wrapper
2018-06-30	interplot	Plot the Effects of Variables in Interaction Terms
2018-06-30	ISOcodes	Selected ISO Codes
2018-06-30	LaplacesDemon	Complete Environment for Bayesian Inference
2018-06-30	lmm	Linear Mixed Models
2018-06-30	mgcViz	Visualisations for Generalized Additive Models
2018-06-30	OECD	Search and Extract Data from the OECD
2018-06-30	rangeMapper	A Platform for the Study of Macro-Ecology of Life History Traits
2018-06-30	RcppAlgos	Tools for Combinatorics and Computational Mathematics
2018-06-30	scrm	Simulating the Evolution of Biological Sequences
2018-06-30	sealr	Sealing the R Objects Test and Assert Conditions
2018-06-30	shallot	Random Partition Distribution Indexed by Pairwise Information
2018-06-30	svMisc	SciViews - Miscellaneous Functions
2018-06-30	tdthap	TDT Tests for Extended Haplotypes
2018-06-30	TSA	Time Series Analysis
2018-06-30	unfoldr	Stereological Unfolding for Spheroidal Particles
2018-06-30	Unicode	Unicode Data and Utilities
2018-06-29	airGR	Suite of GR Hydrological Models for Precipitation-Runoff Modelling
2018-06-29	audio	Audio Interface for R
2018-06-29	bamboo	Protein Secondary Structure Prediction Using the Bamboo Method
2018-06-29	bayesboot	An Implementation of Rubin's (1981) Bayesian Bootstrap
2018-06-29	Brq	Bayesian Analysis of Quantile Regression Models
2018-06-29	chillR	Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2018-06-29	clustermq	Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)
2018-06-29	crplyr	A 'dplyr' Interface for Crunch
2018-06-29	dplyr	A Grammar of Data Manipulation
2018-06-29	expint	Exponential Integral and Incomplete Gamma Function
2018-06-29	fDMA	Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
2018-06-29	flexdashboard	R Markdown Format for Flexible Dashboards
2018-06-29	geojsonsf	GeoJSON to Simple Feature Converter
2018-06-29	googlesheets	Manage Google Spreadsheets from R
2018-06-29	groupedSurv	Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function
2018-06-29	ifaTools	Toolkit for Item Factor Analysis with 'OpenMx'
2018-06-29	learnr	Interactive Tutorials for R
2018-06-29	mfe	Meta-Feature Extractor
2018-06-29	multicmp	Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
2018-06-29	nlcv	Nested Loop Cross Validation
2018-06-29	pan	Multiple Imputation for Multivariate Panel or Clustered Data
2018-06-29	pool	Object Pooling
2018-06-29	Rttf2pt1	'ttf2pt1' Program
2018-06-29	SCORPIUS	Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
2018-06-29	sdols	Summarizing Distributions of Latent Structures
2018-06-29	spTimer	Spatio-Temporal Bayesian Modelling
2018-06-29	support.BWS2	Basic Functions for Supporting an Implementation of Case 2 Best-Worst Scaling
2018-06-29	svrpath	The SVR Path Algorithm
2018-06-29	taxlist	Handling Taxonomic Lists
2018-06-29	vegtable	Handling Vegetation Data Sets
2018-06-29	zooimage	Analysis of Numerical Plankton Images
2018-06-28	cgam	Constrained Generalized Additive Model
2018-06-28	cld3	Google's Compact Language Detector 3
2018-06-28	dataone	R Interface to the DataONE REST API
2018-06-28	dynOmics	Fast Fourier Transform to Identify Associations Between Time Course Omics Data
2018-06-28	ecotox	Analysis of Ecotoxicology
2018-06-28	gistr	Work with 'GitHub' 'Gists'
2018-06-28	hyperSpec	Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2018-06-28	INDperform	Evaluation of Indicator Performances for Assessing Ecosystem States
2018-06-28	lemon	Freshing Up your 'ggplot2' Plots
2018-06-28	lmQCM	An Algorithm for Gene Co-Expression Analysis
2018-06-28	prioritizr	Systematic Conservation Prioritization in R
2018-06-28	raptr	Representative and Adequate Prioritization Toolkit in R
2018-06-28	ropercenter	Reproducible Data Retrieval from the Roper Center Data Archive
2018-06-28	rsdmx	Tools for Reading SDMX Data and Metadata
2018-06-28	SimMultiCorrData	Simulation of Correlated Data with Multiple Variable Types
2018-06-28	skynet	Generates Networks from BTS Data
2018-06-28	svIDE	Functions to Ease Interactions Between R and IDE or Code Editors
2018-06-28	svTools	Wrappers for Tools in Other Packages for IDE Friendliness
2018-06-28	svWidgets	Management of GUI Widgets, Windows, and Other GUI Resources
2018-06-28	wTO	Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
2018-06-27	abcrf	Approximate Bayesian Computation via Random Forests
2018-06-27	AdaSampling	Adaptive Sampling for Positive Unlabeled and Label Noise Learning
2018-06-27	biomartr	Genomic Data Retrieval
2018-06-27	BTdecayLasso	Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso
2018-06-27	cbinom	Continuous Analog of a Binomial Distribution
2018-06-27	checkr	Check the Properties of Common R Objects
2018-06-27	clogitLasso	Sparse Conditional Logistic Regression for Matched Studies
2018-06-27	colordistance	Distance Metrics for Image Color Similarity
2018-06-27	CytobankAPIstats	Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'
2018-06-27	devtools	Tools to Make Developing R Packages Easier
2018-06-27	dineq	Decomposition of (Income) Inequality
2018-06-27	dng	Distributions and Gradients
2018-06-27	dotwhisker	Dot-and-Whisker Plots of Regression Results
2018-06-27	dsm	Density Surface Modelling of Distance Sampling Data
2018-06-27	DSsim	Distance Sampling Simulations
2018-06-27	ecospat	Spatial Ecology Miscellaneous Methods
2018-06-27	fastR2	Foundations and Applications of Statistics Using R (2nd Edition)
2018-06-27	GBJ	Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
2018-06-27	haven	Import and Export 'SPSS', 'Stata' and 'SAS' Files
2018-06-27	mclust	Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2018-06-27	mmap	Map Pages of Memory
2018-06-27	mrds	Mark-Recapture Distance Sampling
2018-06-27	NITPicker	Finds the Best Subset of Points to Sample
2018-06-27	nsRFA	Non-Supervised Regional Frequency Analysis
2018-06-27	NutrienTrackeR	Food Composition Information and Dietary Assessment
2018-06-27	phyloseqGraphTest	Graph-Based Permutation Tests for Microbiome Data
2018-06-27	pkgbuild	Find Tools Needed to Build R Packages
2018-06-27	preseqR	Predicting Species Accumulation Curves
2018-06-27	readbitmap	Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF)
2018-06-27	rjmcmc	Reversible-Jump MCMC Using Post-Processing
2018-06-27	RKEELjars	Java Executable .jar Files for 'RKEEL'
2018-06-27	semTools	Useful Tools for Structural Equation Modeling
2018-06-27	SWMPrExtension	Additional Functions for Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2018-06-27	TUWmodel	Lumped Hydrological Model for Education Purposes
2018-06-27	VGAMextra	Additions and Extensions of the 'VGAM' Package
2018-06-26	backpipe	Backward Pipe (Right-to-Left) Operator
2018-06-26	ClusterBootstrap	Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
2018-06-26	elastic	General Purpose Interface to 'Elasticsearch'
2018-06-26	epanetReader	Read Epanet Files into R
2018-06-26	ERP	Significance Analysis of Event-Related Potentials Data
2018-06-26	fancycut	A Fancy Version of 'base::cut'
2018-06-26	fetchR	Calculate Wind Fetch
2018-06-26	gtools	Various R Programming Tools
2018-06-26	icesAdvice	Functions Related to ICES Advice
2018-06-26	jpmesh	Utilities for Japanese Mesh Code
2018-06-26	MDFS	MultiDimensional Feature Selection
2018-06-26	multiROC	Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications
2018-06-26	NMOF	Numerical Methods and Optimization in Finance
2018-06-26	nycflights13	Flights that Departed NYC in 2013
2018-06-26	otvPlots	Over Time Variable Plots
2018-06-26	padr	Quickly Get Datetime Data Ready for Analysis
2018-06-26	protolite	Fast and Simple Object Serialization to Protocol Buffers
2018-06-26	qrnn	Quantile Regression Neural Network
2018-06-26	quickPlot	A System of Plotting Optimized for Speed and Modularity
2018-06-26	rcarbon	Calibration and Analysis of Radiocarbon Dates
2018-06-26	RcmdrPlugin.lfstat	'Rcmdr' Plug-in for Low Flow Analysis
2018-06-26	sbpiper	Data Analysis Functions for 'SBpipe' Package
2018-06-26	schoenberg	Tools for 12-Tone Musical Composition
2018-06-26	seacarb	Seawater Carbonate Chemistry
2018-06-26	seminr	Domain-Specific Language for Building PLS Structural Equation Models
2018-06-26	styler	Non-Invasive Pretty Printing of R Code
2018-06-26	tableMatrix	Combines 'data.table' and 'matrix' Classes
2018-06-26	trackdem	Particle Tracking and Demography
2018-06-26	treeDA	Tree-Based Discriminant Analysis
2018-06-26	TropFishR	Tropical Fisheries Analysis
2018-06-26	unpivotr	Unpivot Complex and Irregular Data Layouts
2018-06-26	voxel	Mass-Univariate Voxelwise Analysis of Medical Imaging Data
2018-06-25	apaTables	Create American Psychological Association (APA) Style Tables
2018-06-25	autoshiny	Automatic Transformation of an 'R' Function into a 'shiny' App
2018-06-25	bibliometrix	An R-Tool for Comprehensive Science Mapping Analysis
2018-06-25	bizdays	Business Days Calculations and Utilities
2018-06-25	BoSSA	A Bunch of Structure and Sequence Analysis
2018-06-25	cartography	Thematic Cartography
2018-06-25	catcont	Test, Identify, Select and Mutate Categorical or Continuous Values
2018-06-25	cellWise	Analyzing Data with Cellwise Outliers
2018-06-25	ConvergenceClubs	Finding Convergence Clubs
2018-06-25	ctsem	Continuous Time Structural Equation Modelling
2018-06-25	gmodels	Various R Programming Tools for Model Fitting
2018-06-25	helixvis	Visualize Alpha-Helical Peptide Sequences
2018-06-25	histry	Enhanced Command History Tracking for R Sessions and Dynamic Documents
2018-06-25	meanShiftR	A Computationally Efficient Mean Shift Implementation
2018-06-25	missMDA	Handling Missing Values with Multivariate Data Analysis
2018-06-25	mlf	Machine Learning Foundations
2018-06-25	multinet	Analysis and Mining of Multilayer Social Networks
2018-06-25	na.tools	Comprehensive Library for Working with Missing (NA) Values in Vectors
2018-06-25	ParamHelpers	Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2018-06-25	phylogram	Dendrograms for Evolutionary Analysis
2018-06-25	platetools	Tools and Plots for Multi-Well Plates
2018-06-25	readroper	Simply Read ASCII Single and Multicard Polling Datasets
2018-06-25	RobustAFT	Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case
2018-06-25	rrepast	Invoke 'Repast Simphony' Simulation Models
2018-06-25	tsBSS	Blind Source Separation and Supervised Dimension Reduction for Time Series
2018-06-25	WeightIt	Weighting for Covariate Balance in Observational Studies
2018-06-24	afex	Analysis of Factorial Experiments
2018-06-24	cofeatureR	Generate Cofeature Matrices
2018-06-24	coreCT	Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging
2018-06-24	DDPGPSurv	DDP-GP Survival Analysis
2018-06-24	EcoGenetics	Management and Exploratory Analysis of Spatial Data in Landscape Genetics
2018-06-24	glmmfields	Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling
2018-06-24	GSAfisherCombined	Gene Set Analysis with Fisher Combined Method
2018-06-24	ICEinfer	Incremental Cost-Effectiveness Inference using Two Unbiased Samples
2018-06-24	lutz	Look Up Time Zones of Point Coordinates
2018-06-24	mosaicCore	Common Utilities for Other MOSAIC-Family Packages
2018-06-24	MuChPoint	Multiple Change Point
2018-06-24	nat.templatebrains	NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains
2018-06-24	patternplot	Versatile Pie Charts, Bar Charts and Box Plots using Patterns, Colors and Images
2018-06-24	RGreenplum	Interface to 'Greenplum' Database
2018-06-24	RIA	Radiomics Image Analysis Toolbox for Medial Images
2018-06-24	SpatioTemporal	Spatio-Temporal Model Estimation
2018-06-24	splot	Split Plot
2018-06-24	subrank	Computes Copula using Ranks and Subsampling
2018-06-24	vsgoftest	Goodness-of-Fit Tests Based on Kullback-Leibler Divergence
2018-06-23	clipr	Read and Write from the System Clipboard
2018-06-23	ddalpha	Depth-Based Classification and Calculation of Data Depth
2018-06-23	ggdistribute	A 'ggplot2' Extension for Plotting Unimodal Distributions
2018-06-23	ggpubr	'ggplot2' Based Publication Ready Plots
2018-06-23	GMDH2	Binary Classification via GMDH-Type Neural Network Algorithms
2018-06-23	mosaicData	Project MOSAIC Data Sets
2018-06-23	MPTinR	Analyze Multinomial Processing Tree Models
2018-06-23	plotROC	Generate Useful ROC Curve Charts for Print and Interactive Use
2018-06-23	rtdists	Response Time Distributions
2018-06-23	RZooRoH	Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes
2018-06-23	schumaker	Schumaker Shape-Preserving Spline
2018-06-23	TMB	Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
2018-06-23	trtf	Transformation Trees and Forests
2018-06-23	zeitgebr	Analysis of Circadian Behaviours
2018-06-22	acebayes	Optimal Bayesian Experimental Design using the ACE Algorithm
2018-06-22	alr3	Data to Accompany Applied Linear Regression 3rd Edition
2018-06-22	BayLum	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
2018-06-22	BHTSpack	Bayesian Multi-Plate High-Throughput Screening of Compounds
2018-06-22	bisoreg	Bayesian Isotonic Regression with Bernstein Polynomials
2018-06-22	configr	An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
2018-06-22	CopulaREMADA	Copula Mixed Effect Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies
2018-06-22	crunch	Crunch.io Data Tools
2018-06-22	Delaporte	Statistical Functions for the Delaporte Distribution
2018-06-22	doRNG	Generic Reproducible Parallel Backend for 'foreach' Loops
2018-06-22	hexSticker	Create Hexagon Sticker in R
2018-06-22	KnowBR	Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases
2018-06-22	lcmm	Extended Mixed Models Using Latent Classes and Latent Processes
2018-06-22	mcmcplots	Create Plots from MCMC Output
2018-06-22	mlt	Most Likely Transformations
2018-06-22	mombf	Moment and Inverse Moment Bayes Factors
2018-06-22	mosum	Moving Sum Based Procedures for Changes in the Mean
2018-06-22	protViz	Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2018-06-22	RcmdrPlugin.temis	Graphical Integrated Text Mining Solution
2018-06-22	reprex	Prepare Reproducible Example Code via the Clipboard
2018-06-22	robcbi	Conditionally Unbiased Bounded Influence Estimates
2018-06-22	RStoolbox	Tools for Remote Sensing Data Analysis
2018-06-22	s20x	Functions for University of Auckland Course STATS 201/208 Data Analysis
2018-06-22	statnet.common	Common R Scripts and Utilities Used by the Statnet Project Software
2018-06-22	subscreen	Systematic Screening of Study Data for Subgroup Effects
2018-06-22	tram	Transformation Models
2018-06-22	wallace	A Modular Platform for Reproducible Modeling of Species Niches and Distributions
2018-06-21	BDgraph	Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
2018-06-21	BUCSS	Bias and Uncertainty Corrected Sample Size
2018-06-21	cartogram	Create Cartograms with R
2018-06-21	clickR	Fix Data and Create Report Tables from Different Objects
2018-06-21	docopulae	Optimal Designs for Copula Models
2018-06-21	fastDummies	Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
2018-06-21	forecast	Forecasting Functions for Time Series and Linear Models
2018-06-21	gnm	Generalized Nonlinear Models
2018-06-21	googleAuthR	Authenticate and Create Google APIs
2018-06-21	googleLanguageR	Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API
2018-06-21	graphframes	Interface for 'GraphFrames'
2018-06-21	iilasso	Independently Interpretable Lasso
2018-06-21	LEGIT	Latent Environmental & Genetic InTeraction (LEGIT) Model
2018-06-21	mlrMBO	Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions
2018-06-21	nlmixr	Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics
2018-06-21	qrng	(Randomized) Quasi-Random Number Generators
2018-06-21	rAmCharts	JavaScript Charts Tool
2018-06-21	Rmixmod	Classification with Mixture Modelling
2018-06-21	rnn	Recurrent Neural Network
2018-06-21	shinyhelper	Easily Add Markdown Help Files to 'shiny' App Elements
2018-06-21	sigmoid	Sigmoid Functions for Machine Learning
2018-06-21	SimilaR	R Source Code Similarity Evaluation
2018-06-21	staRdom	PARAFAC Analysis of EEMs from DOM
2018-06-21	thinkr	Tools for Cleaning Up Messy Files
2018-06-21	tidyxl	Read Untidy Excel Files
2018-06-21	TSPred	Functions for Benchmarking Time Series Prediction
2018-06-21	warbleR	Streamline Bioacoustic Analysis
2018-06-20	anipaths	Animation of Observed Trajectories Using Spline-Based Interpolation
2018-06-20	bfw	Bayesian Framework for Computational Modeling
2018-06-20	emojifont	Emoji and Font Awesome in Graphics
2018-06-20	fluxweb	Estimate Energy Fluxes in Food Webs
2018-06-20	Gmisc	Descriptive Statistics, Transition Plots, and More
2018-06-20	hsdar	Manage, Analyse and Simulate Hyperspectral Data
2018-06-20	imputeTS	Time Series Missing Value Imputation
2018-06-20	modifiedmk	Modified Mann Kendall Trend Tests
2018-06-20	momentuHMM	Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models
2018-06-20	mortAAR	Analysis of Archaeological Mortality Data
2018-06-20	randomizeBE	Create a Random List for Crossover Studies
2018-06-20	rEDM	Applications of Empirical Dynamic Modeling from Time Series
2018-06-20	rsimsum	Analysis of Simulation Studies Including Monte Carlo Error
2018-06-20	rtweet	Collecting Twitter Data
2018-06-20	SDLfilter	Filtering Satellite-Derived Locations
2018-06-20	smicd	Statistical Methods for Interval Censored Data
2018-06-20	VarSelLCM	Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values
2018-06-20	vertexenum	Vertex Enumeration of Polytopes
2018-06-20	visualFields	Statistical Methods for Visual Fields
2018-06-20	womblR	Spatiotemporal Boundary Detection Model for Areal Unit Data
2018-06-19	adwordsR	Access the 'Google Adwords' API
2018-06-19	arfima	Fractional ARIMA (and Other Long Memory) Time Series Modeling
2018-06-19	BETS	Brazilian Economic Time Series
2018-06-19	brranching	Fetch 'Phylogenies' from Many Sources
2018-06-19	careless	Procedures for Computing Indices of Careless Responding
2018-06-19	centralplot	Show the Strength of Relationships Between Centre and Peripheral Items
2018-06-19	chinese.misc	Miscellaneous Tools for Chinese Text Mining and More
2018-06-19	convey	Income Concentration Analysis with Complex Survey Samples
2018-06-19	cstab	Selection of Number of Clusters via Normalized Clustering Instability
2018-06-19	deming	Deming, Thiel-Sen and Passing-Bablock Regression
2018-06-19	derivmkts	Functions and R Code to Accompany Derivatives Markets
2018-06-19	DPtree	Dirichlet-Based Polya Tree
2018-06-19	EmissV	Vehicular Emissions by Top-Down Methods
2018-06-19	ggimage	Use Image in 'ggplot2'
2018-06-19	groupICA	Independent Component Analysis for Grouped Data
2018-06-19	GWSDAT	GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
2018-06-19	httptest	A Test Environment for HTTP Requests
2018-06-19	kidney.epi	Kidney Functions: Clinical and Epidemiological
2018-06-19	M2SMF	Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis
2018-06-19	Mcomp	Data from the M-Competitions
2018-06-19	otuSummary	Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres
2018-06-19	prodest	Production Function Estimation
2018-06-19	PRROC	Precision-Recall and ROC Curves for Weighted and Unweighted Data
2018-06-19	rdiversity	Measurement and Partitioning of Similarity-Sensitive Biodiversity
2018-06-19	recommenderlab	Lab for Developing and Testing Recommender Algorithms
2018-06-19	RepoGenerator	Generates a Project and Repo for Easy Initialization of a Workshop
2018-06-19	RItools	Randomization Inference Tools
2018-06-19	ROI.plugin.neos	'NEOS' Plug-in for the 'R' Optimization Interface
2018-06-19	RxODE	Facilities for Simulating from ODE-Based Models
2018-06-19	sitar	Super Imposition by Translation and Rotation Growth Curve Analysis
2018-06-19	smapr	Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data
2018-06-19	spam	SPArse Matrix
2018-06-19	spam64	64-Bit Extension of the SPArse Matrix R Package 'spam'
2018-06-19	steemr	A Tool for Processing Steem Data
2018-06-19	umx	Structural Equation and Twin Modeling in R
2018-06-19	uptasticsearch	Get Data Frame Representations of 'Elasticsearch' Results
2018-06-18	ahnr	An Implementation of the Artificial Hydrocarbon Networks
2018-06-18	asciiSetupReader	Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and Setup Files (.sps or .sas)
2018-06-18	bayeslm	Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors
2018-06-18	causalsens	Selection Bias Approach to Sensitivity Analysis for Causal Effects
2018-06-18	choiceDes	Design Functions for Choice Studies
2018-06-18	CircularDDM	Circular Drift-Diffusion Model
2018-06-18	designmatch	Matched Samples that are Balanced and Representative by Design
2018-06-18	dragonking	Statistical Tools to Identify Dragon Kings
2018-06-18	gamclass	Functions and Data for a Course on Modern Regression and Classification
2018-06-18	geeM	Solve Generalized Estimating Equations
2018-06-18	geoops	'GeoJSON' Topology Calculations and Operations
2018-06-18	grImport	Importing Vector Graphics
2018-06-18	growthrates	Estimate Growth Rates from Experimental Data
2018-06-18	IAPWS95	Thermophysical Properties of Water and Steam
2018-06-18	kofdata	Get Data from the 'KOF Datenservice' API
2018-06-18	mdsr	Complement to 'Modern Data Science with R'
2018-06-18	Mega2R	Accessing and Processing a 'Mega2' Genetic Database
2018-06-18	MetaComp	EDGE Taxonomy Assignments Visualization
2018-06-18	mgcv	Mixed GAM Computation Vehicle with Automatic Smoothness Estimation
2018-06-18	mixdir	Cluster High Dimensional Categorical Datasets
2018-06-18	NNLM	Fast and Versatile Non-Negative Matrix Factorization
2018-06-18	rdryad	Access for Dryad Web Services
2018-06-18	rENA	Epistemic Network Analysis
2018-06-18	rlfsm	Simulations and Statistical Inference for Linear Fractional Stable Motions
2018-06-18	RLumShiny	'Shiny' Applications for the R Package 'Luminescence'
2018-06-18	tsbox	Class-Agnostic Time Series
2018-06-18	VineCopula	Statistical Inference of Vine Copulas
2018-06-17	Ball	Statistical Inference and Sure Independence Screening via Ball Statistics
2018-06-17	belg	Boltzmann Entropy of a Landscape Gradient
2018-06-17	CBPS	Covariate Balancing Propensity Score
2018-06-17	dplyr.teradata	A 'Teradata' Backend for 'dplyr'
2018-06-17	dragulaR	Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library'
2018-06-17	egg	Extensions for 'ggplot2': Custom Geom, Plot Alignment, Symmetrised Scale, and Fixed Panel Size
2018-06-17	exuber	Econometric Analysis of Explosive Time Series
2018-06-17	fuser	Fused Lasso for High-Dimensional Regression over Groups
2018-06-17	h2o	R Interface for 'H2O'
2018-06-17	iplots	iPlots - interactive graphics for R
2018-06-17	jrvFinance	Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
2018-06-17	MetaLandSim	Landscape and Range Expansion Simulation
2018-06-17	optparse	Command Line Option Parser
2018-06-17	PSPManalysis	Analysis of Physiologically Structured Population Models
2018-06-17	refinr	Cluster and Merge Similar Values Within a Character Vector
2018-06-17	rgdax	Wrapper for 'GDAX' Cryptocurrency Exchange
2018-06-17	spatialwarnings	Spatial Early Warning Signals of Ecosystem Degradation
2018-06-17	statprograms	Graduate Statistics Program Datasets
2018-06-17	walrus	Robust Statistical Methods
2018-06-16	data.tree	General Purpose Hierarchical Data Structure
2018-06-16	FunChisq	Chi-Square and Exact Tests for Model-Free Functional Dependency
2018-06-16	getCRUCLdata	Use and Explore CRU CL v. 2.0 Climatology Elements in R
2018-06-16	gggenes	Draw Gene Arrow Maps in 'ggplot2'
2018-06-16	graphicalVAR	Graphical VAR for Experience Sampling Data
2018-06-16	isni	Index of Local Sensitivity to Nonignorability
2018-06-16	QTL.gCIMapping	QTL Genome-Wide Composite Interval Mapping
2018-06-16	recipes	Preprocessing Tools to Create Design Matrices
2018-06-16	sads	Maximum Likelihood Models for Species Abundance Distributions
2018-06-16	supernova	Judd & McClelland Formatting for ANOVA Output
2018-06-15	AdhereR	Adherence to Medications
2018-06-15	alphastable	Inference for Stable Distribution
2018-06-15	Bchron	Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2018-06-15	bsamGP	Bayesian Spectral Analysis Models using Gaussian Process Priors
2018-06-15	CSESA	CRISPR-Based Salmonella Enterica Serotype Analyzer
2018-06-15	Cyclops	Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
2018-06-15	distfree.cr	Distribution-Free Confidence Region
2018-06-15	drugCombo	Drug Interaction Modeling Based on Loewe Additivity Following Harbron's Approach
2018-06-15	gamboostLSS	Boosting Methods for 'GAMLSS'
2018-06-15	glinternet	Learning Interactions via Hierarchical Group-Lasso Regularization
2018-06-15	grpreg	Regularization Paths for Regression Models with Grouped Covariates
2018-06-15	hddplot	Use Known Groups in High-Dimensional Data to Derive Scores for Plots
2018-06-15	hybridModels	Stochastic Hybrid Models in Dynamic Networks
2018-06-15	IntervalSurgeon	Operating on Integer-Bounded Intervals
2018-06-15	kvh	Read/Write Files in Key-Value-Hierarchy Format
2018-06-15	loder	Dependency-Free Access to PNG Image Files
2018-06-15	mcen	Multivariate Cluster Elastic Net
2018-06-15	mmtfa	Model-Based Clustering and Classification with Mixtures of Modified t Factor Analyzers
2018-06-15	model4you	Stratified and Personalised Models Based on Model-Based Trees and Forests
2018-06-15	multicastR	A Companion to the Multi-CAST Collection
2018-06-15	MultisiteMediation	Causal Mediation Analysis in Multisite Trials
2018-06-15	MVar	Multivariate Analysis
2018-06-15	opensensmapr	Client for the Data API of openSenseMap.org
2018-06-15	Orcs	Omnidirectional R Code Snippets
2018-06-15	PPQplan	Process Performance Qualification (PPQ) Plans in Chemistry, Manufacturing and Controls (CMC) Statistical Analysis
2018-06-15	PReMiuM	Dirichlet Process Bayesian Clustering, Profile Regression
2018-06-15	prophet	Automatic Forecasting Procedure
2018-06-15	QGglmm	Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
2018-06-15	QTL.gCIMapping.GUI	QTL Genome-Wide Composite Interval Mapping with Graphical User Interface
2018-06-15	radiant	Business Analytics using R and Shiny
2018-06-15	radiant.model	Model Menu for Radiant: Business Analytics using R and Shiny
2018-06-15	radiant.multivariate	Multivariate Menu for Radiant: Business Analytics using R and Shiny
2018-06-15	randomizeR	Randomization for Clinical Trials
2018-06-15	RcppEigenAD	Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce First and Second Order Partial Derivatives
2018-06-15	rgeopat2	Additional Functions for 'geoPAT' 2
2018-06-15	segregation	Entropy-Based Segregation Indices
2018-06-15	simIReff	Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores
2018-06-15	SLIDE	Single Cell Linkage by Distance Estimation is SLIDE
2018-06-15	SpaDES	Develop and Run Spatially Explicit Discrete Event Simulation Models
2018-06-15	sssc	Same Species Sample Contamination Detection
2018-06-15	txtq	A Small Message Queue for Parallel Processes
2018-06-15	vip	Variable Importance Plots
2018-06-15	wevid	Quantifying Performance of a Binary Classifier Through Weight of Evidence
2018-06-15	WRS2	A Collection of Robust Statistical Methods
2018-06-14	breakDown	Model Agnostic Explainers for Individual Predictions
2018-06-14	CGPfunctions	Powell Miscellaneous Functions for Teaching and Learning Statistics
2018-06-14	compositions	Compositional Data Analysis
2018-06-14	corTest	Robust Tests for Equal Correlation
2018-06-14	DiPhiSeq	Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data
2018-06-14	eseis	Environmental Seismology Toolbox
2018-06-14	expss	Tables with Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
2018-06-14	genesysr	Genesys PGR Client
2018-06-14	GFORCE	Clustering and Inference Procedures for High-Dimensional Latent Variable Models
2018-06-14	ggfan	Summarise a Distribution Through Coloured Intervals
2018-06-14	IPCAPS	Iterative Pruning to Capture Population Structure
2018-06-14	jaccard	Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients
2018-06-14	jpndistrict	Create Japanese Administration Area and Office Maps
2018-06-14	liger	Lightweight Iterative Geneset Enrichment
2018-06-14	lingtypology	Linguistic Typology and Mapping
2018-06-14	LogicReg	Logic Regression
2018-06-14	logspline	Routines for Logspline Density Estimation
2018-06-14	lue	Light Use Efficiency Model to Estimate Biomass and YIELD with and Without Vapour Pressure Deficit
2018-06-14	mase	Model-Assisted Survey Estimators
2018-06-14	mixor	Mixed-Effects Ordinal Regression Analysis
2018-06-14	MODISTools	Interface to the 'MODIS Land Products Subsets' Web Services
2018-06-14	morpheus	Estimate Parameters of Mixtures of Logistic Regressions
2018-06-14	MVN	Multivariate Normality Tests
2018-06-14	nparMD	Nonparametric Analysis of Multivariate Data in Factorial Designs
2018-06-14	polspline	Polynomial Spline Routines
2018-06-14	progress	Terminal Progress Bars
2018-06-14	qpcR	Modelling and Analysis of Real-Time PCR Data
2018-06-14	radiant.basics	Basics Menu for Radiant: Business Analytics using R and Shiny
2018-06-14	radiant.design	Design Menu for Radiant: Business Analytics using R and Shiny
2018-06-14	rgam	Robust Generalized Additive Model
2018-06-14	smacof	Multidimensional Scaling
2018-06-14	splines2	Regression Spline Functions and Classes
2018-06-14	stockR	Identifying Stocks in Genetic Data
2018-06-14	testit	A Simple Package for Testing R Packages
2018-06-14	TPD	Methods for Measuring Functional Diversity Based on Trait Probability Density
2018-06-14	tree.bins	Recategorization of Factor Variables by Decision Tree Leaves
2018-06-14	TrendInTrend	Odds Ratio Estimation and Power Calculation for the Trend in Trend Model
2018-06-14	tuckerR.mmgg	Three-Mode Principal Components Analysis
2018-06-14	varjmcm	Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models
2018-06-14	visNetwork	Network Visualization using 'vis.js' Library
2018-06-14	wnl	Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis
2018-06-13	beanz	Bayesian Analysis of Heterogeneous Treatment Effect
2018-06-13	BIGL	Biochemically Intuitive Generalized Loewe Model
2018-06-13	bshazard	Nonparametric Smoothing of the Hazard Function
2018-06-13	cna	Causal Modeling with Coincidence Analysis
2018-06-13	CsChange	Testing for Change in C-Statistic
2018-06-13	cubature	Adaptive Multivariate Integration over Hypercubes
2018-06-13	dlm	Bayesian and Likelihood Analysis of Dynamic Linear Models
2018-06-13	driftR	Drift Correcting Water Quality Data
2018-06-13	IATanalytics	Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data
2018-06-13	iTOP	Inferring the Topology of Omics Data
2018-06-13	multimode	Mode Testing and Exploring
2018-06-13	MVar.pt	Analise multivariada (brazilian portuguese)
2018-06-13	PAS	Polygenic Analysis System (PAS)
2018-06-13	PCRedux	Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Helper Tool
2018-06-13	PKNCA	Perform Pharmacokinetic Non-Compartmental Analysis
2018-06-13	PracTools	Tools for Designing and Weighting Survey Samples
2018-06-13	RcmdrPlugin.UCA	UCA Rcmdr Plug-in
2018-06-13	ROpenDota	Access OpenDota Services in R
2018-06-13	sae	Small Area Estimation
2018-06-13	sensitivitymv	Sensitivity Analysis in Observational Studies
2018-06-13	ShortForm	Automatic Short Form Creation
2018-06-13	spsurvey	Spatial Survey Design and Analysis
2018-06-13	tidytree	A Tidy Tool for Phylogenetic Tree Data Manipulation
2018-06-12	antaresViz	Antares Visualizations
2018-06-12	aplpack	Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others
2018-06-12	beginr	Functions for R Beginners
2018-06-12	cairoDevice	Embeddable Cairo Graphics Device Driver
2018-06-12	CaseBasedReasoning	Case-Based Reasoning
2018-06-12	CGP	Composite Gaussian Process Models
2018-06-12	codyn	Community Dynamics Metrics
2018-06-12	erhcv	Equi-Rank Hierarchical Clustering Validation
2018-06-12	fpCompare	Reliable Comparison of Floating Point Numbers
2018-06-12	freetypeharfbuzz	Deterministic Computation of Text Box Metrics
2018-06-12	ggseas	'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
2018-06-12	hett	Heteroscedastic t-Regression
2018-06-12	hydroPSO	Particle Swarm Optimisation, with Focus on Environmental Models
2018-06-12	IDSpatialStats	Estimate Global Clustering in Infectious Disease
2018-06-12	iRepro	Reproducibility for Interval-Censored Data
2018-06-12	lestat	A Package for Learning Statistics
2018-06-12	linpk	Generate Concentration-Time Profiles from Linear PK Systems
2018-06-12	lpridge	Local Polynomial (Ridge) Regression
2018-06-12	MLZ	Mean Length-Based Estimators of Mortality using TMB
2018-06-12	morse	Modelling Tools for Reproduction and Survival Data in Ecotoxicology
2018-06-12	munsell	Utilities for Using Munsell Colours
2018-06-12	mvord	Multivariate Ordinal Regression Models
2018-06-12	NetRep	Permutation Testing Network Module Preservation Across Datasets
2018-06-12	netSEM	Network Structural Equation Modeling
2018-06-12	norris	All of Your Chuck Norris Needs
2018-06-12	pulsar	Parallel Utilities for Lambda Selection along a Regularization Path
2018-06-12	pxweb	R Interface to the PX-Web/PC-Axis API
2018-06-12	quickpsy	Fits Psychometric Functions for Multiple Groups
2018-06-12	radiant.data	Data Menu for Radiant: Business Analytics using R and Shiny
2018-06-12	RcppThread	R-Friendly Threading in C++
2018-06-12	RGtk2	R Bindings for Gtk 2.8.0 and Above
2018-06-12	rstiefel	Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold
2018-06-12	scorecard	Credit Risk Scorecard
2018-06-12	sensiPhy	Sensitivity Analysis for Comparative Methods
2018-06-12	spectralAnalysis	Pre-Process, Visualize and Analyse Process Analytical Data, by Spectral Data Measurements Made During a Chemical Process
2018-06-12	tightClust	Tight Clustering
2018-06-12	tuts	Time Uncertain Time Series Analysis
2018-06-12	wdm	Weighted Dependence Measures
2018-06-11	bpca	Biplot of Multivariate Data Based on Principal Components Analysis
2018-06-11	CALIBERrfimpute	Multiple Imputation Using MICE and Random Forest
2018-06-11	ClueR	Cluster Evaluation
2018-06-11	dae	Functions Useful in the Design and ANOVA of Experiments
2018-06-11	Deriv	Symbolic Differentiation
2018-06-11	diceR	Diverse Cluster Ensemble in R
2018-06-11	extRemes	Extreme Value Analysis
2018-06-11	gamlss.cens	Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions
2018-06-11	imageData	Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer
2018-06-11	jwutil	Tools for Data Manipulation and Testing
2018-06-11	leaflet.minicharts	Mini Charts for Interactive Maps
2018-06-11	manipulateWidget	Add Even More Interactivity to Interactive Charts
2018-06-11	ompr	Model and Solve Mixed Integer Linear Programs
2018-06-11	ompr.roi	A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI')
2018-06-11	PlasmaMutationDetector	Tumor Mutation Detection in Plasma
2018-06-11	plsRglm	Partial Least Squares Regression for Generalized Linear Models
2018-06-11	politeness	Detecting Politeness Features in Text
2018-06-11	PPforest	Projection Pursuit Classification Forest
2018-06-11	RAdwords	Loading Google Adwords Data into R
2018-06-11	rclimateca	Fetch Climate Data from Environment Canada
2018-06-11	RInno	An Installation Framework for Shiny Apps
2018-06-11	rmarkdown	Dynamic Documents for R
2018-06-11	spatstat.data	Datasets for 'spatstat'
2018-06-11	xlsx	Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
2018-06-10	antitrust	Tools for Antitrust Practitioners
2018-06-10	AROC	Covariate-Adjusted Receiver Operating Characteristic Curve Inference
2018-06-10	blavaan	Bayesian Latent Variable Analysis
2018-06-10	cheddar	Analysis and Visualisation of Ecological Communities
2018-06-10	circlize	Circular Visualization
2018-06-10	CMLS	Constrained Multivariate Least Squares
2018-06-10	cplm	Compound Poisson Linear Models
2018-06-10	DHS.rates	Calculate Key DHS Indicators
2018-06-10	eNetXplorer	Quantitative Exploration of Elastic Net Families for Generalized Linear Models
2018-06-10	FILEST	Fine-Level Structure Simulator
2018-06-10	freeknotsplines	Algorithms for Implementing Free-Knot Splines
2018-06-10	GetoptLong	Parsing Command-Line Arguments and Variable Interpolation
2018-06-10	humidity	Calculate Water Vapor Measures from Temperature and Dew Point
2018-06-10	inplace	In-place Operators for R
2018-06-10	mdsstat	Statistical Trending for Medical Devices Surveillance
2018-06-10	multiway	Component Models for Multi-Way Data
2018-06-10	mvMISE	A General Framework of Multivariate Mixed-Effects Selection Models
2018-06-10	ratematrix	Bayesian Estimation of the Evolutionary Rate Matrix
2018-06-10	RcppGSL	'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2018-06-10	RcppZiggurat	'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2018-06-10	rvg	R Graphics Devices for Vector Graphics Output
2018-06-10	StatCharrms	Statistical Analysis of Chemistry, Histopathology, and Reproduction Endpoints Including Repeated Measures and Multi-Generation Studies
2018-06-10	teachingApps	Apps for Teaching Statistics, R Programming, and Shiny App Development
2018-06-10	trade	Tools for Trade Practitioners
2018-06-09	biclust	BiCluster Algorithms
2018-06-09	GlobalOptions	Generate Functions to Get or Set Global Options
2018-06-09	HDInterval	Highest (Posterior) Density Intervals
2018-06-09	highr	Syntax Highlighting for R Source Code
2018-06-09	Libra	Linearized Bregman Algorithms for Generalized Linear Models
2018-06-09	odbc	Connect to ODBC Compatible Databases (using the DBI Interface)
2018-06-09	railtrails	Data for Trails in the United States from the Rails-to-Trails Conservancy
2018-06-09	RcppDE	Global Optimization by Differential Evolution in C++
2018-06-09	Surrogate	Evaluation of Surrogate Endpoints in Clinical Trials
2018-06-09	tiler	Create Geographic and Non-Geographic Map Tiles
2018-06-09	units	Measurement Units for R Vectors
2018-06-09	useful	A Collection of Handy, Useful Functions
2018-06-09	xgboost	Extreme Gradient Boosting
2018-06-08	bigQueryR	Interface with Google BigQuery with Shiny Compatibility
2018-06-08	bivrp	Bivariate Residual Plots with Simulation Polygons
2018-06-08	blackbox	Black Box Optimization and Exploration of Parameter Space
2018-06-08	boxplotdbl	Double Box Plot for Two-Axes Correlation
2018-06-08	CompRandFld	Composite-Likelihood Based Analysis of Random Fields
2018-06-08	diaplt	Beads Summary Plot of Ranges
2018-06-08	dqrng	Fast Pseudo Random Number Generators
2018-06-08	elliplot	Ellipse Summary Plot of Quantiles
2018-06-08	equateIRT	IRT Equating Methods
2018-06-08	fitDRC	Fitting Density Ratio Classes
2018-06-08	gamlss	Generalised Additive Models for Location Scale and Shape
2018-06-08	gap	Genetic Analysis Package
2018-06-08	IBCF.MTME	Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data
2018-06-08	later	Utilities for Delaying Function Execution
2018-06-08	LSAmitR	Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R'
2018-06-08	Luminescence	Comprehensive Luminescence Dating Data Analysis
2018-06-08	MOCCA	Multi-Objective Optimization for Collecting Cluster Alternatives
2018-06-08	MultNonParam	Multivariate Nonparametric Methods
2018-06-08	naniar	Data Structures, Summaries, and Visualisations for Missing Data
2018-06-08	Peptides	Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences
2018-06-08	rgeos	Interface to Geometry Engine - Open Source ('GEOS')
2018-06-08	RgoogleMaps	Overlays on Static Maps
2018-06-08	rjson	JSON for R
2018-06-08	STARTS	Functions for the STARTS Model
2018-06-08	stringdist	Approximate String Matching and String Distance Functions
2018-06-08	TcGSA	Time-Course Gene Set Analysis
2018-06-08	TunePareto	Multi-Objective Parameter Tuning for Classifiers
2018-06-08	understandBPMN	Calculator of Understandability Metrics for BPMN
2018-06-08	valr	Genome Interval Arithmetic in R
2018-06-08	wavemulcor	Wavelet Routines for Global and Local Multiple Correlation
2018-06-07	AdvDif4	Solving 1D Advection Bi-Flux Diffusion Equation
2018-06-07	BAS	Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
2018-06-07	bayesImageS	Bayesian Methods for Image Segmentation using a Potts Model
2018-06-07	bayou	Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
2018-06-07	BoolNet	Construction, Simulation and Analysis of Boolean Networks
2018-06-07	briskaR	Biological Risk Assessment
2018-06-07	ConR	Computation of Parameters Used in Preliminary Assessment of Conservation Status
2018-06-07	detzrcr	Compare Detrital Zircon Suites
2018-06-07	fastcluster	Fast Hierarchical Clustering Routines for R and 'Python'
2018-06-07	fst	Lightning Fast Serialization of Data Frames for R
2018-06-07	fuzzyreg	Fuzzy Linear Regression
2018-06-07	GDINA	The Generalized DINA Model Framework
2018-06-07	gnFit	Goodness of Fit Test for Continuous Distribution Functions
2018-06-07	LAM	Some Latent Variable Models
2018-06-07	LPmerge	Merging Linkage Maps by Linear Programming
2018-06-07	meta	General Package for Meta-Analysis
2018-06-07	mixR	Finite Mixture Modeling for Raw and Binned Data
2018-06-07	moveHMM	Animal Movement Modelling using Hidden Markov Models
2018-06-07	MPV	Data Sets from Montgomery, Peck and Vining
2018-06-07	netdiffuseR	Analysis of Diffusion and Contagion Processes on Networks
2018-06-07	NetLogoR	Build and Run Spatially Explicit Agent-Based Models
2018-06-07	pcse	Panel-Corrected Standard Error Estimation in R
2018-06-07	polysat	Tools for Polyploid Microsatellite Analysis
2018-06-07	RegularizedSCA	Regularized Simultaneous Component Based Data Integration
2018-06-07	rprev	Estimating Disease Prevalence from Registry Data
2018-06-07	ScottKnott	The ScottKnott Clustering Algorithm
2018-06-07	sievetest	Laboratory Sieve Test Reporting Functions
2018-06-07	skimr	Compact and Flexible Summaries of Data
2018-06-07	spex	Spatial Extent Tools
2018-06-07	tabulizer	Bindings for 'Tabula' PDF Table Extractor Library
2018-06-07	textshape	Tools for Reshaping Text
2018-06-07	tigreBrowserWriter	'tigreBrowser' Database Writer
2018-06-07	treeplyr	'dplyr' Functionality for Matched Tree and Data Objects
2018-06-07	uCAREChemSuiteCLI	Resistome Predicter
2018-06-07	wikilake	Scrape Lake Metadata Tables from Wikipedia
2018-06-06	AGHmatrix	Relationship Matrices for Diploid and Autopolyploid Species
2018-06-06	bench	High Precision Timing of R Expressions
2018-06-06	BICORN	Integrative Inference of De Novo Cis-Regulatory Modules
2018-06-06	bjscrapeR	An API Wrapper for the Bureau of Justice Statistics (BJS)
2018-06-06	CREAM	Clustering of Genomic Regions Analysis Method
2018-06-06	evmix	Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2018-06-06	gamlss.dist	Distributions for Generalized Additive Models for Location Scale and Shape
2018-06-06	gustave	A User-Oriented Statistical Toolkit for Analytical Variance Estimation
2018-06-06	iptmnetr	Interface to the 'iPTMnet' API
2018-06-06	PBSmapping	Mapping Fisheries Data and Spatial Analysis Tools
2018-06-06	pds3	Manipulate PDS3 ODL Files
2018-06-06	plotlyGeoAssets	Render 'Plotly' Maps without an Internet Connection
2018-06-06	PxWebApiData	PX-Web Data by API
2018-06-06	rERR	Excess Relative Risk Models
2018-06-06	rppo	Access the Global Plant Phenology Data Portal
2018-06-06	rtrek	Datasets and Functions Relating to Star Trek
2018-06-06	sambia	A Collection of Techniques Correcting for Sample Selection Bias
2018-06-06	SPAtest	Score Test and Meta-Analysis Based on Saddlepoint Approximation
2018-06-05	alterryx	An 'API' Client for the 'Alteryx' Gallery
2018-06-05	boxcoxmix	Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects
2018-06-05	cdlTools	Tools to Download and Work with USDA Cropscape Data
2018-06-05	DepthProc	Statistical Depth Functions for Multivariate Analysis
2018-06-05	DHARMa	Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
2018-06-05	Dodge	Acceptance Sampling Ideas Originated by H.F. Dodge
2018-06-05	EpiStats	Tools for Epidemiologists
2018-06-05	extraDistr	Additional Univariate and Multivariate Distributions
2018-06-05	FIAR	Functional Integration Analysis in R
2018-06-05	FixedPoint	Algorithms for Finding Fixed Point Vectors of Functions
2018-06-05	gdm	Generalized Dissimilarity Modeling
2018-06-05	HH	Statistical Analysis and Data Display: Heiberger and Holland
2018-06-05	LendingClub	A Lending Club API Wrapper
2018-06-05	merTools	Tools for Analyzing Mixed Effect Regression Models
2018-06-05	networktools	Tools for Identifying Important Nodes in Networks
2018-06-05	nsprcomp	Non-Negative and Sparse PCA
2018-06-05	partykit	A Toolkit for Recursive Partytioning
2018-06-05	PLordprob	Multivariate Ordered Probit Model via Pairwise Likelihood
2018-06-05	plumber	An API Generator for R
2018-06-05	powerCompRisk	Power Analysis Tool for Joint Testing Hazards with Competing Risks Data
2018-06-05	RcppRoll	Efficient Rolling / Windowed Operations
2018-06-05	Rfmtool	Fuzzy Measure Tools
2018-06-05	ROI.plugin.qpoases	'qpOASES' Plugin for the 'R' Optimization Infrastructure
2018-06-05	seroincidence	Estimating Infection Rates from Serological Data
2018-06-05	serrsBayes	Bayesian Modelling of Raman Spectroscopy
2018-06-05	sp	Classes and Methods for Spatial Data
2018-06-05	SpatialNP	Multivariate Nonparametric Methods Based on Spatial Signs and Ranks
2018-06-05	Tcomp	Data from the 2010 Tourism Forecasting Competition
2018-06-05	tm.plugin.lexisnexis	Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework
2018-06-05	tvReg	Time-Varying Coefficients Linear Regression for Single and Multiple Equations
2018-06-04	antaresRead	Import, Manipulate and Explore the Results of an 'Antares' Simulation
2018-06-04	autovarCore	Automated Vector Autoregression Models and Networks
2018-06-04	beepr	Easily Play Notification Sounds on any Platform
2018-06-04	blockmodeling	Generalized and Classical Blockmodeling of Valued Networks
2018-06-04	bootRes	Bootstrapped Response and Correlation Functions
2018-06-04	CePa	Centrality-Based Pathway Enrichment
2018-06-04	Compositional	Compositional Data Analysis
2018-06-04	CVglasso	Lasso Penalized Precision Matrix Estimation
2018-06-04	glmnetcr	Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response
2018-06-04	ipeaData	Getting Data from IPEADATA
2018-06-04	KRIS	Keen and Reliable Interface Subroutines for Bioinformatic Analysis
2018-06-04	LPWC	Lag Penalized Weighted Correlation for Time Series Clustering
2018-06-04	mixdist	Finite Mixture Distribution Models
2018-06-04	nnTensor	Non-Negative Tensor Decomposition
2018-06-04	np	Nonparametric Kernel Smoothing Methods for Mixed Data Types
2018-06-04	pcalg	Methods for Graphical Models and Causal Inference
2018-06-04	pkr	Pharmacokinetics in R
2018-06-04	qrcmNP	Nonlinear and Penalized Quantile Regression Coefficients Modeling
2018-06-04	ranger	A Fast Implementation of Random Forests
2018-06-04	rcane	Different Numeric Optimizations to Estimate Parameter Coefficients
2018-06-04	readabs	Read 'Excel' Files from the Australian Bureau of Statistics into Tidy Data Sets
2018-06-04	RmarineHeatWaves	Detect Marine Heat Waves and Marine Cold Spells
2018-06-04	rres	Realized Relatedness Estimation and Simulation
2018-06-04	rwc	Random Walk Covariance Models
2018-06-04	ssh	Secure Shell (SSH) Client for R
2018-06-04	tangram	The Grammar of Tables
2018-06-04	tseries	Time Series Analysis and Computational Finance
2018-06-04	wISAM	Weighted Inbred Strain Association Mapping
2018-06-03	cardidates	Identification of Cardinal Dates in Ecological Time Series
2018-06-03	eigenmodel	Semiparametric Factor and Regression Models for Symmetric Relational Data
2018-06-03	excerptr	Excerpt Structuring Comments from Your Code File and Set a Table of Contents
2018-06-03	hergm	Hierarchical Exponential-Family Random Graph Models
2018-06-03	ibmdbR	IBM in-Database Analytics for R
2018-06-03	kSamples	K-Sample Rank Tests and their Combinations
2018-06-03	live	Local Interpretable (Model-Agnostic) Visual Explanations
2018-06-03	marelac	Tools for Aquatic Sciences
2018-06-03	mokken	Conducts Mokken Scale Analysis
2018-06-03	quickmapr	Quickly Map and Explore Spatial Data
2018-06-03	radir	Inverse-Regression Estimation of Radioactive Doses
2018-06-03	RedditExtractoR	Reddit Data Extraction Toolkit
2018-06-03	simecol	Simulation of Ecological (and Other) Dynamic Systems
2018-06-03	simsem	SIMulated Structural Equation Modeling
2018-06-03	SQRL	Database Query Interfaces
2018-06-03	tsDyn	Nonlinear Time Series Models with Regime Switching
2018-06-03	usmap	US Maps Including Alaska and Hawaii
2018-06-02	bib2df	Parse a BibTeX File to a data.frame
2018-06-02	LocalControl	Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence
2018-06-02	memapp	The Moving Epidemic Method Web Application
2018-06-02	PairedData	Paired Data Analysis
2018-06-02	pkgdown	Make Static HTML Documentation for a Package
2018-06-02	plsRcox	Partial Least Squares Regression for Cox Models and Related Techniques
2018-06-02	rasterVis	Visualization Methods for Raster Data
2018-06-02	seas	Seasonal Analysis and Graphics, Especially for Climatology
2018-06-02	shinymaterial	Implement Material Design in Shiny Applications
2018-06-02	sparseSVM	Solution Paths of Sparse High-Dimensional Support Vector Machine with Lasso or Elastic-Net Regularization
2018-06-02	SpatialEpi	Methods and Data for Spatial Epidemiology
2018-06-02	stplanr	Sustainable Transport Planning
2018-06-02	stream	Infrastructure for Data Stream Mining
2018-06-01	antaresProcessing	'Antares' Results Processing
2018-06-01	ccdrAlgorithm	CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
2018-06-01	clusterSEs	Calculate Cluster-Robust p-Values and Confidence Intervals
2018-06-01	colorednoise	Simulate Temporally Autocorrelated Populations
2018-06-01	congressbr	Downloads, Unpacks and Tidies Legislative Data from the Brazilian Federal Senate and Chamber of Deputies
2018-06-01	DRIP	Discontinuous Regression and Image Processing
2018-06-01	FeaLect	Scores Features for Feature Selection
2018-06-01	fso	Fuzzy Set Ordination
2018-06-01	furniture	Tables for Quantitative Scientists
2018-06-01	hmi	Hierarchical Multiple Imputation
2018-06-01	hNMF	Hierarchical Non-Negative Matrix Factorization
2018-06-01	mem	The Moving Epidemic Method
2018-06-01	mixOmics	Omics Data Integration Project
2018-06-01	nitrcbot	Download Image Files from the 'NeuroImaging Tools and Resources Collaboratory'
2018-06-01	OBsMD	Objective Bayesian Model Discrimination in Follow-Up Designs
2018-06-01	odds.converter	Betting Odds Conversion
2018-06-01	packrat	A Dependency Management System for Projects and their R Package Dependencies
2018-06-01	PerFit	Person Fit
2018-06-01	PSTR	Panel Smooth Transition Regression Modelling
2018-06-01	RNentropy	Entropy Based Method for the Detection of Significant Variation in Gene Expression Data
2018-06-01	Rodam	Wrapper Functions for 'ODAM' (Open Data for Access and Mining) Web Services
2018-06-01	sitree	Single Tree Simulator
2018-06-01	sitreeE	Sitree Extensions
2018-06-01	spotGUI	Graphical User Interface for the Package 'SPOT'
2018-06-01	TSrepr	Time Series Representations
2018-06-01	WaveletArima	Wavelet ARIMA Model
2018-06-01	welchADF	Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality
2018-05-31	CBT	Confidence Bound Target Algorithm
2018-05-31	conflicted	An Alternative Conflict Resolution Strategy
2018-05-31	mdendro	Variable-Group Methods for Agglomerative Hierarchical Clustering
2018-05-31	metaforest	Exploring Heterogeneity in Meta-Analysis using Random Forests
2018-05-31	MM4LMM	Inference of Linear Mixed Models Through MM Algorithm
2018-05-31	mvtnorm	Multivariate Normal and t Distributions
2018-05-31	OpenRepGrid	Tools to Analyze Repertory Grid Data
2018-05-31	palasso	Paired Lasso Regression
2018-05-31	phylolm	Phylogenetic Linear Regression
2018-05-31	redux	R Bindings to 'hiredis'
2018-05-31	RJafroc	Modeling, Analysis, Validation and Visualization of Observer Performance Studies in Diagnostic Radiology
2018-05-31	storr	Simple Key Value Stores
2018-05-30	abbyyR	Access to Abbyy Optical Character Recognition (OCR) API
2018-05-30	bestNormalize	Normalizing Transformation Functions
2018-05-30	comclim	Community Climate Statistics
2018-05-30	comperank	Ranking Methods for Competition Results
2018-05-30	crypto	Cryptocurrency Market Data
2018-05-30	DataExplorer	Data Explorer
2018-05-30	DDoutlier	Distance & Density-Based Outlier Detection
2018-05-30	eeptools	Convenience Functions for Education Data
2018-05-30	GENLIB	Genealogical Data Analysis
2018-05-30	glmmboot	Bootstrap Resampling for Mixed Effects and Plain Models
2018-05-30	graphkernels	Graph Kernels
2018-05-30	hotspots	Hot Spots
2018-05-30	imager	Image Processing Library Based on 'CImg'
2018-05-30	lacm	Latent Autoregressive Count Models
2018-05-30	mixsmsn	Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
2018-05-30	nricens	NRI for Risk Prediction Models with Time to Event and Binary Response Data
2018-05-30	occ	Estimates PET Neuroreceptor Occupancies
2018-05-30	overlapptest	Test Overlapping of Polygons Against Random Rotation
2018-05-30	plan	Tools for Project Planning
2018-05-30	PVR	Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve
2018-05-30	r2d3	Interface to 'D3' Visualizations
2018-05-30	reReg	Recurrent Event Regression
2018-05-30	rollmatch	Rolling Entry Matching
2018-05-30	scico	Colour Palettes Based on the Scientific Colour-Maps
2018-05-30	Semblance	Pair-Wise Semblance Using a Rank-Based Kernel
2018-05-30	servr	A Simple HTTP Server to Serve Static Files or Dynamic Documents
2018-05-30	shinyWidgets	Custom Inputs Widgets for Shiny
2018-05-30	SimEUCartelLaw	Simulation of Legal Exemption System for European Cartel Law
2018-05-30	SNPknock	Knockoffs for Hidden Markov Models and Genetic Data
2018-05-30	SpATS	Spatial Analysis of Field Trials with Splines
2018-05-30	Spbsampling	Spatially Balanced Samples
2018-05-30	splusTimeDate	Times and Dates from S-PLUS
2018-05-30	stargazer	Well-Formatted Regression and Summary Statistics Tables
2018-05-30	swissMrP	Multilevel Regression with Post-Stratification (MrP) for Switzerland
2018-05-30	TreeDep	Air Pollution Removal by Dry Deposition on Trees
2018-05-29	ADMM	Algorithms using Alternating Direction Method of Multipliers
2018-05-29	AGD	Analysis of Growth Data
2018-05-29	apcluster	Affinity Propagation Clustering
2018-05-29	bit	A Class for Vectors of 1-Bit Booleans
2018-05-29	brainGraph	Graph Theory Analysis of Brain MRI Data
2018-05-29	BuyseTest	Generalized Pairwise Comparisons
2018-05-29	c3	'C3.js' Chart Library
2018-05-29	causaleffect	Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2018-05-29	ChainLadder	Statistical Methods and Models for Claims Reserving in General Insurance
2018-05-29	ePCR	Ensemble Penalized Cox Regression for Survival Prediction
2018-05-29	Equalden.HD	Testing the Equality of a High Dimensional Set of Densities
2018-05-29	FarmTest	Factor Adjusted Robust Multiple Testing
2018-05-29	ggfocus	Focus on Specific Factor Levels in your ggplot()
2018-05-29	glmmEP	Generalized Linear Mixed Model Analysis via Expectation Propagation
2018-05-29	goric	Generalized Order-Restricted Information Criterion
2018-05-29	GrimR	Calculate Optical Parameters from Spindle Stage Measurements
2018-05-29	HardyWeinberg	Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
2018-05-29	hdbinseg	Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation
2018-05-29	infoDecompuTE	Information Decomposition of Two-Phase Experiments
2018-05-29	iqLearn	Interactive Q-Learning
2018-05-29	KoulMde	Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model by Coordinate Descent Algorithm
2018-05-29	metaBLUE	BLUE for Combining Location and Scale Information in a Meta-Analysis
2018-05-29	metaLik	Likelihood Inference in Meta-Analysis and Meta-Regression Models
2018-05-29	NFWdist	The Standard Distribution Functions for the 3D NFW Profile
2018-05-29	ODEsensitivity	Sensitivity Analysis of Ordinary Differential Equations
2018-05-29	OpVaR	Statistical Methods for Modeling Operational Risk
2018-05-29	purrr	Functional Programming Tools
2018-05-29	purrrlyr	Tools at the Intersection of 'purrr' and 'dplyr'
2018-05-29	quantreg	Quantile Regression
2018-05-29	ramcmc	Robust Adaptive Metropolis Algorithm
2018-05-29	RatingScaleReduction	Rating Scale Reduction Procedure
2018-05-29	RchivalTag	Analyzing Archival Tagging Data
2018-05-29	rdwd	Select and Download Climate Data from 'DWD' (German Weather Service)
2018-05-29	rJava	Low-Level R to Java Interface
2018-05-29	robCompositions	Robust Estimation for Compositional Data
2018-05-29	rstpm2	Generalized Survival Models
2018-05-29	rtsplot	Time Series Plot
2018-05-29	sbgcop	Semiparametric Bayesian Gaussian Copula Estimation and Imputation
2018-05-29	scopr	Read Ethoscope Data
2018-05-29	SemiMarkov	Multi-States Semi-Markov Models
2018-05-29	simPop	Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2018-05-29	SiZer	Significant Zero Crossings
2018-05-29	splusTimeSeries	Time Series from S-PLUS
2018-05-29	StructFDR	False Discovery Control Procedure Integrating the Prior Structure Information
2018-05-29	tempR	Temporal Sensory Data Analysis
2018-05-29	tidytext	Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
2018-05-29	VARSEDIG	An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy
2018-05-29	vegclust	Fuzzy Clustering of Vegetation Data
2018-05-29	waved	Wavelet Deconvolution
2018-05-29	yasp	String Functions for Compact R Code
2018-05-28	CUFF	Charles's Utility Function using Formula
2018-05-28	DClusterm	Model-Based Detection of Disease Clusters
2018-05-28	deeplr	Interface to the 'DeepL' Translation API
2018-05-28	ggetho	Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data
2018-05-28	grattan	Australian Tax Policy Analysis
2018-05-28	HSAUR3	A Handbook of Statistical Analyses Using R (3rd Edition)
2018-05-28	joineRML	Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes
2018-05-28	kde1d	Univariate Kernel Density Estimation
2018-05-28	manifestoR	Access and Process Data and Documents of the Manifesto Project
2018-05-28	mipfp	Multidimensional Iterative Proportional Fitting and Alternative Models
2018-05-28	osrmr	Wrapper for the 'OSRM' API
2018-05-28	plotMElm	Plot Marginal Effects from Linear Models
2018-05-28	PriorGen	Generates Prior Distributions for Proportions
2018-05-28	qgam	Smooth Additive Quantile Regression Models
2018-05-28	RHMS	Hydrologic Modelling System for R Users
2018-05-28	sentometrics	An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction
2018-05-28	survBootOutliers	Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis
2018-05-28	WRSS	Water Resources System Simulator
2018-05-27	bestglm	Best Subset GLM and Regression Utilities
2018-05-27	birdnik	Connector for the Wordnik API
2018-05-27	data.table	Extension of 'data.frame'
2018-05-27	ddpcr	Analysis and Visualization of Droplet Digital PCR in R and on the Web
2018-05-27	FloodMapper	Cross-Scale Flooding Prediction under Heavy Precipitation
2018-05-27	Haplin	Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2018-05-27	irregulAR1	Functions for Irregularly Sampled AR(1) Processes
2018-05-27	messaging	Conveniently Issue Messages, Warnings, and Errors
2018-05-27	mritc	MRI Tissue Classification
2018-05-27	pdftools	Text Extraction, Rendering and Converting of PDF Documents
2018-05-27	rdatacite	'DataCite' Client for 'OAI-PMH' Methods and their Search API
2018-05-27	rmutil	Utilities for Nonlinear Regression and Repeated Measurements Models
2018-05-27	rusk	Beautiful Graphical Representation of Multiplication Tables on a Modular Circle
2018-05-27	RWeka	R/Weka Interface
2018-05-27	stemmatology	Stemmatological Analysis of Textual Traditions
2018-05-27	tricolore	A Flexible Color Scale for Ternary Compositions
2018-05-27	xtensor	Headers for the 'xtensor' Library
2018-05-26	aspect	A General Framework for Multivariate Analysis with Optimal Scaling
2018-05-26	caret	Classification and Regression Training
2018-05-26	CVST	Fast Cross-Validation via Sequential Testing
2018-05-26	CVXR	Disciplined Convex Optimization
2018-05-26	eRm	Extended Rasch Modeling
2018-05-26	ggfortify	Data Visualization Tools for Statistical Analysis Results
2018-05-26	GoFKernel	Testing Goodness-of-Fit with the Kernel Density Estimator
2018-05-26	hamlet	Hierarchical Optimal Matching and Machine Learning Toolbox
2018-05-26	HLSM	Hierarchical Latent Space Network Model
2018-05-26	homals	Gifi Methods for Optimal Scaling
2018-05-26	htmlTable	Advanced Tables for Markdown/HTML
2018-05-26	MarkowitzR	Statistical Significance of the Markowitz Portfolio
2018-05-26	MetaLonDA	Metagenomics Longitudinal Differential Abundance Method
2018-05-26	MortCast	Estimation and Projection of Age-Specific Mortality Rates
2018-05-26	MPsychoR	Modern Psychometrics with R
2018-05-26	oceanmap	A Plotting Toolbox for 2D Oceanographic Data
2018-05-26	openxlsx	Read, Write and Edit XLSX Files
2018-05-26	OTUtable	North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions
2018-05-26	PRISMA	Protocol Inspection and State Machine Analysis
2018-05-26	readstata13	Import 'Stata' Data Files
2018-05-26	sglasso	Lasso Method for RCON(V,E) Models
2018-05-26	stable	Probability Functions and Generalized Regression Models for Stable Distributions
2018-05-26	StratSel	Strategic Selection Estimator
2018-05-26	stylo	Stylometric Analyses
2018-05-25	aws.s3	'AWS S3' Client Package
2018-05-25	bigsplines	Smoothing Splines for Large Samples
2018-05-25	clampSeg	Idealisation of Patch Clamp Recordings
2018-05-25	cricketr	Analyze Cricketers Based on ESPN Cricinfo Statsguru
2018-05-25	directlabels	Direct Labels for Multicolor Plots
2018-05-25	DisHet	Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
2018-05-25	dtwSat	Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis
2018-05-25	edgarWebR	SEC Filings Access
2018-05-25	FuncMap	Hive Plots of R Package Function Calls
2018-05-25	googleway	Accesses Google Maps APIs to Retrieve Data and Plot Maps
2018-05-25	mbest	Moment-Based Estimation for Hierarchical Models
2018-05-25	openCR	Open Population Capture-Recapture
2018-05-25	PeakSegOptimal	Optimal Segmentation Subject to Up-Down Constraints
2018-05-25	phyloclim	Integrating Phylogenetics and Climatic Niche Modeling
2018-05-25	pkgmaker	Development Utilities for R Packages
2018-05-25	ppitables	Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI)
2018-05-25	ptw	Parametric Time Warping
2018-05-25	rcongresso	Wraps the API for the Brazilian Chamber of Deputies
2018-05-25	sparklyr	R Interface to Apache Spark
2018-05-25	TAM	Test Analysis Modules
2018-05-25	tuneRanger	Tune Random Forest of the 'ranger' Package
2018-05-24	ALEPlot	Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
2018-05-24	BiDAG	Bayesian Inference for Directed Acyclic Graphs (BiDAG)
2018-05-24	cfma	Causal Functional Mediation Analysis
2018-05-24	cmce	Computer Model Calibration for Deterministic and Stochastic Simulators
2018-05-24	dfcomb	Phase I/II Adaptive Dose-Finding Design for Combination Studies
2018-05-24	dfmta	Phase I/II Adaptive Dose-Finding Design for MTA
2018-05-24	DPP	Inference of Parameters of Normal Distributions from a Mixture of Normals
2018-05-24	eegkit	Toolkit for Electroencephalography Data
2018-05-24	epiphy	Analysis of Plant Disease Epidemics
2018-05-24	event	Event History Procedures and Models
2018-05-24	fastM	Fast Computation of Multivariate M-Estimators
2018-05-24	gamlss.spatial	Spatial Terms in Generalized Additive Models for Location Scale and Shape Models
2018-05-24	ica	Independent Component Analysis
2018-05-24	knitrBootstrap	'knitr' Bootstrap Framework
2018-05-24	labelled	Manipulating Labelled Data
2018-05-24	ldat	Large Data Sets
2018-05-24	locpol	Kernel Local Polynomial Regression
2018-05-24	lvec	Out of Memory Vectors
2018-05-24	MMPPsampler	Efficient Gibbs-Sampler for Markov-Modulated-Poisson-Processes
2018-05-24	ncf	Spatial Covariance Functions
2018-05-24	neurohcp	Human 'Connectome' Project Interface
2018-05-24	PCPS	Principal Coordinates of Phylogenetic Structure
2018-05-24	riv	Robust Instrumental Variables Estimator
2018-05-24	rrcov	Scalable Robust Estimators with High Breakdown Point
2018-05-24	rscopus	Scopus Database 'API' Interface
2018-05-24	SEA	Segregation Analysis
2018-05-24	sklarsomega	Measuring Agreement Using Sklar's Omega Coefficient
2018-05-24	tclust	Robust Trimmed Clustering
2018-05-24	utf8	Unicode Text Processing
2018-05-24	weibullness	Goodness-of-Fit Test for Weibull (Weibullness Test)
2018-05-23	AdaptFitOS	Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests
2018-05-23	adespatial	Multivariate Multiscale Spatial Analysis
2018-05-23	bssm	Bayesian Inference of Non-Linear and Non-Gaussian State Space Models
2018-05-23	btb	Beyond the Border - Kernel Density Estimation for Urban Geography
2018-05-23	CLME	Constrained Inference for Linear Mixed Effects Models
2018-05-23	dplR	Dendrochronology Program Library in R
2018-05-23	evtree	Evolutionary Learning of Globally Optimal Trees
2018-05-23	excel.link	Convenient Data Exchange with Microsoft Excel
2018-05-23	frailtyEM	Fitting Frailty Models with the EM Algorithm
2018-05-23	gsEasy	Gene Set Enrichment Analysis in R
2018-05-23	histmdl	A Most Informative Histogram-Like Model
2018-05-23	icd.data	International Classifcation of Diseases (ICD) Data
2018-05-23	latdiag	Draws Diagrams Useful for Checking Latent Scales
2018-05-23	LS2W	Locally Stationary Two-Dimensional Wavelet Process Estimation Scheme
2018-05-23	mleap	Interface to 'MLeap'
2018-05-23	monotonicity	Test for Monotonicity in Expected Asset Returns, Sorted by Portfolios
2018-05-23	mratios	Ratios of Coefficients in the General Linear Model
2018-05-23	myTAI	Evolutionary Transcriptomics
2018-05-23	prodigenr	Research Project Directory Generator
2018-05-23	rvalues	R-Values for Ranking in High-Dimensional Settings
2018-05-23	rvcheck	R/Package Version Check
2018-05-23	synlik	Synthetic Likelihood Methods for Intractable Likelihoods
2018-05-23	trekfont	Star Trek Fonts Collection
2018-05-23	ukbtools	Manipulate and Explore UK Biobank Data
2018-05-23	unsystation	Stationarity Test Based on Unsystematic Sub-Sampling
2018-05-23	vardpoor	Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2018-05-22	ALA4R	Atlas of Living Australia (ALA) Data and Resources in R
2018-05-22	AppliedPredictiveModeling	Functions and Data Sets for 'Applied Predictive Modeling'
2018-05-22	aprof	Amdahl's Profiler, Directed Optimization Made Easy
2018-05-22	BIS	Programmatic Access to Bank for International Settlements Data
2018-05-22	C50	C5.0 Decision Trees and Rule-Based Models
2018-05-22	cAIC4	Conditional Akaike Information Criterion for 'lme4'
2018-05-22	Cprob	The Conditional Probability Function of a Competing Event
2018-05-22	cranly	Package Directives and Collaboration Networks in CRAN
2018-05-22	cruts	Interface to Climatic Research Unit Time-Series Version 3.21 Data
2018-05-22	devEMF	EMF Graphics Output Device
2018-05-22	FastHCS	FastHCS Robust Algorithm for Principal Component Analysis
2018-05-22	FastPCS	FastPCS Robust Fit of Multivariate Location and Scatter
2018-05-22	FinePop	Fine-Scale Population Analysis
2018-05-22	genotypeR	SNP Genotype Marker Design and Analysis
2018-05-22	ICtest	Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction
2018-05-22	interlineaR	Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software
2018-05-22	intRegGOF	Integrated Regression Goodness of Fit
2018-05-22	kmi	Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting
2018-05-22	lgcp	Log-Gaussian Cox Process
2018-05-22	mapplots	Data Visualisation on Maps
2018-05-22	margins	Marginal Effects for Model Objects
2018-05-22	MaskJointDensity	Masking, Unmasking and Restoring Confidential Data
2018-05-22	microPop	Modelling Microbial Populations
2018-05-22	miniGUI	Tcl/Tk Quick and Simple Function GUI
2018-05-22	ODEnetwork	Network of Differential Equations
2018-05-22	openair	Tools for the Analysis of Air Pollution Data
2018-05-22	ore	An R Interface to the Onigmo Regular Expression Library
2018-05-22	PetfindeR	'Petfinder' API Wrapper
2018-05-22	philentropy	Similarity and Distance Quantification Between Probability Functions
2018-05-22	prediction	Tidy, Type-Safe 'prediction()' Methods
2018-05-22	prioritizrdata	Conservation Planning Data Sets
2018-05-22	qmethod	Analysis of Subjective Perspectives Using Q Methodology
2018-05-22	quadprogXT	Quadratic Programming with Absolute Value Constraints
2018-05-22	qut	Quantile Universal Threshold
2018-05-22	rebmix	Finite Mixture Modeling, Clustering & Classification
2018-05-22	regnet	Network-Based Regularization for Generalized Linear Models
2018-05-22	Rraven	Connecting R and 'Raven' Sound Analysis Software
2018-05-22	rsinaica	Download Data from Mexico's Air Quality Information System
2018-05-22	RSpectra	Solvers for Large-Scale Eigenvalue and SVD Problems
2018-05-22	smdata	Data to Accompany Smithson & Merkle, 2013
2018-05-22	solrad	Calculating Solar Radiation and Related Variables Based on Location, Time and Topographical Conditions
2018-05-22	spatsurv	Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2018-05-22	spMaps	Europe SpatialPolygonsDataFrame Builder
2018-05-22	srvyr	'dplyr'-Like Syntax for Summary Statistics of Survey Data
2018-05-22	templates	A System for Working with Templates
2018-05-22	ziphsmm	Zero-Inflated Poisson Hidden (Semi-)Markov Models
2018-05-21	AIG	Automatic Item Generator
2018-05-21	BINCOR	Estimate the Correlation Between Two Irregular Time Series
2018-05-21	clubSandwich	Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
2018-05-21	compareDF	Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
2018-05-21	Cubist	Rule- And Instance-Based Regression Modeling
2018-05-21	easycsv	Load Multiple 'csv' and 'txt' Tables
2018-05-21	EFAutilities	Utility Functions for Exploratory Factor Analysis
2018-05-21	FuzzyAHP	(Fuzzy) AHP Calculation
2018-05-21	gammSlice	Generalized Additive Mixed Model Analysis via Slice Sampling
2018-05-21	hitandrun	"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2018-05-21	hnp	Half-Normal Plots with Simulation Envelopes
2018-05-21	kableExtra	Construct Complex Table with 'kable' and Pipe Syntax
2018-05-21	KFAS	Kalman Filter and Smoother for Exponential Family State Space Models
2018-05-21	logiBin	Binning Variables to Use in Logistic Regression
2018-05-21	mixAK	Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2018-05-21	neutralitytestr	Test for a Neutral Evolutionary Model in Cancer Sequencing Data
2018-05-21	nima	Nima Hejazi's R Toolbox
2018-05-21	quantregGrowth	Growth Charts via Regression Quantiles
2018-05-21	SARP.compo	Network-based Interpretation of Changes in Compositional Data
2018-05-21	SIRItoGTFS	Compare SIRI Datasets to GTFS Tables
2018-05-21	smaa	Stochastic Multi-Criteria Acceptability Analysis
2018-05-21	spuRs	Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"
2018-05-21	tables	Formula-Driven Table Generation
2018-05-21	tabularaster	Tidy Tools for 'Raster' Data
2018-05-21	worrms	World Register of Marine Species (WoRMS) Client
2018-05-21	yuima	The YUIMA Project Package for SDEs
2018-05-20	CovTools	Statistical Tools for Covariance Analysis
2018-05-20	flexCWM	Flexible Cluster-Weighted Modeling
2018-05-20	ini	Read and Write '.ini' Files
2018-05-20	MAVE	Methods for Dimension Reduction
2018-05-20	NUCOMBog	NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate
2018-05-20	PopGenome	An Efficient Swiss Army Knife for Population Genomic Analyses
2018-05-20	ritis	Integrated Taxonomic Information System Client
2018-05-20	ruler	Tidy Data Validation Reports
2018-05-20	season	Seasonal Analysis of Health Data
2018-05-20	TAQMNGR	Manage Tick-by-Tick Transaction Data
2018-05-20	tcpl	ToxCast Data Analysis Pipeline
2018-05-19	BayesFactor	Computation of Bayes Factors for Common Designs
2018-05-19	biwavelet	Conduct Univariate and Bivariate Wavelet Analyses
2018-05-19	dbscan	Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2018-05-19	DetMCD	Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
2018-05-19	DetR	Suite of Deterministic and Robust Algorithms for Linear Regression
2018-05-19	emdbook	Support Functions and Data for "Ecological Models and Data"
2018-05-19	hdme	High-Dimensional Regression with Measurement Error
2018-05-19	HURDAT	Hurricane Re-Analysis Project
2018-05-19	keyholder	Store Data About Rows
2018-05-19	kutils	Project Management Tools
2018-05-19	mvnmle	ML Estimation for Multivariate Normal Data with Missing Values
2018-05-19	pbmcapply	Tracking the Progress of Mc*pply with Progress Bar
2018-05-19	pheatmap	Pretty Heatmaps
2018-05-19	PMCMR	Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2018-05-19	popReconstruct	Reconstruct Human Populations of the Recent Past
2018-05-19	primefactr	Use Prime Factorization for Computations
2018-05-19	spaMM	Mixed-Effect Models, Particularly Spatial Models
2018-05-19	StepSignalMargiLike	Step-Wise Signal Extraction via Marginal Likelihood
2018-05-19	synchrony	Methods for Computing Spatial, Temporal, and Spatiotemporal Statistics
2018-05-19	wakefield	Generate Random Data Sets
2018-05-18	BayesX	R Utilities Accompanying the Software Package BayesX
2018-05-18	BBI	Benthic Biotic Indices Calculation from Composition Data
2018-05-18	Biocomb	Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
2018-05-18	BusinessDuration	Calculates Business Duration Between Two Dates
2018-05-18	childesr	Accessing the 'CHILDES' Database
2018-05-18	CompareCausalNetworks	Interface to Diverse Estimation Methods of Causal Networks
2018-05-18	compareGroups	Descriptive Analysis by Groups
2018-05-18	covr	Test Coverage for Packages
2018-05-18	CrossValidate	Classes and Methods for Cross Validation of "Class Prediction" Algorithms
2018-05-18	DEploid	Deconvolute Mixed Genomes with Unknown Proportions
2018-05-18	DstarM	Analyze Two Choice Reaction Time Data with the D*M Method
2018-05-18	dtw	Dynamic Time Warping Algorithms
2018-05-18	EValue	Sensitivity Analyses for Unmeasured Confounding in Observational Studies and Meta-Analyses
2018-05-18	FSA	Simple Fisheries Stock Assessment Methods
2018-05-18	GAparsimony	Searching Parsimony Models with Genetic Algorithms
2018-05-18	GenAlgo	Classes and Methods to Use Genetic Algorithms for Feature Selection
2018-05-18	ggjoy	Joyplots in 'ggplot2'
2018-05-18	inline	Functions to Inline C, C++, Fortran Function Calls from R
2018-05-18	joineR	Joint Modelling of Repeated Measurements and Time-to-Event Data
2018-05-18	Kpart	Cubic Spline Fitting with Knot Selection
2018-05-18	label.switching	Relabelling MCMC Outputs of Mixture Models
2018-05-18	miniUI	Shiny UI Widgets for Small Screens
2018-05-18	MixSAL	Mixtures of Multivariate Shifted Asymmetric Laplace (SAL) Distributions
2018-05-18	mmabig	Multiple Mediation Analysis for Big Data Sets
2018-05-18	Modeler	Classes and Methods for Training and Using Binary Prediction Models
2018-05-18	multDM	Multivariate Version of the Diebold-Mariano Test
2018-05-18	NormPsy	Normalisation of Psychometric Tests
2018-05-18	npsr	Validate Instrumental Variables using NPS
2018-05-18	PCDimension	Finding the Number of Significant Principal Components
2018-05-18	permutes	Permutation Tests for Time Series Data
2018-05-18	PhysicalActivity	Process Accelerometer Data for Physical Activity Measurement
2018-05-18	randgeo	Generate Random 'WKT' or 'GeoJSON'
2018-05-18	rbgm	Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model
2018-05-18	rdist	Calculate Pairwise Distances
2018-05-18	repr	Serializable Representations
2018-05-18	rsurface	Design of Rotatable Central Composite Experiments and Response Surface Analysis
2018-05-18	RUnit	R Unit Test Framework
2018-05-18	SeqFeatR	A Tool to Associate FASTA Sequences and Features
2018-05-18	SIBERG	Systematic Identification of Bimodally Expressed Genes Using RNAseq Data
2018-05-18	simsurv	Simulate Survival Data
2018-05-18	smoothAPC	Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects
2018-05-18	spt	Sierpinski Pedal Triangle
2018-05-18	stR	STR Decomposition
2018-05-18	tidyr	Easily Tidy Data with 'spread()' and 'gather()' Functions
2018-05-18	tryCatchLog	Advanced 'tryCatch()' and 'try()' Functions
2018-05-18	Umpire	Simulating Realistic Gene Expression Data
2018-05-17	adagio	Discrete and Global Optimization Routines
2018-05-17	adwave	Wavelet Analysis of Genomic Data from Admixed Populations
2018-05-17	ASGS.foyer	Interface to the Australian Statistical Geography Standard
2018-05-17	bootsPLS	Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2018-05-17	BVSNLP	Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors
2018-05-17	ClassComparison	Classes and Methods for "Class Comparison" Problems on Microarrays
2018-05-17	colocalization	Normalized Spatial Intensity Correlation
2018-05-17	contfrac	Continued Fractions
2018-05-17	CrypticIBDcheck	Identifying Cryptic Relatedness in Genetic Association Studies
2018-05-17	ctv	CRAN Task Views
2018-05-17	datadogr	R Client for 'Datadog' API
2018-05-17	diffusr	Network Diffusion Algorithms
2018-05-17	emg	Exponentially Modified Gaussian (EMG) Distribution
2018-05-17	emulator	Bayesian Emulation of Computer Programs
2018-05-17	ExpDes	Experimental Designs
2018-05-17	ExpDes.pt	Pacote Experimental Designs (Portuguese)
2018-05-17	fat2Lpoly	Two-Locus Family-Based Association Test with Polytomous Outcome
2018-05-17	fracprolif	Fraction Proliferation via a Quiescent Growth Model
2018-05-17	geigen	Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
2018-05-17	GGally	Extension to 'ggplot2'
2018-05-17	hermite	Generalized Hermite Distribution
2018-05-17	implyr	R Interface for Apache Impala
2018-05-17	intccr	Semiparametric Competing Risks Regression under Interval Censoring
2018-05-17	IRdisplay	'Jupyter' Display Machinery
2018-05-17	lambda.r	Modeling Data with Functional Programming
2018-05-17	LeLogicielR	Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (French)
2018-05-17	matchMulti	Optimal Multilevel Matching using a Network Algorithm
2018-05-17	memery	Internet Memes for Data Analysts
2018-05-17	MLML2R	Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions
2018-05-17	MMS	Fixed Effects Selection in Linear Mixed Models
2018-05-17	modTurPoint	Estimate ED50 Based on Modified Turning Point Method
2018-05-17	mvinfluence	Influence Measures and Diagnostic Plots for Multivariate Linear Models
2018-05-17	nleqslv	Solve Systems of Nonlinear Equations
2018-05-17	numbers	Number-Theoretic Functions
2018-05-17	oompaBase	Class Unions, Matrix Operations, and Color Schemes for OOMPA
2018-05-17	orsk	Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2018-05-17	osmdata	Import 'OpenStreetMap' Data as Simple Features or Spatial Objects
2018-05-17	pmc	Phylogenetic Monte Carlo
2018-05-17	Polychrome	Qualitative Palettes with Many Colors
2018-05-17	PolynomF	Polynomials in R
2018-05-17	popprxl	Read GenAlEx Files Directly from Excel
2018-05-17	PortfolioAnalytics	Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios
2018-05-17	PreProcess	Basic Functions for Pre-Processing Microarrays
2018-05-17	psychotools	Psychometric Modeling Infrastructure
2018-05-17	rcbsubset	Optimal Subset Matching with Refined Covariate Balance
2018-05-17	REddyProc	Post Processing of (Half-)Hourly Eddy-Covariance Measurements
2018-05-17	rfbCNPJ	Downloads and Parses Data from the Department of Federal Revenue in Brazil
2018-05-17	Rgbp	Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2018-05-17	robfilter	Robust Time Series Filters
2018-05-17	rtf	Rich Text Format (RTF) Output
2018-05-17	sdef	Synthesizing List of Differentially Expressed Features
2018-05-17	sf	Simple Features for R
2018-05-17	sFFLHD	Sequential Full Factorial-Based Latin Hypercube Design
2018-05-17	shiny	Web Application Framework for R
2018-05-17	simsalapar	Tools for Simulation Studies in Parallel
2018-05-17	sparseIndexTracking	Design of Portfolio of Stocks to Track an Index
2018-05-17	survsim	Simulation of Simple and Complex Survival Data
2018-05-17	tabr	Create Guitar Tablature
2018-05-17	TailRank	The Tail-Rank Statistic
2018-05-17	tukeytrend	Tukeys Trend Test via Multiple Marginal Models
2018-05-17	vegan	Community Ecology Package
2018-05-17	VNM	Finding Multiple-Objective Optimal Designs for the 4-Parameter Logistic Model
2018-05-17	webmockr	Stubbing and Setting Expectations on 'HTTP' Requests
2018-05-17	YuGene	A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
2018-05-17	zetadiv	Functions to Compute Compositional Turnover Using Zeta Diversity
2018-05-16	astrochron	A Computational Tool for Astrochronology
2018-05-16	BiDimRegression	Calculates the Bidimensional Regression Between Two 2D Configurations
2018-05-16	biogas	Process Biogas Data and Predict Biogas Production
2018-05-16	boral	Bayesian Ordination and Regression AnaLysis
2018-05-16	ChoR	Chordalysis R Package
2018-05-16	codep	Multiscale Codependence Analysis
2018-05-16	datasus	An Interface to DATASUS System
2018-05-16	edci	Edge Detection and Clustering in Images
2018-05-16	EdSurvey	Analysis of NCES Education Survey and Assessment Data
2018-05-16	eive	An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression
2018-05-16	FSelector	Selecting Attributes
2018-05-16	furrr	Apply Mapping Functions in Parallel using Futures
2018-05-16	getTBinR	Get WHO Tuberculosis Data
2018-05-16	GLSME	Generalized Least Squares with Measurement Error
2018-05-16	icsw	Inverse Compliance Score Weighting
2018-05-16	iemisc	Irucka Embry's Miscellaneous Functions
2018-05-16	kdist	K-Distribution and Weibull Paper
2018-05-16	microsynth	Synthetic Control Methods with Micro- And Meso-Level Data
2018-05-16	MM	The Multiplicative Multinomial Distribution
2018-05-16	mmeln	Estimation of Multinormal Mixture Distribution
2018-05-16	MPSEM	Modeling Phylogenetic Signals using Eigenvector Maps
2018-05-16	MSGARCH	Markov-Switching GARCH Models
2018-05-16	mvSLOUCH	Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2018-05-16	Nippon	Japanese Utility Functions and Data
2018-05-16	NipponMap	Japanese Map Data and Functions
2018-05-16	NSM3	Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2018-05-16	poibin	The Poisson Binomial Distribution
2018-05-16	popEpi	Functions for Epidemiological Analysis using Population Data
2018-05-16	PowerUpR	Power Analysis Tools for Multilevel Randomized Experiments
2018-05-16	rCBA	CBA Classifier for R
2018-05-16	RcmdrPlugin.MPAStats	R Commander Plug-in for MPA Statistics
2018-05-16	RECA	Relevant Component Analysis for Supervised Distance Metric Learning
2018-05-16	renpow	Renewable Power Systems and the Environment
2018-05-16	repo	A Data-Centered Data Flow Manager
2018-05-16	RNOmni	Omnibus Test for Genetic Association Analysis using the Rank Normal Transformation
2018-05-16	rust	Ratio-of-Uniforms Simulation with Transformation
2018-05-16	sdcMicro	Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2018-05-16	sharpr2	Estimating Regulatory Scores and Identifying ATAC-STARR Data
2018-05-16	SK	Segment-Based Ordinary Kriging and Segment-Based Regression Kriging for Spatial Prediction
2018-05-16	spartan	Simulation Parameter Analysis R Toolkit ApplicatioN: 'spartan'
2018-05-16	spgs	Statistical Patterns in Genomic Sequences
2018-05-16	SurvGSD	Group Sequential Design for a Clinical Trial with Censored Survival Data
2018-05-16	TFMPvalue	Efficient and Accurate P-Value Computation for Position Weight Matrices
2018-05-16	timedelay	Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2018-05-16	tkrgl	'TK' Widget Tools for 'rgl'
2018-05-15	CDECRetrieve	Retrieve Historical and Near Realtime Data from CDEC
2018-05-15	chromoMap	Interactive Visualization and Mapping of Human Chromosomes
2018-05-15	cowsay	Messages, Warnings, Strings with Ascii Animals
2018-05-15	damr	Interface to Drosophila Activity Monitor System Result Files
2018-05-15	decisionSupport	Quantitative Support of Decision Making under Uncertainty
2018-05-15	evidence	Analysis of Scientific Evidence Using Bayesian and Likelihood Methods
2018-05-15	fastLink	Fast Probabilistic Record Linkage with Missing Data
2018-05-15	ff	Memory-Efficient Storage of Large Data on Disk and Fast Access Functions
2018-05-15	GeneralizedHyperbolic	The Generalized Hyperbolic Distribution
2018-05-15	GERGM	Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2018-05-15	gge	Genotype Plus Genotype-by-Environment Biplots
2018-05-15	HTSSIP	High Throughput Sequencing of Stable Isotope Probing Data Analysis
2018-05-15	MCMCpack	Markov Chain Monte Carlo (MCMC) Package
2018-05-15	missRanger	Fast Imputation of Missing Values
2018-05-15	NNS	Nonlinear Nonparametric Statistics
2018-05-15	PBNPA	Permutation Based Non-Parametric Analysis of CRISPR Screen Data
2018-05-15	PUlasso	High-Dimensional Variable Selection with Presence-Only Data
2018-05-15	qdap	Bridging the Gap Between Qualitative Data and Quantitative Analysis
2018-05-15	quantable	Streamline Descriptive Analysis of Quantitative Data Matrices
2018-05-15	RAM	R for Amplicon-Sequencing-Based Microbial-Ecology
2018-05-15	RankAggreg	Weighted Rank Aggregation
2018-05-15	refund	Regression with Functional Data
2018-05-15	RnavGraphImageData	Image Data Used in the Loon Package Demos
2018-05-15	rngtools	Utility Functions for Working with Random Number Generators
2018-05-15	rsunlight	Interface to 'Sunlight' Foundation 'APIs'
2018-05-15	rTableICC	Random Generation of Contingency Tables
2018-05-15	shinyAce	Ace Editor Bindings for Shiny
2018-05-15	SpatialTools	Tools for Spatial Data Analysis
2018-05-15	specmine	Metabolomics and Spectral Data Analysis and Mining
2018-05-15	TreeBUGS	Hierarchical Multinomial Processing Tree Modeling
2018-05-15	tvR	Total Variation Regularization
2018-05-15	vortexR	Post Vortex Simulation Analysis
2018-05-14	amap	Another Multidimensional Analysis Package
2018-05-14	AnalyzeFMRI	Functions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format
2018-05-14	ASSA	Applied Singular Spectrum Analysis (ASSA)
2018-05-14	base64url	Fast and URL-Safe Base64 Encoder and Decoder
2018-05-14	bfp	Bayesian Fractional Polynomials
2018-05-14	catch	Covariate-Adjusted Tensor Classification in High-Dimensions
2018-05-14	cliqueMS	Annotation of Isotopes, Adducts and Fragmentation Adducts for in-Source LC/MS Metabolomics Data
2018-05-14	DatabaseConnectorJars	JAR Dependencies for the 'DatabaseConnector' Package
2018-05-14	datamaps	Create Interactive Web Maps with the 'JavaScript Datamaps' Library
2018-05-14	difR	Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
2018-05-14	dtp	Dynamic Panel Threshold Model
2018-05-14	facerec	An Interface for Face Recognition
2018-05-14	ffstream	Forgetting Factor Methods for Change Detection in Streaming Data
2018-05-14	ggsci	Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
2018-05-14	hdnom	Benchmarking and Visualization Toolkit for Penalized Cox Models
2018-05-14	hypergate	Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry
2018-05-14	IncDTW	Incremental Calculation of Dynamic Time Warping
2018-05-14	KSgeneral	Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution
2018-05-14	liftr	Containerize R Markdown Documents for Continuous Reproducibility
2018-05-14	msaenet	Multi-Step Adaptive Estimation Methods for Sparse Regressions
2018-05-14	MTA	Multiscalar Territorial Analysis
2018-05-14	ph2hetero	Stratified Adaptive Designs for Two-Stage Phase II Studies
2018-05-14	picante	Integrating Phylogenies and Ecology
2018-05-14	rbi	R Interface to LibBi
2018-05-14	RKEELdata	Datasets from 'KEEL' for it Use in 'RKEEL'
2018-05-14	RobustCalibration	Robust Calibration of Imperfect Mathematical Models
2018-05-14	rockchalk	Regression Estimation and Presentation
2018-05-14	RVAideMemoire	Testing and Plotting Procedures for Biostatistics
2018-05-14	secr	Spatially Explicit Capture-Recapture
2018-05-14	smacpod	Statistical Methods for the Analysis of Case-Control Point Data
2018-05-14	spearmanCI	Jackknife Euclidean / Empirical Likelihood Inference for Spearman's Rho
2018-05-14	SPOT	Sequential Parameter Optimization Toolbox
2018-05-14	tabulizerjars	'Java' .jar Files for 'tabulizer'
2018-05-14	treespace	Statistical Exploration of Landscapes of Phylogenetic Trees
2018-05-14	vcr	Record 'HTTP' Calls to Disk
2018-05-13	brotli	A Compression Format Optimized for the Web
2018-05-13	ComICS	Computational Methods for Immune Cell-Type Subsets
2018-05-13	coxme	Mixed Effects Cox Models
2018-05-13	enpls	Ensemble Partial Least Squares Regression
2018-05-13	FastRCS	Fits the FastRCS Robust Multivariable Linear Regression Model
2018-05-13	gamlr	Gamma Lasso Regression
2018-05-13	geoBayes	Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods
2018-05-13	LPGraph	Nonparametric Smoothing of Laplacian Graph Spectra
2018-05-13	mcga	Machine Coded Genetic Algorithms for Real-Valued Optimization Problems
2018-05-13	metamisc	Diagnostic and Prognostic Meta-Analysis
2018-05-13	ndtv	Network Dynamic Temporal Visualizations
2018-05-13	PhenotypeSimulator	Flexible Phenotype Simulation from Different Genetic and Noise Models
2018-05-13	rJPSGCS	R-Interface to Gene Drop Simulation from JPSGCS
2018-05-13	RMySQL	Database Interface and 'MySQL' Driver for R
2018-05-13	RSiena	Siena - Simulation Investigation for Empirical Network Analysis
2018-05-13	sodavis	SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models
2018-05-13	stminsights	A 'Shiny' Application for Inspecting Structural Topic Models
2018-05-13	vitality	Fitting Routines for the Vitality Family of Mortality Models
2018-05-12	mltools	Machine Learning Tools
2018-05-12	pricesensitivitymeter	Van Westendorp Price Sensitivity Meter Analysis
2018-05-12	PSM	Non-Linear Mixed-Effects Modelling using Stochastic Differential Equations
2018-05-12	SSN	Spatial Modeling on Stream Networks
2018-05-12	treeClust	Cluster Distances Through Trees
2018-05-11	ASIP	Automated Satellite Image Processing
2018-05-11	bigchess	Read, Manipulate and Explore Chess PGN Files
2018-05-11	blorr	Tools for Developing Binary Logistic Regression Models
2018-05-11	cld2	Google's Compact Language Detector 2
2018-05-11	CleanBSequences	Clean Biological Sequences
2018-05-11	comperes	Manage Competition Results
2018-05-11	CPP	Composition of Probabilistic Preferences (CPP)
2018-05-11	dartR	Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis
2018-05-11	exams	Automatic Generation of Exams in R
2018-05-11	ExPanDaR	Explore Panel Data Interactively
2018-05-11	GA	Genetic Algorithms
2018-05-11	gbfs	Interface with General Bikeshare Feed Specification Files
2018-05-11	HDclassif	High Dimensional Supervised Classification and Clustering
2018-05-11	Knoema	Interface to the Knoema API
2018-05-11	LPower	Calculates Power, Sample Size, or Detectable Effect for Longitudinal Analyses
2018-05-11	lsmeans	Least-Squares Means
2018-05-11	magick	Advanced Graphics and Image-Processing in R
2018-05-11	MEclustnet	Fitting the Mixture of Experts Latent Position Cluster Model to Network Data
2018-05-11	mgwrsar	GWR and MGWR with Spatial Autocorrelation
2018-05-11	modelr	Modelling Functions that Work with the Pipe
2018-05-11	nVennR	Create n-Dimensional, Quasi-Proportional Venn Diagrams
2018-05-11	Observation	Collect and Process Physical Activity Direct Observation Data
2018-05-11	oec	Observatory of Economic Complexity API Wrapper and Utility Program
2018-05-11	openSTARS	An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
2018-05-11	randquotes	Get Random Quotes from Quotes on Design API
2018-05-11	RcppProgress	An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2018-05-11	REddyProcNCDF	Reading Data from NetCDF Files for 'REddyProc'
2018-05-11	redlistr	Tools for the IUCN Red List of Ecosystems and Species
2018-05-11	SCCS	The Self-Controlled Case Series Method
2018-05-11	SEERaBomb	SEER and Atomic Bomb Survivor Data Analysis Tools
2018-05-11	Select	Determines Species Probabilities Based on Functional Traits
2018-05-11	shiny.semantic	Semantic UI Support for Shiny
2018-05-11	simstudy	Simulation of Study Data
2018-05-11	spFSR	Feature Selection and Ranking by Simultaneous Perturbation Stochastic Approximation
2018-05-11	tiobeindexr	Extract 'TIOBE' Programming Index Tables for the Latest Month
2018-05-10	asympTest	A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples
2018-05-10	Benchmarking	Benchmark and Frontier Analysis Using DEA and SFA
2018-05-10	blandr	Bland-Altman Method Comparison
2018-05-10	childhoodmortality	Calculating Childhood Mortality Rates
2018-05-10	elect	Estimation of Life Expectancies Using Multi-State Models
2018-05-10	epiDisplay	Epidemiological Data Display Package
2018-05-10	groc	Generalized Regression on Orthogonal Components
2018-05-10	ismev	An Introduction to Statistical Modeling of Extreme Values
2018-05-10	mclogit	Mixed Conditional Logit Models
2018-05-10	MVisAGe	Compute and Visualize Bivariate Associations
2018-05-10	nadiv	(Non)Additive Genetic Relatedness Matrices
2018-05-10	pimeta	Prediction Intervals for Random-Effects Meta-Analysis
2018-05-10	QuasiSeq	Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
2018-05-10	quhomology	Calculation of Homology of Quandles, Racks, Biquandles and Biracks
2018-05-10	RcmdrPlugin.HH	Rcmdr Support for the HH Package
2018-05-10	readtext	Import and Handling for Plain and Formatted Text Files
2018-05-10	ROI.plugin.alabama	'alabama' Plug-in for the 'R' Optimization Infrastructure
2018-05-10	rPowerSampleSize	Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate
2018-05-10	rsvg	Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
2018-05-10	seqHMM	Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series
2018-05-10	SGP	Student Growth Percentiles & Percentile Growth Trajectories
2018-05-10	stringr	Simple, Consistent Wrappers for Common String Operations
2018-05-10	TrajDataMining	Trajectories Data Mining
2018-05-10	trajr	Animal Trajectory Analysis
2018-05-10	TRSbook	Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis"
2018-05-10	writexl	Export Data Frames to Excel 'xlsx' Format
2018-05-09	BacArena	Modeling Framework for Cellular Communities in their Environments
2018-05-09	BIEN	Tools for Accessing the Botanical Information and Ecology Network Database
2018-05-09	cati	Community Assembly by Traits: Individuals and Beyond
2018-05-09	dad	Three-Way Data Analysis Through Densities
2018-05-09	deSolve	Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
2018-05-09	dobson	Data from the GLM Book by Dobson and Barnett
2018-05-09	dynamac	Dynamic Simulation and Testing for Single-Equation ARDL Models
2018-05-09	EMSaov	The Analysis of Variance with EMS
2018-05-09	GGMM	Mixture Gaussian Graphical Models
2018-05-09	ggrepel	Automatically Position Non-Overlapping Text Labels with 'ggplot2'
2018-05-09	GRANBase	Creating Continuously Integrated Package Repositories from Manifests
2018-05-09	GRANCore	Classes and Methods for 'GRANBase'
2018-05-09	grf	Generalized Random Forests (Beta)
2018-05-09	island	Stochastic Island Biogeography Theory Made Easy
2018-05-09	metaSEM	Meta-Analysis using Structural Equation Modeling
2018-05-09	qtbase	Interface Between R and 'Qt'
2018-05-09	staplr	A Toolkit for PDF Files
2018-05-09	tidyquant	Tidy Quantitative Financial Analysis
2018-05-09	xyloplot	A Method for Creating Xylophone-Like Frequency Density Plots
2018-05-08	Amelia	A Program for Missing Data
2018-05-08	BatchGetSymbols	Downloads and Organizes Financial Data for Multiple Tickers
2018-05-08	coga	Convolution of Gamma Distributions
2018-05-08	DescriptiveStats.OBeu	Descriptive Statistics 'OpenBudgets.eu'
2018-05-08	FIT	Transcriptomic Dynamics Models in Field Conditions
2018-05-08	fscaret	Automated Feature Selection from 'caret'
2018-05-08	fuzzr	Fuzz-Test R Functions
2018-05-08	gdpc	Generalized Dynamic Principal Components
2018-05-08	isqg	In Silico Quantitative Genetics
2018-05-08	jiebaR	Chinese Text Segmentation
2018-05-08	LeArEst	Border and Area Estimation of Data Measured with Additive Error
2018-05-08	leerSIECyL	Read Data from the SIE
2018-05-08	nandb	Number and Brightness Image Analysis
2018-05-08	phiDelta	Tool for Phi Delta Analysis of Features
2018-05-08	praznik	Collection of Information-Based Feature Selection Filters
2018-05-08	preference	2-Stage Preference Trial Design and Analysis
2018-05-08	PWFSLSmoke	Utilities for Working with Air Quality Monitoring Data
2018-05-08	red	IUCN Redlisting Tools
2018-05-08	rpf	Response Probability Functions
2018-05-08	ruta	Implementation of Unsupervised Neural Architectures
2018-05-08	ScottKnottESD	The Scott-Knott Effect Size Difference (ESD) Test
2018-05-08	statsr	Companion Package for Statistics with R
2018-05-08	stocks	Stock Market Analysis
2018-05-08	survRM2adapt	Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times
2018-05-07	BlockFeST	Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation
2018-05-07	bsts	Bayesian Structural Time Series
2018-05-07	CondIndTests	Nonlinear Conditional Independence Tests
2018-05-07	copBasic	General Bivariate Copula Theory and Many Utility Functions
2018-05-07	CRF	Conditional Random Fields
2018-05-07	CTRE	Thresholding Bursty Time Series
2018-05-07	dlib	Allow Access to the 'Dlib' C++ Library
2018-05-07	earth	Multivariate Adaptive Regression Splines
2018-05-07	EMbC	Expectation-Maximization Binary Clustering
2018-05-07	FlowScreen	Daily Streamflow Trend and Change Point Screening
2018-05-07	FRegSigCom	Functional Regression using Signal Compression Approach
2018-05-07	gdistance	Distances and Routes on Geographical Grids
2018-05-07	ggspectra	Extensions to 'ggplot2' for Radiation Spectra
2018-05-07	grec	GRadient-Based RECognition of Spatial Patterns in Environmental Data
2018-05-07	gWQS	Generalized Weighted Quantile Sum Regression
2018-05-07	IRISSeismic	Classes and Methods for Seismic Data Analysis
2018-05-07	JSM	Semiparametric Joint Modeling of Survival and Longitudinal Data
2018-05-07	lmvar	Linear Regression with Non-Constant Variances
2018-05-07	modeldb	Fits Models Inside the Database
2018-05-07	MPkn	Calculations of One Discrete Model in Several Time Steps
2018-05-07	nardl	Nonlinear Cointegrating Autoregressive Distributed Lag Model
2018-05-07	OscillatorGenerator	Generation of Customizable, Discretized Time Series of Oscillating Species
2018-05-07	oXim	Oxycline Index from Matrix Echograms
2018-05-07	pairwiseCI	Confidence Intervals for Two Sample Comparisons
2018-05-07	rbamtools	Read and Write BAM (Binary Alignment) Files
2018-05-07	RcmdrPlugin.OptimClassifier	Create the Best Train for Classification Models
2018-05-07	rdi	Repertoire Dissimilarity Index
2018-05-07	rijkspalette	Create Colour Palettes Based on Famous Artworks from the Rijksmuseum
2018-05-07	rpanel	Simple Interactive Controls for R using the 'tcltk' Package
2018-05-07	SemiCompRisks	Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data
2018-05-07	sensors4plumes	Test and Optimise Sampling Designs Based on Plume Simulations
2018-05-07	shinytest	Test Shiny Apps
2018-05-07	tuber	Client for the YouTube API
2018-05-07	webr	Data and Functions for Web-Based Analysis
2018-05-07	wrassp	Interface to the 'ASSP' Library
2018-05-06	covsep	Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable
2018-05-06	dbplot	Simplifies Plotting Data Inside Databases
2018-05-06	esc	Effect Size Computation for Meta Analysis
2018-05-06	imagine	IMAGing engINE, Tools for Application of Image Filters to Data Matrices
2018-05-06	JoSAE	Unit-Level and Area-Level Small Area Estimation
2018-05-06	lmeVarComp	Testing for a Subset of Variance Components in Linear Mixed Models
2018-05-06	miceFast	Fast Imputations Using 'Rcpp' and 'Armadillo'
2018-05-06	MOLHD	Multiple Objective Latin Hypercube Design
2018-05-06	optional	Optional Types and Pattern Matching
2018-05-06	pROC	Display and Analyze ROC Curves
2018-05-06	propagate	Propagation of Uncertainty
2018-05-06	psych	Procedures for Psychological, Psychometric, and Personality Research
2018-05-06	RcppMsgPack	'MsgPack' C++ Header Files and Interface Functions for R
2018-05-06	rexpokit	R Wrappers for EXPOKIT; Other Matrix Functions
2018-05-06	RMariaDB	Database Interface and 'MariaDB' Driver
2018-05-06	RPostgres	'Rcpp' Interface to 'PostgreSQL'
2018-05-06	RSQLite	'SQLite' Interface for R
2018-05-06	sm	Smoothing Methods for Nonparametric Regression and Density Estimation
2018-05-06	tidystats	Create a Tidy Statistics Output File
2018-05-06	uncertainty	Uncertainty Estimation and Contribution Analysis
2018-05-05	AssocAFC	Allele Frequency Comparison
2018-05-05	comtradr	Interface with the United Nations Comtrade API
2018-05-05	crsra	Tidying and Analyzing 'Coursera' Research Export Data
2018-05-05	easyPubMed	Search and Retrieve Scientific Publication Records from PubMed
2018-05-05	expoRkit	Expokit in R
2018-05-05	FactoInvestigate	Automatic Description of Factorial Analysis
2018-05-05	oglmx	Estimation of Ordered Generalized Linear Models
2018-05-05	pbdRPC	Programming with Big Data – Remote Procedure Call
2018-05-05	pbdZMQ	Programming with Big Data – Interface to 'ZeroMQ'
2018-05-05	rpms	Recursive Partitioning for Modeling Survey Data
2018-05-04	ameco	European Commission Annual Macro-Economic (AMECO) Database
2018-05-04	bartMachine	Bayesian Additive Regression Trees
2018-05-04	Barycenter	Regularized Wasserstein Distances and Barycenters
2018-05-04	catenary	Fits a Catenary to Given Points
2018-05-04	climatol	Climate Tools (Series Homogenization and Derived Products)
2018-05-04	clinDR	Simulation and Analysis Tools for Clinical Dose Response Modeling
2018-05-04	codemetar	Generate 'CodeMeta' Metadata for R Packages
2018-05-04	DAC	Calculating Data Agreement Criterion Scores to Rank Experts Based on Their Beliefs
2018-05-04	difNLR	DIF and DDF Detection by Non-Linear Regression Models
2018-05-04	enrichwith	Methods to Enrich R Objects with Extra Components
2018-05-04	FactoMineR	Multivariate Exploratory Data Analysis and Data Mining
2018-05-04	filenamer	Easy Management of File Names
2018-05-04	Matching	Multivariate and Propensity Score Matching with Balance Optimization
2018-05-04	matR	Metagenomics Analysis Tools
2018-05-04	MSCMT	Multivariate Synthetic Control Method Using Time Series
2018-05-04	msma	Multiblock Sparse Multivariable Analysis
2018-05-04	olsrr	Tools for Building OLS Regression Models
2018-05-04	ProjectionBasedClustering	Projection Based Clustering
2018-05-04	rgenoud	R Version of GENetic Optimization Using Derivatives
2018-05-04	SanzCircos	Functions for Creating 'Circos' Files
2018-05-04	ShinyItemAnalysis	Test and Item Analysis via Shiny
2018-05-04	spduration	Split-Population Duration (Cure) Regression
2018-05-04	statcheck	Extract Statistics from Articles and Recompute p Values
2018-05-04	states	Create Panels of Independent States
2018-05-04	SurvDisc	Discrete Time Survival and Longitudinal Data Analysis
2018-05-04	TDMR	Tuned Data Mining in R
2018-05-04	treedater	Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation
2018-05-03	aroma.core	Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2018-05-03	beam	Fast Bayesian Inference in Large Gaussian Graphical Models
2018-05-03	clustrd	Methods for Joint Dimension Reduction and Clustering
2018-05-03	cyclestreets	Cycle Routing and Data for Cycling Advocacy
2018-05-03	dataMaid	A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
2018-05-03	dendextend	Extending 'dendrogram' Functionality in R
2018-05-03	ecoval	Procedures for Ecological Assessment of Surface Waters
2018-05-03	elementR	An Framework for Reducing Elemental LAICPMS Data from Solid Structures
2018-05-03	Formula	Extended Model Formulas
2018-05-03	glm.predict	Predicted Values and Discrete Changes for GLM
2018-05-03	gss	General Smoothing Splines
2018-05-03	GWLelast	Geographically Weighted Logistic Elastic Net Regression
2018-05-03	InterpretMSSpectrum	Interpreting High Resolution Mass Spectra
2018-05-03	jsonld	JSON for Linking Data
2018-05-03	overlap	Estimates of Coefficient of Overlapping for Animal Activity Patterns
2018-05-03	palm	Fitting Point Process Models via the Palm Likelihood
2018-05-03	popbio	Construction and Analysis of Matrix Population Models
2018-05-03	psyosphere	Analyse GPS Data
2018-05-03	SBSDiff	Satorra-Bentler Scaled Chi-Squared Difference Test
2018-05-03	sstModel	Swiss Solvency Test (SST) Standard Models
2018-05-03	turboEM	A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms
2018-05-03	weco	Western Electric Company Rules (WECO) for Shewhart Control Chart
2018-05-02	AR	Another Look at the Acceptance-Rejection Method
2018-05-02	aricode	Efficient Computations of Standard Clustering Comparison Measures
2018-05-02	Calculator.LR.FNs	Calculator for LR Fuzzy Numbers
2018-05-02	cattonum	Encode Categorical Features
2018-05-02	DBI	R Database Interface
2018-05-02	DtD	Distance to Default
2018-05-02	eggCounts	Hierarchical Modelling of Faecal Egg Counts
2018-05-02	goodpractice	Advice on R Package Building
2018-05-02	hazer	Identifying Foggy and Cloudy Images by Quantifying Hazeness
2018-05-02	installr	Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)
2018-05-02	intamap	Procedures for Automated Interpolation
2018-05-02	intcensROC	Fast Spline Function Based Constrained Maximum Likelihood Estimator for AUC Estimation of Interval Censored Survival Data
2018-05-02	mizer	Multi-Species sIZE Spectrum Modelling in R
2018-05-02	mrbsizeR	Scale Space Multiresolution Analysis of Random Signals
2018-05-02	paleofire	Analysis of Charcoal Records from the Global Charcoal Database
2018-05-02	phenoCDM	Continuous Development Models for Incremental Time-Series Analysis
2018-05-02	PLMIX	Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings
2018-05-02	PLmixed	Estimate (Generalized) Linear Mixed Models with Factor Structures
2018-05-02	pointblank	Validation of Local and Remote Data Tables
2018-05-02	RAC	R Package for Aqua Culture
2018-05-02	rtika	R Interface to 'Apache Tika'
2018-05-02	userfriendlyscience	Quantitative Analysis Made Accessible
2018-05-02	xplain	Providing Interactive Interpretations and Explanations of Statistical Results
2018-05-01	BinaryEPPM	Mean and Variance Modeling of Binary Data
2018-05-01	brt	Biological Relevance Testing
2018-05-01	CRPClustering	Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy
2018-05-01	crs	Categorical Regression Splines
2018-05-01	daymetr	Interface to the 'Daymet' Web Services
2018-05-01	desc	Manipulate DESCRIPTION Files
2018-05-01	ECctmc	Simulation from Endpoint-Conditioned Continuous Time Markov Chains
2018-05-01	estprod	Estimation of Production Functions
2018-05-01	glmmBUGS	Generalised Linear Mixed Models with BUGS and JAGS
2018-05-01	icesSAG	Stock Assessment Graphs Database Web Services
2018-05-01	IMIFA	Infinite Mixtures of Infinite Factor Analysers and Related Models
2018-05-01	ISOpureR	Deconvolution of Tumour Profiles
2018-05-01	Jdmbs	Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies
2018-05-01	lmSubsets	Exact Variable-Subset Selection in Linear Regression
2018-05-01	MESS	Miscellaneous Esoteric Statistical Scripts
2018-05-01	nprobust	Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
2018-05-01	pivot	'SQL' PIVOT and UNPIVOT
2018-05-01	Rnumerai	Interface to the Numerai Machine Learning Tournament API
2018-05-01	rwunderground	R Interface to Weather Underground API
2018-05-01	sbart	Sequential BART for Imputation of Missing Covariates
2018-05-01	scape	Statistical Catch-at-Age Plotting Environment
2018-05-01	shinystan	Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models
2018-05-01	soiltexture	Functions for Soil Texture Plot, Classification and Transformation
2018-05-01	Sstack	Bootstrap Stacking of Random Forest Models for Heterogeneous Data
2018-05-01	stosim	Stochastic Simulator for Reliability Modeling of Repairable Systems
2018-05-01	UsingR	Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
2018-04-30	BBMV	Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape
2018-04-30	bigIntegerAlgos	R Tool for Factoring Big Integers
2018-04-30	BoomSpikeSlab	MCMC for Spike and Slab Regression
2018-04-30	cbsodataR	Statistics Netherlands (CBS) Open Data API Client
2018-04-30	experiment	R Package for Designing and Analyzing Randomized Experiments
2018-04-30	gamlss.data	GAMLSS Data
2018-04-30	gcmr	Gaussian Copula Marginal Regression
2018-04-30	getlandsat	Get Landsat 8 Data from Amazon Public Data Sets
2018-04-30	ITRSelect	Variable Selection for Optimal Individualized Dynamic Treatment Regime
2018-04-30	jsr223	A 'Java' Platform Integration for 'R' with Programming Languages 'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'), and 'Kotlin'
2018-04-30	LatticeKrig	Multiresolution Kriging Based on Markov Random Fields
2018-04-30	MASS	Support Functions and Datasets for Venables and Ripley's MASS
2018-04-30	mlbgameday	Tools to Gather Data from Major League Baseball Advanced Media (MLBAM)
2018-04-30	npmlreg	Nonparametric Maximum Likelihood Estimation for Random Effect Models
2018-04-30	originr	Fetch Species Origin Data from the Web
2018-04-30	pcIRT	IRT Models for Polytomous and Continuous Item Responses
2018-04-30	pkgnet	Get Network Representation of an R Package
2018-04-30	qte	Quantile Treatment Effects
2018-04-30	quadrupen	Sparsity by Worst-Case Quadratic Penalties
2018-04-30	rcdk	Interface to the 'CDK' Libraries
2018-04-30	RZigZag	Zig-Zag Sampler
2018-04-30	simr	Power Analysis for Generalised Linear Mixed Models by Simulation
2018-04-30	treemapify	Draw Treemaps in 'ggplot2'
2018-04-30	TSP	Traveling Salesperson Problem (TSP)
2018-04-30	vMask	Detect Small Changes in Process Mean using CUSUM Control Chart by v-Mask
2018-04-29	Boom	Bayesian Object Oriented Modeling
2018-04-29	CompGLM	Conway-Maxwell-Poisson GLM and Distribution Functions
2018-04-29	convexjlr	Disciplined Convex Programming in R using 'Convex.jl'
2018-04-29	hyperSMURF	Hyper-Ensemble Smote Undersampled Random Forests
2018-04-29	predtoolsTS	Time Series Prediction Tools
2018-04-29	qrmtools	Tools for Quantitative Risk Management
2018-04-29	Rmalschains	Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R
2018-04-29	robustlmm	Robust Linear Mixed Effects Models
2018-04-29	sqlscore	Utilities for Generating SQL Queries from Model Objects
2018-04-29	tableone	Create 'Table 1' to Describe Baseline Characteristics
2018-04-29	textmineR	Functions for Text Mining and Topic Modeling
2018-04-28	AFM	Atomic Force Microscope Image Analysis
2018-04-28	anesrake	ANES Raking Implementation
2018-04-28	BigQuic	Big Quadratic Inverse Covariance Estimation
2018-04-28	commonmark	High Performance CommonMark and Github Markdown Rendering in R
2018-04-28	packcircles	Circle Packing
2018-04-28	sensR	Thurstonian Models for Sensory Discrimination
2018-04-27	bikedata	Download and Aggregate Data from Public Hire Bicycle Systems
2018-04-27	brainKCCA	Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis
2018-04-27	BreedingSchemeLanguage	Describe and Simulate Breeding Schemes
2018-04-27	diffeqr	Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
2018-04-27	envalysis	Miscellaneous Functions for Environmental Analyses
2018-04-27	foolbox	Function manipulation toolbox
2018-04-27	jmdem	Fitting Joint Mean and Dispersion Effects Models
2018-04-27	jmetrik	Tools for Interacting with 'jMetrik'
2018-04-27	mathpix	Support for the 'Mathpix' API (Image to 'LaTeX')
2018-04-27	mds	Medical Devices Surveillance
2018-04-27	mrgsolve	Simulate from ODE-Based Population PK/PD and Systems Pharmacology Models
2018-04-27	MultiplierDEA	Multiplier Data Envelopment Analysis and Cross Efficiency
2018-04-27	scorecardModelUtils	Credit Scorecard Modelling Utils
2018-04-27	smartsizer	Power Analysis for a SMART Design
2018-04-27	SoilHyP	Soil Hydraulic Properties
2018-04-27	tailr	Automatic Tail Recursion Optimisation
2018-04-27	vdiffr	Visual Regression Testing and Graphical Diffing
2018-04-27	weights	Weighting and Weighted Statistics
2018-04-26	BLSM	Bayesian Latent Space Model
2018-04-26	detpack	Density Estimation and Random Number Generation with Distribution Element Trees
2018-04-26	divest	Get Images Out of DICOM Format Quickly
2018-04-26	efts	High-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF
2018-04-26	FHDI	Fractional Hot Deck and Fully Efficient Fractional Imputation
2018-04-26	ITNr	Analysis of the International Trade Network
2018-04-26	kdtools	Tools for Working with Multidimensional Data
2018-04-26	MixfMRI	Mixture fMRI Clustering Analysis
2018-04-26	pooling	Fit Poolwise Regression Models
2018-04-26	raw	R Actuarial Workshops
2018-04-26	rddapp	Regression Discontinuity Design Application
2018-04-26	shades	Simple Colour Manipulation
2018-04-26	SpatialFloor	Spatial Floor Simulation (Isotropic)
2018-04-26	svDialogs	'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes
2018-04-26	TableMonster	Table Monster
2018-04-26	timechange	Efficient Changing of Date-Times
2018-04-25	base2grob	Convert Base Plot to 'grob' Object
2018-04-25	BCRA	Breast Cancer Risk Assessment
2018-04-25	breathtestcore	Core Functions to Read and Fit 13c Time Series from Breath Tests
2018-04-25	dst	Using Dempster-Shafer Theory
2018-04-25	edpclient	Empirical Data Platform Client
2018-04-25	effectR	Predicts Oomycete Effectors
2018-04-25	egoTERGM	Estimation of Ego-Temporal Exponential Random Graph Models via Expectation Maximization (EM)
2018-04-25	enviGCMS	GC/LC-MS Data Analysis for Environmental Science
2018-04-25	equalCovs	Testing the Equality of Two Covariance Matrices
2018-04-25	evd	Functions for Extreme Value Distributions
2018-04-25	forestmodel	Forest Plots from Regression Models
2018-04-25	gensvm	A Generalized Multiclass Support Vector Machine
2018-04-25	ggquickeda	Quickly Explore Your Data Using 'ggplot2' and Summary Tables
2018-04-25	lavaanPlot	Path Diagrams for Lavaan Models via DiagrammeR
2018-04-25	lvnet	Latent Variable Network Modeling
2018-04-25	ManlyMix	Manly Mixture Modeling and Model-Based Clustering
2018-04-25	MiRKAT	Microbiome Regression-Based Kernel Association Test
2018-04-25	MittagLeffleR	Mittag-Leffler Family of Distributions
2018-04-25	nowcasting	Nowcast Analysis and Create Real-Time Data Basis
2018-04-25	onnx	R Interface to 'ONNX'
2018-04-25	qgraph	Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2018-04-25	RefManageR	Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2018-04-25	SetMethods	Functions for Set-Theoretic Multi-Method Research and Advanced QCA
2018-04-25	shinyLP	Bootstrap Landing Home Pages for Shiny Applications
2018-04-25	SOR	Estimation using Sequential Offsetted Regression
2018-04-25	sourcetools	Tools for Reading, Tokenizing and Parsing R Code
2018-04-25	survivALL	Continuous Biomarker Assessment by Exhaustive Survival Analysis
2018-04-25	svmplus	Implementation of Support Vector Machines Plus (SVM+)
2018-04-25	worms	Retriving Aphia Information from World Register of Marine Species
2018-04-24	archivist	Tools for Storing, Restoring and Searching for R Objects
2018-04-24	arulesViz	Visualizing Association Rules and Frequent Itemsets
2018-04-24	BayesXsrc	R Package Distribution of the BayesX C++ Sources
2018-04-24	bigrquery	An Interface to Google's 'BigQuery' 'API'
2018-04-24	CJAMP	Copula-Based Joint Analysis of Multiple Phenotypes
2018-04-24	cultevo	Tools, Measures and Statistical Tests for Cultural Evolution
2018-04-24	DDD	Diversity-Dependent Diversification
2018-04-24	detrendr	Detrend Images
2018-04-24	dglars	Differential Geometric Least Angle Regression
2018-04-24	EMVS	The Expectation-Maximization Approach to Bayesian Variable Selection
2018-04-24	EpiCurve	Plot an Epidemic Curve
2018-04-24	frambgrowth	Simulation of the Growth of Framboidal and Sunflower Pyrite
2018-04-24	imdbapi	Get Movie, Television Data from the 'imdb' Database
2018-04-24	immer	Item Response Models for Multiple Ratings
2018-04-24	ivtools	Instrumental Variables
2018-04-24	lexicon	Lexicons for Text Analysis
2018-04-24	MARX	Simulation, Estimation, Model Selection and Forecasting for MARX Models
2018-04-24	Morpho	Calculations and Visualisations Related to Geometric Morphometrics
2018-04-24	nmfem	NMF-EM Algorithm
2018-04-24	PieceExpIntensity	Bayesian Model to Find Changepoints Based on Rates and Count Data
2018-04-24	pmultinom	One-Sided Multinomial Probabilities
2018-04-24	ReIns	Functions from "Reinsurance: Actuarial and Statistical Aspects"
2018-04-24	rly	'Lex' and 'Yacc'
2018-04-24	sentimentr	Calculate Text Polarity Sentiment
2018-04-24	sn	The Skew-Normal and Related Distributions Such as the Skew-t
2018-04-24	SNFtool	Similarity Network Fusion
2018-04-24	SourceSet	A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways
2018-04-24	upwaver	Access 'Upwave' API
2018-04-24	VarReg	Semi-Parametric Variance Regression
2018-04-24	water	Actual Evapotranspiration with Energy Balance Models
2018-04-23	ACTCD	Asymptotic Classification Theory for Cognitive Diagnosis
2018-04-23	APML0	Augmented and Penalized Minimization Method L0
2018-04-23	arulesCBA	Classification Based on Association Rules
2018-04-23	BoutrosLab.plotting.general	Create Publication-Quality Plots
2018-04-23	clue	Cluster Ensembles
2018-04-23	CorReg	Linear Regression Based on Linear Structure Between Variables
2018-04-23	cubing	Rubik's Cube Solving
2018-04-23	dcurver	Utility Functions for Davidian Curves
2018-04-23	echor	Access EPA 'ECHO' Data
2018-04-23	fbati	Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
2018-04-23	gdalUtils	Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
2018-04-23	grex	Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
2018-04-23	HRM	High-Dimensional Repeated Measures
2018-04-23	komadown	R Markdown Templates for the 'KOMA-Script' Classes
2018-04-23	leaflet.esri	'ESRI' Bindings for the 'leaflet' Package
2018-04-23	listarrays	A Toolbox for Working with R Arrays in a Functional Programming Style
2018-04-23	lmerTest	Tests in Linear Mixed Effects Models
2018-04-23	nodiv	Compares the Distribution of Sister Clades Through a Phylogeny
2018-04-23	orloca.es	Spanish version of orloca package
2018-04-23	relations	Data Structures and Algorithms for Relations
2018-04-23	reportReg	An Easy Way to Report Regression Analysis
2018-04-23	rpql	Regularized PQL for Joint Selection in GLMMs
2018-04-23	sabre	Spatial Association Between Regionalizations
2018-04-23	semantic.dashboard	Dashboard with Semantic UI Support for 'shiny'
2018-04-23	sigmaNet	Render Graphs Using 'Sigma.js'
2018-04-23	slam	Sparse Lightweight Arrays and Matrices
2018-04-23	spatial.tools	R Functions for Working with Spatial Data
2018-04-23	spBayesSurv	Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2018-04-23	svGUI	SciViews - Manage GUIs in R
2018-04-23	tactile	New and Extended Plots, Methods, and Panel Functions for 'lattice'
2018-04-23	varrank	Heuristics Tools Based on Mutual Information for Variable Ranking
2018-04-23	walkalytics	Interface to the 'Walkalytics' API for Calculating Walking Isochrones
2018-04-22	disclapmix	Discrete Laplace Mixture Inference using the EM Algorithm
2018-04-22	psgp	Projected Spatial Gaussian Process Methods
2018-04-22	R.oo	R Object-Oriented Programming with or without References
2018-04-22	rcube	Simulations and Visualizations of Rubik's Cube (with Mods)
2018-04-22	RSiteCatalyst	R Client for Adobe Analytics API V1.4
2018-04-22	VetResearchLMM	Linear Mixed Models - An Introduction with Applications in Veterinary Research
2018-04-21	amt	Animal Movement Tools
2018-04-21	autoplotly	Automatic Generation of Interactive Visualizations for Statistical Results
2018-04-21	fgui	Function GUI
2018-04-21	Greg	Regression Helper Functions
2018-04-21	kerndwd	Distance Weighted Discrimination (DWD) and Kernel Methods
2018-04-21	leaflet.extras	Extra Functionality for 'leaflet' Package
2018-04-21	orloca	Operations Research LOCational Analysis Models
2018-04-21	s2	Google's S2 Library for Geometry on the Sphere
2018-04-21	smovie	Some Movies to Illustrate Concepts in Statistics
2018-04-21	TSEtools	Download and Manage Data from Tehran Stock Exchange
2018-04-20	alr4	Data to Accompany Applied Linear Regression 4th Edition
2018-04-20	attempt	Easy Condition Handling
2018-04-20	BayesSAE	Bayesian Analysis of Small Area Estimation
2018-04-20	binMto	Many-to-One Comparisons of Proportions
2018-04-20	BSagri	Safety Assessment in Agricultural Field Trials
2018-04-20	C443	See a Forest for the Trees
2018-04-20	corpustools	Managing, Querying and Analyzing Tokenized Text
2018-04-20	ctmcmove	Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
2018-04-20	dissever	Spatial Downscaling using the Dissever Algorithm
2018-04-20	eulerr	Area-Proportional Euler and Venn Diagrams with Circles or Ellipses
2018-04-20	europepmc	R Interface to the Europe PubMed Central RESTful Web Service
2018-04-20	futile.matrix	Random Matrix Generation and Manipulation
2018-04-20	futile.options	Futile Options Management
2018-04-20	gProfileR	Interface to the 'g:Profiler' Toolkit
2018-04-20	ijtiff	TIFF I/O for 'ImageJ' Users
2018-04-20	interflex	Multiplicative Interaction Models Diagnostics and Visualization
2018-04-20	ipumsr	Read 'IPUMS' Extract Files
2018-04-20	mlogit	Multinomial Logit Models
2018-04-20	NetOrigin	Origin Estimation for Propagation Processes on Complex Networks
2018-04-20	pbatR	Pedigree/Family-Based Genetic Association Tests Analysis and Power
2018-04-20	PET	Simulation and Reconstruction of PET Images
2018-04-20	PMA	Penalized Multivariate Analysis
2018-04-20	polywog	Bootstrapped Basis Regression with Oracle Model Selection
2018-04-20	processanimateR	Process Map Token Replay Animation
2018-04-20	ProjectTemplate	Automates the Creation of New Statistical Analysis Projects
2018-04-20	promote	Client for the 'Alteryx Promote' API
2018-04-20	qlcMatrix	Utility Sparse Matrix Functions for Quantitative Language Comparison
2018-04-20	readxl	Read Excel Files
2018-04-20	RealVAMS	Multivariate VAM Fitting
2018-04-20	refuge	Locate Trans and Intersex-Friendly Toilets
2018-04-20	RM.weights	Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood
2018-04-20	semsfa	Semiparametric Estimation of Stochastic Frontier Models
2018-04-20	SPEDInstabR	Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept
2018-04-20	tawny	Clean Covariance Matrices Using Random Matrix Theory and Shrinkage Estimators for Portfolio Optimization
2018-04-20	tawny.types	Common Types for Tawny
2018-04-20	utilsIPEA	IPEA Common Functions
2018-04-20	utiml	Utilities for Multi-Label Learning
2018-04-20	votesys	Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods
2018-04-20	wesanderson	A Wes Anderson Palette Generator
2018-04-20	wiqid	Quick and Dirty Estimates for Wildlife Populations
2018-04-19	AGread	Read Data Files from ActiGraph Monitors
2018-04-19	aire.zmvm	Download Mexico City Pollution, Wind, and Temperature Data
2018-04-19	AMIAS	Alternating Minimization Induced Active Set Algorithms
2018-04-19	BEST	Bayesian Estimation Supersedes the t-Test
2018-04-19	clordr	Composite Likelihood Inference for Spatial Ordinal Data with Replications
2018-04-19	ClusVis	Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering
2018-04-19	coneproj	Primal or Dual Cone Projections with Routines for Constrained Regression
2018-04-19	denseFLMM	Functional Linear Mixed Models for Densely Sampled Data
2018-04-19	FarmSelect	Factor Adjusted Robust Model Selection
2018-04-19	htmlwidgets	HTML Widgets for R
2018-04-19	lsbclust	Least-Squares Bilinear Clustering for Three-Way Data
2018-04-19	lspartition	Nonparametric Estimation and Inference Procedures using Partitioning-Based Least Squares Regression
2018-04-19	Matrix.utils	Data.frame-Like Operations on Sparse and Dense Matrix Objects
2018-04-19	mschart	Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents
2018-04-19	profileR	Profile Analysis of Multivariate Data in R
2018-04-19	riskRegression	Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks
2018-04-19	smerc	Statistical Methods for Regional Counts
2018-04-19	SwarmSVM	Ensemble Learning Algorithms Based on Support Vector Machines
2018-04-18	arc	Association Rule Classification
2018-04-18	BASiNET	Classification of RNA Sequences using Complex Network Theory
2018-04-18	cptcity	'cpt-city' Colour Gradients
2018-04-18	deBInfer	Bayesian Inference for Differential Equations
2018-04-18	dirichletprocess	Build Dirichlet Process Objects for Bayesian Modelling
2018-04-18	dockerfiler	Easy Dockerfile Creation from R
2018-04-18	DrInsight	Drug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data
2018-04-18	DynamicGP	Local Gaussian Process Model for Large-Scale Dynamic Computer Experiments
2018-04-18	esmprep	Data Preparation During and After the Use of the Experience Sampling Methodology (ESM)
2018-04-18	GPvam	Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2018-04-18	HiCblock	Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
2018-04-18	HiCfeat	Multiple Logistic Regression for 3D Chromatin Domain Border Analysis
2018-04-18	HiCglmi	Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms
2018-04-18	MFDFA	MultiFractal Detrended Fluctuation Analysis
2018-04-18	nLTT	Calculate the NLTT Statistic
2018-04-18	pedantics	Functions to Facilitate Power and Sensitivity Analyses for Genetic Studies of Natural Populations
2018-04-18	prodlim	Product-Limit Estimation for Censored Event History Analysis
2018-04-18	rbraries	Interface to the 'Libraries.io' API
2018-04-18	stampr	Spatial Temporal Analysis of Moving Polygons
2018-04-18	thgenetics	Genetic Rare Variants Tests
2018-04-18	TP.idm	Estimation of Transition Probabilities for the Illness-Death Model
2018-04-18	UniDOE	Uniform Design of Experiments
2018-04-18	WhiteStripe	White Matter Normalization for Magnetic Resonance Images using WhiteStripe
2018-04-17	anomalize	Tidy Anomaly Detection
2018-04-17	bioOED	Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
2018-04-17	bioset	Convert a Matrix of Raw Values into Nice and Tidy Data
2018-04-17	caper	Comparative Analyses of Phylogenetics and Evolution in R
2018-04-17	CARBayesST	Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2018-04-17	coxphw	Weighted Estimation in Cox Regression
2018-04-17	DJL	Distance Measure Based Judgment and Learning
2018-04-17	genderBR	Predict Gender from Brazilian First Names
2018-04-17	HIBPwned	Bindings for the 'HaveIBeenPwned.com' Data Breach API
2018-04-17	JMbayes	Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2018-04-17	ltm	Latent Trait Models under IRT
2018-04-17	ncvreg	Regularization Paths for SCAD and MCP Penalized Regression Models
2018-04-17	Publish	Format Output of Various Routines in a Suitable Way for Reports and Publication
2018-04-17	qwraps2	Quick Wraps 2
2018-04-17	rvertnet	Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2018-04-17	Rvmmin	Variable Metric Nonlinear Function Minimization
2018-04-17	SI	Stochastic Integrating
2018-04-17	uncmbb	UNC Men's Basketball Match Results Since 1949-1950 Season
2018-04-17	vcfR	Manipulate and Visualize VCF Data
2018-04-16	apaText	Create R Markdown Text for Results in the Style of the American Psychological Association (APA)
2018-04-16	aroma.affymetrix	Analysis of Large Affymetrix Microarray Data Sets
2018-04-16	batch	Batching Routines in Parallel and Passing Command-Line Arguments to R
2018-04-16	behavr	Canonical Data Structure for Behavioural Data
2018-04-16	bisect	Estimating Cell Type Composition from Methylation Sequencing Data
2018-04-16	brglm2	Bias Reduction in Generalized Linear Models
2018-04-16	CBDA	Compressive Big Data Analytics
2018-04-16	classiFunc	Classification of Functional Data
2018-04-16	classInt	Choose Univariate Class Intervals
2018-04-16	cond	Approximate Conditional Inference for Logistic and Loglinear Models
2018-04-16	corehunter	Multi-Purpose Core Subset Selection
2018-04-16	csampling	Functions for Conditional Simulation in Regression-Scale Models
2018-04-16	cvcrand	Efficient Design and Analysis of Cluster Randomized Trials
2018-04-16	effectsizescr	Indices for Single-Case Research
2018-04-16	envirem	Generation of ENVIREM Variables
2018-04-16	JM	Joint Modeling of Longitudinal and Survival Data
2018-04-16	loggle	Local Group Graphical Lasso Estimation
2018-04-16	marg	Approximate Marginal Inference for Regression-Scale Models
2018-04-16	MVR	Mean-Variance Regularization
2018-04-16	newTestSurvRec	Statistical Tests to Compare Curves with Recurrent Events
2018-04-16	NightDay	Night and Day Boundary Plot Function
2018-04-16	nlreg	Higher Order Inference for Nonlinear Heteroscedastic Models
2018-04-16	PCICt	Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars
2018-04-16	projpred	Projection Predictive Feature Selection
2018-04-16	riingo	An R Interface to the 'Tiingo' Stock Price API
2018-04-16	RJDBC	Provides Access to Databases Through the JDBC Interface
2018-04-16	rnr	Rosenbaum and Rubin Sensitivity
2018-04-16	SemiPar	Semiparametic Regression
2018-04-16	sGMRFmix	Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection
2018-04-16	SimRepeat	Simulation of Correlated Systems of Equations with Multiple Variable Types
2018-04-16	WebPower	Basic and Advanced Statistical Power Analysis
2018-04-15	idbr	R Interface to the US Census Bureau International Data Base API
2018-04-15	meltt	Matching Event Data by Location, Time and Type
2018-04-15	mexhaz	Mixed Effect Excess Hazard Models
2018-04-15	rbacon	Age-Depth Modelling using Bayesian Statistics
2018-04-15	sglg	Fitting Semi-Parametric Generalized log-Gamma Regression Models
2018-04-15	SixSigma	Six Sigma Tools for Quality Control and Improvement
2018-04-15	vistime	Pretty Timeline Creation
2018-04-14	CensMixReg	Censored Linear Mixture Regression Models
2018-04-14	foghorn	Summarize CRAN Check Results in the Terminal
2018-04-14	influence.SEM	Case Influence in Structural Equation Models
2018-04-14	MARSS	Multivariate Autoregressive State-Space Modeling
2018-04-14	mlegp	Maximum Likelihood Estimates of Gaussian Processes
2018-04-14	Rprofet	WOE Transformation and Scorecard Builder
2018-04-14	tigris	Load Census TIGER/Line Shapefiles
2018-04-14	yesno	Ask Yes-No Questions
2018-04-13	arm	Data Analysis Using Regression and Multilevel/Hierarchical Models
2018-04-13	bamlss	Bayesian Additive Models for Location Scale and Shape (and Beyond)
2018-04-13	clhs	Conditioned Latin Hypercube Sampling
2018-04-13	clinfun	Clinical Trial Design and Data Analysis Functions
2018-04-13	cutpointr	Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks
2018-04-13	DBHC	Sequence Clustering with Discrete-Output HMMs
2018-04-13	fpp2	Data for "Forecasting: Principles and Practice" (2nd Edition)
2018-04-13	gldrm	Generalized Linear Density Ratio Models
2018-04-13	GraphPCA	Graphical Tools of Histogram PCA
2018-04-13	gscounts	Group Sequential Designs with Negative Binomial Outcomes
2018-04-13	hydrolinks	Hydrologic Network Linking Data and Tools
2018-04-13	komaletter	Simple yet Flexible Letters via the 'KOMA-Script LaTeX Bundle'
2018-04-13	kst	Knowledge Space Theory
2018-04-13	LogConcDEAD	Log-Concave Density Estimation in Arbitrary Dimensions
2018-04-13	lolR	Linear Optimal Low-Rank Projection
2018-04-13	lqmm	Linear Quantile Mixed Models
2018-04-13	mcmcr	Manipulate MCMC Samples
2018-04-13	mgc	Multiscale Graph Correlation
2018-04-13	MixSIAR	Bayesian Mixing Models in R
2018-04-13	mlvocab	Vocabulary and Corpus Preprocessing for Natural Language Pipelines
2018-04-13	monkeylearn	Accesses the Monkeylearn API for Text Classifiers and Extractors
2018-04-13	MultiVarSel	Variable Selection in a Multivariate Linear Model
2018-04-13	nlirms	Non-Life Insurance Rate-Making System
2018-04-13	nna	Nearest-Neighbor Analysis
2018-04-13	promises	Abstractions for Promise-Based Asynchronous Programming
2018-04-13	Qtools	Utilities for Quantiles
2018-04-13	quantmod	Quantitative Financial Modelling Framework
2018-04-13	RMCriteria	Multicriteria Package
2018-04-13	rnrfa	UK National River Flow Archive Data from R
2018-04-13	rstanarm	Bayesian Applied Regression Modeling via Stan
2018-04-13	salesforcer	An Implementation of 'Salesforce' APIs Using Tidy Principles
2018-04-13	sdat	Signal Detection via Adaptive Test
2018-04-13	StMoMo	Stochastic Mortality Modelling
2018-04-13	survtmle	Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings
2018-04-13	tsensembler	Dynamic Ensembles for Time Series Forecasting
2018-04-13	waveband	Computes Credible Intervals for Bayesian Wavelet Shrinkage
2018-04-12	aMNLFA	Automated Fitting of Moderated Nonlinear Factor Analysis Through the 'Mplus' Program
2018-04-12	aqp	Algorithms for Quantitative Pedology
2018-04-12	aws.comprehend	'AWS Comprehend' Client Package
2018-04-12	aws.translate	Client for 'AWS Translate'
2018-04-12	bayesammi	Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model
2018-04-12	bayesmeta	Bayesian Random-Effects Meta-Analysis
2018-04-12	CCM	Correlation Classification Method
2018-04-12	cem	Coarsened Exact Matching
2018-04-12	gimmeTools	Supplemental Tools for the 'gimme' R Package
2018-04-12	hR	An HR Analytics Toolkit
2018-04-12	idem	Inference in Randomized Controlled Trials with Death and Missingness
2018-04-12	indirect	Elicitation of Independent Conditional Means Priors for Generalised Linear Models
2018-04-12	jose	JavaScript Object Signing and Encryption
2018-04-12	labstatR	Libreria Del Laboratorio Di Statistica Con R
2018-04-12	marmap	Import, Plot and Analyze Bathymetric and Topographic Data
2018-04-12	minval	MINimal VALidation for Stoichiometric Reactions
2018-04-12	msigdbr	MSigDB for Multiple Organisms in a Tidy Data Format
2018-04-12	phyreg	The Phylogenetic Regression of Grafen (1989)
2018-04-12	PowerTOST	Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2018-04-12	PreciseSums	Accurate Floating Point Sums and Products
2018-04-12	rtip	Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data
2018-04-12	sokoban	Sokoban Game
2018-04-12	spc	Statistical Process Control – Calculation of ARL and Other Control Chart Performance Measures
2018-04-12	stratifyR	Optimal Stratification of Univariate Populations
2018-04-12	xROI	Delinate Region of Interests (ROI's) and Extract Time-Series Data from Digital Repeat Photography Images
2018-04-11	bioimagetools	Tools for Microscopy Imaging
2018-04-11	di	Deficit Index (DI)
2018-04-11	emuR	Main Package of the EMU Speech Database Management System
2018-04-11	FindIt	Finding Heterogeneous Treatment Effects
2018-04-11	GroupSeq	A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2018-04-11	haplo.stats	Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
2018-04-11	irrNA	Coefficients of Interrater Reliability - Generalized for Randomly Incomplete Datasets
2018-04-11	loo	Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2018-04-11	lubridate	Make Dealing with Dates a Little Easier
2018-04-11	MIRL	Multiple Imputation Random Lasso for Variable Selection with Missing Entries
2018-04-11	personalized	Estimation and Validation Methods for Subgroup Identification and Personalized Medicine
2018-04-11	rbison	Interface to the 'USGS' 'BISON' 'API'
2018-04-11	Rmpi	Interface (Wrapper) to MPI (Message-Passing Interface)
2018-04-11	RSurvey	Geographic Information System Application
2018-04-11	sgmcmc	Stochastic Gradient Markov Chain Monte Carlo
2018-04-11	snpReady	Preparing Genotypic Datasets in Order to Run Genomic Analysis
2018-04-11	sparsepca	Sparse Principal Component Analysis (SPCA)
2018-04-11	splitFeas	Multi-Set Split Feasibility
2018-04-11	Thresher	Threshing and Reaping for Principal Components
2018-04-11	webdriver	'WebDriver' Client for 'PhantomJS'
2018-04-10	BOIN	Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
2018-04-10	EpiModel	Mathematical Modeling of Infectious Disease Dynamics
2018-04-10	fasta	Fast Adaptive Shrinkage/Thresholding Algorithm
2018-04-10	FeatureHashing	Creates a Model Matrix via Feature Hashing with a Formula Interface
2018-04-10	fluoSurv	Estimate Insect Survival from Fluorescence Data
2018-04-10	glmmsr	Fit a Generalized Linear Mixed Model
2018-04-10	GLMsData	Generalized Linear Model Data Sets
2018-04-10	landsepi	Landscape Epidemiology and Evolution
2018-04-10	malariaAtlas	An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atlas Project'
2018-04-10	MarginalMediation	Marginal Mediation
2018-04-10	mcglm	Multivariate Covariance Generalized Linear Models
2018-04-10	mispr	Multiple Imputation with Sequential Penalized Regression
2018-04-10	mknapsack	Multiple Knapsack Problem Solver
2018-04-10	multisensi	Multivariate Sensitivity Analysis
2018-04-10	mycor	Automatic Correlation and Regression Test in a 'data.frame'
2018-04-10	nmw	Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics
2018-04-10	rapidjsonr	'Rapidjson' C++ Header Files
2018-04-10	RNGforGPD	Random Number Generation for Generalized Poisson Distributions
2018-04-10	RSAlgaeR	Builds Empirical Remote Sensing Models of Water Quality Variables and Analyzes Long-Term Trends
2018-04-10	scriptName	Determine a Script's Filename from Within the Script Itself
2018-04-10	SGPdata	Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses
2018-04-10	swmmr	R Interface for US EPA's SWMM
2018-04-10	VSURF	Variable Selection Using Random Forests
2018-04-10	WDI	World Development Indicators (World Bank)
2018-04-09	AnnotationBustR	Extract Subsequences from GenBank Annotations
2018-04-09	aws.transcribe	Client for 'AWS Transcribe'
2018-04-09	cluster	"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2018-04-09	clustvarsel	Variable Selection for Gaussian Model-Based Clustering
2018-04-09	essHist	The Essential Histogram
2018-04-09	esvis	Visualization and Estimation of Effect Sizes
2018-04-09	IGG	Inverse Gamma-Gamma
2018-04-09	kdecopula	Kernel Smoothing for Bivariate Copula Densities
2018-04-09	LexisNexisTools	Working with Files from 'LexisNexis'
2018-04-09	loggit	Effortless Exception Logging
2018-04-09	lsm	Estimation of the log Likelihood of the Saturated Model
2018-04-09	mapmisc	Utilities for Producing Maps
2018-04-09	MargCond	Joint Marginal-Conditional Model
2018-04-09	Matrix	Sparse and Dense Matrix Classes and Methods
2018-04-09	MBSP	Multivariate Bayesian Model with Shrinkage Priors
2018-04-09	mcca	Multi-Category Classification Accuracy
2018-04-09	mclcar	Estimating Conditional Auto-Regressive (CAR) Models using Monte Carlo Likelihood Methods
2018-04-09	mstate	Data Preparation, Estimation and Prediction in Multi-State Models
2018-04-09	MultiVarMI	Multiple Imputation for Multivariate Data
2018-04-09	mvPot	Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events
2018-04-09	OptimClassifier	Create the Best Train for Classification Models
2018-04-09	PlackettLuce	Plackett-Luce Models for Rankings
2018-04-09	R.filesets	Easy Handling of and Access to Files Organized in Structured Directories
2018-04-09	rdfp	An Implementation of the 'DoubleClick for Publishers' API
2018-04-09	rfm	Recency, Frequency and Monetary Value Analysis
2018-04-09	RiverBuilder	River Generation for Given Data Sets
2018-04-09	RXshrink	Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
2018-04-09	SentimentAnalysis	Dictionary-Based Sentiment Analysis
2018-04-09	shuffleCI	Confidence Intervals Compared via Shuffling
2018-04-09	spc4sts	Statistical Process Control for Stochastic Textured Surfaces
2018-04-09	textstem	Tools for Stemming and Lemmatizing Text
2018-04-09	wooldridge	111 Data Sets from "Introductory Econometrics: A Modern Approach, 6e" by Jeffrey M. Wooldridge
2018-04-08	amelie	Anomaly Detection with Normal Probability Functions
2018-04-08	equate	Observed-Score Linking and Equating
2018-04-08	ggconf	Simpler Appearance Modification of 'ggplot2'
2018-04-08	liureg	Liu Regression with Liu Biasing Parameters and Statistics
2018-04-08	lmSupport	Support for Linear Models
2018-04-08	meme	Create Meme
2018-04-08	MixAll	Clustering and Classification using Model-Based Mixture Models
2018-04-08	nlnet	Nonlinear Network Reconstruction, Clustering, and Variable Selection Based on DCOL (Distance Based on Conditional Ordered List)
2018-04-08	proxy	Distance and Similarity Measures
2018-04-08	rankdist	Distance Based Ranking Models
2018-04-08	ReinforcementLearning	Model-Free Reinforcement Learning
2018-04-08	tint	'tint' is not 'Tufte'
2018-04-07	arules	Mining Association Rules and Frequent Itemsets
2018-04-07	bnpmr	Bayesian Monotonic Nonparametric Regression
2018-04-07	nlme	Linear and Nonlinear Mixed Effects Models
2018-04-07	streamMOA	Interface for MOA Stream Clustering Algorithms
2018-04-07	webchem	Chemical Information from the Web
2018-04-07	zoib	Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression
2018-04-06	accelmissing	Missing Value Imputation for Accelerometer Data
2018-04-06	alfred	Downloading Time Series from ALFRED Database for Various Vintages
2018-04-06	Anthropometry	Statistical Methods for Anthropometric Data
2018-04-06	ARTP	Gene and Pathway p-Values Computed using the Adaptive Rank Truncated Product
2018-04-06	BayesRS	Bayes Factors for Hierarchical Linear Models with Continuous Predictors
2018-04-06	bsplinePsd	Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
2018-04-06	costat	Time Series Costationarity Determination
2018-04-06	CustomerScoringMetrics	Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers
2018-04-06	dggridR	Discrete Global Grids
2018-04-06	eply	Apply a Function Over Expressions
2018-04-06	featurefinder	Feature Finder
2018-04-06	flam	Fits Piecewise Constant Models with Data-Adaptive Knots
2018-04-06	flexmet	Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model
2018-04-06	gapfill	Fill Missing Values in Satellite Data
2018-04-06	gmfd	Inference and Clustering of Functional Data
2018-04-06	hbmem	Hierarchical Bayesian Analysis of Recognition Memory
2018-04-06	konfound	Quantify the Robustness of Causal Inferences
2018-04-06	mdsOpt	Searching for Optimal MDS Procedure for Metric and Interval-Valued Symbolic Data
2018-04-06	MHTcop	Tests Controlling the FDR / FWER under Certain Copula Models
2018-04-06	MplusAutomation	An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus
2018-04-06	mueRelativeRisk	Relative Risk Based on the Ratio of Median Unbiased Estimates
2018-04-06	RRphylo	Phylogenetic Ridge Regression Methods for Comparative Studies
2018-04-06	rtop	Interpolation of Data with Variable Spatial Support
2018-04-06	RWildbook	Interface for the 'Wildbook' Wildlife Data Management Framework
2018-04-06	selectr	Translate CSS Selectors to XPath Expressions
2018-04-06	stepR	Multiscale Change-Point Inference
2018-04-06	treeman	Phylogenetic Tree Manipulation Class and Methods
2018-04-05	ade4	Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
2018-04-05	adegraphics	An S4 Lattice-Based Package for the Representation of Multivariate Data
2018-04-05	ANOVA.TFNs	One-Way Analysis of Variance Based on Triangular Fuzzy Numbers
2018-04-05	autoFRK	Automatic Fixed Rank Kriging
2018-04-05	BayesESS	Determining Effective Sample Size
2018-04-05	bsplus	Adds Functionality to the R Markdown + Shiny Bootstrap Framework
2018-04-05	CISE	Common and Individual Structure Explained for Multiple Graphs
2018-04-05	corrDNA	Finding Associations in Position-Wise Aligned DNA Sequence Dataset
2018-04-05	DTDA.ni	Doubly Truncated Data Analysis, Non Iterative
2018-04-05	DTRlearn	Learning Algorithms for Dynamic Treatment Regimes
2018-04-05	GAMens	Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification
2018-04-05	ggridges	Ridgeline Plots in 'ggplot2'
2018-04-05	irtDemo	Item Response Theory Demo Collection
2018-04-05	IsoriX	Isoscape Computation and Inference of Spatial Origins using Mixed Models
2018-04-05	KarsTS	An Interface for Microclimate Time Series
2018-04-05	kernplus	A Kernel Regression-Based Multidimensional Wind Turbine Power Curve
2018-04-05	nonmem2R	Loading NONMEM Output Files and Simulate with Parameter Uncertainty
2018-04-05	numbersBR	Validate, Compare and Format Identification Numbers from Brazil
2018-04-05	pbdSLAP	Programming with Big Data – Scalable Linear Algebra Packages
2018-04-05	prepplot	Prepare Figure Region for Base Graphics
2018-04-05	qtlhot	Inference for QTL Hotspots
2018-04-05	qtlnet	Causal Inference of QTL Networks
2018-04-05	RcmdrPlugin.EZR	R Commander Plug-in for the EZR (Easy R) Package
2018-04-05	SnakesAndLaddersAnalysis	Play and Analyse the Game of Snakes and Ladders
2018-04-05	subplex	Unconstrained Optimization using the Subplex Algorithm
2018-04-05	SurfaceTortoise	Find Optimal Sampling Locations Based on Spatial Covariate(s)
2018-04-05	TVsMiss	Variable Selection for Missing Data
2018-04-05	x3ptools	Tools for Working with 3D Surface Measurements
2018-04-05	XLConnect	Excel Connector for R
2018-04-05	XLConnectJars	JAR Dependencies for the XLConnect Package
2018-04-04	ape	Analyses of Phylogenetics and Evolution
2018-04-04	apTreeshape	Analyses of Phylogenetic Treeshape
2018-04-04	bigKRLS	Optimized Kernel Regularized Least Squares
2018-04-04	cosa	Constrained Optimal Sample Allocation
2018-04-04	data.world	Functions and Add-Ins for Working with 'data.world' Data Sets and Projects
2018-04-04	EffectStars	Visualization of Categorical Response Models
2018-04-04	EffectStars2	Effect Stars
2018-04-04	factorMerger	The Merging Path Plot
2018-04-04	fbar	An Extensible Approach to Flux Balance Analysis
2018-04-04	ForestTools	Analyzing Remotely Sensed Forest Data
2018-04-04	ggExtra	Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2018-04-04	HistData	Data Sets from the History of Statistics and Data Visualization
2018-04-04	humanize	Create Values for Human Consumption
2018-04-04	Infusion	Inference Using Simulation
2018-04-04	lmtest	Testing Linear Regression Models
2018-04-04	matlib	Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics
2018-04-04	meteoForecast	Numerical Weather Predictions
2018-04-04	powerbydesign	Power Estimates for ANOVA Designs
2018-04-04	scagnostics	Compute scagnostics - scatterplot diagnostics
2018-04-04	smoothr	Smooth and Tidy Spatial Features
2018-04-04	systemfit	Estimating Systems of Simultaneous Equations
2018-04-03	APfun	Geo-Processing Helper Functions
2018-04-03	archiDART	Plant Root System Architecture Analysis Using DART and RSML Files
2018-04-03	bio3d	Biological Structure Analysis
2018-04-03	CollessLike	Distribution and Percentile of Sackin, Cophenetic and Colless-Like Balance Indices of Phylogenetic Trees
2018-04-03	desplot	Plotting Field Plans for Agricultural Experiments
2018-04-03	EMMIXgene	A Mixture Model-Based Approach to the Clustering of Microarray Expression Data
2018-04-03	epidata	Tools to Retrieve Economic Policy Institute Data Library Extracts
2018-04-03	fmsb	Functions for Medical Statistics Book with some Demographic Data
2018-04-03	gridGraphics	Redraw Base Graphics Using 'grid' Graphics
2018-04-03	heplots	Visualizing Hypothesis Tests in Multivariate Linear Models
2018-04-03	maps	Draw Geographical Maps
2018-04-03	MortalityTables	A Framework for Various Types of Mortality / Life Tables
2018-04-03	NLMR	Simulating Neutral Landscape Models
2018-04-03	panelvar	Panel Vector Autoregression
2018-04-03	pollstR	Client for the HuffPost Pollster API
2018-04-03	Power2Stage	Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2018-04-03	rmapshaper	Client for 'mapshaper' for 'Geospatial' Operations
2018-04-03	rotl	Interface to the 'Open Tree of Life' API
2018-04-03	RSCABS	Rao-Scott Cochran-Armitage by Slices Trend Test
2018-04-03	SSrat	Two-Dimensional Sociometric Status Determination with Rating Scales
2018-04-03	toxplot	Batch Processing, Modeling and Visualizing the Dose-Response of High-Throughput Screening Bioassay
2018-04-03	UncertainInterval	Uncertain Interval Methods for Cut-Point Determination in Tests
2018-04-02	Bivariate.Pareto	Bivariate Pareto Models
2018-04-02	colorSpec	Color Calculations with Emphasis on Spectral Data
2018-04-02	CORElearn	Classification, Regression and Feature Evaluation
2018-04-02	dfoptim	Derivative-Free Optimization
2018-04-02	GFGM.copula	Generalized Farlie-Gumbel-Morgenstern Copula
2018-04-02	glmnet	Lasso and Elastic-Net Regularized Generalized Linear Models
2018-04-02	gstat	Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2018-04-02	negenes	Estimating the Number of Essential Genes in a Genome
2018-04-02	network	Classes for Relational Data
2018-04-02	SpatMCA	Regularized Spatial Maximum Covariance Analysis
2018-04-02	usfertilizer	County-Level Estimates of Fertilizer Application in USA
2018-04-01	AssetPricing	Optimal Pricing of Assets with Fixed Expiry Date
2018-04-01	deldir	Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2018-04-01	gamsel	Fit Regularization Path for Generalized Additive Models
2018-04-01	gb	Generalize Lambda Distribution and Generalized Bootstrapping
2018-04-01	geecure	Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations
2018-04-01	ICSShiny	ICS via a Shiny Application
2018-04-01	metaplus	Robust Meta-Analysis and Meta-Regression
2018-04-01	rGroovy	Groovy Language Integration
2018-04-01	sparseFLMM	Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data
2018-03-31	cvequality	Tests for the Equality of Coefficients of Variation from Multiple Groups
2018-03-31	growfunctions	Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data
2018-03-31	shazam	Immunoglobulin Somatic Hypermutation Analysis
2018-03-30	ads	Spatial Point Patterns Analysis
2018-03-30	alakazam	Immunoglobulin Clonal Lineage and Diversity Analysis
2018-03-30	comorbidity	Computing Comorbidity Scores
2018-03-30	errorlocate	Locate Errors with Validation Rules
2018-03-30	geojsonio	Convert Data from and to 'GeoJSON' or 'TopoJSON'
2018-03-30	inegiR	Integrate INEGI’s (Mexican Stats Office) API with R
2018-03-30	learningCurve	An Implementation of Crawford's and Wright's Learning Curve Production Functions
2018-03-30	mapdata	Extra Map Databases
2018-03-30	marked	Mark-Recapture Analysis for Survival and Abundance Estimation
2018-03-30	mixreg	Functions to Fit Mixtures of Regressions
2018-03-30	mstR	Procedures to Generate Patterns under Multistage Testing
2018-03-30	normalr	Normalisation of Multiple Variables in Large-Scale Datasets
2018-03-30	radiomics	'Radiomic' Image Processing Toolbox
2018-03-30	spcosa	Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2018-03-29	basefun	Infrastructure for Computing with Basis Functions
2018-03-29	bindrcpp	An 'Rcpp' Interface to Active Bindings
2018-03-29	elasticsearchr	A Lightweight Interface for Interacting with Elasticsearch from R
2018-03-29	geofacet	'ggplot2' Faceting Utilities for Geographical Data
2018-03-29	jdx	'Java' Data Exchange for 'R' and 'rJava'
2018-03-29	lcyanalysis	Stock Data Analysis Functions
2018-03-29	LSAfun	Applied Latent Semantic Analysis (LSA) Functions
2018-03-29	LTRCtrees	Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data
2018-03-29	mapproj	Map Projections
2018-03-29	merDeriv	Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
2018-03-29	microdemic	'Microsoft Academic' API Client
2018-03-29	nmathresh	Thresholds and Invariant Intervals for Network Meta-Analysis
2018-03-29	nonmemica	Create and Evaluate NONMEM Models in a Project Context
2018-03-29	parsec	Partial Orders in Socio-Economics
2018-03-29	phantom	Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data
2018-03-29	rio	A Swiss-Army Knife for Data I/O
2018-03-29	RQDA	Qualitative Data Analysis
2018-03-29	SeqKat	Detection of Kataegis
2018-03-29	TipDatingBeast	Using Tip Dates with Phylogenetic Trees in BEAST (Software for Phylogenetic Analysis)
2018-03-29	tokenizers	Fast, Consistent Tokenization of Natural Language Text
2018-03-29	USAboundaries	Historical and Contemporary Boundaries of the United States of America
2018-03-29	viridis	Default Color Maps from 'matplotlib'
2018-03-29	wellknown	Convert Between 'WKT' and 'GeoJSON'
2018-03-28	carData	Companion to Applied Regression Data Sets
2018-03-28	curl	A Modern and Flexible Web Client for R
2018-03-28	encode	Represent Ordered Lists and Pairs as Strings
2018-03-28	EpiILMCT	Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
2018-03-28	InjurySeverityScore	Translate ICD-9 into Injury Severity Score
2018-03-28	landscapetools	Landscape Utility Toolbox
2018-03-28	Phase123	Simulating and Conducting Phase 123 Trials
2018-03-28	postGIStools	Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases
2018-03-28	productivity	Indices of Productivity Using Data Envelopment Analysis (DEA)
2018-03-28	rgl	3D Visualization Using OpenGL
2018-03-28	SubTite	Subgroup Specific Optimal Dose Assignment
2018-03-28	tidyLPA	Easily Carry Out Latent Profile Analysis
2018-03-28	VennDiagram	Generate High-Resolution Venn and Euler Plots
2018-03-27	ARHT	Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data
2018-03-27	aws.alexa	Client for the Amazon Alexa Web Information Services API
2018-03-27	bairt	Bayesian Analysis of Item Response Theory Models
2018-03-27	Bolstad	Functions for Elementary Bayesian Inference
2018-03-27	config	Manage Environment Specific Configuration Values
2018-03-27	constellation	Identify Event Sequences Using Time Series Joins
2018-03-27	dfmeta	Meta-Analysis of Phase I Dose-Finding Early Clinical Trials
2018-03-27	dfped	Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
2018-03-27	dynprog	Dynamic Programming Domain-Specific Language
2018-03-27	ggdag	Analyze and Create Elegant Directed Acyclic Graphs
2018-03-27	PWEALL	Design and Monitoring of Survival Trials Accounting for Complex Situations
2018-03-27	RobustGaSP	Robust Gaussian Stochastic Process Emulation
2018-03-27	saeRobust	Robust Small Area Estimation
2018-03-27	semPower	Power Analyses for SEM
2018-03-27	shinycustomloader	Custom Loader for Shiny Outputs
2018-03-27	spaceNet	Latent Space Models for Multidimensional Networks
2018-03-27	sparseHessianFD	Numerical Estimation of Sparse Hessians
2018-03-27	sperrorest	Perform Spatial Error Estimation and Variable Importance in Parallel
2018-03-27	ssc	Semi-Supervised Classification Methods
2018-03-27	trustOptim	Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2018-03-27	tsfknn	Time Series Forecasting Using Nearest Neighbors
2018-03-27	validatetools	Checking and Simplifying Validation Rule Sets
2018-03-26	BoltzMM	Boltzmann Machines with MM Algorithms
2018-03-26	datr	'Dat' Protocol Interface
2018-03-26	degreenet	Models for Skewed Count Distributions Relevant to Networks
2018-03-26	embryogrowth	Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2018-03-26	fdANOVA	Analysis of Variance for Univariate and Multivariate Functional Data
2018-03-26	hts	Hierarchical and Grouped Time Series
2018-03-26	listviewer	'htmlwidget' for Interactive Views of R Lists
2018-03-26	oem	Orthogonalizing EM: Penalized Regression for Big Tall Data
2018-03-26	phenomap	Projecting Satellite-Derived Phenology in Space
2018-03-26	PwrGSD	Power in a Group Sequential Design
2018-03-26	quotedargs	A Way of Writing Functions that Quote their Arguments
2018-03-26	ramps	Bayesian Geostatistical Modeling with RAMPS
2018-03-26	ri2	Randomization Inference for Randomized Experiments
2018-03-26	simTool	Conduct Simulation Studies with a Minimal Amount of Source Code
2018-03-26	sparseMVN	Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2018-03-26	vennLasso	Variable Selection for Heterogeneous Populations
2018-03-25	berryFunctions	Function Collection Related to Plotting and Hydrology
2018-03-25	blob	A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
2018-03-25	flare	Family of Lasso Regression
2018-03-25	glmmML	Generalized Linear Models with Clustering
2018-03-25	interp	Interpolation Methods
2018-03-25	mefa4	Multivariate Data Handling with S4 Classes and Sparse Matrices
2018-03-25	orthoDr	An Orthogonality Constrained Optimization Approach for Semi-Parametric Dimension Reduction Problems
2018-03-25	plogr	The 'plog' C++ Logging Library
2018-03-25	randomForest	Breiman and Cutler's Random Forests for Classification and Regression
2018-03-25	symbolicDA	Analysis of Symbolic Data
2018-03-25	tabuSearch	Tabu Search Algorithm for Binary Configurations
2018-03-25	tmle	Targeted Maximum Likelihood Estimation
2018-03-25	windfarmGA	Genetic Algorithm for Wind Farm Layout Optimization
2018-03-24	DMRnet	Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
2018-03-24	LNIRT	LogNormal Response Time Item Response Theory Models
2018-03-23	boxoffice	Downloads Box Office Information for Given Dates
2018-03-23	BSL	Bayesian Synthetic Likelihood with Graphical Lasso
2018-03-23	CoordinateCleaner	Automated Cleaning of Occurrence Records from Biological Collections
2018-03-23	diagmeta	Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints
2018-03-23	fcros	A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2018-03-23	fmlogcondens	Fast Multivariate Log-Concave Density Estimation
2018-03-23	h2o4gpu	Interface to 'H2O4GPU'
2018-03-23	ioncopy	Calling Copy Number Alterations in Amplicon Sequencing Data
2018-03-23	itcSegment	Individual Tree Crowns Segmentation
2018-03-23	lineup	Lining Up Two Sets of Measurements
2018-03-23	MetabolomicsBasics	Basic Functions to Investigate Metabolomics Data Matrices
2018-03-23	miLineage	Association Tests for Microbial Lineages on a Taxonomic Tree
2018-03-23	netmeta	Network Meta-Analysis using Frequentist Methods
2018-03-23	NormalizeMets	Analysis of Metabolomics Data
2018-03-23	polySegratioMM	Bayesian Mixture Models for Marker Dosage in Autopolyploids
2018-03-23	Rclean	A Tool for Writing Cleaner, more Transparent Code
2018-03-23	rglobi	R Interface to Global Biotic Interactions
2018-03-23	RunuranGUI	A GUI for the UNU.RAN Random Variate Generators
2018-03-23	sfdct	Constrained Triangulation for Simple Features
2018-03-23	STV	Single Transferable Vote Counting
2018-03-23	swagger	Dynamically Generates Documentation from a 'Swagger' Compliant API
2018-03-23	SYNCSA	Analysis of Functional and Phylogenetic Patterns in Metacommunities
2018-03-23	ZIBBSeqDiscovery	Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data
2018-03-22	BMA	Bayesian Model Averaging
2018-03-22	dispRity	Measuring Disparity
2018-03-22	DPWeibull	Dirichlet Process Weibull Mixture Model for Survival Data
2018-03-22	eaf	Plots of the Empirical Attainment Function
2018-03-22	ensembleMOS	Ensemble Model Output Statistics
2018-03-22	fasterize	Fast Polygon to Raster Conversion
2018-03-22	GPGame	Solving Complex Game Problems using Gaussian Processes
2018-03-22	hsm	A Path-Based BCD for Proximal Function of Latent Group Lasso
2018-03-22	KappaGUI	An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
2018-03-22	MCPAN	Multiple Comparisons Using Normal Approximation
2018-03-22	MED	Mediation by Tilted Balancing
2018-03-22	Momocs	Morphometrics using R
2018-03-22	multilevelPSA	Multilevel Propensity Score Analysis
2018-03-22	nhanesA	NHANES Data Retrieval
2018-03-22	pmatch	Pattern Matching
2018-03-22	polySegratio	Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids
2018-03-22	R3port	Report Functions to Create HTML and PDF Files
2018-03-22	rreg	Visualization for Norwegian Health Quality Registries
2018-03-22	SetTest	Group Testing Procedures for Signal Detection and Goodness-of-Fit
2018-03-22	SympluR	Analyze Healthcare Social Media Data from the 'Symplur' API
2018-03-21	AdapSamp	Adaptive Sampling Algorithms
2018-03-21	AnthropMMD	An R-Shiny Application for Smith's Mean Measure of Divergence (MMD)
2018-03-21	CholWishart	Cholesky Decomposition of the Wishart Distribution
2018-03-21	crqanlp	Cross-Recurrence Quantification Analysis for Dynamic Natural Language Processing
2018-03-21	fclust	Fuzzy Clustering
2018-03-21	horserule	Flexible Non-Linear Regression with the HorseRule Algorithm
2018-03-21	incR	Analysis of Incubation Data
2018-03-21	koRpus.lang.en	Language Support for 'koRpus' Package: English
2018-03-21	mapr	Visualize Species Occurrence Data
2018-03-21	measurements	Tools for Units of Measurement
2018-03-21	NEArender	Network Enrichment Analysis
2018-03-21	nlr	Nonlinear Regression Modelling using Robust Methods
2018-03-21	NOAAWeather	Get Weather Data from NOAA Weather Stations
2018-03-21	purging	Simple Method for Purging Mediation Effects among Independent Variables
2018-03-21	rforensicbatwing	BATWING for Calculating Forensic Trace-Suspect Match Probabilities
2018-03-21	Ricetl	Data Extraction for People's Republic of China Resident Identity Card
2018-03-21	rjazz	Official Client for 'Jazz'
2018-03-21	RNRCS	Download NRCS Data
2018-03-21	shinydashboard	Create Dashboards with 'Shiny'
2018-03-21	SPINA	Structure Parameter Inference Approach
2018-03-21	spls	Sparse Partial Least Squares (SPLS) Regression and Classification
2018-03-21	TFisher	Optimal Thresholding Fisher's P-Value Combination Method
2018-03-20	benthos	Marine Benthic Ecosystem Analysis
2018-03-20	catdap	Categorical Data Analysis Program Package
2018-03-20	ciuupi	Confidence Intervals Utilizing Uncertain Prior Information
2018-03-20	descriptr	Generate Descriptive Statistics & Explore Statistical Distributions
2018-03-20	doBy	Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
2018-03-20	document	Run 'roxygen2' on (Chunks of) Single Code Files
2018-03-20	eventdataR	Event Data Repository
2018-03-20	evir	Extreme Values in R
2018-03-20	fastmaRching	Fast Marching Method for Modelling Evolving Boundaries
2018-03-20	fsthet	Fst-Heterozygosity Smoothed Quantiles
2018-03-20	genlogis	Generalized Logistic Distribution
2018-03-20	grImport2	Importing 'SVG' Graphics
2018-03-20	HistDAWass	Histogram-Valued Data Analysis
2018-03-20	multipol	Multivariate Polynomials
2018-03-20	Oarray	Arrays with Arbitrary Offsets
2018-03-20	PHYLOGR	Functions for Phylogenetically Based Statistical Analyses
2018-03-20	PrivateLR	Differentially Private Regularized Logistic Regression
2018-03-20	rarhsmm	Regularized Autoregressive Hidden Semi Markov Model
2018-03-20	rmeta	Meta-Analysis
2018-03-20	SpatialPack	Tools for Assessment the Association Between Two Spatial Processes
2018-03-20	spnn	Scale Invariant Probabilistic Neural Networks
2018-03-20	Tmisc	Turner Miscellaneous
2018-03-20	VWPre	Tools for Preprocessing Visual World Data
2018-03-19	actuar	Actuarial Functions and Heavy Tailed Distributions
2018-03-19	CIEE	Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
2018-03-19	cotrend	Consistant Cotrend Rank Selection
2018-03-19	dbmss	Distance-Based Measures of Spatial Structures
2018-03-19	DGVM3D	3D Forest Simulation Visualization Tool
2018-03-19	dyn	Time Series Regression
2018-03-19	gamRR	Calculate the RR for the GAM
2018-03-19	klaR	Classification and Visualization
2018-03-19	metScanR	Find, Map, and Gather Environmental Data and Metadata
2018-03-19	mixedsde	Estimation Methods for Stochastic Differential Mixed Effects Models
2018-03-19	NScluster	Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2018-03-19	polyglot	Learn Foreign Language Vocabulary
2018-03-19	ppsbm	Clustering in Longitudinal Networks
2018-03-19	RNAsmc	RNA Secondary Structure Module Mining, Comparison and Plotting
2018-03-19	ROlogit	Fit Rank-Ordered Logit (RO-Logit) Model
2018-03-19	RSSampling	Ranked Set Sampling
2018-03-19	sylly.en	Language Support for 'sylly' Package: English
2018-03-19	TreeSearch	Phylogenetic Tree Search Using Custom Optimality Criteria
2018-03-19	TwoRegression	Process Data from Wearable Research Devices Using Two-Regression Algorithms
2018-03-19	untb	Ecological Drift under the UNTB
2018-03-18	bcgam	Bayesian Constrained Generalised Linear Models
2018-03-18	denstrip	Density Strips and Other Methods for Compactly Illustrating Distributions
2018-03-18	g2f	Find and Fill Gaps in Metabolic Networks
2018-03-18	hierNet	A Lasso for Hierarchical Interactions
2018-03-18	LearnBayes	Functions for Learning Bayesian Inference
2018-03-18	longclust	Model-Based Clustering and Classification for Longitudinal Data
2018-03-18	msme	Functions and Datasets for "Methods of Statistical Model Estimation"
2018-03-18	pgmm	Parsimonious Gaussian Mixture Models
2018-03-18	QuantTools	Enhanced Quantitative Trading Modelling
2018-03-18	RcppSMC	Rcpp Bindings for Sequential Monte Carlo
2018-03-18	Rgb	The R Genome Browser
2018-03-18	Rgretl	Interface to 'gretlcli'
2018-03-18	rts	Raster Time Series Analysis
2018-03-18	smatr	(Standardised) Major Axis Estimation and Testing Routines
2018-03-18	WaveletComp	Computational Wavelet Analysis
2018-03-18	XR	A Structure for Interfaces from R
2018-03-18	XRJulia	Structured Interface to Julia
2018-03-17	cRegulome	Obtain and Visualize Regulome-Gene Expression Correlations in Cancer
2018-03-17	datetime	Nominal Dates, Times, and Durations
2018-03-17	dispmod	Modelling Dispersion in GLM
2018-03-17	OPDOE	Optimal Design of Experiments
2018-03-17	orclus	Subspace Clustering Based on Arbitrarily Oriented Projected Cluster Generation
2018-03-17	popdemo	Demographic Modelling Using Projection Matrices
2018-03-17	rootWishart	Distribution of Largest Root for Single and Double Wishart Settings
2018-03-17	splithalf	Calculate Task Split Half Reliability Estimates
2018-03-17	survidm	Inference and Prediction in an Illness-Death Model
2018-03-17	tree	Classification and Regression Trees
2018-03-17	wpp2017	World Population Prospects 2017
2018-03-16	bayesPop	Probabilistic Population Projection
2018-03-16	beast	Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
2018-03-16	deltaPlotR	Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method
2018-03-16	diffractometry	Baseline Identification and Peak Decomposition for x-Ray Diffractograms
2018-03-16	EthSEQ	Ethnicity Annotation from Whole Exome Sequencing Data
2018-03-16	fitPoly	Genotype Calling for Bi-Allelic Marker Assays
2018-03-16	glogis	Fitting and Testing Generalized Logistic Distributions
2018-03-16	gsubfn	Utilities for Strings and Function Arguments
2018-03-16	lfactors	Factors with Levels
2018-03-16	MCDA	Functions to Support the Multicriteria Decision Aiding Process
2018-03-16	metaviz	Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis
2018-03-16	mlbstats	Major League Baseball Player Statistics Calculator
2018-03-16	MonteCarlo	Automatic Parallelized Monte Carlo Simulations
2018-03-16	NetworkExtinction	Extinction Simulation in Food Webs
2018-03-16	petitr	Relative Growth Rate
2018-03-16	qle	Simulation-Based Quasi-Likelihood Estimation
2018-03-16	QRegVCM	Quantile Regression in Varying-Coefficient Models
2018-03-16	rMEA	Synchrony in Motion Energy Analysis (MEA) Time-Series
2018-03-16	sparsebnUtils	Utilities for Learning Sparse Bayesian Networks
2018-03-16	sphet	Estimation of Spatial Autoregressive Models with and without Heteroscedasticity
2018-03-16	synbreed	Framework for the Analysis of Genomic Prediction Data using R
2018-03-16	tractor.base	Read, Manipulate and Visualise Magnetic Resonance Images
2018-03-15	esaps	Indicators of Electoral Systems and Party Systems
2018-03-15	gmm	Generalized Method of Moments and Generalized Empirical Likelihood
2018-03-15	gSeg	Graph-Based Change-Point Detection (g-Segmentation)
2018-03-15	paramGUI	A Shiny GUI for some Parameter Estimation Examples
2018-03-15	pastecs	Package for Analysis of Space-Time Ecological Series
2018-03-15	PPCI	Projection Pursuit for Cluster Identification
2018-03-15	RcppClassicExamples	Examples using 'RcppClassic' to Interface R and C++
2018-03-15	RDieHarder	R Interface to the 'DieHarder' RNG Test Suite
2018-03-15	rdlocrand	Local Randomization Methods for RD Designs
2018-03-15	wheatmap	Incrementally Build Complex Plots using Natural Semantics
2018-03-15	withr	Run Code 'With' Temporarily Modified Global State
2018-03-14	adaptiveGPCA	Adaptive Generalized PCA
2018-03-14	AmigaFFH	Commodore Amiga File Format Handler
2018-03-14	bcmaps	Map Layers and Spatial Utilities for British Columbia
2018-03-14	corregp	Functions and Methods for Correspondence Regression
2018-03-14	CoxPhLb	Analyzing Right-Censored Length-Biased Data
2018-03-14	funnelR	Funnel Plots for Proportion Data
2018-03-14	genogeographer	Methods for Analysing Forensic Ancestry Informative Markers
2018-03-14	gfmR	Implements Group Fused Multinomial Regression
2018-03-14	ggQQunif	Compare Big Datasets to the Uniform Distribution
2018-03-14	gim	Generalized Integration Model
2018-03-14	higrad	Statistical Inference for Online Learning and Stochastic Approximation via HiGrad
2018-03-14	hmmm	Hierarchical Multinomial Marginal Models
2018-03-14	maxadjAUC	Maximizing the Adjusted AUC
2018-03-14	ordinalRR	Analysis of Repeatability and Reproducibility Studies with Ordinal Measurements
2018-03-14	patentsview	An R Client to the 'PatentsView' API
2018-03-14	pmxTools	Pharmacometric and Pharmacokinetic Toolkit
2018-03-14	poolfstat	Computing F-Statistics from Pool-Seq Data
2018-03-14	pyinit	Pena-Yohai Initial Estimator for Robust S-Regression
2018-03-14	RH2	DBI/RJDBC Interface to H2 Database
2018-03-14	ridittools	Useful Functions for Ridit Analysis
2018-03-14	rLakeAnalyzer	Lake Physics Tools
2018-03-14	scatterplot3d	3D Scatter Plot
2018-03-14	SensMixed	Analysis of Sensory and Consumer Data in a Mixed Model Framework
2018-03-14	tidyboot	Tidyverse-Compatible Bootstrapping
2018-03-14	vstsr	Access to Visual Studio Team Services API via R
2018-03-14	wordbankr	Accessing the Wordbank Database
2018-03-14	WufooR	R Wrapper for the 'Wufoo.com' - The Form Building Service
2018-03-14	zipfextR	Zipf Extended Distributions
2018-03-13	abnormality	Measure a Subject's Abnormality with Respect to a Reference Population
2018-03-13	AnglerCreelSurveySimulation	Simulate a Bus Route Creel Survey of Anglers
2018-03-13	assignPOP	Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
2018-03-13	baystability	Bayesian Stability Analysis of Genotype by Environment Interaction (GEI)
2018-03-13	bindr	Parametrized Active Bindings
2018-03-13	BKPC	Bayesian Kernel Projection Classifier
2018-03-13	crmPack	Object-Oriented Implementation of CRM Designs
2018-03-13	define	Create FDA-Style Data and Program Definitions
2018-03-13	Dominance	A Package to Calculate and Visualize Dominance Hierarchies
2018-03-13	fcr	Functional Concurrent Regression for Sparse Data
2018-03-13	findR	Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching
2018-03-13	genBart	Generate 'BART' File
2018-03-13	Modelcharts	Classification Model Charts
2018-03-13	readit	Effortlessly Read Any Rectangular Data
2018-03-13	RM2006	RiskMetrics 2006 Methodology
2018-03-13	survey	Analysis of Complex Survey Samples
2018-03-13	winRatioAnalysis	Estimates the Win-Ratio as a Function of Time
2018-03-13	ZeBook	Working with Dynamic Models for Agriculture and Environment
2018-03-12	bdots	Bootstrapped Differences of Time Series
2018-03-12	inTrees	Interpret Tree Ensembles
2018-03-12	osrm	Interface Between R and the OpenStreetMap-Based Routing Service OSRM
2018-03-12	pacotest	Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas
2018-03-12	pgirmess	Spatial Analysis and Data Mining for Field Ecologists
2018-03-12	ruv	Detect and Remove Unwanted Variation using Negative Controls
2018-03-12	stranger	Simple Toolkit in R for ANomalies Get, Explain and Report
2018-03-12	sunburstR	'Htmlwidget' for 'Kerry Rodden' 'd3.js' Sequence Sunburst
2018-03-12	TimeVTree	Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach
2018-03-12	xtractomatic	Accessing Environmental Data from ERD's ERDDAP Server
2018-03-11	aniDom	Inferring Dominance Hierarchies and Estimating Uncertainty
2018-03-11	cmm	Categorical Marginal Models
2018-03-11	gfer	Green Finance and Environmental Risk
2018-03-11	LMest	Latent Markov Models with and without Covariates
2018-03-11	pense	Penalized Elastic Net S/MM-Estimator of Regression
2018-03-11	widyr	Widen, Process, then Re-Tidy Data
2018-03-10	datetimeutils	Utilities for Dates and Times
2018-03-10	DescToolsAddIns	Some Functions to be Used as Shortcuts in 'RStudio'
2018-03-10	dma	Dynamic Model Averaging
2018-03-10	hms	Pretty Time of Day
2018-03-10	ICSNP	Tools for Multivariate Nonparametrics
2018-03-10	PoisNonNor	Simultaneous Generation of Count and Continuous Data
2018-03-10	properties	Parse 'Java' Properties Files for 'R Service Bus' Applications
2018-03-10	Rcriticor	Pierre-Goldwin Correlogram
2018-03-10	relaimpo	Relative Importance of Regressors in Linear Models
2018-03-10	revtools	Tools to Support Evidence Synthesis
2018-03-10	rmonad	A Monadic Pipeline System
2018-03-10	scatterD3	D3 JavaScript Scatterplot from R
2018-03-10	sim1000G	Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes
2018-03-10	tmod	Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
2018-03-09	beadplexr	Analysis of Multiplex Cytometric Bead Assays
2018-03-09	circglmbayes	Bayesian Analysis of a Circular GLM
2018-03-09	cronR	Schedule R Scripts and Processes with the 'cron' Job Scheduler
2018-03-09	EpiILM	Spatial and Network Based Individual Level Models for Epidemics
2018-03-09	FASeg	Joint Segmentation of Correlated Time Series
2018-03-09	febr	Free Brazilian Repository for Open Soil Data
2018-03-09	glm.deploy	'C' and 'Java' Source Code Generator for Fitted Glm Objects
2018-03-09	IDetect	Isolate-Detect Methodology for Multiple Change-Point Detection
2018-03-09	joineRmeta	Joint Modelling for Meta-Analytic (Multi-Study) Data
2018-03-09	micompr	Multivariate Independent Comparison of Observations
2018-03-09	PP3	Three-Dimensional Exploratory Projection Pursuit
2018-03-09	rdflib	Tools to Manipulate and Query Semantic Data
2018-03-09	rsconnect	Deployment Interface for R Markdown Documents and Shiny Applications
2018-03-09	wgeesel	Weighted Generalized Estimating Equations and Model Selection
2018-03-08	lime	Local Interpretable Model-Agnostic Explanations
2018-03-08	lmomco	L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions
2018-03-08	mgsub	Safe, Multiple, Simultaneous String Substitution
2018-03-08	mma	Multiple Mediation Analysis
2018-03-08	PartCensReg	Estimation and Diagnostics for Partially Linear Censored Regression Models Based on Heavy-Tailed Distributions
2018-03-08	treatSens	Sensitivity Analysis for Causal Inference
2018-03-08	variables	Variable Descriptions
2018-03-08	xoi	Tools for Analyzing Crossover Interference
2018-03-08	xpose4	Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2018-03-07	anomalyDetection	Implementation of Augmented Network Log Anomaly Detection Procedures
2018-03-07	bife	Binary Choice Models with Fixed Effects
2018-03-07	gender	Predict Gender from Names Using Historical Data
2018-03-07	LSRS	Land Surface Remote Sensing
2018-03-07	mvmeta	Multivariate and Univariate Meta-Analysis and Meta-Regression
2018-03-07	ppcSpatial	Spatial Analysis of Pakistan Population Census
2018-03-07	rodeo	A Code Generator for ODE-Based Models
2018-03-07	SCRT	Single-Case Randomization Tests
2018-03-06	ACMEeqtl	Estimation of Interpretable eQTL Effect Sizes Using a Log of Linear Model
2018-03-06	ahp	Analytic Hierarchy Process
2018-03-06	chandwich	Chandler-Bate Sandwich Loglikelihood Adjustment
2018-03-06	edfReader	Reading EDF(+) and BDF(+) Files
2018-03-06	ETAS	Modeling Earthquake Data Using ETAS Model
2018-03-06	HIMA	High-Dimensional Mediation Analysis
2018-03-06	ILS	Interlaboratory Study
2018-03-06	KraljicMatrix	A Quantified Implementation of the Kraljic Matrix
2018-03-06	nls.multstart	Robust Non-Linear Regression using AIC Scores
2018-03-06	NMF	Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
2018-03-06	origami	Generalized Framework for Cross-Validation
2018-03-06	outbreaker2	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2018-03-06	PAC	Partition-Assisted Clustering and Multiple Alignments of Networks
2018-03-06	partialAR	Partial Autoregression
2018-03-06	partialCI	Partial Cointegration
2018-03-06	QuantNorm	Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection
2018-03-06	Rdimtools	Dimension Reduction and Estimation Methods
2018-03-06	robets	Forecasting Time Series with Robust Exponential Smoothing
2018-03-06	slickR	Create Interactive Carousels with the JavaScript 'Slick' Library
2018-03-06	spatialEco	Spatial Analysis and Modelling Utilities
2018-03-06	textfeatures	Extracts Features from Text
2018-03-06	timsac	Time Series Analysis and Control Package
2018-03-06	vlad	Variable Life Adjusted Display
2018-03-05	adfExplorer	Import from and Export to Amiga Disk Files
2018-03-05	AMModels	Adaptive Management Model Manager
2018-03-05	caRamel	Automatic Calibration by Evolutionary Multi Objective Algorithm
2018-03-05	cdfquantreg	Quantile Regression for Random Variables on the Unit Interval
2018-03-05	DAP	Discriminant Analysis via Projections
2018-03-05	ecospace	Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
2018-03-05	elections	USA Presidential Elections Data
2018-03-05	forestr	Ecosystem and Canopy Structural Complexity Metrics from LiDAR
2018-03-05	funrar	Functional Rarity Indices Computation
2018-03-05	gepaf	Google Encoded Polyline Algorithm Format
2018-03-05	itunesr	Access iTunes App Store Ratings and Reviews using R
2018-03-05	matrixTests	Fast Statistical Hypothesis Tests on Rows and Columns of Matrices
2018-03-05	miceExt	Extension Package to 'mice'
2018-03-05	ndjson	Wicked-Fast Streaming 'JSON' ('ndjson') Reader
2018-03-05	NormExpression	Normalize Gene Expression Data using Evaluated Methods
2018-03-05	pbm	Protein Binding Models
2018-03-05	qdapDictionaries	Dictionaries and Word Lists for the 'qdap' Package
2018-03-05	rentrez	'Entrez' in R
2018-03-05	rgr	Applied Geochemistry EDA
2018-03-05	Rsomoclu	Somoclu
2018-03-05	rtkore	'STK++' Core Library Integration to 'R' using 'Rcpp'
2018-03-05	sfsmisc	Utilities from 'Seminar fuer Statistik' ETH Zurich
2018-03-05	soundecology	Soundscape Ecology
2018-03-05	tidyimpute	Imputation the Tidyverse Way
2018-03-05	vowels	Vowel Manipulation, Normalization, and Plotting
2018-03-03	adeba	Adaptive Density Estimation by Bayesian Averaging
2018-03-03	bartMachineJARs	bartMachine JARs
2018-03-03	coxphf	Cox Regression with Firth's Penalized Likelihood
2018-03-03	enc	Portable Tools for 'UTF-8' Character Data
2018-03-03	hansard	Provides Easy Downloading Capabilities for the UK Parliament API
2018-03-03	highfrequency	Tools for Highfrequency Data Analysis
2018-03-03	ICS	Tools for Exploring Multivariate Data via ICS/ICA
2018-03-03	JFE	A Menu-Driven GUI for Analyzing and Modelling Data of Just Finance and Econometrics
2018-03-03	MendelianRandomization	Mendelian Randomization Package
2018-03-03	MNM	Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
2018-03-03	pocrm	Dose Finding in Drug Combination Phase I Trials Using PO-CRM
2018-03-03	pwr	Basic Functions for Power Analysis
2018-03-03	RcmdrPlugin.aRnova	R Commander Plug-in for Repeated-Measures ANOVA
2018-03-03	regsem	Regularized Structural Equation Modeling
2018-03-03	shiftR	Fast Enrichment Analysis via Circular Permutations
2018-03-03	tmcn	A Text Mining Toolkit for Chinese
2018-03-02	acs	Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census
2018-03-02	comato	Analysis of Concept Maps and Concept Landscapes
2018-03-02	fuzzyjoin	Join Tables Together on Inexact Matching
2018-03-02	JADE	Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2018-03-02	LDRTools	Tools for Linear Dimension Reduction
2018-03-02	OpenML	Open Machine Learning and Open Data Platform
2018-03-02	PerformanceAnalytics	Econometric Tools for Performance and Risk Analysis
2018-03-02	rbiouml	Interact with BioUML Server
2018-03-02	rpostgisLT	Managing Animal Movement Data with 'PostGIS' and R
2018-03-02	seewave	Sound Analysis and Synthesis
2018-03-02	wmwpow	Power Calculations for Two-Sample Wilcoxon-Mann-Whitney Test
2018-03-01	ashr	Methods for Adaptive Shrinkage, using Empirical Bayes
2018-03-01	binneR	Spectral Processing for High Resolution Flow Infusion Mass Spectrometry
2018-03-01	DiagrammeR	Graph/Network Visualization
2018-03-01	DoE.MIParray	Creation of Arrays by Mixed Integer Programming
2018-03-01	eixport	Export Emissions to Atmospheric Models
2018-03-01	FactoClass	Combination of Factorial Methods and Cluster Analysis
2018-03-01	fauxpas	HTTP Error Helpers
2018-03-01	formula.tools	Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
2018-03-01	FusionLearn	Fusion Learning
2018-03-01	gWidgetsRGtk2	Toolkit Implementation of gWidgets for RGtk2
2018-03-01	ipwErrorY	Inverse Probability Weighting Estimation of Average Treatment Effect with Outcome Misclassification
2018-03-01	linearQ	Linear Algorithm for Simulating Quantiles in Multiscale Change-Point Segmentation Problem
2018-03-01	loon	Interactive Statistical Data Visualization
2018-03-01	SCperf	Functions for Planning and Managing Inventories in a Supply Chain
2018-03-01	tensorBSS	Blind Source Separation Methods for Tensor-Valued Observations
2018-03-01	TrafficBDE	Traffic Status Prediction in Urban Places using Neural Network Models
2018-03-01	TTAinterfaceTrendAnalysis	Temporal Trend Analysis Graphical Interface
2018-02-28	GetITRData	Reading Financial Reports from Bovespa's ITR System
2018-02-28	ldhmm	Hidden Markov Model for Financial Time-Series Based on Lambda Distribution
2018-02-28	rmcorr	Repeated Measures Correlation
2018-02-28	ropenaq	Accesses Air Quality Data from the Open Data Platform OpenAQ
2018-02-28	SpatEntropy	Spatial Entropy Measures
2018-02-27	bpnreg	Bayesian Projected Normal Regression Models for Circular Data
2018-02-27	cpt	Classification Permutation Test
2018-02-27	depend.truncation	Statistical Methods for the Analysis of Dependently Truncated Data
2018-02-27	filematrix	File-Backed Matrix Class with Convenient Read and Write Access
2018-02-27	fitODBOD	Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
2018-02-27	gdtools	Utilities for Graphical Rendering
2018-02-27	icRSF	A Modified Random Survival Forest Algorithm
2018-02-27	idmTPreg	Regression Model for Progressive Illness Death Data
2018-02-27	kdensity	Kernel Density Estimation with Parametric Starts and Asymmetric Kernels
2018-02-27	lori	Low-Rank Interaction Contingency Tables
2018-02-27	photobiologySun	Data for Sunlight Spectra
2018-02-27	projector	Project Dense Vectors Representation of Texts on a 2D Plan
2018-02-27	truncnorm	Truncated Normal Distribution
2018-02-27	WGCNA	Weighted Correlation Network Analysis
2018-02-27	worldmet	Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD)
2018-02-27	Zelig	Everyone's Statistical Software
2018-02-27	zenplots	Zigzag Expanded Navigation Plots
2018-02-26	Ac3net	Inferring Directional Conservative Causal Core Gene Networks
2018-02-26	carSurv	Correlation-Adjusted Regression Survival (CARS) Scores
2018-02-26	dclone	Data Cloning and MCMC Tools for Maximum Likelihood Methods
2018-02-26	DirectEffects	Estimating Controlled Direct Effects for Explaining Causal Findings
2018-02-26	fuzzywuzzyR	Fuzzy String Matching
2018-02-26	KGode	Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations
2018-02-26	mctest	Multicollinearity Diagnostic Measures
2018-02-26	mmcm	Modified Maximum Contrast Method
2018-02-26	onlineVAR	Online Fitting of Time-Adaptive Lasso Vector Auto Regression
2018-02-26	particles	A Graph Based Particle Simulator Based on D3-Force
2018-02-26	ph2bayes	Bayesian Single-Arm Phase II Designs
2018-02-26	photobiologyLamps	Spectral Irradiance Data for Lamps
2018-02-26	photobiologySensors	Spectral Response Data for Light Sensors
2018-02-26	PK	Basic Non-Compartmental Pharmacokinetics
2018-02-26	pollen	Analysis of Aerobiological Data
2018-02-26	rospca	Robust Sparse PCA using the ROSPCA Algorithm
2018-02-26	SASxport	Read and Write 'SAS' 'XPORT' Files
2018-02-26	SVMMaj	Implementation of the SVM-Maj Algorithm
2018-02-26	tidyselect	Select from a Set of Strings
2018-02-26	TSVC	Tree-Structured Modelling of Varying Coefficients
2018-02-26	visreg	Visualization of Regression Models
2018-02-25	EDMeasure	Energy-Based Dependence Measures
2018-02-25	fdapace	Functional Data Analysis and Empirical Dynamics
2018-02-25	nzpullover	Driving Offences in New Zealand Between 2009 and 2016
2018-02-25	Rcssplot	Styling of Graphics using Cascading Style Sheets
2018-02-25	rpgm	Fast Simulation of Normal/Exponential Random Variables and Stochastic Differential Equations / Poisson Processes
2018-02-25	stoRy	Functions for the Analysis of Star Trek Thematic Data
2018-02-25	tidypredict	Run Predictions Inside the Database
2018-02-24	coloc	Colocalisation Tests of Two Genetic Traits
2018-02-24	iClick	A Button-Based GUI for Financial and Economic Data Analysis
2018-02-23	assertr	Assertive Programming for R Analysis Pipelines
2018-02-23	bea.R	Bureau of Economic Analysis API
2018-02-23	clespr	Composite Likelihood Estimation for Spatial Data
2018-02-23	CPBayes	Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
2018-02-23	dynamo	Fit a Stochastic Dynamical Array Model to Array Data
2018-02-23	intamapInteractive	Interactive Add-on Functionality for 'intamap'
2018-02-23	matchingMarkets	Analysis of Stable Matchings
2018-02-23	multfisher	Optimal Exact Tests for Multiple Binary Endpoints
2018-02-23	neat	Efficient Network Enrichment Analysis Test
2018-02-23	PropCIs	Various Confidence Interval Methods for Proportions
2018-02-23	rpart	Recursive Partitioning and Regression Trees
2018-02-23	segclust2d	Bivariate Segmentation/Clustering Methods and Tools
2018-02-23	tkRplotR	Display Resizable Plots
2018-02-22	BEACH	Biometric Exploratory Analysis Creation House
2018-02-22	betapart	Partitioning Beta Diversity into Turnover and Nestedness Components
2018-02-22	braQCA	Bootstrapped Robustness Assessment for Qualitative Comparative Analysis
2018-02-22	colmozzie	Dengue Cases and Climate Variables in Colombo Sri Lanka
2018-02-22	DGM	Dynamic Graphical Models
2018-02-22	gcerisk	Generalized Competing Event Model
2018-02-22	glmm	Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2018-02-22	irtreliability	Item Response Theory Reliability
2018-02-22	lassopv	Nonparametric P-Value Estimation for Predictors in Lasso
2018-02-22	mev	Multivariate Extreme Value Distributions
2018-02-22	msgpack	A Compact, High Speed Data Format
2018-02-22	profvis	Interactive Visualizations for Profiling R Code
2018-02-22	RCRnorm	An Integrated Regression Model for Normalizing 'NanoString nCounter' Data
2018-02-22	smbinning	Scoring Modeling and Optimal Binning
2018-02-22	stdReg	Regression Standardization
2018-02-22	suncalc	Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase
2018-02-22	VTrack	A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2018-02-22	wbsts	Multiple Change-Point Detection for Nonstationary Time Series
2018-02-21	BIOMASS	Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests
2018-02-21	chunkR	Read Tables in Chunks
2018-02-21	FlexGAM	Generalized Additive Models with Flexible Response Functions
2018-02-21	ivprobit	Instrumental Variables Probit Model
2018-02-21	matrixsampling	Simulations of Matrix Variate Distributions
2018-02-21	ncpen	Nonconvex Penalized Estimation for Generalized Linear Models
2018-02-21	oasis	Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI)
2018-02-21	phyloTop	Calculating Topological Properties of Phylogenies
2018-02-21	RcmdrPlugin.KMggplot2	R Commander Plug-in for Data Visualization with 'ggplot2'
2018-02-21	reactR	React Helpers
2018-02-21	rfUtilities	Random Forests Model Selection and Performance Evaluation
2018-02-21	rroad	Road Condition Analysis
2018-02-21	sdm	Species Distribution Modelling
2018-02-21	timeDate	Rmetrics - Chronological and Calendar Objects
2018-02-21	VeryLargeIntegers	Store and Operate with Arbitrarily Large Integers
2018-02-21	word.alignment	Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation
2018-02-20	CircMLE	Maximum Likelihood Analysis of Circular Data
2018-02-20	gvcR	Genotypic Variance Components
2018-02-20	idx2r	Convert Files to and from IDX Format to Vectors, Matrices and Arrays
2018-02-20	InterVA4	Replicate and Analyse 'InterVA4'
2018-02-20	knitr	A General-Purpose Package for Dynamic Report Generation in R
2018-02-20	knitrProgressBar	Provides Progress Bars in 'knitr'
2018-02-20	LLM	Logit Leaf Model Classifier for Binary Classification
2018-02-20	measuRing	Detection and Control of Tree-Ring Widths on Scanned Image Sections
2018-02-20	meetupapi	Access 'Meetup' API
2018-02-20	mlxR	Simulation of Longitudinal Data
2018-02-20	naivereg	Nonparametric Additive Instrumental Variable Estimator: A Group Shrinkage Estimation Perspective
2018-02-20	reinsureR	Reinsurance Treaties Application
2018-02-20	sNPLS	NPLS Regression with L1 Penalization
2018-02-20	SpatPCA	Regularized Principal Component Analysis for Spatial Data
2018-02-19	archdata	Example Datasets from Archaeological Research
2018-02-19	bmrm	Bundle Methods for Regularized Risk Minimization Package
2018-02-19	colorhcplot	Colorful Hierarchical Clustering Dendrograms
2018-02-19	confSAM	Estimates and Bounds for the False Discovery Proportion, by Permutation
2018-02-19	fmriqa	Functional MRI Quality Assurance Routines
2018-02-19	forcats	Tools for Working with Categorical Variables (Factors)
2018-02-19	GpGp	Fast Gaussian Process Computation Using Vecchia's Approximation
2018-02-19	IROmiss	Imputation Regularized Optimization Algorithm
2018-02-19	qtl	Tools for Analyzing QTL Experiments
2018-02-19	riskyr	Rendering Risk Literacy more Transparent
2018-02-18	binequality	Methods for Analyzing Binned Income Data
2018-02-18	biosignalEMG	Tools for Electromyogram Signals (EMG) Analysis
2018-02-18	bookdown	Authoring Books and Technical Documents with R Markdown
2018-02-18	codingMatrices	Alternative Factor Coding Matrices for Linear Model Formulae
2018-02-18	ECOSolveR	Embedded Conic Solver in R
2018-02-18	githubinstall	A Helpful Way to Install R Packages Hosted on GitHub
2018-02-18	imbalance	Preprocessing Algorithms for Imbalanced Datasets
2018-02-18	kamila	Methods for Clustering Mixed-Type Data
2018-02-18	likelihoodAsy	Functions for Likelihood Asymptotics
2018-02-18	PottsUtils	Utility Functions of the Potts Models
2018-02-18	pryr	Tools for Computing on the Language
2018-02-18	ratios	Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants
2018-02-18	RcppNumerical	'Rcpp' Integration for Numerical Computing Libraries
2018-02-18	SamplingStrata	Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2018-02-17	Compind	Composite Indicators Functions
2018-02-16	adklakedata	Adirondack Long-Term Lake Data
2018-02-16	cnmlcd	Maximum Likelihood Estimation of a Log-Concave Density Function
2018-02-16	dub	Unpacking Assignment for Lists via Pattern Matching
2018-02-16	getopt	C-Like 'getopt' Behavior
2018-02-16	ggmuller	Create Muller Plots of Evolutionary Dynamics
2018-02-16	googleAnalyticsR	Google Analytics API into R
2018-02-16	miscF	Miscellaneous Functions
2018-02-16	MST	Multivariate Survival Trees
2018-02-16	PakPC2017	Pakistan Population Census 2017
2018-02-16	recurse	Computes Revisitation Metrics for Trajectory Data
2018-02-16	spider	Species Identity and Evolution in R
2018-02-15	BioCircos	Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
2018-02-15	Brundle	Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data
2018-02-15	clust.bin.pair	Statistical Methods for Analyzing Clustered Matched Pair Data
2018-02-15	micropan	Microbial Pan-Genome Analysis
2018-02-15	nscancor	Non-Negative and Sparse CCA
2018-02-15	phangorn	Phylogenetic Reconstruction and Analysis
2018-02-15	ratesci	Confidence Intervals for Comparisons of Binomial or Poisson Rates
2018-02-15	rmetasim	An Individual-Based Population Genetic Simulation Environment
2018-02-15	sparsesvd	Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
2018-02-15	teigen	Model-Based Clustering and Classification with the Multivariate t Distribution
2018-02-15	vcrpart	Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2018-02-14	Chaos01	0-1 Test for Chaos
2018-02-14	CorrectedFDR	Correcting False Discovery Rates
2018-02-14	EMMIXcskew	Fitting Mixtures of CFUST Distributions
2018-02-14	eyetrackingR	Eye-Tracking Data Analysis
2018-02-14	fda.usc	Functional Data Analysis and Utilities for Statistical Computing
2018-02-14	flexclust	Flexible Cluster Algorithms
2018-02-14	FuzzyNumbers	Tools to Deal with Fuzzy Numbers
2018-02-14	IATscores	Implicit Association Test Scores Using Robust Statistics
2018-02-14	MDMR	Multivariate Distance Matrix Regression
2018-02-14	monitoR	Acoustic Template Detection in R
2018-02-14	mplot	Graphical Model Stability and Variable Selection Procedures
2018-02-14	neldermead	R Port of the 'Scilab' Neldermead Module
2018-02-14	permuco	Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals
2018-02-14	PPtreeViz	Projection Pursuit Classification Tree Visualization
2018-02-14	randtoolbox	Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2018-02-14	REBayes	Empirical Bayes Estimation and Inference
2018-02-14	spTest	Nonparametric Hypothesis Tests of Isotropy and Symmetry
2018-02-14	ssrm.logmer	Sample Size Determination for Longitudinal Designs with Binary Outcome
2018-02-14	stpp	Space-Time Point Pattern Simulation, Visualisation and Analysis
2018-02-14	TurtleGraphics	Turtle Graphics
2018-02-13	bdvis	Biodiversity Data Visualizations
2018-02-13	BH	Boost C++ Header Files
2018-02-13	clusteredinterference	Causal Effects from Observational Studies with Clustered Interference
2018-02-13	EMMIXskew	The EM Algorithm and Skew Mixture Distribution
2018-02-13	epinet	Epidemic/Network-Related Tools
2018-02-13	fishdata	A Small Collection of Fish Population Datasets
2018-02-13	heavy	Robust Estimation Using Heavy-Tailed Distributions
2018-02-13	inferr	Inferential Statistics
2018-02-13	librarysnapshot	Library Snapshot for Packages and Dependencies in Use by Current Session
2018-02-13	mixture	Finite Gaussian Mixture Models for Clustering and Classification
2018-02-13	mopa	Species Distribution MOdeling with Pseudo-Absences
2018-02-13	ncmeta	Straightforward 'NetCDF' Metadata
2018-02-13	nproc	Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
2018-02-13	optimsimplex	R Port of the 'Scilab' Optimsimplex Module
2018-02-13	pdmod	Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena
2018-02-13	Rilostat	ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service
2018-02-13	RmecabKo	An 'Rcpp' Interface for Eunjeon Project
2018-02-13	semtree	Recursive Partitioning for Structural Equation Models
2018-02-13	SIS	Sure Independence Screening
2018-02-13	TexExamRandomizer	Personalizes and Randomizes Exams Written in 'LaTeX'
2018-02-12	AnaCoDa	Analysis of Codon Data under Stationarity using a Bayesian Framework
2018-02-12	basicspace	Recovering a Basic Space from Issue Scales
2018-02-12	Cluster.OBeu	Cluster Analysis 'OpenBudgets'
2018-02-12	DynTxRegime	Methods for Estimating Optimal Dynamic Treatment Regimes
2018-02-12	gamm4.test	Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods
2018-02-12	gglorenz	Plotting Lorenz Curve with the Blessing of 'ggplot2'
2018-02-12	GUniFrac	Generalized UniFrac Distances
2018-02-12	inca	Integer Calibration
2018-02-12	Lavash	Lava Estimation for the Sum of Sparse and Dense Signals
2018-02-12	microseq	Basic Biological Sequence Handling
2018-02-12	npmlda	Nonparametric Models for Longitudinal Data
2018-02-12	Pomic	Pattern Oriented Modelling Information Criterion
2018-02-12	revdbayes	Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
2018-02-12	scoring	Proper Scoring Rules
2018-02-12	shinyalert	Easily Create Pretty Popup Messages (Modals) in 'Shiny'
2018-02-12	shinyKGode	An Interactive Application for ODE Parameter Inference Using Gradient Matching
2018-02-12	SolveLS	Iterative Methods for Solving Linear System of Equations
2018-02-12	spMC	Continuous-Lag Spatial Markov Chains
2018-02-12	swCRTdesign	Stepped Wedge Cluster Randomized Trial (SW CRT) Design
2018-02-12	tatoo	Combine and Export Data Frames
2018-02-12	telegram.bot	Develop a 'Telegram Bot' with R
2018-02-12	wnominate	Multidimensional Vote Scaling Software
2018-02-11	countrycode	Convert Country Names and Country Codes
2018-02-11	distrom	Distributed Multinomial Regression
2018-02-11	estimability	Tools for Assessing Estimability of Linear Predictions
2018-02-11	fivethirtyeight	Data and Code Behind the Stories and Interactives at 'FiveThirtyEight'
2018-02-11	HDoutliers	Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers
2018-02-11	lakemorpho	Lake Morphometry Metrics
2018-02-11	MomTrunc	Moments of Folded and Doubly Truncated Multivariate Distributions
2018-02-11	MultiOrd	Generation of Multivariate Ordinal Variates
2018-02-11	nipals	Principal Components Analysis using NIPALS with Gram-Schmidt Orthogonalization
2018-02-11	OrdNor	Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
2018-02-11	pheno2geno	High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2018-02-11	PoisNor	Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals
2018-02-11	rorcid	Interface to the 'Orcid.org' 'API'
2018-02-11	rphast	Interface to 'PHAST' Software for Comparative Genomics
2018-02-11	rtk	Rarefaction Tool Kit
2018-02-11	snappier	Compress and Decompress 'Snappy' Encoded Data
2018-02-11	textir	Inverse Regression for Text Analysis
2018-02-10	BinNor	Simultaneous Generation of Multivariate Binary and Normal Variates
2018-02-10	dataonderivatives	Easily Source Publicly Available Data on Derivatives
2018-02-10	ensembleEN	Ensembling Regularized Linear Models
2018-02-10	rrecsys	Environment for Evaluating Recommender Systems
2018-02-10	support.BWS	Basic Functions for Supporting an Implementation of Best-Worst Scaling
2018-02-10	tidygraph	A Tidy API for Graph Manipulation
2018-02-09	BSPADATA	Bayesian Proposal to Fit Spatial Econometric Models
2018-02-09	Dykstra	Quadratic Programming using Cyclic Projections
2018-02-09	facilitation	A C++ Framework for Plant-Plant Interaction IBMs
2018-02-09	idealstan	Bayesian IRT Ideal Point Models with 'Stan'
2018-02-09	likeLTD	Tools to Evaluate DNA Profile Evidence
2018-02-09	LSDinterface	Reading LSD Results (.res) Files
2018-02-09	NatureSounds	Animal Sounds for Bioacustic Analysis
2018-02-09	NCutYX	Clustering of Omics Data of Multiple Types with a Multilayer Network Representation
2018-02-09	npcopTest	Non Parametric Test for Detecting Changes in the Copula
2018-02-09	oxcAAR	Interface to 'OxCal' Radiocarbon Calibration
2018-02-09	sme	Smoothing-Splines Mixed-Effects Models
2018-02-09	srp	Smooth-Rough Partitioning of the Regression Coefficients
2018-02-09	vote	Election Vote Counting
2018-02-08	adepro	A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles
2018-02-08	adjclust	Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
2018-02-08	adnuts	No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models
2018-02-08	BIGDAWG	Case-Control Analysis of Multi-Allelic Loci
2018-02-08	CUB	A Class of Mixture Models for Ordinal Data
2018-02-08	dynr	Dynamic Modeling in R
2018-02-08	fdadensity	Functional Data Analysis for Density Functions by Transformation to a Hilbert Space
2018-02-08	geozoning	Zoning Methods for Spatial Data
2018-02-08	micromap	Linked Micromap Plots
2018-02-08	mvoutlier	Multivariate Outlier Detection Based on Robust Methods
2018-02-08	oc	Optimal Classification Roll Call Analysis Software
2018-02-08	OutliersO3	Draws Overview of Outliers (O3) Plots
2018-02-08	qcQpcr	Histone ChIP-Seq qPCR Analyzer
2018-02-08	rcartocolor	'CARTOColors' Palettes
2018-02-08	specklestar	Reduction of Speckle Data from BTA 6-m Telescope
2018-02-08	SWMPr	Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2018-02-07	coefplot	Plots Coefficients from Fitted Models
2018-02-07	FADA	Variable Selection for Supervised Classification in High Dimension
2018-02-07	filelock	Portable File Locking
2018-02-07	fulltext	Full Text of 'Scholarly' Articles Across Many Data Sources
2018-02-07	funbarRF	Fungal Species Identification using DNA Barcode with Random Forest
2018-02-07	glarma	Generalized Linear Autoregressive Moving Average Models
2018-02-07	glmtlp	Truncated Lasso Regularized Generalized Linear Models
2018-02-07	jmotif	Time Series Analysis Toolkit Based on Symbolic Aggregate Dicretization, i.e. SAX
2018-02-07	LowRankQP	Low Rank Quadratic Programming
2018-02-07	powerMediation	Power/Sample Size Calculation for Mediation Analysis
2018-02-07	powerSurvEpi	Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2018-02-07	PTXQC	Quality Report Generation for MaxQuant Results
2018-02-07	RcppEigen	'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2018-02-07	rosqp	Quadratic Programming Solver using the 'OSQP' Library
2018-02-07	shape	Functions for Plotting Graphical Shapes, Colors
2018-02-07	SuperExactTest	Exact Test and Visualization of Multi-Set Intersections
2018-02-07	swirlify	A Toolbox for Writing 'swirl' Courses
2018-02-07	TSstudio	Tools for Time Series Analysis and Forecasting
2018-02-07	valuer	Pricing of Variable Annuities
2018-02-07	WindCurves	Tool to Fit Wind Turbine Power Curves
2018-02-06	CENFA	Climate and Ecological Niche Factor Analysis
2018-02-06	CLA	Critical Line Algorithm in Pure R
2018-02-06	climextRemes	Tools for Analyzing Climate Extremes
2018-02-06	DACF	Data Analysis with Ceiling and/or Floor Data
2018-02-06	detectRUNS	Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
2018-02-06	DWDLargeR	Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination
2018-02-06	ecespa	Functions for Spatial Point Pattern Analysis
2018-02-06	googlePrintr	Connect to 'Google Cloud Print' API
2018-02-06	hetGP	Heteroskedastic Gaussian Process Modeling and Design under Replication
2018-02-06	lira	LInear Regression in Astronomy
2018-02-06	totalcensus	Extract High Resolution Census Data
2018-02-06	valection	Sampler for Verification Studies
2018-02-05	cepreader	Read 'CEP' and Legacy 'CANOCO' Files
2018-02-05	dvmisc	Faster Computation of Common Statistics and Miscellaneous Functions
2018-02-05	entropart	Entropy Partitioning to Measure Diversity
2018-02-05	GetTDData	Get Data for Brazilian Bonds (Tesouro Direto)
2018-02-05	ggbuildr	Save Incremental Builds of Plots
2018-02-05	gibble	Geometry Decomposition
2018-02-05	lmodel2	Model II Regression
2018-02-05	MBC	Multivariate Bias Correction of Climate Model Outputs
2018-02-05	migest	Methods for the Indirect Estimation of Bilateral Migration
2018-02-05	multiApply	Apply Functions to Multiple Multidimensional Arguments
2018-02-05	nord	Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes
2018-02-05	pbdBASE	Programming with Big Data – Base Wrappers for Distributed Matrices
2018-02-05	population	Models for Simulating Populations
2018-02-05	quantoptr	Algorithms for Quantile- And Mean-Optimal Treatment Regimes
2018-02-05	RaPKod	Random Projection Kernel Outlier Detector
2018-02-05	seriation	Infrastructure for Ordering Objects Using Seriation
2018-02-05	SOMbrero	SOM Bound to Realize Euclidean and Relational Outputs
2018-02-05	survivalsvm	Survival Support Vector Analysis
2018-02-05	zscorer	Child Anthropometry z-Score Calculator
2018-02-04	aVirtualTwins	Adaptation of Virtual Twins Method from Jared Foster
2018-02-04	cancensus	Canadian Census Data and Geography from the 'CensusMapper' API
2018-02-04	CTT	Classical Test Theory Functions
2018-02-04	eda4treeR	Experimental Design and Analysis for Tree Improvement
2018-02-04	funtimes	Functions for Time Series Analysis
2018-02-04	gk	g-and-k and g-and-h Distribution Functions
2018-02-04	mldr	Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2018-02-04	rmdshower	'R' 'Markdown' Format for 'shower' Presentations
2018-02-04	rugarch	Univariate GARCH Models
2018-02-03	fuzzyforest	Fuzzy Forests
2018-02-03	pcev	Principal Component of Explained Variance
2018-02-02	adegenet	Exploratory Analysis of Genetic and Genomic Data
2018-02-02	BNN	Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection
2018-02-02	covatest	Tests on Properties of Space-Time Covariance Functions
2018-02-02	fslr	Wrapper Functions for FSL ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
2018-02-02	gcite	Google Citation Parser
2018-02-02	ICSOutlier	Outlier Detection Using Invariant Coordinate Selection
2018-02-02	miic	Learning Causal or Non-Causal Graphical Models Using Information Theory
2018-02-02	msm	Multi-State Markov and Hidden Markov Models in Continuous Time
2018-02-02	pinnacle.API	A Wrapper for the Pinnacle API
2018-02-02	pipeGS	Permutation p-Value Estimation for Gene Set Tests
2018-02-02	pmclust	Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model
2018-02-02	RBesT	R Bayesian Evidence Synthesis Tools
2018-02-02	SoyNAM	Soybean Nested Association Mapping Dataset
2018-02-02	SpaDES.addins	Development Tools for 'SpaDES' and 'SpaDES' Modules
2018-02-02	stapler	Simultaneous Truth and Performance Level Estimation
2018-02-02	wrswoR	Weighted Random Sampling without Replacement
2018-02-02	Zseq	Integer Sequence Generator
2018-02-01	ald	The Asymmetric Laplace Distribution
2018-02-01	asymmetry	Multidimensional Scaling of Asymmetric Data
2018-02-01	awsMethods	Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
2018-02-01	BsMD	Bayes Screening and Model Discrimination
2018-02-01	cifti	Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
2018-02-01	d3heatmap	Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2018-02-01	EMCluster	EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2018-02-01	FRESA.CAD	Feature Selection Algorithms for Computer Aided Diagnosis
2018-02-01	GGMselect	Gaussian Graphs Models Selection
2018-02-01	gifti	Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
2018-02-01	lqr	Robust Linear Quantile Regression
2018-02-01	modmarg	Calculating Marginal Effects and Levels with Errors
2018-02-01	neurobase	'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
2018-02-01	opticut	Likelihood Based Optimal Partitioning and Indicator Species Analysis
2018-02-01	RVowpalWabbit	R Interface to the Vowpal Wabbit
2018-02-01	topmodel	Implementation of the Hydrological Model TOPMODEL in R
2018-02-01	viridisLite	Default Color Maps from 'matplotlib' (Lite Version)
2018-01-31	denoiSeq	Differential Expression Analysis Using a Bottom-Up Model
2018-01-31	detect	Analyzing Wildlife Data with Detection Error
2018-01-31	GPareto	Gaussian Processes for Pareto Front Estimation and Optimization
2018-01-31	Massign	Simple Matrix Construction
2018-01-31	MixGHD	Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2018-01-31	mvnfast	Fast Multivariate Normal and Student's t Methods
2018-01-31	nlsr	Functions for Nonlinear Least Squares Solutions
2018-01-31	OOR	Optimistic Optimization in R
2018-01-31	RCrypto	'Httr' Implementation of the 'Coinmarketcap' API
2018-01-31	rPackedBar	Packed Bar Charts with 'plotly'
2018-01-31	RTriangle	Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2018-01-31	SiMRiv	Simulating Multistate Movements in River/Heterogeneous Landscapes
2018-01-30	ABPS	The Abnormal Blood Profile Score to Detect Blood Doping
2018-01-30	asciiruler	Render an ASCII Ruler
2018-01-30	BeSS	Best Subset Selection in Linear, Logistic and CoxPH Models
2018-01-30	DT	A Wrapper of the JavaScript Library 'DataTables'
2018-01-30	errorist	Automatically Search Errors or Warnings
2018-01-30	ggQC	Quality Control Charts for 'ggplot'
2018-01-30	gnorm	Generalized Normal/Exponential Power Distribution
2018-01-30	indelmiss	Insertion Deletion Analysis While Accounting for Possible Missing Data
2018-01-30	KRIG	Spatial Statistic with Kriging
2018-01-30	markophylo	Markov Chain Models for Phylogenetic Trees
2018-01-30	mr.raps	Two Sample Mendelian Randomization using Robust Adjusted Profile Score
2018-01-30	profmem	Simple Memory Profiling for R
2018-01-30	RBMRB	BMRB Data Access and Visualization
2018-01-30	relatable	Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations
2018-01-30	robustBLME	Robust Bayesian Linear Mixed-Effects Models using ABC
2018-01-30	rpivotTable	Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
2018-01-30	rtfbs	Transcription Factor Binding Site Identification Tool
2018-01-30	scdensity	Shape-Constrained Kernel Density Estimation
2018-01-30	smotefamily	A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE
2018-01-30	spatstat.local	Extension to 'spatstat' for Local Composite Likelihood
2018-01-30	String2AdjMatrix	Creates an Adjacency Matrix from a List of Strings
2018-01-30	tibbletime	Time Aware Tibbles
2018-01-30	timereg	Flexible Regression Models for Survival Data
2018-01-29	atsd	Support Querying Axibase Time-Series Database
2018-01-29	bmotif	Counting Motifs in Bipartite Networks
2018-01-29	cherry	Multiple Testing Methods for Exploratory Research
2018-01-29	cometExactTest	Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2018-01-29	dalmatian	Automating the Fitting of Double Linear Mixed Models in 'JAGS'
2018-01-29	fields	Tools for Spatial Data
2018-01-29	hdrcde	Highest Density Regions and Conditional Density Estimation
2018-01-29	ludic	Linkage Using Diagnosis Codes
2018-01-29	networkR	Network Analysis and Visualization
2018-01-29	NIRStat	Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data
2018-01-29	phylotate	Phylogenies with Annotations
2018-01-29	rubias	Bayesian Inference from the Conditional Genetic Stock Identification Model
2018-01-29	SSDM	Stacked Species Distribution Modelling
2018-01-29	subselect	Selecting Variable Subsets
2018-01-29	timetools	Seasonal/Sequential (Instants/Durations, Even or not) Time Series
2018-01-29	tRophicPosition	Bayesian Trophic Position Calculation with Stable Isotopes
2018-01-29	waver	Calculate Fetch and Wave Energy
2018-01-28	adehabitatLT	Analysis of Animal Movements
2018-01-28	bcrm	Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
2018-01-28	clustRcompaR	Easy Interface for Clustering a Set of Documents and Exploring Group- Based Patterns
2018-01-28	glmpath	L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
2018-01-28	libsoc	Read, Create and Write 'PharmML' Standard Output (so) XML Files
2018-01-28	lwgeom	Bindings to Selected 'liblwgeom' Functions for Simple Features
2018-01-28	oce	Analysis of Oceanographic Data
2018-01-28	rrBLUP	Ridge Regression and Other Kernels for Genomic Selection
2018-01-28	stepPlr	L2 Penalized Logistic Regression with Stepwise Variable Selection
2018-01-28	stm	Estimation of the Structural Topic Model
2018-01-28	zeallot	Multiple, Unpacking, and Destructuring Assignment
2018-01-27	ANOVAreplication	Test ANOVA Replications by Means of the Prior Predictive p-Value
2018-01-27	bigtcr	Nonparametric Analysis of Bivariate Gap Time with Competing Risks
2018-01-27	rhandsontable	Interface to the 'Handsontable.js' Library
2018-01-26	aidar	Tools for Reading AIDA Files
2018-01-26	bcrypt	'Blowfish' Password Hashing Algorithm
2018-01-26	gutenbergr	Download and Process Public Domain Works from Project Gutenberg
2018-01-26	hypergea	Hypergeometric Tests
2018-01-26	ic.infer	Inequality Constrained Inference in Linear Normal Situations
2018-01-26	IndexNumR	Index Number Calculation
2018-01-26	jmuOutlier	Permutation Tests for Nonparametric Statistics
2018-01-26	kokudosuuchi	R Interface to 'Kokudo Suuchi' API
2018-01-26	languagelayeR	Access the 'languagelayer' API
2018-01-26	LSD	Lots of Superior Depictions
2018-01-26	magic	Create and Investigate Magic Squares
2018-01-26	matchingR	Matching Algorithms in R and C++
2018-01-26	mogavs	Multiobjective Genetic Algorithm for Variable Selection in Regression
2018-01-26	popkin	Estimate Kinship and FST under Arbitrary Population Structure
2018-01-26	prrd	Parallel Runs of Reverse Depends
2018-01-26	R2DT	Translation of Base R-Like Functions for 'data.table' Objects
2018-01-26	ROI	R Optimization Infrastructure
2018-01-26	unrtf	Extract Text from Rich Text Format (RTF) Documents
2018-01-26	waterfalls	Create Waterfall Charts using 'ggplot2' Simply
2018-01-25	aggregation	p-Value Aggregation Methods
2018-01-25	aucm	AUC Maximization
2018-01-25	censusr	Collect Data from the Census API
2018-01-25	crimCV	Group-Based Modelling of Longitudinal Data
2018-01-25	DBItest	Testing 'DBI' Back Ends
2018-01-25	dendroextras	Extra Functions to Cut, Label and Colour Dendrogram Clusters
2018-01-25	diagis	Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
2018-01-25	ETLUtils	Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2018-01-25	finch	Parse Darwin Core Files
2018-01-25	gradDescent	Gradient Descent for Regression Tasks
2018-01-25	heims	Decode and Validate HEIMS Data from Department of Education, Australia
2018-01-25	iotools	I/O Tools for Streaming
2018-01-25	lazyWeave	LaTeX Wrappers for R Users
2018-01-25	MODIS	Acquisition and Processing of MODIS Products
2018-01-25	multiselect	Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome
2018-01-24	argparse	Command Line Optional and Positional Argument Parser
2018-01-24	blockcluster	Coclustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
2018-01-24	datapasta	R Tools for Data Copy-Pasta
2018-01-24	devFunc	Clear and Condense Argument Check for User-Defined Functions
2018-01-24	geno2proteo	Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
2018-01-24	highlightHTML	Highlight HTML Text and Tables
2018-01-24	letsR	Tools for Data Handling and Analysis in Macroecology
2018-01-24	microbenchmark	Accurate Timing Functions
2018-01-24	MPR.genotyping	Maximum Parsimony of Recombination to Infer Parental Genotypes
2018-01-24	neverhpfilter	A Better Alternative to the Hodrick-Prescott Filter
2018-01-24	pgam	Poisson-Gamma Additive Models
2018-01-24	RcppGreedySetCover	Greedy Set Cover
2018-01-24	RInSp	R Individual Specialization (RInSp)
2018-01-24	SamplerCompare	A Framework for Comparing the Performance of MCMC Samplers
2018-01-24	santaR	Short Asynchronous Time-Series Analysis
2018-01-24	scanstatistics	Space-Time Anomaly Detection using Scan Statistics
2018-01-24	showimage	Show an Image on an 'R' Graphics Device
2018-01-24	strandCet	Estimation of Biological Parameters from Stranded Cetaceans
2018-01-24	TCIApathfinder	Client for the Cancer Imaging Archive REST API
2018-01-24	thief	Temporal Hierarchical Forecasting
2018-01-24	TSS.RESTREND	Time Series Segmentation of Residual Trends
2018-01-24	TTR	Technical Trading Rules
2018-01-24	xml2	Parse XML
2018-01-23	BibPlots	Plot Functions for Use in Bibliometrics
2018-01-23	crch	Censored Regression with Conditional Heteroscedasticity
2018-01-23	greta	Simple and Scalable Statistical Modelling in R
2018-01-23	hdm	High-Dimensional Metrics
2018-01-23	httk	High-Throughput Toxicokinetics
2018-01-23	MaxentVariableSelection	Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling
2018-01-23	MRS	Multi-Resolution Scanning for Cross-Sample Differences
2018-01-23	mtsdi	Multivariate Time Series Data Imputation
2018-01-23	RATest	Randomization Tests
2018-01-23	RDocumentation	Integrate R with 'RDocumentation'
2018-01-23	soilDB	Soil Database Interface
2018-01-23	Xplortext	Statistical Analysis of Textual Data
2018-01-23	zoon	Reproducible, Accessible & Shareable Species Distribution Modelling
2018-01-22	BANOVA	Hierarchical Bayesian ANOVA Models
2018-01-22	Bioi	Biological Image Analysis
2018-01-22	cleanNLP	A Tidy Data Model for Natural Language Processing
2018-01-22	ECoL	Complexity Measures for Classification Problems
2018-01-22	enetLTS	Robust and Sparse Methods for High Dimensional Linear and Logistic Regression
2018-01-22	gLRTH	Genome-Wide Association and Linkage Analysis under Heterogeneity
2018-01-22	jcext	Extended Classification of Weather Types
2018-01-22	nonnest2	Tests of Non-Nested Models
2018-01-22	OmicsPLS	Perform Two-Way Orthogonal Partial Least Squares
2018-01-22	pals	Color Palettes, Colormaps, and Tools to Evaluate Them
2018-01-22	PAmeasures	Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data
2018-01-22	tibble	Simple Data Frames
2018-01-22	TimeSeries.OBeu	Time Series Analysis 'OpenBudgets'
2018-01-22	uiucthemes	'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
2018-01-21	CreditRisk	Evaluation of Credit Risk with Structural and Reduced Form Models
2018-01-21	geophys	Geophysics, Continuum Mechanics, Gravity Modeling
2018-01-21	itsmr	Time Series Analysis Using the Innovations Algorithm
2018-01-21	LinkageMapView	Plot Linkage Group Maps with Quantitative Trait Loci
2018-01-21	listenv	Environments Behaving (Almost) as Lists
2018-01-21	MGLM	Multivariate Response Generalized Linear Models
2018-01-21	nofrills	Low-Cost Anonymous Functions
2018-01-21	PropClust	Propensity Clustering and Decomposition
2018-01-21	Rblpapi	R Interface to 'Bloomberg'
2018-01-21	rMR	Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions
2018-01-21	rSCA	An R Package for Stepwise Cluster Analysis
2018-01-21	tropAlgebra	Tropical Algebraic Functions
2018-01-20	dat	Tools for Data Manipulation
2018-01-20	equSA	Estimate Directed and Undirected Graphical Models and Construct Networks
2018-01-20	ewoc	Escalation with Overdose Control
2018-01-20	LoopAnalyst	A Collection of Tools to Conduct Levins' Loop Analysis
2018-01-20	RClickhouse	A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support
2018-01-20	rstan	R Interface to Stan
2018-01-20	Rwave	Time-Frequency Analysis of 1-D Signals
2018-01-20	StanHeaders	C++ Header Files for Stan
2018-01-20	svgViewR	3D Animated Interactive Visualizations Using SVG
2018-01-19	abjutils	Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
2018-01-19	adabag	Applies Multiclass AdaBoost.M1, SAMME and Bagging
2018-01-19	bayesTFR	Bayesian Fertility Projection
2018-01-19	crossword.r	Generating Crosswords from Word Lists
2018-01-19	descr	Descriptive Statistics
2018-01-19	dynatopmodel	Implementation of the Dynamic TOPMODEL Hydrological Model
2018-01-19	face	Fast Covariance Estimation for Sparse Functional Data
2018-01-19	glamlasso	Penalization in Large Scale Generalized Linear Array Models
2018-01-19	HDPenReg	High-Dimensional Penalized Regression
2018-01-19	lbreg	Log-Binomial Regression with Constrained Optimization
2018-01-19	LN0SCIs	Simultaneous CIs for Ratios of Means of Log-Normal Populations with Zeros
2018-01-19	longRPart2	Recursive Partitioning of Longitudinal Data
2018-01-19	mvabund	Statistical Methods for Analysing Multivariate Abundance Data
2018-01-19	pivotaltrackR	A Client for the 'Pivotal Tracker' API
2018-01-19	PSW	Propensity Score Weighting Methods for Dichotomous Treatments
2018-01-19	RNAseqNet	Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation
2018-01-19	rosetteApi	'Rosette' API
2018-01-19	rrpack	Reduced-Rank Regression
2018-01-18	binnednp	Nonparametric Estimation for Interval-Grouped Data
2018-01-18	canprot	Chemical Composition of Differential Protein Expression
2018-01-18	cgdsr	R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2018-01-18	dtree	Decision Trees
2018-01-18	ensembleBMA	Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2018-01-18	EnvCpt	Detection of Structural Changes in Climate and Environment Time Series
2018-01-18	GEOmap	Topographic and Geologic Mapping
2018-01-18	gkmSVM	Gapped-Kmer Support Vector Machine
2018-01-18	homologene	Quick Access to Homology Information
2018-01-18	PEIP	Geophysical Inverse Theory and Optimization
2018-01-18	PythonInR	Use 'Python' from Within 'R'
2018-01-18	Renvlp	Computing Envelope Estimators
2018-01-18	RFOC	Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2018-01-18	RPMG	Graphical User Interface (GUI) for Interactive R Analysis Sessions
2018-01-18	RTOMO	Visualization for Seismic Tomography
2018-01-18	SDT	Self-Determination Theory Measures
2018-01-18	SMMA	Soft Maximin Estimation for Large Scale Array-Tensor Models
2018-01-18	TukeyRegion	Tukey Region and Median
2018-01-18	vecsets	Like base::sets Tools But Keeps Duplicate Elements
2018-01-18	zoeppritz	Seismic Reflection and Scattering Coefficients
2018-01-17	bbw	Blocked Weighted Bootstrap
2018-01-17	conting	Bayesian Analysis of Contingency Tables
2018-01-17	datarobot	'DataRobot' Predictive Modeling API
2018-01-17	dLagM	Time Series Regression Models with Distributed Lag Models
2018-01-17	GenSA	Generalized Simulated Annealing
2018-01-17	idefix	Efficient Designs for Discrete Choice Experiments
2018-01-17	markmyassignment	Automatic Marking of R Assignments
2018-01-17	mau	Decision Models with Multi Attribute Utility Theory
2018-01-17	sumFREGAT	Fast Region-Based Association Tests on Summary Statistics
2018-01-16	bnpsd	Simulate Genotypes from the BN-PSD Admixture Model
2018-01-16	dawai	Discriminant Analysis with Additional Information
2018-01-16	KernelKnn	Kernel k Nearest Neighbors
2018-01-16	LPM	Linear Parametric Models Applied to Hydrological Series
2018-01-16	mazeinda	Monotonic Association on Zero-Inflated Data
2018-01-16	natural	Estimating the Error Variance in a High-Dimensional Linear Model
2018-01-16	opencage	Interface to the OpenCage API
2018-01-16	optimus	Model Based Diagnostics for Multivariate Cluster Analysis
2018-01-16	palmtree	Partially Additive (Generalized) Linear Model Trees
2018-01-16	prettydoc	Creating Pretty Documents from R Markdown
2018-01-16	randomLCA	Random Effects Latent Class Analysis
2018-01-16	ROI.plugin.lpsolve	'lp_solve' Plugin for the 'R' Optimization Infrastructure
2018-01-16	showtext	Using Fonts More Easily in R Graphs
2018-01-16	splashr	Tools to Work with the 'Splash' 'JavaScript' Rendering and Scraping Service
2018-01-16	sysfonts	Loading Fonts into R
2018-01-16	toolmaRk	Tests for Same-Source of Toolmarks
2018-01-15	bnlearn	Bayesian Network Structure Learning, Parameter Learning and Inference
2018-01-15	easySdcTable	Easy Interface to the Statistical Disclosure Control Package 'sdcTable'
2018-01-15	FREGAT	Family REGional Association Tests
2018-01-15	GoogleKnowledgeGraphR	Retrieve Information from 'Google Knowledge Graph' API
2018-01-15	hexbin	Hexagonal Binning Routines
2018-01-15	io	A Unified Framework for Input-Output Operations in R
2018-01-15	miniCRAN	Create a Mini Version of CRAN Containing Only Selected Packages
2018-01-15	photobiologyFilters	Spectral Transmittance Data for Filters
2018-01-15	r6extended	Extension for 'R6' Base Class
2018-01-15	RPPanalyzer	Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2018-01-15	tcgsaseq	Time-Course Gene Set Analysis for RNA-Seq Data
2018-01-14	adaptMCMC	Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
2018-01-14	COMBAT	A Combined Association Test for Genes using Summary Statistics
2018-01-14	cordillera	Calculation of the OPTICS Cordillera
2018-01-14	Fragman	Fragment Analysis in R
2018-01-14	pcaPP	Robust PCA by Projection Pursuit
2018-01-14	photobiologyLEDs	Spectral Data for Light-Emitting-Diodes
2018-01-13	Emcdf	Computation and Visualization of Empirical Joint Distribution (Empirical Joint CDF)
2018-01-13	gimms	Download and Process GIMMS NDVI3g Data
2018-01-13	hkclustering	Ensemble Clustering using K Means and Hierarchical Clustering
2018-01-13	MatrixEQTL	Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
2018-01-13	PGRdup	Discover Probable Duplicates in Plant Genetic Resources Collections
2018-01-13	RndTexExams	Build and Grade Multiple Choice Exams with Randomized Content
2018-01-13	stubthat	Stubbing Framework for R
2018-01-13	SuperRanker	Sequential Rank Agreement
2018-01-13	TukeyC	Conventional Tukey Test
2018-01-13	uavRmp	UAV Mission Planner
2018-01-13	wunderscraper	Scrape the 'Wunderground' API
2018-01-12	moult	Models for Analysing Moult in Birds
2018-01-12	ngspatial	Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data
2018-01-12	preText	Diagnostics to Assess the Effects of Text Preprocessing Decisions
2018-01-12	PRIMME	Eigenvalues and Singular Values and Vectors from Large Matrices
2018-01-12	qCBA	Quantitative Classification by Association Rules
2018-01-12	rSQM	Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping
2018-01-12	yearn	Use and if Needed Install Packages from CRAN, BioConductor, CRAN Archive, and GitHub
2018-01-11	AlleleRetain	Allele Retention, Inbreeding, and Demography
2018-01-11	bayesSurv	Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2018-01-11	bigmemory	Manage Massive Matrices with Shared Memory and Memory-Mapped Files
2018-01-11	DiceView	Plot Methods for Computer Experiments Design and Surrogate
2018-01-11	DirectedClustering	Directed Weighted Clustering Coefficient
2018-01-11	irlba	Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices
2018-01-11	kexpmv	Matrix Exponential using Krylov Subspace Routines
2018-01-11	QCApro	Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis
2018-01-11	text2vec	Modern Text Mining Framework for R
2018-01-11	tsdf	Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
2018-01-10	BinOrdNonNor	Concurrent Generation of Binary, Ordinal and Continuous Data
2018-01-10	BivUnifBin	Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
2018-01-10	brant	Test for Parallel Regression Assumption
2018-01-10	changepointsVar	Change-Points Detections for Changes in Variance
2018-01-10	CorrToolBox	Modeling Correlational Magnitude Transformations in Discretization Contexts
2018-01-10	ExpDE	Modular Differential Evolution for Experimenting with Operators
2018-01-10	FinancialInstrument	Financial Instrument Model Infrastructure and Meta-Data
2018-01-10	IATScore	Scoring Algorithm for the Implicit Association Test (IAT)
2018-01-10	influxdbr	R Interface to InfluxDB
2018-01-10	lba	Latent Budget Analysis for Compositional Data
2018-01-10	MBESS	The MBESS R Package
2018-01-10	motmot.2.0	Models of Trait Macroevolution on Trees
2018-01-10	MultiRNG	Multivariate Pseudo-Random Number Generation
2018-01-10	multivariance	Measuring Multivariate Dependence Using Distance Multivariance
2018-01-10	ordinalCont	Ordinal Regression Analysis for Continuous Scales
2018-01-10	pbapply	Adding Progress Bar to '*apply' Functions
2018-01-10	phylosignal	Exploring the Phylogenetic Signal in Continuous Traits
2018-01-10	PoisBinOrdNonNor	Generation of Up to Four Different Types of Variables
2018-01-10	PoisBinOrdNor	Data Generation with Poisson, Binary, Ordinal and Normal Components
2018-01-10	QTLRel	Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
2018-01-10	RandPro	Random Projection with Classification
2018-01-10	rFSA	Feasible Solution Algorithm for Finding Best Subsets and Interactions
2018-01-10	RMixpanel	API for Mixpanel
2018-01-10	strider	Strided Iterator and Range
2018-01-10	tadaatoolbox	Helpers for Data Analysis and Presentation Focused on Undergrad Psychology
2018-01-10	tdr	Target Diagram
2018-01-10	UnivRNG	Univariate Pseudo-Random Number Generation
2018-01-09	annovarR	Integrated Framework to Annotate Genetic Variants
2018-01-09	ATR	Alternative Tree Representation
2018-01-09	bullwhipgame	Bullwhip Effect Demo in Shiny
2018-01-09	easySVG	An Easy SVG Basic Elements Generator
2018-01-09	elevatr	Access Elevation Data from Various APIs
2018-01-09	formulize	Add Formula Interfaces to Modelling Functions
2018-01-09	MatchIt	Nonparametric Preprocessing for Parametric Causal Inference
2018-01-09	osmose	Object Oriented Simulator of Marine Ecosystems
2018-01-09	Rbgs	Reading and Background Subtraction in Videos
2018-01-09	RGBM	LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction
2018-01-09	rlme	Rank-Based Estimation and Prediction in Random Effects Nested Models
2018-01-09	univOutl	Detection of Univariate Outliers
2018-01-09	walker	Bayesian Regression with Time-Varying Coefficients
2018-01-08	clam	Classical Age-Depth Modelling of Cores from Deposits
2018-01-08	comparer	Compare Output and Run Time
2018-01-08	constants	Reference on Constants, Units and Uncertainty
2018-01-08	csv	Read and Write CSV Files with Selected Conventions
2018-01-08	dprint	Print Tabular Data to Graphics Device
2018-01-08	dynsbm	Dynamic Stochastic Block Models
2018-01-08	factoptd	Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments
2018-01-08	gtWAS	Genome and Transcriptome Wide Association Study
2018-01-08	mistat	Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2018-01-08	netrankr	Analyzing Partial Rankings in Networks
2018-01-08	sgee	Stagewise Generalized Estimating Equations
2018-01-08	shinyjs	Easily Improve the User Experience of Your Shiny Apps in Seconds
2018-01-08	spanish	Translate Quantities from Strings Spelled in Spanish to Integer
2018-01-08	xptr	Manipulating External Pointer
2018-01-07	ExplainPrediction	Explanation of Predictions for Classification and Regression Models
2018-01-07	fingerprint	Functions to Operate on Binary Fingerprint Data
2018-01-07	grove	Wavelet Functional ANOVA Through Markov Groves
2018-01-07	rms	Regression Modeling Strategies
2018-01-07	RWekajars	R/Weka Interface Jars
2018-01-06	chron	Chronological Objects which can Handle Dates and Times
2018-01-06	date	Functions for Handling Dates
2018-01-06	DPpackage	Bayesian Nonparametric Modeling in R
2018-01-06	DRR	Dimensionality Reduction via Regression
2018-01-06	fmbasics	Financial Market Building Blocks
2018-01-06	qlcData	Processing Data for Quantitative Language Comparison (QLC)
2018-01-06	SciViews	SciViews - Main package
2018-01-05	APPEstimation	Adjusted Prediction Model Performance Estimation
2018-01-05	bda	Density Estimation for Grouped Data
2018-01-05	binst	Data Preprocessing, Binning for Classification and Regression
2018-01-05	bReeze	Functions for Wind Resource Assessment
2018-01-05	coindeskr	Access 'CoinDesk' Bitcoin Price Index API
2018-01-05	diffusion	Forecast the Diffusion of New Products
2018-01-05	DNetFinder	Estimating Differential Networks under Semiparametric Gaussian Graphical Models
2018-01-05	ellipse	Functions for Drawing Ellipses and Ellipse-Like Confidence Regions
2018-01-05	fdrDiscreteNull	False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
2018-01-05	LearnGeom	Learning Plane Geometry
2018-01-05	MAPA	Multiple Aggregation Prediction Algorithm
2018-01-05	MatManlyMix	Matrix Clustering with Gaussian and Manly Mixture Models
2018-01-05	mra	Mark-Recapture Analysis
2018-01-05	paramlink	Parametric Linkage and Other Pedigree Analysis in R
2018-01-05	phuse	Web Application Framework for 'PhUSE' Scripts
2018-01-05	probout	Unsupervised Multivariate Outlier Probabilities for Large Datasets
2018-01-05	profile	Read, Manipulate, and Write Profiler Data
2018-01-05	ramchoice	Estimation and Inference in Random Attention Models
2018-01-05	rapidraker	Rapid Automatic Keyword Extraction (RAKE) Algorithm
2018-01-05	relSim	Relative Simulator
2018-01-05	remoter	Remote R: Control a Remote R Session from a Local One
2018-01-05	rmumps	Wrapper for MUMPS Library
2018-01-05	unitedR	Assessment and Evaluation of Formations in United
2018-01-05	walmartAPI	Walmart Open API Wrapper
2018-01-05	washdata	Urban Water and Sanitation Survey Dataset
2018-01-05	wavefunction	Wave Function Representation of Real Distributions
2018-01-04	afCEC	Active Function Cross-Entropy Clustering
2018-01-04	analogsea	Interface to 'Digital Ocean'
2018-01-04	bayesLopod	Bayesian Inference of Landscape Occupancy from Presence-Only Data
2018-01-04	DoseFinding	Planning and Analyzing Dose Finding Experiments
2018-01-04	fastrtext	'fastText' Wrapper for Text Classification and Word Representation
2018-01-04	fmdates	Financial Market Date Calculations
2018-01-04	GFD	Tests for General Factorial Designs
2018-01-04	gWidgets2RGtk2	Implementation of gWidgets2 for the RGtk2 Package
2018-01-04	ipft	Indoor Positioning Fingerprinting Toolset
2018-01-04	kstIO	Knowledge Space Theory Input/Output
2018-01-04	LCAvarsel	Variable Selection for Latent Class Analysis
2018-01-04	lhs	Latin Hypercube Samples
2018-01-04	memo	In-Memory Caching for Repeated Computations
2018-01-04	ngstk	Next-Generation Sequencing (NGS) Data Analysis Toolkit
2018-01-04	PCMRS	Model Response Styles in Partial Credit Models
2018-01-04	ppclust	Probabilistic and Possibilistic Cluster Analysis
2018-01-04	R.cache	Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
2018-01-04	rioja	Analysis of Quaternary Science Data
2018-01-04	rptR	Repeatability Estimation for Gaussian and Non-Gaussian Data
2018-01-04	SparseDC	Implementation of SparseDC Algorithm
2018-01-04	stacomiR	Fish Migration Monitoring
2018-01-04	tidystringdist	String Distance Calculation with Tidy Data Principles
2018-01-04	visvow	A Tool for the Visualization of Vowel Variation
2018-01-03	BinNonNor	Data Generation with Binary and Continuous Non-Normal Components
2018-01-03	Biolinv	Modelling and Forecasting Biological Invasions
2018-01-03	burnr	Fire-History Analysis in R
2018-01-03	CMplot	Circle Manhattan Plot
2018-01-03	discgolf	Discourse API Client
2018-01-03	ether	Interaction with the 'Ethereum' Blockchain
2018-01-03	ExtremeBounds	Extreme Bounds Analysis (EBA)
2018-01-03	frequencyConnectedness	Spectral Decomposition of Connectedness Measures
2018-01-03	hBayesDM	Hierarchical Bayesian Modeling of Decision-Making Tasks
2018-01-03	Hmisc	Harrell Miscellaneous
2018-01-03	httping	'Ping' 'URLs' to Time 'Requests'
2018-01-03	inctools	Incidence Estimation Tools
2018-01-03	macleish	Retrieve Data from MacLeish Field Station
2018-01-03	mekko	Variable Width Bar Charts: Bar Mekko
2018-01-03	miRNAss	Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
2018-01-03	mixlm	Mixed Model ANOVA and Statistics for Education
2018-01-03	mobForest	Model Based Random Forest Analysis
2018-01-03	naivebayes	High Performance Implementation of the Naive Bayes Algorithm
2018-01-03	oaxaca	Blinder-Oaxaca Decomposition
2018-01-03	odr	Optimal Design and Statistical Power of Multilevel Randomized Trials
2018-01-03	pangaear	Client for the 'Pangaea' Database
2018-01-03	PoisBinNonNor	Data Generation with Poisson, Binary and Continuous Components
2018-01-03	PoisBinOrd	Data Generation with Poisson, Binary and Ordinal Components
2018-01-03	qualvar	Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2018-01-03	reinforcelearn	Reinforcement Learning
2018-01-03	rprojroot	Finding Files in Project Subdirectories
2018-01-03	Rsampletrees	MCMC Sampling of Gene Genealogies Conditional on Genetic Data
2018-01-03	rsq	R-Squared and Related Measures
2018-01-03	searchConsoleR	Google Search Console R Client
2018-01-03	sofa	Connector to 'CouchDB'
2018-01-03	wbstats	Programmatic Access to Data and Statistics from the World Bank API
2018-01-03	woeR	Weight of Evidence Based Segmentation of a Variable
2018-01-03	wordcloud2	Create Word Cloud by 'htmlwidget'
2017-12-27	PBSmodelling	GUI Tools Made Easy: Interact with Models and Explore Data
2017-12-24	ciTools	Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
2017-12-23	addreg	Additive Regression for Discrete Data
2017-12-23	CytobankBridgeR	Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application
2017-12-22	conformalClassification	Transductive and Inductive Conformal Predictions for Classification Problems
2017-12-22	pKSEA	Prediction-Based Kinase-Substrate Enrichment Analysis
2017-12-22	spectacles	Storing, Manipulating and Analysis Spectroscopy and Associated Data
2017-12-21	alphashape3d	Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
2017-12-21	bdsmatrix	Routines for Block Diagonal Symmetric Matrices
2017-12-21	BullsEyeR	Topic Modelling
2017-12-21	fdcov	Analysis of Covariance Operators
2017-12-21	fractal	A Fractal Time Series Modeling and Analysis Package
2017-12-21	grapherator	A Modular Multi-Step Graph Generator
2017-12-21	OptSig	Optimal Level of Significance for Regression and Other Statistical Tests
2017-12-21	PBIBD	Partially Balanced Incomplete Block Designs
2017-12-21	RSocrata	Download or Upload 'Socrata' Data Sets
2017-12-21	samplesizeCMH	Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test
2017-12-21	seaaroundus	Sea Around Us API Wrapper
2017-12-21	simtimer	Datetimes as Integers for Discrete-Event Simulations
2017-12-21	sparseEigen	Computation of Sparse Eigenvectors of a Matrix
2017-12-21	swatches	Read, Inspect, and Manipulate Color Swatch Files
2017-12-21	TrioSGL	Trio Model with a Combination of Lasso and Group Lasso Regularization
2017-12-21	wikitaxa	Taxonomic Information from 'Wikipedia'
2017-12-20	bhm	Biomarker Threshold Models
2017-12-20	datoramar	Interface to the 'Datorama' API
2017-12-20	GAS	Generalized Autoregressive Score Models
2017-12-20	HMP	Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2017-12-20	inpdfr	Analyse Text Documents Using Ecological Tools
2017-12-20	kgc	Koeppen-Geiger Climatic Zones
2017-12-20	memisc	Management of Survey Data and Presentation of Analysis Results
2017-12-20	MonoPoly	Functions to Fit Monotone Polynomials
2017-12-20	nparACT	Non-Parametric Measures of Actigraphy Data
2017-12-20	OGI	Objective General Index
2017-12-20	picasso	Pathwise Calibrated Sparse Shooting Algorithm
2017-12-20	remotes	R Package Installation from Remote Repositories, Including 'GitHub'
2017-12-20	rxylib	Import XY-Data into R
2017-12-20	SimCop	Simulate from Arbitrary Copulae
2017-12-20	theseus	Analysis and Visualization Tools for Microbial Community Data
2017-12-20	widgetframe	'Htmlwidgets' in Responsive 'iframes'
2017-12-19	checkpoint	Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2017-12-19	deisotoper	Detection of Isotope Pattern of a Mass Spectrometric Measurement
2017-12-19	GeDS	Geometrically Designed Spline Regression
2017-12-19	iprior	Regression Modelling using I-Priors
2017-12-19	msde	Bayesian Inference for Multivariate Stochastic Differential Equations
2017-12-19	partitionComparison	Implements Measures for the Comparison of Two Partitions
2017-12-19	PathSelectMP	Backwards Variable Selection for Paths using M Plus
2017-12-19	quantregForest	Quantile Regression Forests
2017-12-19	reda	Recurrent Event Data Analysis
2017-12-19	rhmmer	Utilities Parsing 'HMMER' Results
2017-12-19	rhymer	Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
2017-12-19	tis	Time Indexes and Time Indexed Series
2017-12-19	tmbstan	MCMC Sampling from 'TMB' Model Object using 'Stan'
2017-12-19	ZOIP	ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
2017-12-18	adephylo	Exploratory Analyses for the Phylogenetic Comparative Method
2017-12-18	Canopy	Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
2017-12-18	kimisc	Kirill's Miscellaneous Functions
2017-12-18	mudfold	Multiple UniDimensional unFOLDing
2017-12-18	SpatialBall	Spatial NBA Visualization and Analysis
2017-12-18	textrank	Summarize Text by Ranking Sentences and Finding Keywords
2017-12-18	Umatrix	Visualization of Structures in High-Dimensional Data
2017-12-17	AmesHousing	The Ames Iowa Housing Data
2017-12-17	CoClust	Copula Based Cluster Analysis
2017-12-17	fdasrvf	Elastic Functional Data Analysis
2017-12-17	FreeSortR	Free Sorting Data Analysis
2017-12-17	mlapi	Abstract Classes for Building 'scikit-learn' Like API
2017-12-17	PKPDmisc	Pharmacokinetic and Pharmacodynamic Data Management Functions
2017-12-17	SegCorr	Detecting Correlated Genomic Regions
2017-12-17	stringformattr	Dynamic String Formatting
2017-12-17	SyncRNG	A Synchronized Tausworthe RNG for R and Python
2017-12-17	zonator	Utilities for Zonation Spatial Conservation Prioritization Software
2017-12-16	cleanEHR	The Critical Care Clinical Data Processing Tools
2017-12-16	diveMove	Dive Analysis and Calibration
2017-12-16	drat	'Drat' R Archive Template
2017-12-16	gofastr	Fast DocumentTermMatrix and TermDocumentMatrix Creation
2017-12-16	hunspell	High-Performance Stemmer, Tokenizer, and Spell Checker
2017-12-16	multiplex	Algebraic Tools for the Analysis of Multiple Social Networks
2017-12-15	astsa	Applied Statistical Time Series Analysis
2017-12-15	BClustLonG	A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
2017-12-15	bioinactivation	Simulation of Dynamic Microbial Inactivation
2017-12-15	BisRNA	Analysis of RNA Cytosine-5 Methylation
2017-12-15	cit	Causal Inference Test
2017-12-15	clustEff	Clusters of Effects Curves in Quantile Regression Models
2017-12-15	ecp	Non-Parametric Multiple Change-Point Analysis of Multivariate Data
2017-12-15	EMSC	Extended Multiplicative Signal Correction
2017-12-15	GMAC	Genomic Mediation Analysis with Adaptive Confounding Adjustment
2017-12-15	hypercube	Organizing Data in a Hypercube
2017-12-15	irtoys	A Collection of Functions Related to Item Response Theory (IRT)
2017-12-15	plsVarSel	Variable Selection in Partial Least Squares
2017-12-15	quantregRanger	Quantile Regression Forests for 'ranger'
2017-12-14	clickstream	Analyzes Clickstreams Based on Markov Chains
2017-12-14	elo	Elo Ratings
2017-12-14	gravity	Estimation Methods for Gravity Models
2017-12-14	humanleague	Synthetic Population Generator
2017-12-14	PooledMeanGroup	Pooled Mean Group Estimation of Dynamic Heterogenous Panels
2017-12-14	RSNPset	Efficient Score Statistics for Genome-Wide SNP Set Analysis
2017-12-14	spAddins	A Set of RStudio Addins
2017-12-14	spatgraphs	Graph Edge Computations for Spatial Point Patterns
2017-12-14	sRDA	Sparse Redundancy Analysis
2017-12-14	stopwords	Multilingual Stopword Lists
2017-12-14	submax	Effect Modification in Observational Studies Using the Submax Method
2017-12-14	syuzhet	Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
2017-12-14	tweedie	Evaluation of Tweedie Exponential Family Models
2017-12-13	backports	Reimplementations of Functions Introduced Since R-3.0.0
2017-12-13	binaryLogic	Binary Logic
2017-12-13	doSNOW	Foreach Parallel Adaptor for the 'snow' Package
2017-12-13	GJRM	Generalised Joint Regression Modelling
2017-12-13	hysteresis	Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
2017-12-13	LAGOSNE	Interface to the Lake Multi-Scaled Geospatial and Temporal Database
2017-12-13	lexRankr	Extractive Summarization of Text with the LexRank Algorithm
2017-12-13	libcoin	Linear Test Statistics for Permutation Inference
2017-12-13	POPdemog	Plot Population Demographic History
2017-12-13	SensoMineR	Sensory Data Analysis
2017-12-13	testthat	Unit Testing for R
2017-12-12	ChemoSpec	Exploratory Chemometrics for Spectroscopy
2017-12-12	control	A Control Systems Toolbox
2017-12-12	corpus	Text Corpus Analysis
2017-12-12	doMC	Foreach Parallel Adaptor for 'parallel'
2017-12-12	foreach	Provides Foreach Looping Construct for R
2017-12-12	fsdaR	Robust Data Analysis Through Monitoring and Dynamic Visualization
2017-12-12	iMRMC	Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics)
2017-12-12	inum	Interval and Enum-Type Representation of Vectors
2017-12-12	jagsUI	A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2017-12-12	mazealls	Generate Recursive Mazes
2017-12-12	mmapcharr	Memory-Map Character Files
2017-12-12	NanoStringNorm	Normalize NanoString miRNA and mRNA Data
2017-12-12	numform	Tools to Format Numbers for Publication
2017-12-12	prettycode	Pretty Print R Code in the Terminal
2017-12-12	Rnets	Resistance Relationship Networks using Graphical LASSO
2017-12-12	secrlinear	Spatially Explicit Capture-Recapture for Linear Habitats
2017-12-12	sets	Sets, Generalized Sets, Customizable Sets and Intervals
2017-12-12	textreadr	Read Text Documents into R
2017-12-12	XiMpLe	A Simple XML Tree Parser and Generator
2017-12-11	ECharts2Shiny	Embedding Interactive Charts Generated with ECharts Library into Shiny Applications
2017-12-11	filling	Matrix Completion, Imputation, and Inpainting Methods
2017-12-11	fitteR	Fit Hundreds of Theoretical Distributions to Empirical Data
2017-12-11	isoph	Isotonic Proportional Hazards Model
2017-12-11	junr	Access Open Data Through the 'Junar' API
2017-12-11	minimaxdesign	Minimax and Minimax Projection Designs
2017-12-11	nnfor	Time Series Forecasting with Neural Networks
2017-12-11	OpenMPController	Control Number of OpenMP Threads Dynamically
2017-12-11	reshape2	Flexibly Reshape Data: A Reboot of the Reshape Package
2017-12-11	snplist	Tools to Create Gene Sets
2017-12-11	survivalMPL	Penalised Maximum Likelihood for Survival Analysis Models
2017-12-10	dynCorr	Dynamic Correlation Package
2017-12-10	ESTER	Efficient Sequential Testing with Evidence Ratios
2017-12-10	JMcmprsk	Joint Models for Longitudinal Measurements and Competing Risks Failure Time Data
2017-12-10	KenSyn	Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis
2017-12-10	phylotools	Phylogenetic Tools for Eco-Phylogenetics
2017-12-10	refset	Subsets with Reference Semantics
2017-12-09	lifecontingencies	Financial and Actuarial Mathematics for Life Contingencies
2017-12-09	parsemsf	Parse ThermoFisher MSF Files and Estimate Protein Abundances
2017-12-08	iheatmapr	Interactive, Complex Heatmaps
2017-12-08	NetworkDistance	Distance Measures for Networks
2017-12-08	penaltyLearning	Penalty Learning
2017-12-08	randomcoloR	Generate Attractive Random Colors
2017-12-08	rsvd	Randomized Singular Value Decomposition
2017-12-08	snowflakes	Random Snowflake Generator
2017-12-08	WARN	Weaning Age Reconstruction with Nitrogen Isotope Analysis
2017-12-08	xray	X Ray Vision on your Datasets
2017-12-07	controlTest	Quantile Comparison for Two-Sample Right-Censored Survival Data
2017-12-07	DOBAD	Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains
2017-12-07	LabourMarketAreas	Identification, Tuning, Visualisation and Analysis of Labour Market Areas
2017-12-07	MazamaSpatialUtils	Spatial Data Download and Utility Functions
2017-12-07	MMDai	Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Data
2017-12-07	sampleSelection	Sample Selection Models
2017-12-06	CPMCGLM	Correction of the P-Value after Multiple Coding in Generalized Linear Models
2017-12-06	earlyR	Estimation of Transmissibility in the Early Stages of a Disease Outbreak
2017-12-06	flipscores	Robust Testing in GLMs
2017-12-06	geniusr	Tools for Working with the 'Genius' API
2017-12-06	gTests	Graph-Based Two-Sample Tests
2017-12-06	Inventorymodel	Inventory Models
2017-12-06	ISM	Interpretive Structural Modelling (ISM)
2017-12-06	LassoSIR	Sparsed Sliced Inverse Regression via Lasso
2017-12-06	MazamaWebUtils	Utility Functions for Building Web Databrowsers
2017-12-06	MetamapsDB	Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics
2017-12-06	metasens	Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis
2017-12-06	PSLM2015	Pakistan Social and Living Standards Measurement Survey 2014-15
2017-12-06	TriMatch	Propensity Score Matching of Non-Binary Treatments
2017-12-06	vcd	Visualizing Categorical Data
2017-12-06	wmtsa	Wavelet Methods for Time Series Analysis
2017-12-05	CaDENCE	Conditional Density Estimation Network Construction and Evaluation
2017-12-05	deGradInfer	Parameter Inference for Systems of Differential Equation
2017-12-05	GEVcdn	GEV Conditional Density Estimation Network
2017-12-05	ghibli	Studio Ghibli Palette Generator
2017-12-05	HMMEsolver	A Fast Solver for Henderson Mixed Model Equation via Row Operations
2017-12-05	lg	Locally Gaussian Distributions: Estimation and Methods
2017-12-05	mmpf	Monte-Carlo Methods for Prediction Functions
2017-12-05	monmlp	Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints
2017-12-05	ordinalNet	Penalized Ordinal Regression
2017-12-05	plotrr	Making Visual Exploratory Data Analysis with Nested Data Easier
2017-12-05	R2BayesX	Estimate Structured Additive Regression Models with 'BayesX'
2017-12-05	scatr	Create Scatter Plots with Marginal Density or Box Plots
2017-12-05	secrdesign	Sampling Design for Spatially Explicit Capture-Recapture
2017-12-05	sptm	SemiParametric Transformation Model Methods
2017-12-05	x12	Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment
2017-12-04	BayesVarSel	Bayes Factors, Model Choice and Variable Selection in Linear Models
2017-12-04	CollapseLevels	Collapses Levels, Computes Information Value and WoE
2017-12-04	combiter	Combinatorics Iterators
2017-12-04	easyVerification	Ensemble Forecast Verification for Large Data Sets
2017-12-04	flora	Tools for Interacting with the Brazilian Flora 2020
2017-12-04	GRS.test	GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation
2017-12-04	loa	Lattice Options and Add-Ins
2017-12-04	mazeGen	Elithorn Maze Generator
2017-12-04	mdw	Maximum Diversity Weighting
2017-12-04	mutoss	Unified Multiple Testing Procedures
2017-12-04	mutossGUI	A Graphical User Interface for the MuToss Project
2017-12-04	networkGen	Network Maze Generator
2017-12-04	OSTSC	Over Sampling for Time Series Classification
2017-12-04	parallelDist	Parallel Distance Matrix Computation using Multiple Threads
2017-12-04	restriktor	Restricted Statistical Estimation and Inference for Linear Models
2017-12-04	ROptSpace	Matrix Reconstruction from a Few Entries
2017-12-04	striprtf	Extract Text from RTF File
2017-12-04	xesreadR	Read and Write XES Files
2017-12-03	Factoshiny	Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
2017-12-03	hesim	Health-Economic Simulation Modeling and Decision Analysis
2017-12-03	registry	Infrastructure for R Package Registries
2017-12-03	robustrank	Robust Rank-Based Tests
2017-12-02	EAinference	Estimator Augmentation and Simulation-Based Inference
2017-12-02	generalhoslem	Goodness of Fit Tests for Logistic Regression Models
2017-12-02	phyclust	Phylogenetic Clustering (Phyloclustering)
2017-12-02	ROI.models.globalOptTests	'ROI' Optimization Problems Based on 'globalOptTests'
2017-12-01	findpython	Functions to Find an Acceptable Python Binary
2017-12-01	geosapi	GeoServer REST API R Interface
2017-12-01	harrietr	Wrangle Phylogenetic Distance Matrices and Other Utilities
2017-12-01	lrgs	Linear Regression by Gibbs Sampling
2017-12-01	NestedCategBayesImpute	Modeling and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations
2017-12-01	Numero	Statistical Framework to Define Subgroups in Complex Datasets
2017-12-01	RDS	Respondent-Driven Sampling
2017-12-01	vegan3d	Static and Dynamic 3D Plots for the 'vegan' Package
2017-12-01	velox	Fast Raster Manipulation and Extraction
2017-12-01	whereport	Geolocalization of IATA Codes
2017-11-30	adapr	Implementation of an Accountable Data Analysis Process
2017-11-30	BatchExperiments	Statistical Experiments on Batch Computing Clusters
2017-11-30	bucky	Bucky's Archive for Data Analysis in the Social Sciences
2017-11-30	clusterSim	Searching for Optimal Clustering Procedure for a Data Set
2017-11-30	goftte	Goodness-of-Fit for Time-to-Event Data
2017-11-30	npregfast	Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions
2017-11-30	passport	Travel Smoothly Between Country Name and Code Formats
2017-11-30	SASmarkdown	'SAS' Markdown
2017-11-30	segmented	Regression Models with Break-Points / Change-Points Estimation
2017-11-30	Thermimage	Thermal Image Analysis
2017-11-30	TotalCopheneticIndex	Total Cophenetic Index: An R Package to Quantify Tree Balance
2017-11-29	lmomPi	(Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom'
2017-11-29	MUS	Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing
2017-11-29	StrainRanking	Ranking of Pathogen Strains
2017-11-29	streambugs	Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa
2017-11-29	webshot	Take Screenshots of Web Pages
2017-11-28	adehabitatHR	Home Range Estimation
2017-11-28	adehabitatHS	Analysis of Habitat Selection by Animals
2017-11-28	adehabitatMA	Tools to Deal with Raster Maps
2017-11-28	ANN2	Artificial Neural Networks for Anomaly Detection
2017-11-28	BatchJobs	Batch Computing with R
2017-11-28	coin	Conditional Inference Procedures in a Permutation Test Framework
2017-11-28	Dforest	Decision Forest
2017-11-28	GetHFData	Download and Aggregate High Frequency Trading Data from Bovespa
2017-11-28	jointseg	Joint Segmentation of Multivariate (Copy Number) Signals
2017-11-28	plantecophys	Modelling and Analysis of Leaf Gas Exchange Data
2017-11-28	Sim.DiffProc	Simulation of Diffusion Processes
2017-11-28	Sim.PLFN	Simulation of Piecewise Linear Fuzzy Numbers
2017-11-28	tipr	Tipping Point Analyses
2017-11-28	xltabr	Automatically Write Beautifully Formatted Cross Tabulations/Contingency Tables to Excel
2017-11-27	ceg	Chain Event Graph
2017-11-27	EvolutionaryGames	Important Concepts of Evolutionary Game Theory
2017-11-27	gap.datasets	Datasets for 'gap'
2017-11-27	odk	Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
2017-11-27	phase1RMD	Repeated Measurement Design for Phase I Clinical Trial
2017-11-27	simEd	Simulation Education
2017-11-27	skeleSim	Genetic Simulation Engine
2017-11-27	texteffect	Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects
2017-11-27	trackeR	Infrastructure for Running and Cycling Data from GPS-Enabled Tracking Devices
2017-11-27	voteogram	United States House and Senate Voting Cartogram Generators
2017-11-26	EKMCMC	MCMC Procedures for Estimating Enzyme Kinetics Constants
2017-11-26	intrinsicDimension	Intrinsic Dimension Estimation
2017-11-26	RAPTOR	Row and Position Tracheid Organizer
2017-11-26	RNiftyReg	Image Registration Using the 'NiftyReg' Library
2017-11-26	shinyaframe	'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame'
2017-11-26	wordnet	WordNet Interface
2017-11-25	commonsMath	JAR Files of the Apache Commons Mathematics Library
2017-11-25	jmcm	Joint Mean-Covariance Models using 'Armadillo' and S4
2017-11-25	scriptexec	Execute Native Scripts
2017-11-24	Aoptbdtvc	A-Optimal Block Designs for Comparing Test Treatments with Controls
2017-11-24	cctools	Tools for the Continuous Convolution Trick in Nonparametric Estimation
2017-11-24	dixon	Nearest Neighbour Contingency Table Analysis
2017-11-24	galts	Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation
2017-11-24	inferference	Methods for Causal Inference with Interference
2017-11-24	replicatedpp2w	Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
2017-11-24	Rramas	Matrix Population Models
2017-11-24	tgram	Compute and Plot Tracheidograms
2017-11-24	ThresholdROC	Threshold Estimation
2017-11-24	tscount	Analysis of Count Time Series
2017-11-24	unitizer	Interactive R Unit Tests
2017-11-23	adjustedcranlogs	Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs
2017-11-23	CopulaDTA	Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies
2017-11-23	CorporaCoCo	Corpora Co-Occurrence Comparison
2017-11-23	distcrete	Discrete Distribution Approximations
2017-11-23	IDCard	Update Chinese ID Card Number to Eighteen Digits
2017-11-23	lawstat	Tools for Biostatistics, Public Policy, and Law
2017-11-23	MHTdiscrete	Multiple Hypotheses Testing for Discrete Data
2017-11-23	powdist	Power and Reversal Power Distributions
2017-11-23	TempleMetrics	Estimating Conditional Distributions
2017-11-22	domino	R Console Bindings for the 'Domino Command-Line Client'
2017-11-22	DVHmetrics	Analyze Dose-Volume Histograms and Check Constraints
2017-11-22	dyads	Dyadic Network Analysis
2017-11-22	fpmoutliers	Frequent Pattern Mining Outliers
2017-11-22	futility	Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up
2017-11-22	KMgene	Gene-Based Association Analysis for Complex Traits
2017-11-22	LCF	Linear Combination Fitting
2017-11-22	ManifoldOptim	An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization
2017-11-22	RLumModel	Solving Ordinary Differential Equations to Understand Luminescence
2017-11-22	SELF	A Structural Equation Embedded Likelihood Framework for Causal Discovery
2017-11-22	survClip	Survival Analysis for Pathways
2017-11-21	biofiles	An Interface for GenBank/GenPept Flat Files
2017-11-21	epicontacts	Handling, Visualisation and Analysis of Epidemiological Contacts
2017-11-21	ICRanks	Simultaneous Confidence Intervals for Ranks
2017-11-21	multichull	A Generic Convex-Hull-Based Model Selection Method
2017-11-21	ngram	Fast n-Gram 'Tokenization'
2017-11-21	ragt2ridges	Ridge Estimation of Vector Auto-Regressive (VAR) Processes
2017-11-21	RcppHMM	Rcpp Hidden Markov Model
2017-11-21	RcppTN	Rcpp-Based Truncated Normal Distribution RNG and Family
2017-11-21	rsed	Stream Editing
2017-11-21	Smisc	Sego Miscellaneous
2017-11-20	bang	Bayesian Analysis, No Gibbs
2017-11-20	basad	Bayesian Variable Selection with Shrinking and Diffusing Priors
2017-11-20	carx	Censored Autoregressive Model with Exogenous Covariates
2017-11-20	CommEcol	Community Ecology Analyses
2017-11-20	Countr	Flexible Univariate Count Models Based on Renewal Processes
2017-11-20	covafillr	Local Polynomial Regression of State Dependent Covariates in State-Space Models
2017-11-20	fImport	Rmetrics - Importing Economic and Financial Data
2017-11-20	gcdnet	LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm
2017-11-20	LaF	Fast Access to Large ASCII Files
2017-11-20	longROC	Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores
2017-11-20	LPKsample	LP Nonparametric High Dimension K-Sample Comparison
2017-11-20	siland	Spatial Influence of Landscape
2017-11-20	tm.plugin.factiva	Import Articles from 'Factiva' Using the 'tm' Text Mining Framework
2017-11-19	AWR.Athena	'AWS' Athena 'DBI' Wrapper
2017-11-19	reglogit	Simulation-Based Regularized Logistic Regression
2017-11-19	wicket	Utilities to Handle WKT Spatial Data
2017-11-18	easyAHP	Analytic Hierarchy Process (AHP)
2017-11-18	flowDiv	Cytometric Diversity Indices from Gated Data
2017-11-18	RcppHoney	Iterator Based Expression Template Expansion of Standard Operators
2017-11-18	xslt	Extensible Style-Sheet Language Transformations
2017-11-17	ArchaeoChron	Bayesian Modeling of Archaeological Chronologies
2017-11-17	bnspatial	Spatial Implementation of Bayesian Networks and Mapping
2017-11-17	extremefit	Estimation of Extreme Conditional Quantiles and Probabilities
2017-11-17	fAsianOptions	Rmetrics - EBM and Asian Option Valuation
2017-11-17	fBasics	Rmetrics - Markets and Basic Statistics
2017-11-17	fExoticOptions	Rmetrics - Pricing and Evaluating Exotic Option
2017-11-17	fExtremes	Rmetrics - Modelling Extreme Events in Finance
2017-11-17	gamreg	Robust and Sparse Regression via Gamma-Divergence
2017-11-17	googleCloudStorageR	Interface with Google Cloud Storage API
2017-11-17	imfr	Download Data from the International Monetary Fund's Data API
2017-11-17	logihist	Combined Graphs for Logistic Regression
2017-11-17	mldr.datasets	R Ultimate Multilabel Dataset Repository
2017-11-17	mpmcorrelogram	Multivariate Partial Mantel Correlogram
2017-11-17	ores	Connector to the Objective Revision Evaluation Service (ORES)
2017-11-17	proPubBills	'ProPublica' U.S. Congress Bills API Wrapper
2017-11-17	queuecomputer	Computationally Efficient Queue Simulation
2017-11-17	Relatedness	Maximum Likelihood Estimation of Relatedness using EM Algorithm
2017-11-17	revgeo	Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing
2017-11-17	RHawkes	Renewal Hawkes Process
2017-11-17	sparkavro	Load Avro File into 'Apache Spark'
2017-11-17	spiderbar	Parse and Test Robots Exclusion Protocol Files and Rules
2017-11-17	spotifyr	Pull Track Audio Features from the 'Spotify' Web API
2017-11-17	sppmix	Modeling Spatial Poisson and Related Point Processes
2017-11-17	timeSeries	Rmetrics - Financial Time Series Objects
2017-11-17	YPInterimTesting	Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials
2017-11-16	dequer	Stacks, Queues, and 'Deques' for R
2017-11-16	easyanova	Analysis of Variance and Other Important Complementary Analyses
2017-11-16	epr	Easy Polynomial Regression
2017-11-16	fAssets	Rmetrics - Analysing and Modelling Financial Assets
2017-11-16	fCopulae	Rmetrics - Bivariate Dependence Structures with Copulae
2017-11-16	fGarch	Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
2017-11-16	flatr	Transforms Contingency Tables to Data Frames, and Analyses Them
2017-11-16	fMultivar	Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions
2017-11-16	fNonlinear	Rmetrics - Nonlinear and Chaotic Time Series Modelling
2017-11-16	fOptions	Rmetrics - Pricing and Evaluating Basic Options
2017-11-16	fPortfolio	Rmetrics - Portfolio Selection and Optimization
2017-11-16	fUnitRoots	Rmetrics - Modelling Trends and Unit Roots
2017-11-16	hashmap	The Faster Hash Map
2017-11-16	MixedPsy	Statistical Tools for the Analysis of Psychophysical Data
2017-11-16	modest	Model-Based Dose-Escalation Trials
2017-11-16	Myrrix	Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable Clustering and Recommender System, Evolved from Apache Mahout
2017-11-16	Myrrixjars	R/Myrrix Interface Jars
2017-11-16	PtProcess	Time Dependent Point Process Modelling
2017-11-16	SequentialDesign	Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data
2017-11-16	taskscheduleR	Schedule R Scripts and Processes with the Windows Task Scheduler
2017-11-16	texmex	Statistical Modelling of Extreme Values
2017-11-16	thregI	Threshold Regression for Interval-Censored Data with a Cure Rate Option
2017-11-16	utility	Construct, Evaluate and Plot Value and Utility Functions
2017-11-15	easynls	Easy Nonlinear Model
2017-11-15	EurosarcBayes	Bayesian Single Arm Sample Size Calculation Software
2017-11-15	fBonds	Rmetrics - Pricing and Evaluating Bonds
2017-11-15	fRegression	Rmetrics - Regression Based Decision and Prediction
2017-11-15	fTrading	Rmetrics - Trading and Rebalancing Financial Instruments
2017-11-15	icensBKL	Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre
2017-11-15	IQCC	Improved Quality Control Charts
2017-11-15	logmult	Log-Multiplicative Models, Including Association Models
2017-11-15	rpicosat	R Bindings for the 'PicoSAT' SAT Solver
2017-11-14	cdcfluview	Retrieve 'U.S'. Flu Season Data from the 'CDC' 'FluView' Portal
2017-11-14	coop	Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
2017-11-14	dataCompareR	Compare Two Data Frames and Summarise the Difference
2017-11-14	dynsurv	Dynamic Models for Survival Data
2017-11-14	ICCbin	Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data
2017-11-14	L1pack	Routines for L1 Estimation
2017-11-14	likelihoodExplore	Likelihood Exploration
2017-11-14	oaqc	Computation of the Orbit-Aware Quad Census
2017-11-14	OptimalTiming	Optimal Timing Identification
2017-11-14	subsamp	Subsample Winner Algorithm for Variable Selection in Linear Regression with a Large Number of Variables
2017-11-14	systemicrisk	A Toolbox for Systemic Risk
2017-11-14	tidyposterior	Bayesian Analysis to Compare Models using Resampling Statistics
2017-11-14	tidyverse	Easily Install and Load the 'Tidyverse'
2017-11-14	variosig	Spatial Dependence Based on Empirical Variograms
2017-11-13	auctestr	Statistical Testing for AUC Data
2017-11-13	Bergm	Bayesian Exponential Random Graph Models
2017-11-13	bootcluster	Bootstrapping Estimates of Clustering Stability
2017-11-13	CHNOSZ	Thermodynamic Calculations for Geobiochemistry
2017-11-13	Dasst	Tools for Reading, Processing and Writing 'DSSAT' Files
2017-11-13	dparser	Port of 'Dparser' Package
2017-11-13	episensr	Basic Sensitivity Analysis of Epidemiological Results
2017-11-13	OneArmPhaseTwoStudy	Planning, Conducting, and Analysing Single-Arm Phase II Studies
2017-11-13	QuantumClone	Clustering Mutations using High Throughput Sequencing (HTS) Data
2017-11-13	raster	Geographic Data Analysis and Modeling
2017-11-13	rethinker	RethinkDB Client
2017-11-13	StakeholderAnalysis	Measuring Stakeholder Influence
2017-11-13	ToolsForCoDa	Multivariate Tools for Compositional Data Analysis
2017-11-12	ggplotAssist	'RStudio' Addin for Teaching and Learning 'ggplot2'
2017-11-12	nat	NeuroAnatomy Toolbox for Analysis of 3D Image Data
2017-11-12	openNLPdata	Apache OpenNLP Jars and Basic English Language Models
2017-11-12	phytools	Phylogenetic Tools for Comparative Biology (and Other Things)
2017-11-12	qboxplot	Quantile-Based Boxplot
2017-11-12	rcbalance	Large, Sparse Optimal Matching with Refined Covariate Balance
2017-11-12	RKEAjars	R/KEA Interface Jars
2017-11-12	rsample	General Resampling Infrastructure
2017-11-12	snnR	Sparse Neural Networks for Genomic Selection in Animal Breeding
2017-11-12	ThankYouStars	Give your Dependencies Stars on GitHub!
2017-11-12	yardstick	Tidy Characterizations of Model Performance
2017-11-11	BatchMap	Software for the Creation of High Density Linkage Maps in Outcrossing Species
2017-11-10	AID	Box-Cox Power Transformation
2017-11-10	anocva	A Non-Parametric Statistical Test to Compare Clustering Structures
2017-11-10	climwin	Climate Window Analysis
2017-11-10	Crossover	Analysis and Search of Crossover Designs
2017-11-10	ctmle	Collaborative Targeted Maximum Likelihood Estimation
2017-11-10	memuse	Memory Estimation Utilities
2017-11-10	parSim	Parallel Simulation Studies
2017-11-10	PdPDB	Pattern Discovery in PDB Structures of Metalloproteins
2017-11-10	quokar	Quantile Regression Outlier Diagnostics with K Left Out Analysis
2017-11-10	rGoodData	GoodData API Client Package
2017-11-10	rLDCP	Text Generation from Data
2017-11-10	rODE	Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes
2017-11-10	sound	A Sound Interface for R
2017-11-10	StAMPP	Statistical Analysis of Mixed Ploidy Populations
2017-11-09	bigtime	Sparse Estimation of Large Time Series Models
2017-11-09	cjoint	AMCE Estimator for Conjoint Experiments
2017-11-09	famSKATRC	Family Sequence Kernel Association Test for Rare and Common Variants
2017-11-09	MOST	Multiphase Optimization Strategy
2017-11-09	nesRdata	National Eutrophication Survey Data
2017-11-09	predkmeans	Covariate Adaptive Clustering
2017-11-09	roccv	ROC for Cross Validation Results
2017-11-09	rWishart	Random Wishart Matrix Generation
2017-11-09	wNNSel	Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables
2017-11-08	condusco	Query-Driven Pipeline Execution and Query Templates
2017-11-08	deepboost	Deep Boosting Ensemble Modeling
2017-11-08	FHtest	Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
2017-11-08	geojson	Classes for 'GeoJSON'
2017-11-08	graphon	A Collection of Graphon Estimation Methods
2017-11-08	intsvy	International Assessment Data Manager
2017-11-08	lintr	A 'Linter' for R Code
2017-11-08	lsl	Latent Structure Learning
2017-11-08	multcomp	Simultaneous Inference in General Parametric Models
2017-11-08	RcmdrPlugin.GWRM	R Commander Plug-in for Fitting Generalized Waring Regression Models
2017-11-08	REndo	Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables
2017-11-07	APCanalysis	Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
2017-11-07	changepointsHD	Change-Point Estimation for Expensive and High-Dimensional Models
2017-11-07	ClinicalTrialSummary	Summary Measures for Clinical Trials with Survival Outcomes
2017-11-07	EmpiricalCalibration	Routines for Performing Empirical Calibration of Observational Study Estimates
2017-11-07	epxToR	Import 'Epidata' XML Files '.epx'
2017-11-07	hues	Distinct Colours Palettes Based on 'iwanthue'
2017-11-07	move	Visualizing and Analyzing Animal Track Data
2017-11-07	pcnetmeta	Patient-Centered Network Meta-Analysis
2017-11-07	plm	Linear Models for Panel Data
2017-11-07	RadOnc	Analytical Tools for Radiation Oncology
2017-11-07	Rsymphony	SYMPHONY in R
2017-11-07	UniIsoRegression	Unimodal and Isotonic L1, L2 and Linf Regression
2017-11-06	ABCoptim	Implementation of Artificial Bee Colony (ABC) Optimization
2017-11-06	dcminfo	Information Matrix for Diagnostic Classification Models
2017-11-06	Diderot	Bibliographic Network Analysis
2017-11-06	genoPlotR	Plot Publication-Grade Gene and Genome Maps
2017-11-06	goft	Tests of Fit for some Probability Distributions
2017-11-06	googlePublicData	Working with Google's 'Public Data Explorer' DSPL Metadata Files
2017-11-06	pCalibrate	Bayesian Calibrations of P-Values
2017-11-06	RcppQuantuccia	R Bindings to the 'Quantuccia' Header-Only Essentials of 'QuantLib'
2017-11-05	approxmatch	Approximately Optimal Fine Balance Matching with Multiple Groups
2017-11-05	ArCo	Artificial Counterfactual Package
2017-11-05	cli	Helpers for Developing Command Line Interfaces
2017-11-05	extremeStat	Extreme Value Statistics and Quantile Estimation
2017-11-05	geosphere	Spherical Trigonometry
2017-11-05	lplyr	'dplyr' Verbs for Lists and Other Verbs for Data Frames
2017-11-05	nomine	Classify Names by Gender, U.S. Ethnicity, and Leaf Nationality
2017-11-05	Pstat	Assessing Pst Statistics
2017-11-05	tableHTML	A Tool to Create HTML Tables
2017-11-04	inaparc	Initialization Algorithms for Partitioning Cluster Analysis
2017-11-03	AnnuityRIR	Annuity Random Interest Rates
2017-11-03	convoSPAT	Convolution-Based Nonstationary Spatial Modeling
2017-11-03	dief	Metrics for Continuous Efficiency
2017-11-03	moveVis	Movement Data Visualization
2017-11-03	movMF	Mixtures of von Mises-Fisher Distributions
2017-11-03	mRMRe	Parallelized Minimum Redundancy, Maximum Relevance (mRMR) Ensemble Feature Selection
2017-11-03	PDN	Personalized Disease Network
2017-11-03	predatory	Tools for Detecting Predatory Publishers and Journals
2017-11-03	spew	SPEW Framework for Generating Synthetic Ecosystems
2017-11-03	StepReg	Stepwise Regression Analysis
2017-11-03	topicmodels	Topic Models
2017-11-03	vmd	Variational Mode Decomposition
2017-11-02	DatAssim	Data Assimilation
2017-11-02	equateMultiple	Equating of Multiple Forms
2017-11-02	FFTrees	Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
2017-11-02	l2boost	Friedman's Boosting Algorithm for Regularized Linear Regression
2017-11-02	mda	Mixture and Flexible Discriminant Analysis
2017-11-02	mobsim	Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes
2017-11-02	nopp	Nash Optimal Party Positions
2017-11-02	pglm	Panel Generalized Linear Models
2017-11-02	readobj	Fast Reader for 'Wavefront' OBJ 3D Scene Files
2017-11-02	rhub	Connect to 'R-hub'
2017-11-02	RJSplot	Interactive Graphs with R
2017-11-02	SLDAssay	Software for Analyzing Limiting Dilution Assays
2017-11-02	slowraker	A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm
2017-11-02	solrium	General Purpose R Interface to 'Solr'
2017-11-02	Taxonstand	Taxonomic Standardization of Plant Species Names
2017-11-01	HiddenMarkov	Hidden Markov Models
2017-11-01	infraFDTD.assist	IO Help for infraFDTD Model
2017-11-01	multigraph	Plot and Manipulate Multigraphs
2017-11-01	PanJen	A Semi-Parametric Test for Specifying Functional Form
2017-11-01	Rcrawler	Web Crawler and Scraper
2017-11-01	unittest	TAP-Compliant Unit Testing
2017-10-31	gapminder	Data from Gapminder
2017-10-31	lpme	Nonparametric Estimation of Measurement Error Models
2017-10-31	metricTester	Test Metric and Null Model Statistical Performance
2017-10-31	wec	Weighted Effect Coding
2017-10-30	abe	Augmented Backward Elimination
2017-10-30	bbmle	Tools for General Maximum Likelihood Estimation
2017-10-30	coala	A Framework for Coalescent Simulation
2017-10-30	conover.test	Conover-Iman Test of Multiple Comparisons Using Rank Sums
2017-10-30	dodgr	Distances on Directed Graphs
2017-10-30	dynfrail	Fitting Dynamic Frailty Models with the EM Algorithm
2017-10-30	flan	FLuctuation ANalysis on Mutation Models
2017-10-30	MBHdesign	Spatial Designs for Ecological and Environmental Surveys
2017-10-30	n1qn1	Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization
2017-10-30	phylocanvas	Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library
2017-10-30	R2admb	'ADMB' to R Interface Functions
2017-10-30	Rduino	A Microcontroller Interface
2017-10-30	rsurfer	Manipulating 'Freesurfer' Generated Data
2017-10-30	shadowtext	Shadow Text Grob and Layer
2017-10-29	episode	Estimation with Penalisation in Systems of Ordinary Differential Equations
2017-10-29	gridSVG	Export 'grid' Graphics as SVG
2017-10-29	HMMoce	Improved Analysis of Marine Animal Movement Data Using Hidden Markov Models
2017-10-29	lazyeval	Lazy (Non-Standard) Evaluation
2017-10-29	linl	'linl' is not 'Letter'
2017-10-29	rgen	Random Sampling Distribution C++ Routines for Armadillo
2017-10-29	rpg	Easy Interface to Advanced PostgreSQL Features
2017-10-29	spgwr	Geographically Weighted Regression
2017-10-29	SurrogateTest	Early Testing for a Treatment Effect using Surrogate Marker Information
2017-10-29	websearchr	Access Domains and Search Popular Websites
2017-10-28	coppeCosenzaR	COPPE-Cosenza Fuzzy Hierarchy Model
2017-10-28	Evapotranspiration	Modelling Actual, Potential and Reference Crop Evapotranspiration
2017-10-28	nets	Network Estimation for Time Series
2017-10-28	sinew	Create 'roxygen2' Skeleton with Information from Function Script
2017-10-27	distdrawr	Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database
2017-10-27	dunn.test	Dunn's Test of Multiple Comparisons Using Rank Sums
2017-10-27	pixels	Tools for Working with Image Pixels
2017-10-27	rcreds	Securely Use Credentials Within R Scripts
2017-10-27	vfcp	Computation of v Values for U and Copula C(U, v)
2017-10-26	BTLLasso	Modelling Heterogeneity in Paired Comparison Data
2017-10-26	catnet	Categorical Bayesian Network Inference
2017-10-26	census	Scrape US Census Data
2017-10-26	countyfloods	Quantify United States County-Level Flood Measurements
2017-10-26	epitools	Epidemiology Tools
2017-10-26	fiery	A Lightweight and Flexible Web Framework
2017-10-26	FinAna	Financial Analysis and Regression Diagnostic Analysis
2017-10-26	kaphom	Test the Homogeneity of Kappa Statistics
2017-10-26	meanr	Sentiment Analysis Scorer
2017-10-26	oro.nifti	Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
2017-10-26	routr	A Simple Router for HTTP and WebSocket Requests
2017-10-26	SCMA	Single-Case Meta-Analysis
2017-10-26	surveyplanning	Survey Planning Tools
2017-10-25	actogrammr	Read in Activity Data and Plot Actograms
2017-10-25	asus	Adaptive SURE Thresholding Using Side Information
2017-10-25	camtrapR	Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
2017-10-25	GerminaR	Germination Indexes for Seed Germination Variables for Ecophysiological Studies
2017-10-25	gmeta	Meta-Analysis via a Unified Framework of Confidence Distribution
2017-10-25	hdf5r	Interface to the 'HDF5' Binary Data Format
2017-10-25	multitaper	Spectral Analysis Tools using the Multitaper Method
2017-10-25	OPI	Open Perimetry Interface
2017-10-25	reqres	Powerful Classes for HTTP Requests and Responses
2017-10-25	Runuran	R Interface to the UNU.RAN Random Variate Generators
2017-10-25	WWR	Weighted Win Loss Statistics and their Variances
2017-10-24	autoimage	Multiple Heat Maps for Projected Coordinates
2017-10-24	cbar	Contextual Bayesian Anomaly Detection in R
2017-10-24	checkmate	Fast and Versatile Argument Checks
2017-10-24	densityClust	Clustering by Fast Search and Find of Density Peaks
2017-10-24	jsTree	Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
2017-10-24	lexiconPT	Lexicons for Portuguese Text Analysis
2017-10-24	MOEADr	Component-Wise MOEA/D Implementation
2017-10-24	MoLE	Modeling Language Evolution
2017-10-24	nspmix	Nonparametric and Semiparametric Mixture Estimation
2017-10-24	OOBCurve	Out of Bag Learning Curve
2017-10-24	optimization	Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints
2017-10-24	paramtest	Run a Function Iteratively While Varying Parameters
2017-10-24	Rlibeemd	Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)
2017-10-24	rsm	Response-Surface Analysis
2017-10-24	spTDyn	Spatially Varying and Spatio-Temporal Dynamic Linear Models
2017-10-24	XRPython	Structured Interface to 'Python'
2017-10-24	zebu	Local Association Measures
2017-10-23	AzureML	Interface with Azure Machine Learning Datasets, Experiments and Web Services
2017-10-23	carfima	Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
2017-10-23	DBEST	Detecting Breakpoints and Estimating Segments in Trend
2017-10-23	EfficientMaxEigenpair	Efficient Initials for Computing the Maximal Eigenpair
2017-10-23	lsei	Solving Least Squares or Quadratic Programming Problems under Equality/Inequality Constraints
2017-10-23	MHCtools	Analysis of MHC Data in Non-Model Species
2017-10-23	MlBayesOpt	Hyper Parameter Tuning for Machine Learning, Using Bayesian Optimization
2017-10-23	orcutt	Estimate Procedure in Case of First Order Autocorrelation
2017-10-23	PCAmixdata	Multivariate Analysis of Mixed Data
2017-10-23	ROI.plugin.deoptim	'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface
2017-10-23	WaveLetLongMemory	Estimating Long Memory Parameter using Wavelet
2017-10-23	zFactor	Calculate the Compressibility Factor 'z' for Hydrocarbon Gases
2017-10-22	debugme	Debug R Packages
2017-10-22	docuSignr	Connect to 'DocuSign' API
2017-10-22	groupdata2	Creating Groups from Data
2017-10-22	modcmfitr	Fit a Modified Connor-Mosimann Distribution to Elicited Quantiles in Multinomial Problems
2017-10-22	oii	Crosstab and Statistical Tests for OII MSc Stats Course
2017-10-22	PCA4you	PCA Plotting in a User Friendly Way
2017-10-22	ROI.plugin.ecos	'ECOS' Plugin for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.msbinlp	'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface
2017-10-22	ROI.plugin.nloptr	'nloptr' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.optimx	'optimx' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.scs	'SCS' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	sankey	Illustrate the Flow of Information or Material
2017-10-21	giphyr	R Interface to the Giphy API
2017-10-21	hogsvdR	Higher-Order Generalized Singular Value Decomposition
2017-10-21	RcmdrPlugin.survival	R Commander Plug-in for the 'survival' Package
2017-10-21	securitytxt	Identify and Parse Web Security Policies Files
2017-10-21	skyscapeR	Skyscape Archaeology Data Reduction, Visualization and Analysis
2017-10-20	accrual	Bayesian Accrual Prediction
2017-10-20	doFuture	A Universal Foreach Parallel Adaptor using the Future API of the 'future' Package
2017-10-20	DOvalidation	Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
2017-10-20	EHR	Electronic Health Record (EHR) Data Processing and Analysis Tool
2017-10-20	genomic.autocorr	Models Dealing with Spatial Dependency in Genomic Data
2017-10-20	ISLR	Data for an Introduction to Statistical Learning with Applications in R
2017-10-20	liteq	Lightweight Portable Message Queue Using 'SQLite'
2017-10-20	mvMonitoring	Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring
2017-10-20	OnAge	Test of Between-Group Differences in the Onset of Senescence
2017-10-20	ROI.plugin.cplex	ROI Plug-in CPLEX
2017-10-20	ROI.plugin.glpk	'ROI' Plug-in 'GLPK'
2017-10-20	whoami	Username, Full Name, Email Address, 'GitHub' Username of the Current User
2017-10-19	CausalGAM	Estimation of Causal Effects with Generalized Additive Models
2017-10-19	condformat	Conditional Formatting in Data Frames
2017-10-19	EasyMx	Easy Model-Builder Functions for 'OpenMx'
2017-10-19	EpiContactTrace	Epidemiological Tool for Contact Tracing
2017-10-19	gwrpvr	Genome-Wide Regression P-Value (Gwrpv)
2017-10-19	htm2txt	Convert Html into Text
2017-10-19	mafs	Multiple Automatic Forecast Selection
2017-10-19	monoreg	Bayesian Monotonic Regression Using a Marked Point Process Construction
2017-10-19	rabi	Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies
2017-10-19	rex	Friendly Regular Expressions
2017-10-19	rslurm	Submit R Calculations to a Slurm Cluster
2017-10-18	areaplot	Plot Stacked Areas and Confidence Bands as Filled Polygons
2017-10-18	divo	Tools for Analysis of Diversity and Similarity in Biological Systems
2017-10-18	FlowRegEnvCost	The Environmental Costs of Flow Regulation
2017-10-18	geoRglm	A Package for Generalised Linear Spatial Models
2017-10-18	gpuR	GPU Functions for R Objects
2017-10-18	GreedySBTM	Greedy Stochastic Block Transition Models
2017-10-18	HHG	Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
2017-10-18	HSAR	Hierarchical Spatial Autoregressive Model
2017-10-18	LZeroSpikeInference	Exact Spike Train Inference via L0 Optimization
2017-10-18	NNMIS	Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates
2017-10-18	onemap	Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses
2017-10-18	satellite	Handling and Manipulating Remote Sensing Data
2017-10-18	swa	Subsampling Winner Algorithm for Classification
2017-10-17	clustMixType	k-Prototypes Clustering for Mixed Variable-Type Data
2017-10-17	crosswalkr	Rename and Encode Data Frames Using External Crosswalk Files
2017-10-17	data360r	Wrapper for TC/Govdata360 API
2017-10-17	dbstats	Distance-Based Statistics
2017-10-17	geomedb	Fetch 'GeOMe-db' FIMS Data
2017-10-17	httpcache	Query Cache for HTTP Clients
2017-10-17	ivmodel	Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
2017-10-17	knockoff	The Knockoff Filter for Controlled Variable Selection
2017-10-17	mregions	Marine Regions Data from 'Marineregions.org'
2017-10-17	reddPrec	Reconstruction of Daily Data - Precipitation
2017-10-17	sicegar	Analysis of Single-Cell Viral Growth Curves
2017-10-17	snht	Standard Normal Homogeneity Test
2017-10-17	vennplot	Venn Diagrams in 2D and 3D
2017-10-16	BiG	Bayesian Aggregation in Genomic Applications
2017-10-16	copulaData	Data Sets for Copula Modeling
2017-10-16	corrplot	Visualization of a Correlation Matrix
2017-10-16	fishmethods	Fishery Science Methods and Models in R
2017-10-16	forestinventory	Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories
2017-10-16	GSMX	Multivariate Genomic Selection
2017-10-16	metacart	Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis
2017-10-16	metaheuristicOpt	Metaheuristic for Optimization
2017-10-16	mvdalab	Multivariate Data Analysis Laboratory
2017-10-16	rmsfuns	Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors
2017-10-16	SelvarMix	Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis
2017-10-16	SILGGM	Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks
2017-10-16	TSclust	Time Series Clustering Utilities
2017-10-15	pdfetch	Fetch Economic and Financial Time Series Data from Public Sources
2017-10-15	Plasmode	'Plasmode' Simulation
2017-10-15	RViennaCL	'ViennaCL' C++ Header Files
2017-10-14	asht	Applied Statistical Hypothesis Tests
2017-10-14	AssocTests	Genetic Association Studies
2017-10-14	bayesLife	Bayesian Projection of Life Expectancy
2017-10-14	collectArgs	Quickly and Neatly Collect Arguments from One Environment to Pass to Another
2017-10-14	covequal	Test for Equality of Covariance Matrices
2017-10-14	lawn	Client for 'Turfjs' for 'Geospatial' Analysis
2017-10-14	npsurv	Nonparametric Survival Analysis
2017-10-14	oshka	Recursive Quoted Language Expansion
2017-10-14	ProTrackR	Manipulate and Play 'ProTracker' Modules
2017-10-14	SEMID	Identifiability of Linear Structural Equation Models
2017-10-13	bedr	Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
2017-10-13	dave	Functions for "Data Analysis in Vegetation Ecology"
2017-10-13	queueing	Analysis of Queueing Networks and Models
2017-10-13	rucrdtw	R Bindings for the UCR Suite
2017-10-12	brainR	Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging
2017-10-12	curstatCI	Confidence Intervals for the Current Status Model
2017-10-12	icmm	Empirical Bayes Variable Selection via ICM/M Algorithm
2017-10-12	iDINGO	Integrative Differential Network Analysis in Genomics
2017-10-12	incgraph	Incremental Graphlet Counting for Network Optimisation
2017-10-12	poplite	Tools for Simplifying the Population and Querying of SQLite Databases
2017-10-12	PubMedWordcloud	'Pubmed' Word Clouds
2017-10-11	AmyloGram	Prediction of Amyloid Proteins
2017-10-11	condvis	Conditional Visualization for Statistical Models
2017-10-11	dblr	Discrete Boosting Logistic Regression
2017-10-11	HybridFS	A Hybrid Filter-Wrapper Feature Selection Method
2017-10-11	rgrass7	Interface Between GRASS 7 Geographical Information System and R
2017-10-11	SDMPlay	Species Distribution Modelling Playground
2017-10-11	SIMMS	Subnetwork Integration for Multi-Modal Signatures
2017-10-11	triversity	Diversity Measures on Tripartite Graphs
2017-10-11	XKCDdata	Get XKCD Comic Data
2017-10-11	xSub	Cross-National Data on Sub-National Violence
2017-10-10	bookdownplus	Generate Varied Types of Books and Documents with R 'bookdown' Package
2017-10-10	CCTpack	Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications
2017-10-10	colt	Command-Line Color Themes
2017-10-10	explor	Interactive Interfaces for Results Exploration
2017-10-10	freesurfer	Wrapper Functions for 'Freesurfer'
2017-10-10	GUTS	Fast Calculation of the Likelihood of a Stochastic Survival Model
2017-10-10	hisse	Hidden State Speciation and Extinction
2017-10-10	mapfuser	Construct Consensus Genetic Maps and Estimate Recombination Rates
2017-10-10	MCI	Multiplicative Competitive Interaction (MCI) Model
2017-10-10	pscl	Political Science Computational Laboratory
2017-10-10	PTE	Personalized Treatment Evaluator
2017-10-10	rakeR	Easy Spatial Microsimulation (Raking) in R
2017-10-09	brea	Bayesian Recurrent Event Analysis
2017-10-09	CatPredi	Optimal Categorisation of Continuous Variables in Prediction Models
2017-10-09	colf	Constrained Optimization on Linear Function
2017-10-09	mada	Meta-Analysis of Diagnostic Accuracy
2017-10-09	RcppBlaze	'Rcpp' Integration for the 'Blaze' High-Performance C++ Math Library
2017-10-09	Replicate	Statistical Metrics for Multisite Replication Studies
2017-10-08	anominate	Alpha-NOMINATE Ideal Point Estimator
2017-10-08	BMhyb	Hybrid Trait Evolution under Brownian Motion
2017-10-08	mozzie	Weekly Notified Dengue Cases in Sri Lanka
2017-10-08	RNetCDF	Interface to NetCDF Datasets
2017-10-07	D3partitionR	Interactive Charts of Nested and Hierarchical Data with 'D3.js'
2017-10-07	editData	'RStudio' Addin for Editing a 'data.frame'
2017-10-07	GROAN	Genomic Regression Workbench
2017-10-07	pmhtutorial	Minimal Working Examples for Particle Metropolis-Hastings
2017-10-07	RPEnsemble	Random Projection Ensemble Classification
2017-10-07	SQUAREM	Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms
2017-10-06	BaTFLED3D	Bayesian Tensor Factorization Linked to External Data
2017-10-06	Blaunet	Calculate and Analyze Blau Status for (Covert) Organizations
2017-10-06	BLRPM	Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model
2017-10-06	BrownDog	Brown Dog R Interface
2017-10-06	DWLasso	Degree Weighted Lasso
2017-10-06	genridge	Generalized Ridge Trace Plots for Ridge Regression
2017-10-06	IIS	Datasets to Accompany Wolfe and Schneider - Intuitive Introductory Statistics
2017-10-06	MareyMap	Estimation of Meiotic Recombination Rates Using Marey Maps
2017-10-06	oro.pet	Rigorous - Positron Emission Tomography
2017-10-06	PResiduals	Probability-Scale Residuals and Residual Correlations
2017-10-06	shelltrace	Bivalve Growth and Trace Element Accumulation Model
2017-10-05	DataEntry	Make it Easier to Enter Questionnaire Data
2017-10-05	diffMeanVar	Detecting Gene Probes with Different Means or Variances Between Two Groups
2017-10-05	EWGoF	Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
2017-10-05	INCATome	Internal Control Analysis of Translatome Studies by Microarrays
2017-10-05	latexpdf	Convert Tables to PDF or PNG
2017-10-05	matchbook	Wrapper for the 'Matchbook' API
2017-10-05	OutbreakTools	Basic Tools for the Analysis of Disease Outbreaks
2017-10-05	RelimpPCR	Relative Importance PCA Regression
2017-10-04	birtr	The R Package for "The Basics of Item Response Theory Using R"
2017-10-04	highlight	Syntax Highlighter
2017-10-04	IDF	Estimation and Plotting of IDF Curves
2017-10-04	infuser	A Very Basic Templating Engine
2017-10-04	kader	Kernel Adaptive Density Estimation and Regression
2017-10-04	lagsarlmtree	Spatial Lag Model Trees
2017-10-04	proustr	Tools for Natural Language Processing in French
2017-10-04	recombinator	Recombinate Nested Lists to Dataframes
2017-10-04	rma.exact	Exact Confidence Intervals for Random Effects Meta-Analyses
2017-10-04	Rssa	A Collection of Methods for Singular Spectrum Analysis
2017-10-04	selectiveInference	Tools for Post-Selection Inference
2017-10-04	smpic	Creates Images Sized for Social Media
2017-10-04	Sunclarco	Survival Analysis using Copulas
2017-10-03	confinterpret	Descriptive Interpretations of Confidence Intervals
2017-10-03	ecd	Elliptic Lambda Distribution and Option Pricing Model
2017-10-03	fedreporter	Interface to Federal 'RePORTER' API
2017-10-03	InvariantCausalPrediction	Invariant Causal Prediction
2017-10-03	transport	Optimal Transport in Various Forms
2017-10-02	additiveDEA	Additive Data Envelopment Analysis Models
2017-10-02	ConSpline	Partial Linear Least-Squares Regression using Constrained Splines
2017-10-02	DoubleCone	Test Against Parametric Regression Function
2017-10-02	EnergyOnlineCPM	Distribution Free Multivariate Control Chart Based on Energy Test
2017-10-02	exactci	Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
2017-10-02	ggallin	Grab Bag of 'ggplot2' Functions
2017-10-02	nzelect	New Zealand Election Data
2017-10-02	pivottabler	Create Pivot Tables in R
2017-10-02	polyCub	Cubature over Polygonal Domains
2017-10-02	RSwissMaps	Plot and Save Customised Swiss Maps
2017-10-02	rzmq	R Bindings for 'ZeroMQ'
2017-10-02	SigTree	Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree
2017-10-02	SPYvsSPY	Spy vs. Spy Data
2017-10-02	triangle	Provides the Standard Distribution Functions for the Triangle Distribution
2017-10-02	TSCS	Time Series Cointegrated System
2017-10-01	childsds	Data and Methods Around Reference Values in Pediatrics
2017-10-01	msaR	Multiple Sequence Alignment for R Shiny
2017-10-01	realestateDK	A Wrapper for the API of the Danish Housing Market Statistics
2017-10-01	teamcolors	Color Palettes for Pro Sports Teams
2017-09-30	basictabler	Construct Rich Tables for Output to 'HTML'/'Excel'
2017-09-30	msu	Multivariate Symmetric Uncertainty and Other Measurements
2017-09-30	SimTimeVar	Simulate Longitudinal Dataset with Time-Varying Correlated Covariates
2017-09-30	statsDK	A Wrapper for the API of Statistics Denmark
2017-09-29	apercu	Quick Look at your Data
2017-09-29	CHMM	Coupled Hidden Markov Models
2017-09-29	htmltidy	Tidy Up and Test XPath Queries on HTML and XML Content
2017-09-29	MFKnockoffs	Model-Free Knockoff Filter for Controlled Variable Selection
2017-09-29	mmpp	Various Similarity and Distance Metrics for Marked Point Processes
2017-09-29	pairwise	Rasch Model Parameters by Pairwise Algorithm
2017-09-29	RCPmod	Regions of Common Profiles Modelling with Mixtures-of-Experts
2017-09-29	rdrop2	Programmatic Interface to the 'Dropbox' API
2017-09-29	vcdExtra	'vcd' Extensions and Additions
2017-09-28	ArchaeoPhases	Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal'
2017-09-28	breakfast	Multiple Change-Point Detection and Segmentation
2017-09-28	chopthin	The Chopthin Resampler
2017-09-28	dataRetrieval	Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data
2017-09-28	doParallel	Foreach Parallel Adaptor for the 'parallel' Package
2017-09-28	electoral	Allocating Seats Methods and Party System Scores
2017-09-28	enaR	Tools for Ecological Network Analysis
2017-09-28	gesca	Generalized Structured Component Analysis (GSCA)
2017-09-28	glacierSMBM	Glacier Surface Mass Balance Model
2017-09-28	isnullptr	Check if an 'externalptr' is a Null Pointer
2017-09-28	jqr	Client for 'jq', a 'JSON' Processor
2017-09-28	pder	Panel Data Econometrics with R
2017-09-28	pifpaf	Potential Impact Fraction and Population Attributable Fraction for Cross-Sectional Data
2017-09-28	quickReg	Build Regression Models Quickly and Display the Results Using 'ggplot2'
2017-09-28	repfdr	Replicability Analysis for Multiple Studies of High Dimension
2017-09-27	colourpicker	A Colour Picker Tool for Shiny and for Selecting Colours in Plots
2017-09-27	ecoseries	An R Interface to Brazilian Central Bank and Sidra APIs and the IPEA Data
2017-09-27	etl	Extract-Transform-Load Framework for Medium Data
2017-09-27	EventStudy	Event Study Analysis
2017-09-27	importar	Enables Importing/Loading of Packages or Functions While Creating an Alias for Them
2017-09-27	kfda	Kernel Fisher Discriminant Analysis
2017-09-27	LFDREmpiricalBayes	Estimating Local False Discovery Rates Using Empirical Bayes Methods
2017-09-27	MNP	R Package for Fitting the Multinomial Probit Model
2017-09-27	sampSurf	Sampling Surface Simulation for Areal Sampling Methods
2017-09-27	surrosurv	Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses
2017-09-27	tau	Text Analysis Utilities
2017-09-27	tinyProject	A Lightweight Template for Data Analysis Projects
2017-09-26	BNPMIXcluster	Bayesian Nonparametric Model for Clustering with Mixed Scale Variables
2017-09-26	coinmarketcapr	Get Cryptocurrencies Market Cap Prices from Coin Market Cap
2017-09-26	RcppAnnoy	'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2017-09-25	d3plus	Seamless 'D3Plus' Integration
2017-09-25	econullnetr	Null Model Analysis for Ecological Networks
2017-09-25	prioritylasso	Analyzing Multiple Omics Data with an Offset Approach
2017-09-25	RDML	Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
2017-09-25	Rpdb	Read, Write, Visualize and Manipulate PDB Files
2017-09-25	svd	Interfaces to Various State-of-Art SVD and Eigensolvers
2017-09-25	TreeSimGM	Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model
2017-09-25	wrswoR.benchmark	Benchmark and Correctness Data for Weighted Random Sampling Without Replacement
2017-09-25	wsrf	Weighted Subspace Random Forest for Classification
2017-09-24	ICBayes	Bayesian Semiparametric Models for Interval-Censored Data
2017-09-24	MatrixCorrelation	Matrix Correlation Coefficients
2017-09-24	scam	Shape Constrained Additive Models
2017-09-23	apex	Phylogenetic Methods for Multiple Gene Data
2017-09-23	parlitools	Tools for Analysing UK Politics
2017-09-23	wikipediatrend	Public Subject Attention via Wikipedia Page View Statistics
2017-09-22	leabRa	The Artificial Neural Networks Algorithm Leabra
2017-09-22	mosaicModel	An Interface to Statistical Modeling Independent of Model Architecture
2017-09-22	MRFA	Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach
2017-09-22	OBMbpkg	Estimate the Population Size for the Mb Capture-Recapture Model
2017-09-22	rase	Range Ancestral State Estimation for Phylogeography and Comparative Analyses
2017-09-22	RcmdrPlugin.sutteForecastR	'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'
2017-09-22	regexSelect	Regular Expressions in 'shiny' Select Lists
2017-09-22	traits	Species Trait Data from Around the Web
2017-09-22	USCF	Elo Rating of a USCF Member
2017-09-22	WikidataR	API Client Library for 'Wikidata'
2017-09-21	AbsFilterGSEA	Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering
2017-09-21	brazilmaps	Brazilian Maps from Different Geographic Levels
2017-09-21	magicLamp	'WeMo Switch' Smart Plug Utilities
2017-09-21	metRology	Support for Metrological Applications
2017-09-21	QLearning	Reinforcement Learning using the Q Learning Algorithm
2017-09-21	rstansim	Simulation Studies with Stan
2017-09-21	softermax	Read Exported Data from 'SoftMax Pro'
2017-09-21	tigger	R Tools for Inferring New Immunoglobulin Alleles from Rep-Seq Data
2017-09-20	BradleyTerry2	Bradley-Terry Models
2017-09-20	cptec	An Interface to the 'CPTEC/INPE' API
2017-09-20	darksky	Tools to Work with the 'Dark Sky' 'API'
2017-09-20	ensemblepp	Ensemble Postprocessing Data Sets
2017-09-20	FDRSeg	FDR-Control in Multiscale Change-Point Segmentation
2017-09-20	molaR	Dental Surface Complexity Measurement Tools
2017-09-20	prettymapr	Scale Bar, North Arrow, and Pretty Margins in R
2017-09-20	ROI.plugin.clp	'Clp (Coin-or linear programming)' Plugin for the 'R' Optimization Interface
2017-09-20	SOIL	Sparsity Oriented Importance Learning
2017-09-19	binaryGP	Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response
2017-09-19	BMT	The BMT Distribution
2017-09-19	candisc	Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
2017-09-19	CluMix	Clustering and Visualization of Mixed-Type Data
2017-09-19	COCONUT	COmbat CO-Normalization Using conTrols (COCONUT)
2017-09-19	curvecomp	Multiple Curve Comparisons Using Parametric Bootstrap
2017-09-19	envDocument	Document the R Working Environment
2017-09-19	EQUIVNONINF	Testing for Equivalence and Noninferiority
2017-09-19	fusionclust	Clustering and Feature Screening using L1 Fusion Penalty
2017-09-19	gma	Granger Mediation Analysis
2017-09-19	IGP	Interchangeable Gaussian Process Models
2017-09-19	kpeaks	Determination of K Using Peak Counts of Features for Clustering
2017-09-19	lgtdl	A Set of Methods for Longitudinal Data Objects
2017-09-19	magicaxis	Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support
2017-09-19	MALDIrppa	MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
2017-09-19	qvcalc	Quasi Variances for Factor Effects in Statistical Models
2017-09-19	SiER	Signal Extraction Approach for Sparse Multivariate Response Regression
2017-09-19	stochvol	Efficient Bayesian Inference for Stochastic Volatility (SV) Models
2017-09-19	sure	Surrogate Residuals for Ordinal and General Regression Models
2017-09-18	BNSL	Bayesian Network Structure Learning
2017-09-18	egcm	Engle-Granger Cointegration Models
2017-09-18	leafSTAR	Silhouette to Area Ratio of Tilted Surfaces
2017-09-18	mcMST	A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
2017-09-18	mvLSW	Multivariate, Locally Stationary Wavelet Process Estimation
2017-09-18	prefmod	Utilities to Fit Paired Comparison Models for Preferences
2017-09-18	scaleboot	Approximately Unbiased P-Values via Multiscale Bootstrap
2017-09-18	tsgui	Gui for Simulating Time Series
2017-09-17	cytominer	Methods for Image-Based Cell Profiling
2017-09-17	randnet	Random Network Model Selection and Parameter Tuning
2017-09-17	rbtt	Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data
2017-09-17	SampleSize4ClinicalTrials	Sample Size Calculation for Mean and Proportion Comparisons in Phase 3 Clinical Trials
2017-09-16	crayon	Colored Terminal Output
2017-09-16	DES	Discrete Event Simulation
2017-09-16	forestplot	Advanced Forest Plot Using 'grid' Graphics
2017-09-16	gensphere	Generalized Spherical Distributions
2017-09-16	googleComputeEngineR	R Interface with Google Compute Engine
2017-09-16	MsdeParEst	Parametric Estimation in Mixed-Effects Stochastic Differential Equations
2017-09-16	mvmesh	Multivariate Meshes and Histograms in Arbitrary Dimensions
2017-09-16	PKI	Public Key Infrastucture for R Based on the X.509 Standard
2017-09-16	SphericalCubature	Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates
2017-09-16	wildcard	Templates for Data Frames
2017-09-15	AurieLSHGaussian	Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections
2017-09-15	CATTexact	Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test
2017-09-15	DoE.wrapper	Wrapper Package for Design of Experiments Functionality
2017-09-15	fastcox	Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm
2017-09-15	gglasso	Group Lasso Penalized Learning Using a Unified BMD Algorithm
2017-09-15	Gmedian	Geometric Median, k-Median Clustering and Robust Median PCA
2017-09-15	gradientPickerD3	Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker'
2017-09-15	heemod	Markov Models for Health Economic Evaluations
2017-09-15	linemap	Line Maps
2017-09-15	medflex	Flexible Mediation Analysis Using Natural Effect Models
2017-09-15	MFT	The Multiple Filter Test for Change Point Detection
2017-09-15	veccompare	Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output
2017-09-14	alineR	Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
2017-09-14	ASMap	Linkage Map Construction using the MSTmap Algorithm
2017-09-14	CausalImpact	Inferring Causal Effects using Bayesian Structural Time-Series Models
2017-09-14	causalMGM	Causal Learning of Mixed Graphical Models
2017-09-14	glassdoor	Interface to 'Glassdoor' API
2017-09-14	MAMS	Designing Multi-Arm Multi-Stage Studies
2017-09-14	mmand	Mathematical Morphology in Any Number of Dimensions
2017-09-14	TR8	A Tool for Downloading Functional Traits Data for Plant Species
2017-09-13	ADPF	Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay
2017-09-13	asdreader	Reading ASD Binary Files in R
2017-09-12	agricolae	Statistical Procedures for Agricultural Research
2017-09-12	auto.pca	Automatic Variable Reduction Using Principal Component Analysis
2017-09-12	BSSasymp	Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
2017-09-12	DCD	Differential Community Detection in Paired Biological Networks
2017-09-12	dosresmeta	Multivariate Dose-Response Meta-Analysis
2017-09-12	fICA	Classical, Reloaded and Adaptive FastICA Algorithms
2017-09-12	FractalParameterEstimation	Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model
2017-09-12	gains	Lift (Gains) Tables and Charts
2017-09-12	medmod	Simple Mediation and Moderation Analysis
2017-09-12	PredPsych	Predictive Approaches in Psychology
2017-09-12	qtlbook	Datasets for the R/qtl Book
2017-09-12	sparsebn	Learning Sparse Bayesian Networks from High-Dimensional Data
2017-09-12	unifDAG	Uniform Sampling of Directed Acyclic Graphs
2017-09-11	BayesCR	Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
2017-09-11	bmp	Read Windows Bitmap (BMP) Images
2017-09-11	GauPro	Gaussian Process Fitting
2017-09-11	gmt	Interface Between GMT Map-Making Software and R
2017-09-11	mvna	Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models
2017-09-11	nos	Compute Node Overlap and Segregation in Ecological Networks
2017-09-11	opendotaR	Interface for OpenDota API
2017-09-11	serial	The Serial Interface Package
2017-09-11	showtextdb	Font Files for the 'showtext' Package
2017-09-11	sutteForecastR	Forecasting Data using Alpha-Sutte Indicator
2017-09-11	svglite	An 'SVG' Graphics Device
2017-09-11	TideCurves	Analysis and Prediction of Tides
2017-09-11	TideTables	Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
2017-09-11	yuimaGUI	A Graphical User Interface for the 'yuima' Package
2017-09-10	discretecdAlgorithm	Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks
2017-09-10	MTSYS	Methods in Mahalanobis-Taguchi (MT) System
2017-09-10	SNSequate	Standard and Nonstandard Statistical Models and Methods for Test Equating
2017-09-09	CARS	Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference
2017-09-09	fecR	Fishing Effort Calculator in R
2017-09-09	GeoMongo	Geospatial Queries Using 'PyMongo'
2017-09-09	gridExtra	Miscellaneous Functions for "Grid" Graphics
2017-09-09	jointDiag	Joint Approximate Diagonalization of a Set of Square Matrices
2017-09-09	RcppRedis	'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2017-09-09	RTaxometrics	Taxometric Analysis
2017-09-08	distrr	Estimate and Manage Empirical Distributions
2017-09-08	openintro	Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
2017-09-08	PhylogeneticEM	Automatic Shift Detection using a Phylogenetic EM
2017-09-08	repurrrsive	Examples of Recursive Lists and Nested or Split Data Frames
2017-09-08	SMM	Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models
2017-09-08	varbvs	Large-Scale Bayesian Variable Selection Using Variational Methods
2017-09-07	AWR	'AWS' Java 'SDK' for R
2017-09-07	backShift	Learning Causal Cyclic Graphs from Unknown Shift Interventions
2017-09-07	Bios2cor	From Biological Sequences and Simulations to Correlation Analysis
2017-09-07	cprr	Functions for Working with Danish CPR Numbers
2017-09-07	mapReasy	Producing Administrative Boundary Map with Additional Features Embedded
2017-09-07	modelwordcloud	Model Word Clouds
2017-09-07	multilaterals	Transitive Index Numbers for Cross-Sections and Panel Data
2017-09-07	PakPMICS2014Ch	Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HH	Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HL	Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014Wm	Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan
2017-09-07	rstudioapi	Safely Access the RStudio API
2017-09-07	Rvcg	Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2017-09-07	simex	SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
2017-09-07	TileManager	Tile Manager
2017-09-07	unjoin	Separate a Data Frame by Normalization
2017-09-06	csabounds	Bounds on Distributional Treatment Effect Parameters
2017-09-06	FactorsR	Identification of the Factors Affecting Species Richness
2017-09-06	madrat	May All Data be Reproducible and Transparent (MADRaT) *
2017-09-06	magclass	Data Class and Tools for Handling Spatial-Temporal Data
2017-09-06	Ohit	OGA+HDIC+Trim and High-Dimensional Linear Regression Models
2017-09-06	SpatialPosition	Spatial Position Models
2017-09-06	survPresmooth	Presmoothed Estimation in Survival Analysis
2017-09-06	TNC	Temporal Network Centrality (TNC) Measures
2017-09-06	UdderQuarterInfectionData	Udder Quarter Infection Data
2017-09-05	clusterPower	Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials
2017-09-05	FuzzyNumbers.Ext.2	Apply Two Fuzzy Numbers on a Monotone Function
2017-09-05	graphql	A GraphQL Query Parser
2017-09-05	psda	Polygonal Symbolic Data Analysis
2017-09-05	RcextTools	Analytical Procedures in Support of Brazilian Public Sector External Auditing
2017-09-05	VDSPCalibration	Statistical Methods for Designing and Analyzing a Calibration Study
2017-09-04	billboard	Contains Data of Billboard Hot 100 Songs
2017-09-04	BosonSampling	Classical Boson Sampling
2017-09-04	cbanalysis	Coffee Break Descriptive Analysis
2017-09-04	dplyrAssist	RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr'
2017-09-04	freqdom.fda	Functional Time Series: Dynamic Functional Principal Components
2017-09-04	geex	An API for M-Estimation
2017-09-04	msBP	Multiscale Bernstein Polynomials for Densities
2017-09-04	re2r	RE2 Regular Expression
2017-09-04	RGeode	Geometric Density Estimation
2017-09-04	sdpt3r	Semi-Definite Quadratic Linear Programming Solver
2017-09-04	threshr	Threshold Selection and Uncertainty for Extreme Value Analysis
2017-09-03	alphavantager	Lightweight R Interface to the Alpha Vantage API
2017-09-03	doubcens	Survivor Function Estimation for Doubly Interval-Censored Failure Time Data
2017-09-03	iMediate	Likelihood Methods for Mediation Analysis
2017-09-03	pcdpca	Dynamic Principal Components for Periodically Correlated Functional Time Series
2017-09-03	ShinyImage	Image Manipulation, with an Emphasis on Journaling
2017-09-02	AlphaVantageClient	Wrapper for Alpha Vantage API
2017-09-02	BinarybalancedCut	Threshold Cut Point of Probability for a Binary Classifier Model
2017-09-02	Fuzzy.p.value	Computing Fuzzy p-Value
2017-09-02	recosystem	Recommender System using Matrix Factorization
2017-09-01	afpt	Tools for Modelling of Animal Flight Performance
2017-09-01	ChemometricsWithR	Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
2017-09-01	copula	Multivariate Dependence with Copulas
2017-09-01	cr17	Testing Differences Between Competing Risks Models and Their Visualisations
2017-09-01	DelayedEffect.Design	Sample Size and Power Calculations using the APPLE and SEPPLE Methods
2017-09-01	EcoIndR	Ecological Indicators
2017-09-01	edrGraphicalTools	Provides Tools for Dimension Reduction Methods
2017-09-01	freqdom	Frequency Domain Based Analysis: Dynamic PCA
2017-09-01	Inflation	Core Inflation
2017-09-01	jaod	Directory of Open Access Journals Client
2017-09-01	LGEWIS	Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies
2017-09-01	pkggraph	A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories
2017-09-01	R2MLwiN	Running 'MLwiN' from Within R
2017-09-01	R2SWF	Convert R Graphics to Flash Animations
2017-09-01	rDotNet	Low-Level Interface to the '.NET' Virtual Machine Along the Lines of the R C/Call API
2017-09-01	sptemExp	Constrained Spatiotemporal Mixed Models for Exposure Estimation
2017-09-01	wru	Who are You? Bayesian Prediction of Racial Category Using Surname and Geolocation
2017-08-31	ari	Automated R Instructor
2017-08-31	cdparcoord	Top Frequency-Based Parallel Coordinates
2017-08-31	itsadug	Interpreting Time Series and Autocorrelated Data Using GAMMs
2017-08-31	npphen	Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data
2017-08-31	wktmo	Converting Weekly Data to Monthly Data
2017-08-30	benchmarkme	Crowd Sourced System Benchmarks
2017-08-30	cenGAM	Censored Regression with Smooth Terms
2017-08-30	deltar	Calculation of Delta R Values
2017-08-30	DTRreg	DTR Estimation and Inference via G-Estimation, Dynamic WOLS, and Q-Learning
2017-08-30	h5	Interface to the 'HDF5' Library
2017-08-30	nor1mix	Normal (1-d) Mixture Models (S3 Classes and Methods)
2017-08-30	OasisR	Outright Tool for the Analysis of Spatial Inequalities and Segregation
2017-08-30	PIGE	Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis
2017-08-30	plotfunctions	Various Functions to Facilitate Visualization of Data and Analysis
2017-08-30	seedCCA	Seeded Canonical Correlation Analysis
2017-08-29	benchmarkmeData	Data Set for the 'benchmarkme' Package
2017-08-29	datapack	A Flexible Container to Transport and Manipulate Data and Associated Resources
2017-08-29	ebmc	Ensemble-Based Methods for Class Imbalance Problem
2017-08-29	FPV	Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
2017-08-29	LowWAFOMSobol	Low WAFOM Sobol Sequence
2017-08-29	mcompanion	Objects and Methods for Multi-Companion Matrices
2017-08-29	MTE	Maximum Tangent Likelihood and Other Robust Estimation for High-Dimensional Regression
2017-08-29	nomogramEx	Extract Equations from a Nomogram
2017-08-29	PeriodicTable	Periodic Table of the Elements
2017-08-29	poweRlaw	Analysis of Heavy Tailed Distributions
2017-08-29	sensitivitymult	Sensitivity Analysis for Observational Studies with Multiple Outcomes
2017-08-29	sgPLS	Sparse Group Partial Least Square Methods
2017-08-29	statquotes	Quotes on Statistics, Data Visualization and Science
2017-08-28	caffsim	Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model
2017-08-28	ccmm	Compositional Mediation Model
2017-08-28	dmutate	Mutate Data Frames with Random Variates
2017-08-28	googledrive	An Interface to Google Drive
2017-08-28	holdem	Texas Holdem Simulator
2017-08-28	nlts	(Non)Linear Time Series Analysis
2017-08-28	plot3D	Plotting Multi-Dimensional Data
2017-08-28	PSIMEX	SIMEX Algorithm on Pedigree Structures
2017-08-28	qicharts	Quality Improvement Charts
2017-08-28	qualpalr	Automatic Generation of Qualitative Color Palettes
2017-08-28	SpatialEpiApp	A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data
2017-08-26	cchs	Cox Model for Case-Cohort Data with Stratified Subcohort-Selection
2017-08-25	downscale	Downscaling Species Occupancy
2017-08-25	LowWAFOMNX	Low WAFOM Niederreiter-Xing Sequence
2017-08-25	prcr	Person-Centered Analysis
2017-08-25	webTRISr	A Wrapper Around 'WebTRIS' Traffic Flow API from Highways England
2017-08-24	accSDA	Accelerated Sparse Discriminant Analysis
2017-08-24	celestial	Collection of Common Astronomical Conversion Routines and Functions
2017-08-24	Ecohydmod	Ecohydrological Modelling
2017-08-24	ecoreg	Ecological Regression using Aggregate and Individual Data
2017-08-24	mExplorer	Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data
2017-08-24	multdyn	Multiregression Dynamic Models
2017-08-24	noncomplyR	Bayesian Analysis of Randomized Experiments with Non-Compliance
2017-08-24	Strategy	Generic Framework to Analyze Trading Strategies
2017-08-23	ActiveDriver	Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
2017-08-23	CpGFilter	CpG Filtering Method Based on Intra-Class Correlation Coefficients
2017-08-23	FPDclustering	PD-Clustering and Factor PD-Clustering
2017-08-23	genepop	Population Genetic Data Analysis Using Genepop
2017-08-23	kntnr	R Client for 'kintone' API
2017-08-23	macc	Mediation Analysis of Causality under Confounding
2017-08-23	npcp	Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations
2017-08-23	precrec	Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves
2017-08-23	SCRSELECT	Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model
2017-08-22	ConfigParser	Package to Parse an INI File, Including Variable Interpolation
2017-08-22	esreg	Joint Quantile and Expected Shortfall Regression
2017-08-22	factoextra	Extract and Visualize the Results of Multivariate Data Analyses
2017-08-22	iccbeta	Multilevel Model Intraclass Correlation for Slope Heterogeneity
2017-08-22	nloptr	R interface to NLopt
2017-08-22	R2DGC	Multiple Peak Alignment for 2D Gas Chromatography Mass Spectrometry Metabolomics Analysis
2017-08-22	simpleCache	Simply Caching R Objects
2017-08-22	SLICER	Selective Locally Linear Inference of Cellular Expression Relationships
2017-08-22	STARTdesign	Single to Double Arm Transition Design for Phase II Clinical Trials
2017-08-22	Wrapped	Computes Pdf, Cdf, Quantile, Random Numbers and Provides Estimation for any Univariate Wrapped Distributions
2017-08-22	zic	Bayesian Inference for Zero-Inflated Count Models
2017-08-21	BayesBD	Bayesian Inference for Image Boundaries
2017-08-21	BeviMed	Bayesian Evaluation of Variant Involvement in Mendelian Disease
2017-08-21	InfoTrad	Calculates the Probability of Informed Trading (PIN)
2017-08-21	ircor	Correlation Coefficients for Information Retrieval
2017-08-21	vegdata	Access Vegetation Databases and Treat Taxonomy
2017-08-20	GRCdata	Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data
2017-08-20	happybiRthday	Calculate Upcoming Birthday Dates of Github Repos
2017-08-20	HSAUR2	A Handbook of Statistical Analyses Using R (2nd Edition)
2017-08-20	httr	Tools for Working with URLs and HTTP
2017-08-19	alleHap	Allele Imputation and Haplotype Reconstruction from Pedigree Databases
2017-08-19	ccRemover	Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
2017-08-19	NetworkChange	Bayesian Package for Network Changepoint Analysis
2017-08-18	CIAAWconsensus	Isotope Ratio Meta-Analysis
2017-08-18	HSAUR	A Handbook of Statistical Analyses Using R (1st Edition)
2017-08-18	mHG	Minimum-Hypergeometric Test
2017-08-18	odpc	One-Sided Dynamic Principal Components
2017-08-18	sasMap	Static 'SAS' Code Analysis
2017-08-18	wppExplorer	Explorer of World Population Prospects
2017-08-17	CompDist	Multisection Composite Distributions
2017-08-17	ecoengine	Programmatic Interface to the Web Service Methods Provided by UC Berkeley's Natural History Data
2017-08-17	forwards	Data from Surveys Conducted by Forwards
2017-08-17	FuzzyLP	Fuzzy Linear Programming
2017-08-17	gamCopula	Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas
2017-08-17	hei	Calculate Healthy Eating Index (HEI) Scores
2017-08-17	outbreaker	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2017-08-17	zipfR	Statistical Models for Word Frequency Distributions
2017-08-16	AssayCorrector	Detection and Correction of Spatial Bias in HTS Screens
2017-08-16	atlantistools	Process and Visualise Output from Atlantis Models
2017-08-16	diagram	Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
2017-08-16	IceCast	Apply Statistical Post-Processing to Improve Sea Ice Predictions
2017-08-16	xmeta	A Toolbox for Multivariate Meta-Analysis
2017-08-15	ggquiver	Quiver Plots for 'ggplot2'
2017-08-15	GrpString	Patterns and Statistical Differences Between Two Groups of Strings
2017-08-15	Lahman	Sean 'Lahman' Baseball Database
2017-08-15	LBSPR	Length-Based Spawning Potential Ratio
2017-08-15	NLP	Natural Language Processing Infrastructure
2017-08-15	PeakSegDP	Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data
2017-08-15	PeakSegJoint	Joint Peak Detection in Several ChIP-Seq Samples
2017-08-15	ReacTran	Reactive Transport Modelling in 1d, 2d and 3d
2017-08-15	samon	Sensitivity Analysis for Missing Data
2017-08-15	SorptionAnalysis	Static Adsorption Experiment Plotting and Analysis
2017-08-14	CIplot	Functions to Plot Confidence Interval
2017-08-14	ConfoundedMeta	Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses
2017-08-14	fastJT	Efficient Jonckheere-Terpstra Test Statistics for Robust Machine Learning and Genome-Wide Association Studies
2017-08-14	jtGWAS	Efficient Jonckheere-Terpstra Test Statistics
2017-08-14	limSolve	Solving Linear Inverse Models
2017-08-14	lmmen	Linear Mixed Model Elastic Net
2017-08-14	MPLikelihoodWB	Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters
2017-08-14	robustrao	An Extended Rao-Stirling Diversity Index to Handle Missing Data
2017-08-14	smoof	Single and Multi-Objective Optimization Test Functions
2017-08-14	tsiR	An Implementation of the TSIR Model
2017-08-13	OrgMassSpecR	Organic Mass Spectrometry
2017-08-13	rdpla	Client for the Digital Public Library of America ('DPLA')
2017-08-13	threejs	Interactive 3D Scatter Plots, Networks and Globes
2017-08-12	ClustOfVar	Clustering of Variables
2017-08-12	crminer	Fetch 'Scholary' Full Text from 'Crossref'
2017-08-12	dataMeta	Create and Append a Data Dictionary for an R Dataset
2017-08-11	IAbin	Plotting N-T Plane for Decision on Performing an Interim Analysis
2017-08-11	rasterList	A Raster Where Cells are Generic Objects
2017-08-11	rcv	Ranked Choice Voting
2017-08-11	rtimes	Client for New York Times 'APIs'
2017-08-11	TreatmentSelection	Evaluate Treatment Selection Biomarkers
2017-08-11	valaddin	Functional Input Validation
2017-08-11	vanddraabe	Identification and Statistical Analysis of Conserved Waters in Proteins
2017-08-10	BCEE	The Bayesian Causal Effect Estimation Algorithm
2017-08-10	SALTSampler	Efficient Sampling on the Simplex
2017-08-10	vocaldia	Create and Manipulate Vocalisation Diagrams
2017-08-09	GEint	Misspecified Models for Gene-Environment Interaction
2017-08-09	gsw	Gibbs Sea Water Functions
2017-08-09	IPMRF	Intervention in Prediction Measure (IPM) for Random Forests
2017-08-09	MBSGS	Multivariate Bayesian Sparse Group Selection with Spike and Slab
2017-08-09	phylocurve	Phylogenetic Comparative Methods for High-Dimensional Traits
2017-08-09	poker	Play Texas Hold Em Poker
2017-08-09	PsyControl	CUSUM Person Fit Statistics
2017-08-09	RcmdrPlugin.RiskDemo	R Commander Plug-in for Risk Demonstration
2017-08-09	retistruct	Retinal Reconstruction Program
2017-08-09	zCompositions	Treatment of Zeros and Nondetects in Compositional Data Sets
2017-08-08	EbayesThresh	Empirical Bayes Thresholding and Related Methods
2017-08-08	hydroGOF	Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series
2017-08-08	kangar00	Kernel Approaches for Nonlinear Genetic Association Regression
2017-08-08	kml3d	K-Means for Joint Longitudinal Data
2017-08-08	npbr	Nonparametric Boundary Regression
2017-08-08	OHPL	Ordered Homogeneity Pursuit Lasso for Group Variable Selection
2017-08-08	plaqr	Partially Linear Additive Quantile Regression
2017-08-08	skmeans	Spherical k-Means Clustering
2017-08-08	spatialkernel	Non-Parametric Estimation of Spatial Segregation in a Multivariate Point Process
2017-08-07	blink	Record Linkage for Empirically Motivated Priors
2017-08-07	blsAPI	Request Data from the U.S. Bureau of Labor Statistics API
2017-08-07	default	Change the Default Arguments in R Functions
2017-08-07	dlstats	Download Stats of R Packages
2017-08-07	ggbeeswarm	Categorical Scatter (Violin Point) Plots
2017-08-07	hydroTSM	Time Series Management, Analysis and Interpolation for Hydrological Modelling
2017-08-07	multiCA	Multinomial Cochran-Armitage Trend Test
2017-08-07	permGS	Permutational Group Sequential Test for Time-to-Event Data
2017-08-07	statesRcontiguous	Shapefiles for the Contiguous United States of America
2017-08-07	tsPI	Improved Prediction Intervals for ARIMA Processes and Structural Time Series
2017-08-07	usl	Analyze System Scalability with the Universal Scalability Law
2017-08-06	reshape	Flexibly Reshape Data
2017-08-06	restfulr	R Interface to RESTful Web Services
2017-08-06	VARtests	Tests for Error Autocorrelation and ARCH Errors in Vector Autoregressive Models
2017-08-05	ggversa	Graficas Versatiles Con 'ggplot2'
2017-08-05	italy	The Italian Survey on Household and Wealth, 2008 and 2010
2017-08-05	iterLap	Approximate Probability Densities by Iterated Laplace Approximations
2017-08-05	MCPMod	Design and Analysis of Dose-Finding Studies
2017-08-05	r2glmm	Computes R Squared for Mixed (Multilevel) Models
2017-08-04	equaltestMI	Examine Measurement Invariance via Equivalence Testing and Projection Method
2017-08-04	GFA	Group Factor Analysis
2017-08-04	lctools	Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools
2017-08-04	MCS	Model Confidence Set Procedure
2017-08-04	metaBMA	Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis
2017-08-04	RcppXPtrUtils	XPtr Add-Ons for 'Rcpp'
2017-08-04	soilcarbon	Tools to Analyze Soil Carbon Database Created by Powell Center Working Group
2017-08-04	SpatialAcc	Spatial Accessibility Measures
2017-08-04	spbabel	Convert Spatial Data Using Tidy Tables
2017-08-03	banR	R Client for the BAN API
2017-08-03	cranlike	Tools for 'CRAN'-Like Repositories
2017-08-03	echogram	Echogram Visualisation and Analysis
2017-08-03	EMAtools	Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data
2017-08-03	ggsignif	Significance Brackets for 'ggplot2'
2017-08-03	glmBfp	Bayesian Fractional Polynomials for GLMs
2017-08-03	Grid2Polygons	Convert Spatial Grids to Polygons
2017-08-03	IntegratedJM	Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature
2017-08-03	lmmpar	Parallel Linear Mixed Model
2017-08-03	multistate	Fitting Multistate Models
2017-08-03	rddensity	Manipulation Testing Based on Density Discontinuity
2017-08-03	SKAT	SNP-Set (Sequence) Kernel Association Test
2017-08-03	svenssonm	Svensson's Method
2017-08-02	ambhasGW	Ground Water Modelling
2017-08-02	geohash	Tools for Geohash Creation and Manipulation
2017-08-02	GreedyEPL	Greedy Expected Posterior Loss
2017-08-02	IrishDirectorates	Irish Companies' Boards from 2003 to 2013
2017-08-02	lmom	L-Moments
2017-08-02	lmomRFA	Regional Frequency Analysis using L-Moments
2017-08-02	MixtureRegLTIC	Mixture Regression Models for Left-Truncated and Interval-Censored Data
2017-08-02	NPflow	Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data
2017-08-02	rgeolocate	IP Address Geolocation
2017-08-02	rtimicropem	Supports the Analysis of RTI MicroPEM Output Files
2017-08-02	Sequential	Exact Sequential Analysis for Poisson and Binomial Data
2017-08-02	subgroup.discovery	Subgroup Discovery and Bump Hunting
2017-08-02	tbl2xts	Convert Tibbles or Data Frames to Xts Easily
2017-08-02	ThermIndex	Calculate Thermal Indexes
2017-08-02	tourr	Implement Tour Methods in R Code
2017-08-01	dejaVu	Multiple Imputation for Recurrent Events
2017-08-01	DoEstRare	Rare Variant Association Test Based on Position Density Estimation
2017-08-01	eco	Ecological Inference in 2x2 Tables
2017-08-01	fasjem	A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models
2017-08-01	glmnetUtils	Utilities for 'Glmnet'
2017-08-01	hIRT	Hierarchical Item Response Theory Models
2017-08-01	kpmt	Known Population Median Test
2017-08-01	Rborist	Extensible, Parallelizable Implementation of the Random Forest Algorithm
2017-08-01	seqinr	Biological Sequences Retrieval and Analysis
2017-08-01	structree	Tree-Structured Clustering
2017-07-31	GeNetIt	Spatial Graph-Theoretic Genetic Gravity Modelling
2017-07-31	GWRM	Generalized Waring Regression Model for Count Data
2017-07-31	LindenmayeR	Functions to Explore L-Systems (Lindenmayer Systems)
2017-07-31	nonlinearICP	Invariant Causal Prediction for Nonlinear Models
2017-07-31	RODBCext	Parameterized Queries Extension for RODBC
2017-07-31	SimComp	Simultaneous Comparisons for Multiple Endpoints
2017-07-30	boot	Bootstrap Functions (Originally by Angelo Canty for S)
2017-07-30	BSDA	Basic Statistics and Data Analysis
2017-07-30	phybreak	Analysis of Outbreaks with Sequence Data
2017-07-30	pseudo	Computes Pseudo-Observations for Modeling
2017-07-29	fChange	Change Point Analysis in Functional Data
2017-07-29	MasterBayes	ML and MCMC Methods for Pedigree Reconstruction and Analysis
2017-07-29	rAverage	Parameter Estimation for the Averaging Model of Information Integration Theory
2017-07-29	rclipboard	Shiny/R Wrapper for 'clipboard.js'
2017-07-29	RkMetrics	Hybrid Mortality Estimation
2017-07-29	soilwater	Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve
2017-07-28	CDVineCopulaConditional	Sampling from Conditional C- and D-Vine Copulas
2017-07-28	HiveR	2D and 3D Hive Plots for R
2017-07-28	js	Tools for Working with JavaScript in R
2017-07-28	mmtsne	Multiple Maps t-SNE
2017-07-28	rmatio	Read and Write 'Matlab' Files
2017-07-27	Delta	Measure of Agreement Between Two Raters
2017-07-27	dHSIC	Independence Testing via Hilbert Schmidt Independence Criterion
2017-07-27	fastR	Foundations and Applications of Statistics Using R
2017-07-27	lsplsGlm	Classification using LS-PLS for Logistic Regression
2017-07-27	mosaicCalc	Function-Based Numerical and Symbolic Differentiation and Antidifferentiation
2017-07-27	optiSolve	Linear, Quadratic, and Rational Optimization
2017-07-26	exCon	Interactive Exploration of Contour Data
2017-07-26	iRF	iterative Random Forests
2017-07-26	maxTPR	Maximizing the TPR for a Specified FPR
2017-07-26	SpecHelpers	Spectroscopy Related Utilities
2017-07-26	table1xls	Exports Reproducible Summary Tables to Multi-Tab Spreadsheet Files (.xls or .xlsx)
2017-07-26	unrepx	Analysis and Graphics for Unreplicated Experiments
2017-07-25	bayeslongitudinal	Adjust Longitudinal Regression Models Using Bayesian Methodology
2017-07-25	CerioliOutlierDetection	Outlier Detection Using the Iterated RMCD Method of Cerioli (2010)
2017-07-25	concaveman	A Very Fast 2D Concave Hull Algorithm
2017-07-25	gamm4	Generalized Additive Mixed Models using 'mgcv' and 'lme4'
2017-07-25	ggseqlogo	A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
2017-07-25	MRTSampleSize	A Sample Size Calculator for Micro-Randomized Trials
2017-07-25	PowerNormal	Power Normal Distribution
2017-07-25	qtlmt	Tools for Mapping Multiple Complex Traits
2017-07-25	RxnSim	Functions to Compute Chemical Reaction Similarity
2017-07-25	seqICP	Sequential Invariant Causal Prediction
2017-07-25	sidrar	An Interface to IBGE's SIDRA API
2017-07-25	WhatIf	Evaluate Counterfactuals
2017-07-24	APSIM	General Utility Functions for the 'Agricultural Production Systems Simulator'
2017-07-24	EFS	Tool for Ensemble Feature Selection
2017-07-24	GGEBiplots	GGE Biplots with 'ggplot2'
2017-07-24	gIPFrm	Generalized Iterative Proportional Fitting for Relational Models
2017-07-24	l0ara	Sparse Generalized Linear Model with L0 Approximation for Feature Selection
2017-07-24	pcensmix	Model Fitting to Progressively Censored Mixture Data
2017-07-24	reproducer	Reproduce Statistical Analyses and Meta-Analyses
2017-07-23	aRpsDCA	Arps Decline Curve Analysis in R
2017-07-23	c2c	Compare Two Classifications or Clustering Solutions of Varying Structure
2017-07-23	geoGAM	Select Sparse Geoadditive Models for Spatial Prediction
2017-07-22	dsmodels	A Language to Facilitate Simulation and Visualization of Two-Dimensional Dynamical Systems
2017-07-22	faoutlier	Influential Case Detection Methods for Factor Analysis and Structural Equation Models
2017-07-22	prisonbrief	Downloads and Parses World Prison Brief Data
2017-07-22	vcov	Variance-Covariance Matrices and Standard Errors
2017-07-21	bayesm	Bayesian Inference for Marketing/Micro-Econometrics
2017-07-21	bold	Interface to Bold Systems API
2017-07-21	FuzzyStatProb	Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
2017-07-21	getPass	Masked User Input
2017-07-21	IMPACT	The Impact of Items
2017-07-21	minerva	Maximal Information-Based Nonparametric Exploration for Variable Analysis
2017-07-21	spNNGP	Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes
2017-07-20	ChaosGame	Chaos Game
2017-07-20	DCA	Dynamic Correlation Analysis for High Dimensional Data
2017-07-20	pcaL1	L1-Norm PCA Methods
2017-07-19	atus	American Time Use Survey Data
2017-07-19	BayesianGLasso	Bayesian Graphical Lasso
2017-07-19	corHMM	Analysis of Binary Character Evolution
2017-07-19	Counterfactual	Estimation and Inference Methods for Counterfactual Analysis
2017-07-19	drfit	Dose-Response Data Evaluation
2017-07-19	FastSF	Fast Structural Filtering
2017-07-19	harmonicmeanp	Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood
2017-07-19	ivregEX	Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis
2017-07-19	liquidSVM	A Fast and Versatile SVM Package
2017-07-19	mindr	Convert Files Between Markdown or Rmarkdown Files and Mindmaps
2017-07-19	OBRE	Optimal B-Robust Estimator Tools
2017-07-19	refimpact	API Wrapper for the UK REF 2014 Impact Case Studies Database
2017-07-19	scifigure	Visualize Reproducibility and Replicability in a Comparison of Scientific Studies
2017-07-19	sfinx	Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
2017-07-19	spBayes	Univariate and Multivariate Spatial-Temporal Modeling
2017-07-19	stabs	Stability Selection with Error Control
2017-07-19	surveydata	Tools to Work with Survey Data
2017-07-18	diffpriv	Easy Differential Privacy
2017-07-18	ouch	Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2017-07-18	RcppAPT	'Rcpp' Interface to the APT Package Manager
2017-07-18	riverdist	River Network Distance Computation and Applications
2017-07-18	rodham	Fetch Hillary Rodham Clinton's Emails
2017-07-18	social	Social Autocorrelation
2017-07-18	toOrdinal	Cardinal to Ordinal Number Conversion
2017-07-18	wfe	Weighted Linear Fixed Effects Regression Models for Causal Inference
2017-07-17	brlrmr	Bias Reduction with Missing Binary Response
2017-07-17	Census2016	Data from the Australian Census 2016
2017-07-17	cnbdistr	Conditional Negative Binomial Distribution
2017-07-17	corr2D	Implementation of 2D Correlation Analysis in R
2017-07-17	ercv	Fitting Tails by the Empirical Residual Coefficient of Variation
2017-07-17	flexsurvcure	Flexible Parametric Cure Models
2017-07-17	fragilityindex	Fragility Index
2017-07-17	Hotelling	Hotelling's T^2 Test and Variants
2017-07-17	LCox	A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data
2017-07-17	PearsonDS	Pearson Distribution System
2017-07-17	sergeant	Tools to Transform and Query Data with 'Apache' 'Drill'
2017-07-17	timeSeq	Detecting Differentially Expressed Genes in Time Course RNA-Seq Data
2017-07-16	gh	'GitHub' 'API'
2017-07-16	llogistic	The L-Logistic Distribution
2017-07-16	paco	Procrustes Application to Cophylogenetic Analysis
2017-07-16	senstrat	Sensitivity Analysis for Stratified Observational Studies
2017-07-16	vembedr	Functions to Embed Video in HTML
2017-07-15	centiserve	Find Graph Centrality Indices
2017-07-15	docker	Wraps Docker Python SDK
2017-07-15	DrImpute	Imputing Dropout Events in Single-Cell RNA-Sequencing Data
2017-07-15	randomForestExplainer	Explaining and Visualizing Random Forests in Terms of Variable Importance
2017-07-15	spongecake	Transform a Movie into a Synthetic Picture
2017-07-15	tetraclasse	Satisfaction Analysis using Tetraclasse Model and Llosa Matrix
2017-07-15	TSF	Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break
2017-07-14	BimodalIndex	The Bimodality Index
2017-07-14	ClustGeo	Hierarchical Clustering with Spatial Constraints
2017-07-14	credsubs	Credible Subsets
2017-07-14	geotoolsR	Tools to Improve the Use of Geostatistic
2017-07-14	grt	General Recognition Theory
2017-07-14	mize	Unconstrained Numerical Optimization Algorithms
2017-07-13	ecodist	Dissimilarity-Based Functions for Ecological Analysis
2017-07-13	ICEbox	Individual Conditional Expectation Plot Toolbox
2017-07-13	interfr	Interference Color Charts for Polarized Light Microscopy
2017-07-13	mountainplot	Mountain Plots, Folded Empirical Cumulative Distribution Plots
2017-07-13	mwaved	Multichannel Wavelet Deconvolution with Additive Long Memory Noise
2017-07-13	noaastormevents	Explore NOAA Storm Events Database
2017-07-13	pagenum	Put Page Numbers on Graphics
2017-07-13	RPresto	DBI Connector to Presto
2017-07-13	UBL	An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks
2017-07-12	BayesianNetwork	Bayesian Network Modeling and Analysis
2017-07-12	CEGO	Combinatorial Efficient Global Optimization
2017-07-12	ClassDiscovery	Classes and Methods for "Class Discovery" with Microarrays or Proteomics
2017-07-12	facebook.S4	Access to Facebook API V2 via a Set of S4 Classes
2017-07-12	hommel	Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method
2017-07-12	interim	Scheduling Interim Analyses in Clinical Trials
2017-07-12	JOUSBoost	Implements Under/Oversampling for Probability Estimation
2017-07-12	MAVIS	Meta Analysis via Shiny
2017-07-12	rLiDAR	LiDAR Data Processing and Visualization
2017-07-12	SmoothHazard	Estimation of Smooth Hazard Models for Interval-Censored Data with Applications to Survival and Illness-Death Models
2017-07-11	GenomicTools	Collection of Tools for Genomic Data Analysis
2017-07-11	integIRTy	Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory
2017-07-11	mediation	Causal Mediation Analysis
2017-07-11	multgee	GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
2017-07-11	NameNeedle	Using Needleman-Wunsch to Match Sample Names
2017-07-11	onion	Octonions and Quaternions
2017-07-11	qcc	Quality Control Charts
2017-07-11	roots	Reconstructing Ordered Ontogenic Trajectories
2017-07-11	samplingVarEst	Sampling Variance Estimation
2017-07-11	SensusR	Sensus Analytics
2017-07-11	ShrinkCovMat	Shrinkage Covariance Matrix Estimators
2017-07-11	VRPM	Visualizing Risk Prediction Models
2017-07-10	AutoDeskR	An Interface to the 'AutoDesk' 'API' Platform
2017-07-10	dGAselID	Genetic Algorithm with Incomplete Dominance for Feature Selection
2017-07-10	ecr	Evolutionary Computation in R
2017-07-10	FUNLDA	Genomic Latent Dirichlet Allocation
2017-07-10	KRLS	Kernel-Based Regularized Least Squares
2017-07-10	MitISEM	Mixture of Student t Distributions using Importance Sampling and Expectation Maximization
2017-07-10	netcom	Dynamic Network Alignment
2017-07-10	OAIHarvester	Harvest Metadata Using OAI-PMH Version 2.0
2017-07-10	oompaData	Data to Illustrate OOMPA Algorithms
2017-07-10	PoloniexR	Interface to the Poloniex Cryptocurrency Trading API
2017-07-10	SFS	Similarity-First Search Seriation Algorithm
2017-07-10	varSelRF	Variable Selection using Random Forests
2017-07-09	Ckmeans.1d.dp	Optimal and Fast Univariate Clustering
2017-07-09	CRTgeeDR	Doubly Robust Inverse Probability Weighted Augmented GEE Estimator
2017-07-09	decomposedPSF	Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
2017-07-09	fcm	Inference of Fuzzy Cognitive Maps (FCMs)
2017-07-09	gmnl	Multinomial Logit Models with Random Parameters
2017-07-09	lpdensity	Local Polynomial Density Estimation and Inference
2017-07-09	mthapower	Sample Size and Post-Hoc Power of Association Studies Involving Mitochondrial DNA Haplogroups
2017-07-09	postlightmercury	Parses Web Pages using Postlight Mercury
2017-07-09	survHE	Survival Analysis in Health Economic Evaluation
2017-07-08	fcuk	The Ultimate Helper for Clumsy Fingers
2017-07-08	ggplotgui	Create Ggplots via a Graphical User Interface
2017-07-08	GofKmt	Khmaladze Martingale Transformation Goodness-of-Fit Test
2017-07-08	l1kdeconv	Deconvolution for LINCS L1000 Data
2017-07-08	mixlink	Mixture Link Regression
2017-07-08	waccR	Cost of Capital by Sector Data
2017-07-07	BNPMediation	Bayesian Nonparametric Method for Mediation
2017-07-07	HBP	Hi-C BED File Analysis Pipeline
2017-07-07	LCMCR	Bayesian Non-Parametric Latent-Class Capture-Recapture
2017-07-07	partitions	Additive Partitions of Integers
2017-07-07	SobolSequence	Sobol Sequences with Better Two-Dimensional Projections
2017-07-07	subniche	Within Outlying Mean Indexes: Refining the OMI Analysis
2017-07-07	textile	Textile Images
2017-07-06	Autoplotprotein	Development of Visualization Tools for Protein Sequence
2017-07-06	correlbinom	Correlated Binomial Probabilities
2017-07-06	ggChernoff	Chernoff Faces for 'ggplot2'
2017-07-06	mandelbrot	Generates Views on the Mandelbrot Set
2017-07-06	Robocoap	Generation of Dynamic Coappearance Matrices Within Texts
2017-07-06	statar	Tools Inspired by 'Stata' to Manipulate Tabular Data
2017-07-05	assocInd	Implements New and Existing Association Indices for Constructing Animal Social Networks
2017-07-05	awspack	Amazon Web Services Bundle Package
2017-07-05	bingat	Binary Graph Analysis Tools
2017-07-05	catSurv	Computerized Adaptive Testing for Survey Research
2017-07-05	coxphSGD	Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
2017-07-05	HMPTrees	Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
2017-07-05	landscapeR	Categorical Landscape Simulation Facility
2017-07-05	midas	Turn HTML 'Shiny'
2017-07-05	moko	Multi-Objective Kriging Optimization
2017-07-05	numGen	Number Series Generator
2017-07-05	SuperGauss	Superfast Likelihood Inference for Stationary Gaussian Time Series
2017-07-04	aws.cloudtrail	AWS CloudTrail Client Package
2017-07-04	aws.sns	AWS SNS Client Package
2017-07-04	aws.sqs	AWS SQS Client Package
2017-07-04	BayesBinMix	Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions
2017-07-04	cepR	Busca CEPs Brasileiros
2017-07-04	cleangeo	Cleaning Geometries from Spatial Objects
2017-07-04	elhmc	Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo
2017-07-04	GameTheory	Cooperative Game Theory
2017-07-04	knitcitations	Citations for 'Knitr' Markdown Files
2017-07-04	mcmcse	Monte Carlo Standard Errors for MCMC
2017-07-04	MDplot	Visualising Molecular Dynamics Analyses
2017-07-04	plotSEMM	Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models
2017-07-04	prereg	R Markdown Templates to Preregister Scientific Studies
2017-07-04	rintrojs	Wrapper for the 'Intro.js' Library
2017-07-04	rococo	Robust Rank Correlation Coefficient and Test
2017-07-04	SSM	Fit and Analyze Smooth Supersaturated Models
2017-07-04	wql	Exploring Water Quality Monitoring Data
2017-07-03	aurelius	Generates PFA Documents from R Code and Optionally Runs Them
2017-07-03	bcROCsurface	Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
2017-07-03	CovSelHigh	Model-Free Covariate Selection in High Dimensions
2017-07-03	Distance	Distance Sampling Detection Function and Abundance Estimation
2017-07-03	ecolottery	Coalescent-Based Simulation of Ecological Communities
2017-07-03	mnis	Easy Downloading Capabilities for the Members' Name Information Service
2017-07-03	RcmdrPlugin.BiclustGUI	'Rcmdr' Plug-in GUI for Biclustering
2017-07-03	sos	Search Contributed R Packages, Sort by Package
2017-07-03	virtualspecies	Generation of Virtual Species Distributions
2017-07-02	autoBagging	Learning to Rank Bagging Workflows with Metalearning
2017-07-02	aws.lambda	AWS Lambda Client Package
2017-07-02	gdns	Tools to Work with Google DNS Over HTTPS API
2017-07-02	geoSpectral	Classes and Methods for Working with Spectral Data with Space-Time Attributes
2017-07-02	hurdlr	Zero-Inflated and Hurdle Modelling Using Bayesian Inference
2017-07-02	kgschart	KGS Rank Graph Parser
2017-07-02	quickregression	Quick Linear Regression
2017-07-02	rsoi	El Nino/Southern Oscillation (ENSO) and Related Climate Indices
2017-07-02	twang	Toolkit for Weighting and Analysis of Nonequivalent Groups
2017-07-01	aws.iam	AWS IAM Client Package
2017-07-01	bsam	Bayesian State-Space Models for Animal Movement
2017-07-01	chunked	Chunkwise Text-File Processing for 'dplyr'
2017-07-01	confidence	Confidence Estimation of Environmental State Classifications
2017-07-01	fence	Using Fence Methods for Model Selection
2017-07-01	hbdct	Hierarchical Bayesian Design for Clinical Trials
2017-07-01	Lock5Data	Datasets for "Statistics: UnLocking the Power of Data"
2017-07-01	MicroMacroMultilevel	Micro-Macro Multilevel Modeling
2017-07-01	SkyWatchr	Search and Download Satellite Imagery using the SkyWatch API
2017-06-30	BiBitR	R Wrapper for Java Implementation of BiBit
2017-06-30	bibtex	Bibtex Parser
2017-06-30	hhh4contacts	Age-Structured Spatio-Temporal Models for Infectious Disease Counts
2017-06-30	mcPAFit	Estimating Preferential Attachment from a Single Network Snapshot by Markov Chain Monte Carlo
2017-06-30	multimark	Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
2017-06-30	OpasnetUtils	Opasnet Modelling Environment Utility Functions
2017-06-30	osmplotr	Bespoke Images of 'OpenStreetMap' Data
2017-06-30	scpm	An R Package for Spatial Smoothing
2017-06-30	StratifiedRF	Builds Trees by Sampling Variables in Groups
2017-06-29	BradleyTerryScalable	Fits the Bradley-Terry Model to Potentially Large and Sparse Networks of Comparison Data
2017-06-29	brglm	Bias Reduction in Binomial-Response Generalized Linear Models
2017-06-29	catmap	Case-Control and TDT Meta-Analysis Package
2017-06-29	circular	Circular Statistics
2017-06-29	gsloid	Global Sea Level and Oxygen Isotope Data
2017-06-29	kazaam	Tools for Tall Distributed Matrices
2017-06-29	My.stepwise	Stepwise Variable Selection Procedures for Regression Analysis
2017-06-29	pinnacle.data	Market Odds Data from Pinnacle
2017-06-29	treethresh	Methods for Tree-Based Local Adaptive Thresholding
2017-06-28	assertable	Verbose Assertions for Tabular Data (Data.frames and Data.tables)
2017-06-28	ExpRep	Experiment Repetitions
2017-06-28	ForecastFramework	A Basis for Modular Model Creation
2017-06-28	goldi	Gene Ontology Label Discernment and Identification
2017-06-28	ppcc	Probability Plot Correlation Coefficient Test
2017-06-28	psbcGroup	Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors
2017-06-28	rkafka	Using Apache 'Kafka' Messaging Queue Through 'R'
2017-06-28	SFtools	Space Filling Based Tools for Data Mining
2017-06-28	sparsio	I/O Operations with Sparse Matrices
2017-06-28	sqldf	Manipulate R Data Frames Using SQL
2017-06-27	BRugs	Interface to the 'OpenBUGS' MCMC Software
2017-06-27	FSTpackage	Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores
2017-06-27	gmediation	Mediation Analysis for Multiple and Multi-Stage Mediators
2017-06-27	NCSampling	Nearest Centroid (NC) Sampling
2017-06-27	Opportunistic	Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network
2017-06-27	otrimle	Robust Model-Based Clustering
2017-06-27	pleio	Pleiotropy Test for Multiple Traits on a Genetic Marker
2017-06-26	BayesTwin	Bayesian Analysis of Item-Level Twin Data
2017-06-26	CRANsearcher	RStudio Addin for Searching Packages in CRAN Database Based on Keywords
2017-06-26	intRvals	Analysis of Time-Ordered Event Data with Missed Observations
2017-06-26	plater	Read, Tidy, and Display Data from Microtiter Plates
2017-06-26	pltesim	Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence
2017-06-26	rattle.data	Rattle Datasets
2017-06-26	twfy	Drive the API for TheyWorkForYou
2017-06-25	endorse	Bayesian Measurement Models for Analyzing Endorsement Experiments
2017-06-25	net.security	Security Standards Data Sets
2017-06-25	tidygenomics	Tidy Verbs for Dealing with Genomic Data Frames
2017-06-25	TPEA	A Novel Topology-Based Pathway Enrichment Analysis Approach
2017-06-25	usdm	Uncertainty Analysis for Species Distribution Models
2017-06-24	aSPU	Adaptive Sum of Powered Score Test
2017-06-24	DZEXPM	Estimation and Prediction of Skewed Spatial Processes
2017-06-24	MultiSkew	Measures, Tests and Removes Multivariate Skewness
2017-06-24	RPostgreSQL	R Interface to the 'PostgreSQL' Database System
2017-06-24	stacomirtools	'ODBC' Connection Class for Package stacomiR
2017-06-23	BCgee	Bias-Corrected Estimates for Generalized Linear Models for Dependent Data
2017-06-23	corset	Arbitrary Bounding of Series and Time Series Objects
2017-06-23	fsia	Import and Analysis of OMR Data from FormScanner
2017-06-23	imputeTestbench	Test Bench for the Comparison of Imputation Methods
2017-06-23	JumpTest	Financial Jump Detection
2017-06-23	m2r	Macaulay2 in R
2017-06-23	mljar	R API for MLJAR
2017-06-23	nlsrk	Runge-Kutta Solver for Function nls()
2017-06-23	rem	Relational Event Models (REM)
2017-06-23	SCAT	Summary based Conditional Association Test
2017-06-23	spsann	Optimization of Sample Configurations using Spatial Simulated Annealing
2017-06-23	surv2sampleComp	Inference for Model-Free Between-Group Parameters for Censored Survival Data
2017-06-23	webutils	Utility Functions for Developing Web Applications
2017-06-22	metafor	Meta-Analysis Package for R
2017-06-22	MOQA	Basic Quality Data Assurance for Epidemiological Research
2017-06-22	rMouse	Automate Mouse Clicks and Send Keyboard Input
2017-06-22	rrcov3way	Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data
2017-06-22	swapClass	A Null Model Adapted to Abundance Class Data in Ecology
2017-06-21	CFC	Cause-Specific Framework for Competing-Risk Analysis
2017-06-21	ftDK	A Wrapper for the API of the Danish Parliament
2017-06-21	mpoly	Symbolic Computation and More with Multivariate Polynomials
2017-06-21	neotoma	Access to the Neotoma Paleoecological Database Through R
2017-06-21	rstream	Streams of Random Numbers
2017-06-21	sessioninfo	R Session Information
2017-06-20	anchoredDistr	Post-Processing for the Method of Anchored Distributions
2017-06-20	distillery	Method Functions for Confidence Intervals and to Distill Information from an Object
2017-06-20	mssqlR	MSSQL Querying using R
2017-06-20	POMaSPU	Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU)
2017-06-20	qdapTools	Tools for the 'qdap' Package
2017-06-20	rcoreoa	Client for the CORE API
2017-06-20	RcppCCTZ	'Rcpp' Bindings for the 'CCTZ' Library
2017-06-20	rematch2	Tidy Output from Regular Expression Matching
2017-06-20	rkafkajars	External Jars Required for Package 'rkafka'
2017-06-20	RLeafAngle	Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients
2017-06-20	taxizedb	Tools for Working with 'Taxonomic' Databases
2017-06-20	ukbabynames	UK Baby Names Data
2017-06-20	WeightedCluster	Clustering of Weighted Data
2017-06-19	AICcmodavg	Model Selection and Multimodel Inference Based on (Q)AIC(c)
2017-06-19	clinPK	Clinical Pharmacokinetics Toolkit
2017-06-19	namedCapture	Named Capture Regular Expressions
2017-06-19	PCovR	Principal Covariates Regression
2017-06-19	PeakError	Compute the Annotation Error of Peak Calls
2017-06-19	Rdroolsjars	Rdrools JARs
2017-06-19	sciplot	Scientific Graphing Functions for Factorial Designs
2017-06-19	sfadv	Advanced Methods for Stochastic Frontier Analysis
2017-06-19	unvotes	United Nations General Assembly Voting Data
2017-06-18	forecastSNSTS	Forecasting for Stationary and Non-Stationary Time Series
2017-06-18	processmonitR	Building Process Monitoring Dashboards
2017-06-18	statmod	Statistical Modeling
2017-06-17	ECFsup	Equal Covariance Functions Testing by L2-Norm and Sup-Norm
2017-06-17	R6	Classes with Reference Semantics
2017-06-17	secret	Share Sensitive Information in R Packages
2017-06-17	snowFT	Fault Tolerant Simple Network of Workstations
2017-06-16	CityWaterBalance	Track Flows of Water Through an Urban System
2017-06-16	eiCompare	Compares EI, Goodman, RxC Estimates
2017-06-16	phenopix	Process Digital Images of a Vegetation Cover
2017-06-16	pipe.design	Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
2017-06-15	baseballDBR	Sabermetrics and Advanced Baseball Statistics
2017-06-15	dataverse	Client for Dataverse 4 Repositories
2017-06-15	GeoRange	Calculating Geographic Range from Occurrence Data
2017-06-15	mccr	The Matthews Correlation Coefficient
2017-06-15	nneo	'NEON' 'API' Client
2017-06-15	overlapping	Estimation of Overlapping in Empirical Distributions
2017-06-15	pleiades	Interface to the 'Pleiades' 'Archeological' Database
2017-06-15	TANDEM	A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types
2017-06-15	zooaRchGUI	Interactive Analytical Tools for Zooarchaeological Data
2017-06-14	analytics	Regression Outlier Detection, Stationary Bootstrap, Testing Weak Stationarity, and Other Tools for Data Analysis
2017-06-14	flacco	Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems
2017-06-14	nscprepr	Prepares and Writes Files to Submit to the National Student Clearinghouse
2017-06-14	redR	REgularization by Denoising (RED)
2017-06-14	ZIBseq	Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression
2017-06-13	cmna	Computational Methods for Numerical Analysis
2017-06-13	d3Tree	Create Interactive Collapsible Trees with the JavaScript 'D3' Library
2017-06-13	gamesGA	Genetic Algorithm for Sequential Symmetric Games
2017-06-13	MfUSampler	Multivariate-from-Univariate (MfU) MCMC Sampler
2017-06-13	muRL	Mailmerge using R, LaTeX, and the Web
2017-06-13	UNF	Tools for Creating Universal Numeric Fingerprints for Data
2017-06-12	argon2	Secure Password Hashing
2017-06-12	FAmle	Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
2017-06-12	fastICA	FastICA Algorithms to Perform ICA and Projection Pursuit
2017-06-12	mix	Estimation/Multiple Imputation for Mixed Categorical and Continuous Data
2017-06-12	patternator	Feature Extraction from Female Brown Anole Lizard Dorsal Patterns
2017-06-12	polyapost	Simulating from the Polya Posterior
2017-06-12	pspline	Penalized Smoothing Splines
2017-06-12	qualV	Qualitative Validation Methods
2017-06-12	rcdd	Computational Geometry
2017-06-12	SanFranBeachWater	Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data
2017-06-12	standardize	Tools for Standardizing Variables for Regression in R
2017-06-11	featurizer	Some Helper Functions that Help Create Features from Data
2017-06-11	orderstats	Efficiently Generates Random Order Statistic Variables
2017-06-11	pse	Parameter Space Exploration with Latin Hypercubes
2017-06-11	rcdklibs	The CDK Libraries Packaged for R
2017-06-10	colorpatch	Optimized Rendering of Fold Changes and Confidence Values
2017-06-10	GIGrvg	Random Variate Generator for the GIG Distribution
2017-06-10	janeaustenr	Jane Austen's Complete Novels
2017-06-10	RNetLogo	Provides an Interface to the Agent-Based Modelling Platform 'NetLogo'
2017-06-10	soptdmaeA	Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments
2017-06-09	permPATH	Permutation Based Gene Expression Pathway Analysis
2017-06-09	plfm	Probabilistic Latent Feature Analysis
2017-06-08	DLASSO	Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models
2017-06-08	frequencies	Create Frequency Tables with Counts and Rates
2017-06-08	getmstatistic	Quantifying Systematic Heterogeneity in Meta-Analysis
2017-06-08	kzfs	Multi-Scale Motions Separation with Kolmogorov-Zurbenko Periodogram Signals
2017-06-08	listWithDefaults	List with Defaults
2017-06-08	milr	Multiple-Instance Logistic Regression with LASSO Penalty
2017-06-08	mixEMM	A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable Missing Data
2017-06-08	msmtools	Building Augmented Data to Run Multi-State Models with 'msm' Package
2017-06-08	Risk	Computes 26 Financial Risk Measures for Any Continuous Distribution
2017-06-08	RSmartlyIO	Loading Facebook and Instagram Advertising Data from 'Smartly.io'
2017-06-08	Tinflex	A Universal Non-Uniform Random Number Generator
2017-06-08	xsp	The Chi-Square Periodogram
2017-06-07	gqlr	'GraphQL' Server in R
2017-06-07	hapsim	Haplotype Data Simulation
2017-06-07	influence.ME	Tools for Detecting Influential Data in Mixed Effects Models
2017-06-07	iNOTE	Integrative Network Omnibus Total Effect Test
2017-06-07	SPEI	Calculation of the Standardised Precipitation-Evapotranspiration Index
2017-06-07	ZeligChoice	Zelig Choice Models
2017-06-07	ZeligEI	Zelig Ecological Inference Models
2017-06-06	BAYESDEF	Bayesian Analysis of DSD
2017-06-06	bdlp	Transparent and Reproducible Artificial Data Generation
2017-06-06	covfefe	Covfefy Any Word, Sentence or Speech
2017-06-06	cquad	Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
2017-06-06	electionsBR	R Functions to Download and Clean Brazilian Electoral Data
2017-06-06	gamlssbssn	Bimodal Skew Symmetric Normal Distribution
2017-06-06	gdata	Various R Programming Tools for Data Manipulation
2017-06-06	gghalfnorm	Create a Half Normal Plot Using 'ggplot2'
2017-06-06	gquad	Prediction of G Quadruplexes and Other Non-B DNA Motifs
2017-06-06	HDCI	High Dimensional Confidence Interval Based on Lasso and Bootstrap
2017-06-06	iadf	Analysis of Intra Annual Density Fluctuations
2017-06-06	MultiLCIRT	Multidimensional Latent Class Item Response Theory Models
2017-06-06	nomclust	Hierarchical Nominal Clustering Package
2017-06-06	piton	Parsing Expression Grammars in Rcpp
2017-06-06	pwrAB	Power Analysis for AB Testing
2017-06-06	randomNames	Function for Generating Random Names and a Dataset
2017-06-06	RISmed	Download Content from NCBI Databases
2017-06-06	rpst	Recursive Partitioning Survival Trees
2017-06-06	themetagenomics	Exploring Thematic Structure and Predicted Functionality of 16s rRNA Amplicon Data
2017-06-06	zstdr	R Bindings to the 'Zstandard' Compression Library
2017-06-05	capn	Capital Asset Pricing for Nature
2017-06-05	imaginator	Simulate General Insurance Policies and Losses
2017-06-05	netassoc	Inference of Species Associations from Co-Occurrence Data
2017-06-05	pvclass	P-Values for Classification
2017-06-04	edgar	Platform for EDGAR Filing Management
2017-06-03	ck37r	Chris Kennedy's R Toolkit
2017-06-03	eesim	Simulate and Evaluate Time Series for Environmental Epidemiology
2017-06-03	glmertree	Generalized Linear Mixed Model Trees
2017-06-03	KRMM	Kernel Ridge Mixed Model
2017-06-03	NB.MClust	Negative Binomial Model-Based Clustering
2017-06-03	smcfcs	Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2017-06-02	CADFtest	A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests
2017-06-02	deductive	Data Correction and Imputation Using Deductive Methods
2017-06-02	glmbb	All Hierarchical or Graphical Models for Generalized Linear Model
2017-06-02	hypersampleplan	Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials
2017-06-02	logOfGamma	Natural Logarithms of the Gamma Function for Large Values
2017-06-02	nearfar	Near-Far Matching
2017-06-02	PHENIX	Phenotypic Integration Index
2017-06-02	spdplyr	Data Manipulation Verbs for the Spatial Classes
2017-06-02	webglobe	3D Interactive Globes
2017-06-01	CARBayes	Spatial Generalised Linear Mixed Models for Areal Unit Data
2017-06-01	jsonlite	A Robust, High Performance JSON Parser and Generator for R
2017-06-01	kerasR	R Interface to the Keras Deep Learning Library
2017-06-01	popsom	Functions for Constructing and Evaluating Self-Organizing Maps
2017-06-01	QPBoot	Model Validation using Quantile Spectral Analysis and Parametric Bootstrap
2017-06-01	qtlcharts	Interactive Graphics for QTL Experiments
2017-06-01	SCVA	Single-Case Visual Analysis
2017-05-31	baitmet	Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data
2017-05-31	difconet	Differential Coexpressed Networks
2017-05-31	ElastH	Replicar metodologia de SPE/MF para calculo de elasticidade de receita
2017-05-31	genpathmox	Generalized Pathmox Approach Segmentation Tree Analysis
2017-05-31	ids	Generate Random Identifiers
2017-05-31	ImaginR	Delimit and Characterize Color Phenotype of the Pearl Oyster
2017-05-31	kernDeepStackNet	Kernel Deep Stacking Networks
2017-05-31	logistic4p	Logistic Regression with Misclassification in Dependent Variables
2017-05-31	pencopulaCond	Estimating Non-Simplified Vine Copulas Using Penalized Splines
2017-05-31	rangeBuilder	Occurrence Filtering, Geographic and Taxonomic Standardization and Generation of Species Range Polygons
2017-05-30	cocoreg	Extract Shared Variation in Collections of Data Sets Using Regression Models
2017-05-30	CpGassoc	Association Between Methylation and a Phenotype of Interest
2017-05-30	forestFloor	Visualizes Random Forests with Feature Contributions
2017-05-30	mdpeer	Graph-Constrained Regression with Enhanced Regularization Parameters Selection
2017-05-30	sisVIVE	Some Invalid Some Valid Instrumental Variables Estimator
2017-05-29	DDM	Death Registration Coverage Estimation
2017-05-29	dfCompare	Compare Two Dataframes and Return Adds, Changes, and Deletes
2017-05-29	multivator	A Multivariate Emulator
2017-05-29	phenex	Auxiliary Functions for Phenological Data Analysis
2017-05-29	phrasemachine	Simple Phrase Extraction
2017-05-29	RGoogleFit	R Interface to Google Fit API
2017-05-29	rLTP	R Interface to the 'LTP'-Cloud Service
2017-05-29	robumeta	Robust Variance Meta-Regression
2017-05-29	squash	Color-Based Plots for Multivariate Visualization
2017-05-28	here	A Simpler Way to Find Your Files
2017-05-28	SmartSVA	Fast and Robust Surrogate Variable Analysis
2017-05-27	didrooRFM	Compute Recency Frequency Monetary Scores for your Customer Data
2017-05-27	MIICD	Multiple Imputation for Interval Censored Data
2017-05-27	polypoly	Helper Functions for Orthogonal Polynomials
2017-05-27	SeerMapper	A Quick Way to Map U.S. Rates and Data of U. S. States, Counties, Census Tracts, or Seer Registries using 2000 and 2010 U. S. Census Boundaries
2017-05-27	stratvns	Optimal Stratification in Stratified Sampling Optimization Algorithm
2017-05-27	tablaxlsx	Write Formatted Tables in Excel Workbooks
2017-05-27	tsoutliers	Detection of Outliers in Time Series
2017-05-26	CharFun	Numerical Computation Cumulative Distribution Function and Probability Density Function from Characteristic Function
2017-05-26	knotR	Knot Diagrams using Bezier Curves
2017-05-26	ldbod	Local Density-Based Outlier Detection
2017-05-26	stratbr	Optimal Stratification in Stratified Sampling
2017-05-26	tictactoe	Tic-Tac-Toe Game
2017-05-25	amen	Additive and Multiplicative Effects Models for Networks and Relational Data
2017-05-25	apng	Convert Png Files into Animated Png
2017-05-25	biotools	Tools for Biometry and Applied Statistics in Agricultural Science
2017-05-25	eechidna	Exploring Election and Census Highly Informative Data Nationally for Australia
2017-05-25	RAMP	Regularized Generalized Linear Models with Interaction Effects
2017-05-25	rdoxygen	Create Doxygen Documentation for Source Code
2017-05-25	Rfacebook	Access to Facebook API via R
2017-05-25	soilphysics	Soil Physical Analysis
2017-05-25	spray	Sparse Arrays and Multivariate Polynomials
2017-05-25	timelineR	Visualization for Time Series Data
2017-05-25	TriadSim	Simulating Triad Genomewide Genotypes
2017-05-24	ARTP2	Pathway and Gene-Level Association Test
2017-05-24	lans2r	Work with Look at NanoSIMS Data in R
2017-05-24	wally	The Wally Calibration Plot for Risk Prediction Models
2017-05-24	x.ent	eXtraction of ENTity
2017-05-23	FLLat	Fused Lasso Latent Feature Model
2017-05-23	multisom	Clustering a Data Set using Multi-SOM Algorithm
2017-05-23	RHPCBenchmark	Benchmarks for High-Performance Computing Environments
2017-05-23	RNAstructureModuleMiner	RNA Secondary Structure Comparison and Module Mining
2017-05-23	ROI.models.miplib	R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances
2017-05-23	rpatrec	Recognising Visual Charting Patterns in Time Series Data
2017-05-23	samplingbook	Survey Sampling Procedures
2017-05-23	SubVis	Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices
2017-05-23	xLLiM	High Dimensional Locally-Linear Mapping
2017-05-22	carpenter	Build Common Tables of Summary Statistics for Reports
2017-05-22	Rd2md	Markdown Reference Manuals
2017-05-22	sotu	United States Presidential State of the Union Addresses
2017-05-21	clisymbols	Unicode Symbols at the R Prompt
2017-05-21	IgorR	Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)
2017-05-21	NPMOD	Non Parametric Module
2017-05-21	plfMA	A GUI to View, Design and Export Various Graphs of Data
2017-05-21	rngWELL	Toolbox for WELL Random Number Generators
2017-05-19	AHMbook	Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology'
2017-05-19	bgeva	Binary Generalized Extreme Value Additive Models
2017-05-19	CALF	Coarse Approximation Linear Function
2017-05-19	CATT	The Cochran-Armitage Trend Test
2017-05-19	checkarg	Check the Basic Validity of a (Function) Argument
2017-05-19	covRobust	Robust Covariance Estimation via Nearest Neighbor Cleaning
2017-05-19	ipdw	Spatial Interpolation by Inverse Path Distance Weighting
2017-05-19	kdevine	Multivariate Kernel Density Estimation with Vine Copulas
2017-05-19	MIIVsem	Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models
2017-05-19	numKM	Create a Kaplan-Meier Plot with Numbers at Risk
2017-05-19	poisbinom	A Faster Implementation of the Poisson-Binomial Distribution
2017-05-19	printr	Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format
2017-05-19	simputation	Simple Imputation
2017-05-18	afc	Generalized Discrimination Score
2017-05-18	complexplus	Functions of Complex or Real Variable
2017-05-18	flexrsurv	Flexible Relative Survival Analysis
2017-05-18	GESE	Gene-Based Segregation Test
2017-05-18	GUIgems	Graphical User Interface for Generalized Multistate Simulation Model
2017-05-18	mixKernel	Omics Data Integration Using Kernel Methods
2017-05-18	powerplus	Exponentiation Operations
2017-05-18	REDCapR	Interaction Between R and REDCap
2017-05-18	Rglpk	R/GNU Linear Programming Kit Interface
2017-05-18	rmdformats	HTML Output Formats and Templates for 'rmarkdown' Documents
2017-05-18	SSRMST	Sample Size Calculation using Restricted Mean Survival Time
2017-05-18	wCorr	Weighted Correlations
2017-05-17	easyNCDF	Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays
2017-05-17	ROI.plugin.ipop	ROI Plug-in {ipop}
2017-05-17	ROI.plugin.quadprog	ROI Plug-in {quadprog}
2017-05-17	ROI.plugin.symphony	ROI Plug-in SYMPHONY
2017-05-17	SemiParSampleSel	Semi-Parametric Sample Selection Modelling with Continuous or Discrete Response
2017-05-17	zeligverse	Easily Install and Load Stable Zelig Packages
2017-05-16	distcomp	Computations over Distributed Data without Aggregation
2017-05-16	ExcessMass	Excess Mass Calculation and Plots
2017-05-16	FatTailsR	Kiener Distributions and Fat Tails in Finance
2017-05-16	geoparser	Interface to the Geoparser.io API for Identifying and Disambiguating Places Mentioned in Text
2017-05-16	PROscorer	Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments
2017-05-16	readr	Read Rectangular Text Data
2017-05-16	rif	Client for 'Neuroscience' Information Framework 'APIs'
2017-05-16	rqPen	Penalized Quantile Regression
2017-05-16	sotkanet	Sotkanet Open Data Access and Analysis
2017-05-15	coreSim	Core Functionality for Simulating Quantities of Interest from Generalised Linear Models
2017-05-15	fourierin	Computes Numeric Fourier Integrals
2017-05-15	PairwiseD	Pairing Up Units and Vectors in Panel Data Setting
2017-05-15	PROscorerTools	Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures
2017-05-15	RBPcurve	The Residual-Based Predictiveness Curve
2017-05-15	simPH	Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models
2017-05-15	slim	Singular Linear Models for Longitudinal Data
2017-05-15	unmarked	Models for Data from Unmarked Animals
2017-05-14	anim.plots	Simple Animated Plots for R
2017-05-14	gomms	GLM-Based Ordination Method
2017-05-14	GSIF	Global Soil Information Facilities
2017-05-14	missDeaths	Simulating and Analyzing Time to Event Data in the Presence of Population Mortality
2017-05-14	pacman	Package Management Tool
2017-05-14	plotKML	Visualization of Spatial and Spatio-Temporal Objects in Google Earth
2017-05-14	QZ	Generalized Eigenvalues and QZ Decomposition
2017-05-13	GEEmediate	Mediation Analysis for Generalized Linear Models Using the Difference Method
2017-05-13	inflection	Finds the Inflection Point of a Curve
2017-05-13	learnrbook	Datasets for Aphalo's "Learn R" Book
2017-05-13	mbgraphic	Measure Based Graphic Selection
2017-05-13	sudokuAlt	Tools for Making and Spoiling Sudoku Games
2017-05-12	diffMeshGP	Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
2017-05-12	EpistemicGameTheory	Constructing an Epistemic Model for the Games with Two Players
2017-05-12	fastTextR	An Interface to the 'fastText' Library
2017-05-12	freqweights	Working with Frequency Tables
2017-05-12	globe	Plot 2D and 3D Views of the Earth, Including Major Coastline
2017-05-12	iGSEA	Integrative Gene Set Enrichment Analysis Approaches
2017-05-12	jocre	Joint Confidence Regions
2017-05-12	lifelogr	Life Logging
2017-05-12	modelObj	A Model Object Framework for Regression Analysis
2017-05-12	PP	Person Parameter Estimation
2017-05-12	rel	Reliability Coefficients
2017-05-12	rerddap	General Purpose Client for 'ERDDAP' Servers
2017-05-12	rivernet	Read, Analyze and Plot River Networks
2017-05-12	shinycssloaders	Add CSS Loading Animations to 'shiny' Outputs
2017-05-12	sinib	Sum of Independent Non-Identical Binomial Random Variables
2017-05-12	usedist	Distance Matrix Utilities
2017-05-11	cba	Clustering for Business Analytics
2017-05-11	EMP	Expected Maximum Profit Classification Performance Measure
2017-05-11	iECAT	Integrating External Controls into Association Test
2017-05-11	lhmixr	Fit Sex-Specific Life History Models with Missing Classifications
2017-05-11	pawls	Penalized Adaptive Weighted Least Squares Regression
2017-05-11	RGCCA	Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
2017-05-11	TransModel	Fit Linear Transformation Models for Right Censored Data
2017-05-11	WebGestaltR	The R Version of WebGestalt
2017-05-10	bnnSurvival	Bagged k-Nearest Neighbors Survival Prediction
2017-05-10	CADStat	Provides a GUI to Several Statistical Methods
2017-05-10	daff	Diff, Patch and Merge for Data.frames
2017-05-10	gastempt	Analyzing Gastric Emptying from MRI or Scintigraphy
2017-05-10	hoardr	Manage Cached Files
2017-05-10	lindia	Automated Linear Regression Diagnostic
2017-05-10	lmmot	Multiple Ordinal Tobit (MOT) Model
2017-05-10	lsasim	Functions to Facilitate the Simulation of Large Scale Assessment Data
2017-05-10	nephro	Utilities for Nephrology
2017-05-10	optband	'surv' Object Confidence Bands Optimized by Area
2017-05-10	outbreaks	A Collection of Disease Outbreak Data
2017-05-10	qrsvm	SVM Quantile Regression with the Pinball Loss
2017-05-10	RootsExtremaInflections	Finds Roots, Extrema and Inflection Points of a Curve
2017-05-10	TSdbi	Time Series Database Interface
2017-05-10	TSsql	Generic SQL Helper Functions for 'TSdbi' SQL Plugins
2017-05-09	AcuityView	A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
2017-05-09	comf	Functions for Thermal Comfort Research
2017-05-09	DIFlasso	A Penalty Approach to Differential Item Functioning in Rasch Models
2017-05-09	plotprotein	Development of Visualization Tools for Protein Sequence
2017-05-09	sourceR	Fits a Non-Parametric Bayesian Source Attribution Model
2017-05-09	TestFunctions	Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms
2017-05-09	yhatr	R Binder for the Yhat API
2017-05-08	bit64	A S3 Class for Vectors of 64bit Integers
2017-05-08	clustMD	Model Based Clustering for Mixed Data
2017-05-08	datasauRus	Datasets from the Datasaurus Dozen
2017-05-08	eemR	Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data
2017-05-08	IndianTaxCalc	Indian Income Tax Calculator
2017-05-08	MaxSkew	Orthogonal Data Projections with Maximal Skewness
2017-05-08	RPEXE.RPEXT	Reduced Piecewise Exponential Estimate/Test Software
2017-05-08	saeSim	Simulation Tools for Small Area Estimation
2017-05-07	ACEt	Estimating Dynamic Heritability and Twin Model Comparison
2017-05-07	aoos	Another Object Orientation System
2017-05-07	chi	The Chi Distribution
2017-05-07	invgamma	The Inverse Gamma Distribution
2017-05-06	efreadr	Read European Eddy Fluxes CSV Files
2017-05-06	glmmLasso	Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
2017-05-06	PROreg	Patient Reported Outcomes Regression Analysis
2017-05-06	pwr2	Power and Sample Size Analysis for One-way and Two-way ANOVA Models
2017-05-06	rnoaa	'NOAA' Weather Data from R
2017-05-06	VarfromPDB	Disease-Gene-Variant Relations Mining from the Public Databases and Literature
2017-05-05	BHMSMAfMRI	Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data
2017-05-05	capm	Companion Animal Population Management
2017-05-05	cowbell	Performs Segmented Linear Regression on Two Independent Variables
2017-05-05	crunchy	Shiny Apps on Crunch
2017-05-05	logbin	Relative Risk Regression Using the Log-Binomial Model
2017-05-05	OneR	One Rule Machine Learning Classification Algorithm with Enhancements
2017-05-05	RInside	C++ Classes to Embed R in C++ Applications
2017-05-05	RODBC	ODBC Database Access
2017-05-04	biglasso	Extending Lasso Model Fitting to Big Data
2017-05-04	compHclust	Complementary Hierarchical Clustering
2017-05-04	ContourFunctions	Create Contour Plots from Data or a Function
2017-05-04	DataGraph	Export Data from R so DataGraph can Read it
2017-05-04	dimRed	A Framework for Dimensionality Reduction
2017-05-04	idar	Individual Diversity-Area Relationships
2017-05-04	LDcorSV	Linkage Disequilibrium Corrected by the Structure and the Relatedness
2017-05-04	PBD	Protracted Birth-Death Model of Diversification
2017-05-04	seasonalview	Graphical User Interface for Seasonal Adjustment
2017-05-04	TideHarmonics	Harmonic Analysis of Tides
2017-05-04	x13binary	Provide the 'x13ashtml' Seasonal Adjustment Binary
2017-05-03	COMPoissonReg	Conway-Maxwell Poisson (COM-Poisson) Regression
2017-05-03	Corbi	Collection of Rudimentary Bioinformatics Tools
2017-05-03	kmcudaR	'Yinyang' K-Means and K-NN using NVIDIA CUDA
2017-05-03	m2b	Movement to Behaviour Inference using Random Forest
2017-05-03	matrixpls	Matrix-Based Partial Least Squares Estimation
2017-05-03	proportion	Inference on Single Binomial Proportion and Bayesian Computations
2017-05-03	qrmix	Quantile Regression Mixture Models
2017-05-02	discord	Functions for Discordant Kinship Modeling
2017-05-02	dsrTest	Tests and Confidence Intervals on Directly Standardized Rates for Several Methods
2017-05-02	KSEAapp	Kinase-Substrate Enrichment Analysis
2017-05-02	mut	Pairwise Likelihood Ratios
2017-05-02	ncdump	Extract Metadata from 'NetCDF' Files as Data Frames
2017-05-02	onehot	Fast Onehot Encoding for Data.frames
2017-05-02	seasonal	R Interface to X-13-ARIMA-SEATS
2017-05-01	anacor	Simple and Canonical Correspondence Analysis
2017-05-01	angstroms	Tools for 'ROMS' the Regional Ocean Modeling System
2017-05-01	cfa	Configural Frequency Analysis (CFA)
2017-05-01	doMPI	Foreach Parallel Adaptor for the Rmpi Package
2017-05-01	EML	Read and Write Ecological Metadata Language Files
2017-05-01	fftw	Fast FFT and DCT Based on the FFTW Library
2017-05-01	ibr	Iterative Bias Reduction
2017-05-01	MHTmult	Multiple Hypotheses Testing for Multiple Families/Groups Structure
2017-05-01	MultivariateRandomForest	Models Multivariate Cases Using Random Forests
2017-05-01	nlsem	Fitting Structural Equation Mixture Models
2017-05-01	virustotal	R Client for the VirusTotal API
2017-04-30	cubfits	Codon Usage Bias Fits
2017-04-30	DDRTree	Learning Principal Graphs with DDRTree
2017-04-30	MetaboList	Annotation of Metabolites from Liquid Chromatography-Mass Spectrometry Data
2017-04-30	pafdR	Book Companion for Processing and Analyzing Financial Data with R
2017-04-30	SPADAR	Spherical Projections of Astronomical Data
2017-04-29	antiword	Extract Text from Microsoft Word Documents
2017-04-29	ChocoLattes	Processing Data from Lattes CV Files
2017-04-29	dataseries	Switzerland's Data Series in One Place
2017-04-29	MixSim	Simulating Data to Study Performance of Clustering Algorithms
2017-04-29	mockr	Mocking in R
2017-04-29	parfm	Parametric Frailty Models
2017-04-29	pim	Fit Probabilistic Index Models
2017-04-28	aRxiv	Interface to the arXiv API
2017-04-28	casebase	Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression
2017-04-28	ConsRank	Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
2017-04-28	cts	Continuous Time Autoregressive Models
2017-04-28	flexmix	Flexible Mixture Modeling
2017-04-28	gsrsb	Group Sequential Refined Secondary Boundary
2017-04-28	homomorpheR	Homomorphic Computations in R
2017-04-28	htmltools	Tools for HTML
2017-04-28	PerMallows	Permutations and Mallows Distributions
2017-04-28	SIBER	Stable Isotope Bayesian Ellipses in R
2017-04-28	TSdist	Distance Measures for Time Series Data
2017-04-28	waterData	Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data
2017-04-28	WikidataQueryServiceR	API Client Library for 'Wikidata Query Service'
2017-04-27	aSPC	An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors
2017-04-27	bujar	Buckley-James Regression for Survival Data with High-Dimensional Covariates
2017-04-27	genie	A New, Fast, and Outlier Resistant Hierarchical Clustering Algorithm
2017-04-27	lm.br	Linear Model with Breakpoint
2017-04-27	msos	Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden
2017-04-27	mstherm	Analyze MS/MS Protein Melting Data
2017-04-27	NlcOptim	Solve Nonlinear Optimization with Nonlinear Constraints
2017-04-27	NonpModelCheck	Model Checking and Variable Selection in Nonparametric Regression
2017-04-27	robust	Port of the S+ "Robust Library"
2017-04-27	robustreg	Robust Regression Functions
2017-04-27	visualize	Graph Probability Distributions with User Supplied Parameters and Statistics
2017-04-26	bulletr	Algorithms for Matching Bullet Lands
2017-04-26	cIRT	Choice Item Response Theory
2017-04-26	coxphMIC	Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion
2017-04-26	dina	Bayesian Estimation of DINA Model
2017-04-26	fourPNO	Bayesian 4 Parameter Item Response Model
2017-04-26	IBDsim	Simulation of Chromosomal Regions Shared by Family Members
2017-04-26	md.log	Produces Markdown Log File with a Built-in Function Call
2017-04-26	plink	IRT Separate Calibration Linking Methods
2017-04-25	binomen	'Taxonomic' Specification and Parsing Methods
2017-04-25	censCov	Linear Regression with a Randomly Censored Covariate
2017-04-25	demography	Forecasting Mortality, Fertility, Migration and Population Data
2017-04-25	formatR	Format R Code Automatically
2017-04-25	gitlabr	Access to the Gitlab API
2017-04-25	RandMeta	Efficient Numerical Algorithm for Exact Inference in Meta Analysis
2017-04-25	RcppTOML	'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2017-04-25	rebus	Build Regular Expressions in a Human Readable Way
2017-04-25	rebus.base	Core Functionality for the 'rebus' Package
2017-04-25	simest	Constrained Single Index Model Estimation
2017-04-25	subspaceMOA	Interface to 'subspaceMOA'
2017-04-25	V8	Embedded JavaScript Engine for R
2017-04-25	zip	Cross-Platform 'zip' Compression
2017-04-24	ajv	Another JSON Schema Validator
2017-04-24	BarBorGradient	Function Minimum Approximator
2017-04-24	ider	Various Methods for Estimating Intrinsic Dimension
2017-04-24	lamW	Lambert-W Function
2017-04-24	nonpar	A Collection of Nonparametric Hypothesis Tests
2017-04-24	PGEE	Penalized Generalized Estimating Equations in High-Dimension
2017-04-24	ring	Circular / Ring Buffers
2017-04-24	selectapref	Analysis of Field and Laboratory Foraging
2017-04-24	sem	Structural Equation Models
2017-04-23	npROCRegression	Kernel-Based Nonparametric ROC Regression Modelling
2017-04-23	plspm	Tools for Partial Least Squares Path Modeling (PLS-PM)
2017-04-23	PSF	Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm
2017-04-23	SparseM	Sparse Linear Algebra
2017-04-22	readBrukerFlexData	Reads Mass Spectrometry Data in Bruker *flex Format
2017-04-22	startR	Automatically Retrieve Multidimensional Distributed Data Sets
2017-04-21	chemmodlab	A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models
2017-04-21	CrossScreening	Cross-Screening in Observational Studies that Test Many Hypotheses
2017-04-21	DMRMark	DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data
2017-04-21	dtplyr	Data Table Back-End for 'dplyr'
2017-04-21	KENDL	Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits
2017-04-21	memoise	Memoisation of Functions
2017-04-21	phylobase	Base Package for Phylogenetic Structures and Comparative Data
2017-04-21	regress	Gaussian Linear Models with Linear Covariance Structure
2017-04-21	RpeakChrom	Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak
2017-04-21	SADISA	Species Abundance Distributions with Independent-Species Assumption
2017-04-21	simMP	Simulate Somatic Mutations in Cancer Genomes from Mutational Processes
2017-04-21	sinaplot	An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes
2017-04-21	statGraph	Statistical Methods for Graphs
2017-04-21	unix	Unix System Utilities
2017-04-20	BIOdry	Multilevel Modeling of Dendroclimatical Fluctuations
2017-04-20	LINselect	Selection of Linear Estimators
2017-04-20	LOST	Missing Morphometric Data Simulation and Estimation
2017-04-20	markdown	'Markdown' Rendering for R
2017-04-20	PortfolioOptim	Small/Large Sample Portfolio Optimization
2017-04-20	prcbench	Testing Workbench for Precision-Recall Curves
2017-04-20	validann	Validation Tools for Artificial Neural Networks
2017-04-19	datacheckr	Data Checking
2017-04-19	DynNom	Dynamic Nomograms for Linear, Generalized Linear and Proportional Hazard Models
2017-04-19	paleomorph	Geometric Morphometric Tools for Paleobiology
2017-04-19	PCADSC	Tools for Principal Component Analysis-Based Data Structure Comparisons
2017-04-19	rAltmetric	Retrieves Altmerics Data for Any Published Paper from 'Altmetric.com'
2017-04-19	rfishbase	R Interface to 'FishBase'
2017-04-19	ss3sim	Fisheries Stock Assessment Simulation Testing with Stock Synthesis
2017-04-19	yarrr	A Companion to the e-Book "YaRrr!: The Pirate's Guide to R"
2017-04-18	acnr	Annotated Copy-Number Regions
2017-04-18	icosa	Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra
2017-04-18	longCatEDA	Package for Plotting Categorical Longitudinal and Time-Series Data
2017-04-18	QICD	Estimate the Coefficients for Non-Convex Penalized Quantile Regression Model by using QICD Algorithm
2017-04-18	Rpoppler	PDF Tools Based on Poppler
2017-04-18	SGCS	Spatial Graph Based Clustering Summaries for Spatial Point Patterns
2017-04-18	spatialsegregation	Segregation Measures for Multitype Spatial Point Patterns
2017-04-18	TSGSIS	Two Stage-Grouped Sure Independence Screening
2017-04-18	uqr	Unconditional Quantile Regression
2017-04-18	WLreg	Regression Analysis Based on Win Loss Endpoints
2017-04-17	icamix	Estimation of ICA Mixture Models
2017-04-17	largeList	Serialization Interface for Large List Objects
2017-04-17	RandomFields	Simulation and Analysis of Random Fields
2017-04-16	curvHDR	Filtering of Flow Cytometry Samples
2017-04-16	idm	Incremental Decomposition Methods
2017-04-16	mcmc	Markov Chain Monte Carlo
2017-04-16	mro	Multiple Correlation
2017-04-16	rotationForest	Fit and Deploy Rotation Forest Models
2017-04-16	splancs	Spatial and Space-Time Point Pattern Analysis
2017-04-15	captr	Client for the Captricity API
2017-04-15	complexity	Calculate the Proportion of Permutations in Line with an Informative Hypothesis
2017-04-15	ConvergenceConcepts	Seeing Convergence Concepts in Action
2017-04-15	tseriesEntropy	Entropy Based Analysis and Tests for Time Series
2017-04-14	babynames	US Baby Names 1880-2015
2017-04-14	bayesCL	Bayesian Inference on a GPU using OpenCL
2017-04-14	nortestARMA	Neyman Smooth Tests of Normality for the Errors of ARMA Models
2017-04-14	RandomFieldsUtils	Utilities for the Simulation and Analysis of Random Fields
2017-04-14	Rtsne	T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
2017-04-14	scidb	An R Interface to SciDB
2017-04-14	SeerMapper2010East	Supplemental U. S. 2010 Census Tract Boundaries for 23 Eastern States without Registries for 'SeerMapper'
2017-04-14	SeerMapper2010West	Supplemental U.S. 2010 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-14	StatPerMeCo	Statistical Performance Measures to Evaluate Covariance Matrix Estimates
2017-04-14	thankr	Find Out Who Maintains the Packages you Use
2017-04-13	DAISIE	Dynamical Assembly of Islands by Speciation, Immigration and Extinction
2017-04-13	fitbitScraper	Scrapes Data from Fitbit
2017-04-13	fpest	Estimating Finite Population Total
2017-04-13	jug	A Simple Web Framework for R
2017-04-13	nopaco	Non-Parametric Concordance Coefficient
2017-04-13	R2ucare	Goodness-of-Fit Tests for Capture-Recapture Models
2017-04-13	rags2ridges	Ridge Estimation of Precision Matrices from High-Dimensional Data
2017-04-13	SeerMapper2010Regs	Supplemental U. S. 2010 Census Tract Boundaries for 15 States with Seer Registries for 'SeerMapper'
2017-04-13	spec	A Data Specification Format and Interface
2017-04-13	Tnseq	Identification of Conditionally Essential Genes in Transposon Sequencing Studies
2017-04-13	tubern	R Client for the YouTube Analytics and Reporting API
2017-04-13	wrangle	A Systematic Data Wrangling Idiom
2017-04-12	ANOM	Analysis of Means
2017-04-12	clarifai	Access to Clarifai API
2017-04-12	CompQuadForm	Distribution Function of Quadratic Forms in Normal Variables
2017-04-12	fullfact	Full Factorial Breeding Analysis
2017-04-12	marcher	Migration and Range Change Estimation in R
2017-04-12	optrcdmaeAT	Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments
2017-04-12	OSMscale	Add a Scale Bar to 'OpenStreetMap' Plots
2017-04-12	r.jive	Perform JIVE Decomposition for Multi-Source Data
2017-04-12	rbhl	Interface to the 'Biodiversity' 'Heritage' Library
2017-04-12	SeerMapperEast	Supplemental U. S. 2000 Census Tract Boundaries for 23 Eastern States without Seer Registries
2017-04-12	SeerMapperWest	Supplemental U.S. 2000 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-12	stddiff	Calculate the Standardized Difference for Numeric, Binary and Category Variables
2017-04-11	assertthat	Easy Pre and Post Assertions
2017-04-11	fastqcr	Quality Control of Sequencing Data
2017-04-11	GADAG	A Genetic Algorithm for Learning Directed Acyclic Graphs
2017-04-11	GLIDE	Global and Individual Tests for Direct Effects
2017-04-11	strataG	Summaries and Population Structure Analyses of Genetic Data
2017-04-11	VIM	Visualization and Imputation of Missing Values
2017-04-10	D3GB	Interactive Genome Browser with R
2017-04-10	lspline	Linear Splines with Convenient Parametrisations
2017-04-10	partools	Tools for the 'Parallel' Package
2017-04-10	SeerMapperRegs	Supplemental U. S. 2000 Census Tract Boundary for 15 States with Seer Registries for 'SeerMapper'
2017-04-10	tlm	Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
2017-04-09	Grace	Graph-Constrained Estimation and Hypothesis Tests
2017-04-09	mRchmadness	Numerical Tools for Filling Out an NCAA Basketball Tournament Bracket
2017-04-09	qdapRegex	Regular Expression Removal, Extraction, and Replacement Tools
2017-04-09	simpleRCache	Simple R Cache
2017-04-09	skeletor	An R Package Skeleton Generator
2017-04-09	tpAUC	Estimation and Inference of Two-Way pAUC, pAUC and pODC
2017-04-07	duckduckr	Simple Client for the DuckDuckGo Instant Answer API
2017-04-07	filehash	Simple Key-Value Database
2017-04-07	IMTest	Information Matrix Test for Generalized Partial Credit Models
2017-04-07	IRTShiny	Item Response Theory via Shiny
2017-04-07	lavaan.shiny	Latent Variable Analysis with Shiny
2017-04-07	MedDietCalc	Multi Calculator to Compute Scores of Adherence to Mediterranean Diet
2017-04-07	micEconIndex	Price and Quantity Indices
2017-04-07	psychomix	Psychometric Mixture Models
2017-04-07	rosm	Plot Raster Map Tiles from Open Street Map and Other Sources
2017-04-07	secure	Sequential Co-Sparse Factor Regression
2017-04-07	sylcount	Syllable Counting and Readability Measurements
2017-04-06	c212	Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
2017-04-06	cffdrs	Canadian Forest Fire Danger Rating System
2017-04-06	classifierplots	Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots
2017-04-06	CoFRA	Complete Functional Regulation Analysis
2017-04-06	eshrink	Shrinkage for Effect Estimation
2017-04-06	fit.models	Compare Fitted Models
2017-04-06	mmod	Modern Measures of Population Differentiation
2017-04-06	zfa	Zoom-Focus Algorithm
2017-04-05	bigstep	Stepwise Selection for Large Data Sets
2017-04-05	diversitree	Comparative 'Phylogenetic' Analyses of Diversification
2017-04-05	jetset	One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
2017-04-05	stablespec	Stable Specification Search in Structural Equation Models
2017-04-04	diveRsity	A Comprehensive, General Purpose Population Genetics Analysis Package
2017-04-04	HYRISK	Hybrid Methods for Addressing Uncertainty in RISK Assessments
2017-04-04	koRpus	An R Package for Text Analysis
2017-04-04	LassoBacktracking	Modelling Interactions in High-Dimensional Data with Backtracking
2017-04-04	sensitivityfull	Sensitivity Analysis for Full Matching in Observational Studies
2017-04-04	TSMN	Truncated Scale Mixtures of Normal Distributions
2017-04-04	weightr	Estimating Weight-Function Models for Publication Bias
2017-04-03	afmToolkit	Functions for Atomic Force Microscope Force-Distance Curves Analysis
2017-04-03	downsize	A Tool to Downsize Large Workflows for Testing
2017-04-03	FSInteract	Fast Searches for Interactions
2017-04-03	goftest	Classical Goodness-of-Fit Tests for Univariate Distributions
2017-04-03	groupsubsetselection	Group Subset Selection
2017-04-03	HMR	Flux Estimation with Static Chamber Data
2017-04-03	nlshelper	Convenient Functions for Non-Linear Regression
2017-04-03	RCEIM	R Cross Entropy Inspired Method for Optimization
2017-04-03	relMix	Relationship Inference for DNA Mixtures
2017-04-03	RPtests	Goodness of Fit Tests for High-Dimensional Linear Regression Models
2017-04-03	RsimMosaic	R Simple Image Mosaic Creation Library
2017-04-03	scuba	Diving Calculations and Decompression Models
2017-04-03	sizeMat	Estimate Size at Sexual Maturity
2017-04-03	UPMASK	Unsupervised Photometric Membership Assignment in Stellar Clusters
2017-04-03	vesselr	Gradient and Vesselness Tools for Arrays and NIfTI Images
2017-04-03	xbreed	Genomic Simulation of Purebred and Crossbred Populations
2017-04-03	xyz	The 'xyz' Algorithm for Fast Interaction Search in High-Dimensional Data
2017-04-02	enrichR	Provides an R Interface to 'Enrichr'
2017-04-02	medicare	Tools for Obtaining and Cleaning Medicare Public Use Files
2017-04-02	miscor	Miscellaneous Functions for the Correlation Coefficient
2017-04-02	RApiDatetime	R API Datetime
2017-04-01	corpcor	Efficient Estimation of Covariance and (Partial) Correlation
2017-04-01	grapes	Make Binary Operators
2017-04-01	hgm	Holonomic Gradient Method and Gradient Descent
2017-04-01	InterfaceqPCR	GUI to Analyse qPCR Results after PMA Treatment or not
2017-04-01	ncdf4	Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
2017-04-01	SARP.moodle	XML Output Functions for Easy Creation of Moodle Questions
2017-04-01	sss	Tools for Importing Files in the Triple-s (Standard Survey Structure) Format
2017-04-01	tensorr	Sparse Tensors in R
2017-04-01	tnam	Temporal Network Autocorrelation Models (TNAM)
2017-03-31	aptg	Automatic Phylogenetic Tree Generator
2017-03-31	cobs	Constrained B-Splines (Sparse Matrix Based)
2017-03-31	datautils	Timestamps and Advanced Plotting
2017-03-31	focusedMDS	Focused, Interactive Multidimensional Scaling
2017-03-31	gRim	Graphical Interaction Models
2017-03-31	kscons	A Bayesian Approach for Protein Residue Contact Prediction using the Knob-Socket Model of Protein Tertiary Structure
2017-03-31	lava.tobit	Latent Variable Models with Censored and Binary Outcomes
2017-03-31	NADA	Nondetects and Data Analysis for Environmental Data
2017-03-31	PCGSE	Principal Component Gene Set Enrichment
2017-03-31	RXKCD	Get XKCD Comic from R
2017-03-31	semiArtificial	Generator of Semi-Artificial Data
2017-03-31	xergm.common	Common Infrastructure for Extensions of Exponential Random Graph Models
2017-03-30	animation	A Gallery of Animations in Statistics and Utilities to Create Animations
2017-03-30	optim.functions	Standard Benchmark Optimization Functions
2017-03-30	smnet	Smoothing for Stream Network Data
2017-03-30	sodium	A Modern and Easy-to-Use Crypto Library
2017-03-30	webp	A New Format for Lossless and Lossy Image Compression
2017-03-29	AMCTestmakeR	Generate LaTeX Code for Auto-Multiple-Choice (AMC)
2017-03-29	BLModel	Black-Litterman Posterior Distribution
2017-03-29	care	High-Dimensional Regression and CAR Score Variable Selection
2017-03-29	expm	Matrix Exponential, Log, 'etc'
2017-03-29	fam2r	From 'Familias' to R
2017-03-29	metavcov	Variance-Covariance Matrix for Multivariate Meta-Analysis
2017-03-29	moezipfR	Marshall-Olkin Extended Zipf
2017-03-29	odeintr	C++ ODE Solvers Compiled on-Demand
2017-03-29	patternize	Quantification of Color Pattern Variation
2017-03-29	tilegramsR	R Spatial Data for Tilegrams
2017-03-29	tsqn	Applications of the Qn Estimator to Time Series (Univariate and Multivariate)
2017-03-28	itan	Item Analysis for Multiple Choice Tests
2017-03-28	mmeta	Multivariate Meta-Analysis
2017-03-28	sejmRP	An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office
2017-03-28	shinyHeatmaply	Deploy 'heatmaply' using 'shiny'
2017-03-28	XBRL	Extraction of Business Financial Information from 'XBRL' Documents
2017-03-27	dc3net	Inferring Condition-Specific Networks via Differential Network Inference
2017-03-27	flexsurv	Flexible Parametric Survival and Multi-State Models
2017-03-27	lulcc	Land Use Change Modelling in R
2017-03-27	mtconnectR	Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis
2017-03-27	pooh	Partial Orders and Relations
2017-03-27	qrcm	Quantile Regression Coefficients Modeling
2017-03-27	semPlot	Path Diagrams and Visual Analysis of Various SEM Packages' Output
2017-03-27	TSHRC	Two Stage Hazard Rate Comparison
2017-03-27	ump	Uniformly Most Powerful Tests
2017-03-26	aster2	Aster Models
2017-03-26	FamEvent	Family Age-at-Onset Data Simulation and Penetrance Estimation
2017-03-26	frair	Tools for Functional Response Analysis
2017-03-26	gems	Generalized Multistate Simulation Model
2017-03-26	MVLM	Multivariate Linear Model with Analytic p-Values
2017-03-26	NetworkRiskMeasures	Risk Measures for (Financial) Networks
2017-03-25	fftwtools	Wrapper for 'FFTW3' Includes: One-Dimensional Univariate, One-Dimensional Multivariate, and Two-Dimensional Transform
2017-03-25	lattice	Trellis Graphics for R
2017-03-25	slimrec	Sparse Linear Method to Predict Ratings and Top-N Recommendations
2017-03-25	TeachBayes	Teaching Bayesian Inference
2017-03-25	vortexRdata	Example Data for R Package 'vortexR'
2017-03-24	bkmr	Bayesian Kernel Machine Regression
2017-03-24	docstring	Provides Docstring Capabilities to R Functions
2017-03-24	fitdistrplus	Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2017-03-24	FuzzyR	Fuzzy Logic Toolkit for R
2017-03-24	IPWsurvival	Propensity Score Based Adjusted Survival Curves and Corresponding Log-Rank Statistic
2017-03-24	metagear	Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis
2017-03-24	PCFAM	Computation of Ancestry Scores with Mixed Families and Unrelated Individuals
2017-03-24	PortfolioEffectHFT	High Frequency Portfolio Analytics by PortfolioEffect
2017-03-24	rriskDistributions	Fitting Distributions to Given Data or Known Quantiles
2017-03-23	affluenceIndex	Affluence Indices
2017-03-23	aLFQ	Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
2017-03-23	diverse	Diversity Measures for Complex Systems
2017-03-23	lero.lero	Generate 'Lero Lero' Quotes
2017-03-23	simctest	Safe Implementation of Monte Carlo Tests
2017-03-23	summariser	Easy Calculation and Visualisation of Confidence Intervals
2017-03-23	tsxtreme	Bayesian Modelling of Extremal Dependence in Time Series
2017-03-22	benford.analysis	Benford Analysis for Data Validation and Forensic Analytics
2017-03-22	CVR	Canonical Variate Regression
2017-03-22	mMPA	Implementation of Marker-Assisted Mini-Pooling with Algorithm
2017-03-22	neuropsychology	Toolbox for Psychologists, Neuropsychologists and Neuroscientists
2017-03-22	pathmapping	Compute Deviation and Correspondence Between Spatial Paths
2017-03-22	vipor	Plot Categorical Data Using Quasirandom Noise and Density Estimates
2017-03-22	xlsimple	'XLConnect' Wrapper
2017-03-21	addhazard	Fit Additive Hazards Models for Survival Analysis
2017-03-21	averisk	Calculation of Average Population Attributable Fractions and Confidence Intervals
2017-03-21	BWStest	Baumgartner Weiss Schindler Test of Equal Distributions
2017-03-21	censReg	Censored Regression (Tobit) Models
2017-03-21	distory	Distance Between Phylogenetic Histories
2017-03-21	effsize	Efficient Effect Size Computation
2017-03-21	ega	Error Grid Analysis
2017-03-21	FMC	Factorial Experiments with Minimum Level Changes
2017-03-21	gbm	Generalized Boosted Regression Models
2017-03-21	gpg	GNU Privacy Guard for R
2017-03-21	interactionTest	Calculates Critical Test Statistics to Control False Discovery and Familywise Error Rates in Marginal Effects Plots
2017-03-21	orgutils	Helper Functions for Org Files
2017-03-21	photobiologyPlants	Plant Photobiology Related Functions and Data
2017-03-21	qrLMM	Quantile Regression for Linear Mixed-Effects Models
2017-03-21	qrNLMM	Quantile Regression for Nonlinear Mixed-Effects Models
2017-03-21	rnaturalearth	World Map Data from Natural Earth
2017-03-21	rolr	Finding Optimal Three-Group Splits Based on a Survival Outcome
2017-03-21	stmgp	Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data
2017-03-21	TauStar	Efficient Computation and Testing of the Bergsma-Dassios Sign Covariance
2017-03-21	UpSetR	A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
2017-03-20	disposables	Create Disposable R Packages for Testing
2017-03-20	EstimateGroupNetwork	Perform the Joint Graphical Lasso and Selects Tuning Parameters
2017-03-20	evclass	Evidential Distance-Based Classification
2017-03-20	ggsn	North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
2017-03-20	LW1949	An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)
2017-03-20	photobiologyWavebands	Waveband Definitions for UV, VIS, and IR Radiation
2017-03-20	refGenome	Gene and Splice Site Annotation Using Annotation Data from Ensembl and UCSC Genome Browsers
2017-03-20	Rvoterdistance	Calculates the Distance Between Voter and Multiple Polling Locations
2017-03-20	sadists	Some Additional Distributions
2017-03-20	sticky	Persist Attributes Across Data Operations
2017-03-20	TreeSim	Simulating Phylogenetic Trees
2017-03-19	fasteraster	Raster Image Processing and Vector Recognition
2017-03-19	hyfo	Hydrology and Climate Forecasting
2017-03-19	shinyShortcut	Creates an Executable Shortcut for Shiny Applications
2017-03-18	networkD3	D3 JavaScript Network Graphs from R
2017-03-18	OSCV	One-Sided Cross-Validation
2017-03-18	pcrsim	Simulation of the Forensic DNA Process
2017-03-18	PDQutils	PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations
2017-03-17	adhoc	Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification
2017-03-17	BASS	Bayesian Adaptive Spline Surfaces
2017-03-17	chemometrics	Multivariate Statistical Analysis in Chemometrics
2017-03-17	frontier	Stochastic Frontier Analysis
2017-03-17	textreg	n-Gram Text Regression, aka Concise Comparative Summarization
2017-03-16	BCSub	A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering)
2017-03-16	cir	Centered Isotonic Regression and Dose-Response Utilities
2017-03-16	CNull	Fast Algorithms for Frequency-Preserving Null Models in Ecology
2017-03-16	FlexDir	Tools to Work with the Flexible Dirichlet Distribution
2017-03-16	micEcon	Microeconomic Analysis and Modelling
2017-03-16	micEconAids	Demand Analysis with the Almost Ideal Demand System (AIDS)
2017-03-16	potts	Markov Chain Monte Carlo for Potts Models
2017-03-16	qqman	Q-Q and Manhattan Plots for GWAS Data
2017-03-16	RankingProject	The Ranking Project: Visualizations for Comparing Populations
2017-03-16	rolypoly	Identifying Trait-Relevant Functional Annotations
2017-03-15	dynaTree	Dynamic Trees for Learning and Design
2017-03-15	fuzzyRankTests	Fuzzy Rank Tests and Confidence Intervals
2017-03-15	gee4	Generalised Estimating Equations (GEE/WGEE) using 'Armadillo' and S4
2017-03-15	pbkrtest	Parametric Bootstrap and Kenward Roger Based Methods for Mixed Model Comparison
2017-03-15	redist	Markov Chain Monte Carlo Methods for Redistricting Simulation
2017-03-14	clusternomics	Integrative Clustering for Heterogeneous Biomedical Datasets
2017-03-14	copCAR	Fitting the copCAR Regression Model for Discrete Areal Data
2017-03-14	evoper	Evolutionary Parameter Estimation for 'Repast Simphony' Models
2017-03-14	FLightR	Hidden Markov Model for Solar Geolocation Archival Tags
2017-03-14	gatepoints	Easily Gate or Select Points on a Scatter Plot
2017-03-14	linbin	Binning and Plotting of Linearly Referenced Data
2017-03-14	outreg	Regression Table for Publication
2017-03-14	scalpel	Processes Calcium Imaging Data
2017-03-14	simboot	Simultaneous Inference for Diversity Indices
2017-03-14	StereoMorph	Stereo Camera Calibration and Reconstruction
2017-03-13	ABCanalysis	Computed ABC Analysis
2017-03-13	collpcm	Collapsed Latent Position Cluster Model for Social Networks
2017-03-13	gazepath	Parse Eye-Tracking Data into Fixations
2017-03-13	optCluster	Determine Optimal Clustering Algorithm and Number of Clusters
2017-03-13	ProfessR	Grades Setting and Exam Maker
2017-03-13	radmixture	Calculate Population Stratification
2017-03-13	revealjs	R Markdown Format for 'reveal.js' Presentations
2017-03-13	WhopGenome	High-Speed Processing of VCF, FASTA and Alignment Data
2017-03-12	bigFastlm	Fast Linear Models for Objects from the 'bigmemory' Package
2017-03-12	FastImputation	Learn from Training Data then Quickly Fill in Missing Data
2017-03-12	hydrogeo	Groundwater Data Presentation and Interpretation
2017-03-11	cmpprocess	Flexible Modeling of Count Processes
2017-03-11	iNextPD	Interpolation and Extrapolation for Phylogenetic Diversity
2017-03-11	kequate	The Kernel Method of Test Equating
2017-03-11	rdataretriever	R Interface to the Data Retriever
2017-03-11	stratification	Univariate Stratification of Survey Populations
2017-03-10	BBmisc	Miscellaneous Helper Functions for B. Bischl
2017-03-10	DREGAR	Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR)
2017-03-10	FSAdata	Data to Support Fish Stock Assessment ('FSA') Package
2017-03-10	HoRM	Supplemental Functions and Datasets for "Handbook of Regression Methods"
2017-03-10	LeafArea	Rapid Digital Image Analysis of Leaf Area
2017-03-10	mixtools	Tools for Analyzing Finite Mixture Models
2017-03-10	rinat	Access iNaturalist Data Through APIs
2017-03-10	SigOptR	R API Wrapper for SigOpt
2017-03-09	CONS	Consonance Analysis Module
2017-03-09	DAAGbio	Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
2017-03-09	emon	Tools for Environmental and Ecological Survey Design
2017-03-09	gnumeric	Read Data from Files Readable by 'gnumeric'
2017-03-09	iSDM	Invasive Species Distribution Modelling
2017-03-09	SymTS	Symmetric Tempered Stable Distributions
2017-03-09	taxonomizr	Functions to Work with NCBI Accessions and Taxonomy
2017-03-09	Ultimixt	Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior
2017-03-09	VertexSort	Network Hierarchical Structure and Randomization
2017-03-08	badger	Badge for R Package
2017-03-08	BCellMA	B Cell Receptor Somatic Hyper Mutation Analysis
2017-03-08	binomSamSize	Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling
2017-03-08	CatEncoders	Encoders for Categorical Variables
2017-03-08	MBA	Multilevel B-Spline Approximation
2017-03-08	NHLData	Scores for Every Season Since the Founding of the NHL in 1917
2017-03-08	nhlscrapr	Compiling the NHL Real Time Scoring System Database for easy use in R
2017-03-08	prop.comb.RR	Analyzing Combination of Proportions and Relative Risk
2017-03-08	readOffice	Read Text Out of Modern Office Files
2017-03-08	STMedianPolish	Spatio-Temporal Median Polish
2017-03-07	ALSM	Companion to Applied Linear Statistical Models
2017-03-07	cpr	Control Polygon Reduction
2017-03-07	fdaMixed	Functional Data Analysis in a Mixed Model Framework
2017-03-07	GDAtools	A Toolbox for the Analysis of Categorical Data in Social Sciences, and Especially Geometric Data Analysis
2017-03-07	otinference	Inference for Optimal Transport
2017-03-07	remindR	Insert and Extract "Reminders" from Function Comments
2017-03-07	rkt	Mann-Kendall Test, Seasonal and Regional Kendall Tests
2017-03-07	SpecsVerification	Forecast Verification Routines for Ensemble Forecasts of Weather and Climate
2017-03-06	BMAmevt	Multivariate Extremes: Bayesian Estimation of the Spectral Measure
2017-03-06	DySeq	Functions for Dyadic Sequence Analyses
2017-03-06	edarf	Exploratory Data Analysis using Random Forests
2017-03-06	funchir	Convenience Functions by Michael Chirico
2017-03-06	gt4ireval	Generalizability Theory for Information Retrieval Evaluation
2017-03-06	mc2d	Tools for Two-Dimensional Monte-Carlo Simulations
2017-03-06	MLID	Multilevel Index of Dissimilarity
2017-03-06	twilio	An Interface to the Twilio API for R
2017-03-05	VarED	Variance Estimation using Difference-Based Methods
2017-03-04	CPsurv	Nonparametric Change Point Estimation for Survival Data
2017-03-04	icarus	Calibrates and Reweights Units in Samples
2017-03-04	maGUI	A Graphical User Interface for Microarray Data Analysis and Annotation
2017-03-04	SubgrpID	Patient Subgroup Identification for Clinical Drug Development
2017-03-03	CensSpatial	Censored Spatial Models
2017-03-03	cghRA	Array CGH Data Analysis and Visualization
2017-03-03	Demerelate	Functions to Calculate Relatedness on Diploid Genetic Data
2017-03-03	Dpit	Distribution Pitting
2017-03-03	MDPtoolbox	Markov Decision Processes Toolbox
2017-03-03	texreg	Conversion of R Regression Output to LaTeX or HTML Tables
2017-03-02	BNPdensity	Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures
2017-03-02	cropdatape	Open Data of Agricultural Production of Crops of Peru
2017-03-02	DiversityOccupancy	Building Diversity Models from Multiple Species Occupancy Models
2017-03-02	erp.easy	Event-Related Potential (ERP) Data Exploration Made Easy
2017-03-02	fitplc	Fit Hydraulic Vulnerability Curves
2017-03-02	gaiah	Genetic and Isotopic Assignment Accounting for Habitat Suitability
2017-03-02	isa2	The Iterative Signature Algorithm
2017-03-02	keypress	Wait for a Key Press in a Terminal
2017-03-02	maxstat	Maximally Selected Rank Statistics
2017-03-02	msgtools	Tools for Developing Diagnostic Messages
2017-03-02	parsedate	Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats
2017-03-02	pingr	Check if a Remote Computer is Up
2017-03-02	sand	Statistical Analysis of Network Data with R
2017-03-02	swirl	Learn R, in R
2017-03-02	WPKDE	Weighted Piecewise Kernel Density Estimation
2017-03-01	dotenv	Load Environment Variables from '.env'
2017-03-01	exactRankTests	Exact Distributions for Rank and Permutation Tests
2017-03-01	plspolychaos	Sensitivity Indexes from Polynomial Chaos Expansions and PLS
2017-03-01	polychaosbasics	Sensitivity Indexes Calculated from Polynomial Chaos Expansions
2017-03-01	pssm	Piecewise Exponential Model for Time to Progression and Time from Progression to Death
2017-03-01	R4CouchDB	A R Convenience Layer for CouchDB 2.0
2017-02-28	DiffNet	Detection of Statistically Significant Changes in Complex Biological Networks
2017-02-28	GLDreg	Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
2017-02-28	operator.tools	Utilities for Working with R's Operators
2017-02-28	rcc	Parametric Bootstrapping to Control Rank Conditional Coverage
2017-02-28	ResourceSelection	Resource Selection (Probability) Functions for Use-Availability Data
2017-02-28	RPMM	Recursively Partitioned Mixture Model
2017-02-27	apa	Format Outputs of Statistical Tests According to APA Guidelines
2017-02-27	bgmm	Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling
2017-02-27	bootstrap	Functions for the Book "An Introduction to the Bootstrap"
2017-02-27	CAvariants	Correspondence Analysis Variants
2017-02-27	diffr	Display Differences Between Two Files using Codediff Library
2017-02-27	dirmcmc	Directional Metropolis Hastings Algorithm
2017-02-27	extdplyr	Data Manipulation Extensions of 'Dplyr' and 'Tidyr'
2017-02-27	fontHind	Additional 'ggplot2' Themes Using 'Hind' Fonts
2017-02-27	fontMPlus	Additional 'ggplot2' Themes Using 'M+' Fonts
2017-02-27	gbts	Hyperparameter Search for Gradient Boosted Trees
2017-02-27	leafletCN	An R Gallery for China and Other Geojson Choropleth Map in Leaflet
2017-02-27	misreport	Statistical Analysis of Misreporting on Sensitive Survey Questions
2017-02-27	qap	Heuristics for the Quadratic Assignment Problem (QAP)
2017-02-26	automagic	Automagically Document and Install Packages Necessary to Run R Code
2017-02-26	AWR.Kinesis	Amazon 'Kinesis' Consumer Application for Stream Processing
2017-02-26	IDPSurvival	Imprecise Dirichlet Process for Survival Analysis
2017-02-25	betacal	Beta Calibration
2017-02-25	recexcavAAR	3D Reconstruction of Archaeological Excavations
2017-02-25	RefFreeEWAS	EWAS using Reference-Free DNA Methylation Mixture Deconvolution
2017-02-24	BayesS5	Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
2017-02-24	ccafs	Client for 'CCAFS' 'GCM' Data
2017-02-24	europop	Historical Populations of European Cities, 1500-1800
2017-02-24	falconx	Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data
2017-02-24	hasseDiagram	Drawing Hasse Diagram
2017-02-24	miscset	Miscellaneous Tools Set
2017-02-24	som.nn	Topological k-NN Classifier Based on Self-Organising Maps
2017-02-24	TAR	Bayesian Modeling of Autoregressive Threshold Time Series Models
2017-02-24	walkr	Random Walks in the Intersection of Hyperplanes and the N-Simplex
2017-02-23	EnviroPRA	Environmental Probabilistic Risk Assessment Tools
2017-02-23	gower	Gower's Distance
2017-02-23	GsymPoint	Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
2017-02-23	InvasionCorrection	Invasion Correction
2017-02-23	naptime	A Flexible and Robust Sys.sleep() Replacement
2017-02-23	neighbr	Classification, Regression, Clustering with K Nearest Neighbors
2017-02-23	prefeR	R Package for Pairwise Preference Elicitation
2017-02-23	robustarima	Robust ARIMA Modeling
2017-02-22	BayesSpec	Bayesian Spectral Analysis Techniques
2017-02-22	BCC1997	Calculation of Option Prices Based on a Universal Solution
2017-02-22	bsearchtools	Binary Search Tools
2017-02-22	choroplethrAdmin1	Contains an Administrative-Level-1 Map of the World
2017-02-22	DecorateR	Fit and Deploy DECORATE Trees
2017-02-22	idendr0	Interactive Dendrograms
2017-02-22	Mangrove	Risk Prediction on Trees
2017-02-22	R2OpenBUGS	Running OpenBUGS from R
2017-02-22	RWiener	Wiener Process Distribution Functions
2017-02-21	lclGWAS	Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data
2017-02-21	mle.tools	Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s)
2017-02-21	rnaturalearthdata	World Vector Map Data from Natural Earth Used in 'rnaturalearth'
2017-02-21	stdvectors	C++ Standard Library Vectors in R
2017-02-20	AWR.KMS	A Simple Client to the 'AWS' Key Management Service
2017-02-20	BayesFM	Bayesian Inference for Factor Modeling
2017-02-20	CEoptim	Cross-Entropy R Package for Optimization
2017-02-20	colorr	Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
2017-02-20	fileplyr	Chunk Processing or Split-Apply-Combine on Delimited Files and Distributed Dataframes
2017-02-20	genemodel	Gene Model Plotting in R
2017-02-20	gMOIP	'2D plots of linear or integer programming models'
2017-02-20	GSparO	Group Sparse Optimization
2017-02-20	OxyBS	Processing of Oxy-Bisulfite Microarray Data
2017-02-20	pawacc	Physical Activity with Accelerometers
2017-02-20	survRM2	Comparing Restricted Mean Survival Time
2017-02-20	textcat	N-Gram Based Text Categorization
2017-02-20	W3CMarkupValidator	R Interface to W3C Markup Validation Services
2017-02-19	eAnalytics	Dynamic Web-Based Analytics for the Energy Industry
2017-02-19	ROCt	Time-Dependent ROC Curve Estimators and Expected Utility Functions
2017-02-19	upmfit	Unified Probability Model Fitting
2017-02-18	AMCP	A Model Comparison Perspective
2017-02-18	GHap	Genome-Wide Haplotyping
2017-02-18	helsinki	R Tools for Helsinki Open Data
2017-02-18	mixtox	Curve Fitting and Mixture Toxicity Assessment
2017-02-18	yorkr	Analyze Cricket Performances Based on Data from Cricsheet
2017-02-17	BDWreg	Bayesian Inference for Discrete Weibull Regression
2017-02-17	educineq	Compute and Decompose Inequality in Education
2017-02-17	EMMLi	A Maximum Likelihood Approach to the Analysis of Modularity
2017-02-17	gglogo	Geom for Logo Sequence Plots
2017-02-17	keyringr	Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain
2017-02-17	marinespeed	Benchmark Data Sets and Functions for Marine Species Distribution Modelling
2017-02-17	pca3d	Three Dimensional PCA Plots
2017-02-17	riverplot	Sankey or Ribbon Plots
2017-02-17	RPushbullet	R Interface to the Pushbullet Messaging Service
2017-02-16	hqreg	Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression
2017-02-16	mdscore	Improved Score Tests for Generalized Linear Models
2017-02-16	opusminer	OPUS Miner Algorithm for Filtered Top-k Association Discovery
2017-02-16	papeR	A Toolbox for Writing Pretty Papers and Reports
2017-02-16	ridigbio	Interface to the iDigBio Data API
2017-02-16	rope	Model Selection with FDR Control of Selected Variables
2017-02-16	spdownscale	Spatial Downscaling Using Bias Correction Approach
2017-02-16	ubeR	Interface to the Uber API
2017-02-15	condir	Computation of P Values and Bayes Factors for Conditioning Data
2017-02-15	ggalt	Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'
2017-02-15	pathological	Path Manipulation Utilities
2017-02-15	velociraptr	Fossil Analysis
2017-02-15	warpMix	Mixed Effects Modeling with Warping for Functional Data Using B-Spline
2017-02-14	decoder	Decode Coded Variables to Plain Text and the Other Way Around
2017-02-14	dgodata	Data for the 'dgo' Package
2017-02-14	eefAnalytics	Analysing Education Trials
2017-02-14	emIRT	EM Algorithms for Estimating Item Response Theory Models
2017-02-14	MIAmaxent	Maxent Distribution Model Selection
2017-02-14	paperplanes	Distance Recordings from a Paper Plane Folding/Flying Experiment
2017-02-14	rapiclient	Dynamic OpenAPI/Swagger Client
2017-02-14	rdnb	R Interface to the 'Deutsche Nationalbibliothek (German National Library) API'
2017-02-14	schoRsch	Tools for Analyzing Factorial Experiments
2017-02-13	cope	Coverage Probability Excursion (CoPE) Sets
2017-02-13	ecosim	Toolbox for Aquatic Ecosystem Modeling
2017-02-13	LiblineaR	Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library
2017-02-13	PivotalR	A Fast, Easy-to-Use Tool for Manipulating Tables in Databases and a Wrapper of MADlib
2017-02-13	s2dverification	Set of Common Tools for Forecast Verification
2017-02-12	dynBiplotGUI	Full Interactive GUI for Dynamic Biplot in R
2017-02-12	fma	Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998)
2017-02-12	HRQoL	Health Related Quality of Life Analysis
2017-02-12	imputeMulti	Imputation Methods for Multivariate Multinomial Data
2017-02-12	purge	Purge Training Data from Models
2017-02-11	AF	Model-Based Estimation of Confounder-Adjusted Attributable Fractions
2017-02-11	DNAtools	Tools for Analysing Forensic Genetic DNA Data
2017-02-11	maxnet	Fitting 'Maxent' Species Distribution Models with 'glmnet'
2017-02-11	RGENERATE	Tools to Generate Vector Time Series
2017-02-11	RGENERATEPREC	Tools to Generate Daily-Precipitation Time Series
2017-02-11	RMAWGEN	Multi-Site Auto-Regressive Weather GENerator
2017-02-11	StVAR	Student's t Vector Autoregression (StVAR)
2017-02-09	ggmosaic	Mosaic Plots in the 'ggplot2' Framework
2017-02-09	optbdmaeAT	Optimal Block Designs for Two-Colour cDNA Microarray Experiments
2017-02-09	RHRV	Heart Rate Variability Analysis of ECG Data
2017-02-09	seqMeta	Meta-Analysis of Region-Based Tests of Rare DNA Variants
2017-02-08	BayesCombo	Bayesian Evidence Combination
2017-02-08	FuzzyStatTra	Statistical Methods for Trapezoidal Fuzzy Numbers
2017-02-08	nse	Numerical Standard Errors Computation in R
2017-02-08	OCA	Optimal Capital Allocations
2017-02-07	arabicStemR	Arabic Stemmer for Text Analysis
2017-02-07	GPB	Generalized Poisson Binomial Distribution
2017-02-07	pMineR	Processes Mining in Medicine
2017-02-06	Binarize	Binarization of One-Dimensional Data
2017-02-06	BiTrinA	Binarization and Trinarization of One-Dimensional Data
2017-02-06	cbird	Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization
2017-02-06	CompareTests	Correct for Verification Bias in Diagnostic Accuracy & Agreement
2017-02-06	gnlm	Generalized Nonlinear Regression Models
2017-02-06	growth	Multivariate Normal and Elliptically-Contoured Repeated Measurements Models
2017-02-06	mdftracks	Read and Write 'MTrackJ Data Files'
2017-02-06	ontologyIndex	Functions for Reading Ontologies into R
2017-02-06	QuantileGradeR	Quantile-Adjusted Restaurant Grading
2017-02-06	repeated	Non-Normal Repeated Measurements Models
2017-02-06	samplingDataCRT	Sampling Data Within Different Study Designs for Cluster Randomized Trials
2017-02-06	SMLoutliers	Outlier Detection Using Statistical and Machine Learning Methods
2017-02-06	supportInt	Calculates Likelihood Support Intervals for Common Data Types
2017-02-06	treebase	Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
2017-02-05	AdMit	Adaptive Mixture of Student-t Distributions
2017-02-05	mbrglm	Median Bias Reduction in Binomial-Response GLMs
2017-02-05	random	True Random Numbers using RANDOM.ORG
2017-02-05	RiskPortfolios	Computation of Risk-Based Portfolios
2017-02-05	WikipediR	A MediaWiki API Wrapper
2017-02-04	bayesGARCH	Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
2017-02-04	flippant	Dithionite Scramblase Assay Analysis
2017-02-04	PeerPerformance	Luck-Corrected Peer Performance Analysis in R
2017-02-04	samplesizelogisticcasecontrol	Sample Size Calculations for Case-Control Studies
2017-02-04	superheat	A Graphical Tool for Exploring Complex Datasets Using Heatmaps
2017-02-04	tolerance	Statistical Tolerance Intervals and Regions
2017-02-03	BAMMtools	Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
2017-02-03	PST	Probabilistic Suffix Trees and Variable Length Markov Chains
2017-02-02	evolqg	Tools for Evolutionary Quantitative Genetics
2017-02-02	moveWindSpeed	Estimate Wind Speeds from Bird Trajectories
2017-02-02	mpe	Multiple Primary Endpoints
2017-02-02	powerAnalysis	Power Analysis in Experimental Design
2017-02-02	readHAC	Read Acoustic HAC Format
2017-02-02	robustX	'eXtra' / 'eXperimental' Functionality for Robust Statistics
2017-02-02	SignifReg	Significant Variable Selection in Linear Regression
2017-02-01	demoKde	Kernel Density Estimation for Demonstration Purposes
2017-02-01	EnsCat	Clustering of Categorical Data
2017-02-01	fontBitstreamVera	Fonts with 'Bitstream Vera Fonts' License
2017-02-01	fontquiver	Set of Installed Fonts
2017-02-01	lcopula	Liouville Copulas
2017-02-01	pdR	Threshold Model and Unit Root Tests in Panel Data
2017-02-01	PopGenReport	A Simple Framework to Analyse Population and Landscape Genetic Data
2017-02-01	ShinyTester	Functions to Minimize Bonehead Moves While Working with 'shiny'
2017-02-01	sonify	Data Sonification - Turning Data into Sound
2017-02-01	ssmsn	Scale-Shape Mixtures of Skew-Normal Distributions
2017-01-31	blendedLink	A New Link Function that Blends Two Specified Link Functions
2017-01-31	choroplethrMaps	Contains Maps Used by the 'choroplethr' Package
2017-01-31	cplexAPI	R Interface to C API of IBM ILOG CPLEX
2017-01-31	edstan	Stan Models for Item Response Theory
2017-01-31	iBST	Improper Bagging Survival Tree
2017-01-31	subcopem2D	Bivariate Empirical Subcopula
2017-01-30	bunchr	Analyze Bunching in a Kink or Notch Setting
2017-01-30	flood	Statistical Methods for the (Regional) Analysis of Flood Frequency
2017-01-30	gesis	R Client for GESIS Data Catalogue (DBK)
2017-01-30	gunsales	Statistical Analysis of Monthly Background Checks of Gun Purchases
2017-01-30	inspectr	Perform Basic Checks of Dataframes
2017-01-29	observer	Observe and Check your Data
2017-01-29	poio	Input/Output Functionality for "PO" and "POT" Message Translation Files
2017-01-29	TTCA	Transcript Time Course Analysis
2017-01-29	uroot	Unit Root Tests for Seasonal Time Series
2017-01-28	alphabetr	Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells
2017-01-28	fastmatch	Fast match() function
2017-01-28	gbp	A Bin Packing Problem Solver
2017-01-28	hurricaneexposure	Explore and Map County-Level Hurricane Exposure in the United States
2017-01-28	iosmooth	Functions for Smoothing with Infinite Order Flat-Top Kernels
2017-01-28	tracer	Slick Call Stacks
2017-01-27	bayesQR	Bayesian Quantile Regression
2017-01-27	cooccurNet	Co-Occurrence Network
2017-01-27	EffectTreat	Prediction of Therapeutic Success
2017-01-27	landsat8	Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature
2017-01-27	LumReader	TL/OSL Reader Simulator
2017-01-27	mixpack	Tools to Work with Mixture Components
2017-01-27	sparsestep	SparseStep Regression
2017-01-26	BayesPieceHazSelect	Variable Selection in a Hierarchical Bayesian Model for a Hazard Function
2017-01-26	BiSEp	Toolkit to Identify Candidate Synthetic Lethality
2017-01-26	eclust	Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data
2017-01-26	nparsurv	Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data
2017-01-26	Rcereal	C++11 Header Files for 'cereal'
2017-01-25	goeveg	Functions for Community Data and Ordinations
2017-01-25	permutations	Permutations of a Finite Set
2017-01-24	givitiR	The GiViTI Calibration Test and Belt
2017-01-24	mutSignatures	Decipher Mutational Signatures from Somatic Mutational Catalogs
2017-01-24	NORMA	Builds General Noise SVRs
2017-01-24	powerEQTL	Power and Sample Size Calculation for eQTL Analysis
2017-01-24	rKIN	(Kernel) Isotope Niche Estimation
2017-01-24	simpleSetup	Set Up R Source Code Files for Use on Multiple Machines
2017-01-23	chi2x3way	Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables
2017-01-23	errint	Builds Error Intervals
2017-01-23	mads	Multi-Analysis Distance Sampling
2017-01-23	MTurkR	R Client for the MTurk Requester API
2017-01-23	RNCEP	Obtain, Organize, and Visualize NCEP Weather Data
2017-01-23	skm	Selective k-Means
2017-01-22	ALDqr	Quantile Regression Using Asymmetric Laplace Distribution
2017-01-22	ICV	Indirect Cross-Validation (ICV) for Kernel Density Estimation
2017-01-22	intrval	Relational Operators for Intervals
2017-01-22	kpcalg	Kernel PC Algorithm for Causal Structure Detection
2017-01-22	maxlike	Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data
2017-01-22	mglR	Master Gene List
2017-01-22	SOFIA	Making Sophisticated and Aesthetical Figures in R
2017-01-22	tea	Threshold Estimation Approaches
2017-01-22	teda	An Implementation of the Typicality and Eccentricity Data Analysis Framework
2017-01-21	chords	Estimation in Respondent Driven Samples
2017-01-21	rcure	Robust Cure Models for Survival Analysis
2017-01-20	testforDEP	Dependence Tests for Two Variables
2017-01-19	bytescircle	Statistics About Bytes Contained in a File as a Circle Plot
2017-01-19	deTestSet	Test Set for Differential Equations
2017-01-19	rUnemploymentData	Data and Functions for USA State and County Unemployment Data
2017-01-18	caesar	Encrypts and Decrypts Strings
2017-01-18	cleanr	Helps You to Code Cleaner
2017-01-18	conditions	Standardized Conditions for R
2017-01-18	isdparser	Parse 'NOAA' Integrated Surface Data Files
2017-01-18	MADPop	MHC Allele-Based Differencing Between Populations
2017-01-18	rgho	Access WHO Global Health Observatory Data from R
2017-01-18	shotGroups	Analyze Shot Group Data
2017-01-17	bayesianETAS	Bayesian Estimation of the ETAS Model for Earthquake Occurrences
2017-01-17	cclust	Convex Clustering Methods and Clustering Indexes
2017-01-17	highcharter	A Wrapper for the 'Highcharts' Library
2017-01-17	mangoTraining	Mango Solutions Training Datasets
2017-01-17	microclass	Methods for Taxonomic Classification of Prokaryotes
2017-01-17	rCAT	Conservation Assessment Tools
2017-01-17	rorutadis	Robust Ordinal Regression UTADIS
2017-01-17	tabplot	Tableplot, a Visualization of Large Datasets
2017-01-16	cumstats	Cumulative Descriptive Statistics
2017-01-16	matconv	A Code Converter from the Matlab/Octave Language to R
2017-01-16	peakRAM	Monitor the Total and Peak RAM Used by an Expression or Function
2017-01-15	maxmatching	Maximum Matching for General Weighted Graph
2017-01-15	mhsmm	Inference for Hidden Markov and Semi-Markov Models
2017-01-15	PoSI	Valid Post-Selection Inference for Linear LS Regression
2017-01-14	dfphase1	Phase I Control Charts (with Emphasis on Distribution-Free Methods)
2017-01-14	InfiniumPurify	Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis
2017-01-14	isva	Independent Surrogate Variable Analysis
2017-01-14	marima	Multivariate ARIMA and ARIMA-X Analysis
2017-01-14	owmr	OpenWeatherMap API Wrapper
2017-01-14	PhyloMeasures	Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
2017-01-14	rwars	R Client for the Star Wars API
2017-01-13	GeneClusterNet	Gene Expression Clustering and Gene Network
2017-01-13	GMCM	Fast Estimation of Gaussian Mixture Copula Models
2017-01-13	GORCure	Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data
2017-01-13	ICGOR	Fit Generalized Odds Rate Hazards Model with Interval Censored Data
2017-01-13	IsoSpecR	The IsoSpec Algorithm
2017-01-13	SADEG	Stability Analysis in Differentially Expressed Genes
2017-01-13	sparkwarc	Load WARC Files into Apache Spark
2017-01-13	TRADER	Tree Ring Analysis of Disturbance Events in R
2017-01-12	boxr	Interface for the 'Box.com API'
2017-01-12	EBrank	Empirical Bayes Ranking
2017-01-12	pxR	PC-Axis with R
2017-01-12	RChronoModel	Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal
2017-01-12	rld	Analyze and Design Repeated Low-Dose Challenge Experiments
2017-01-12	zTree	Functions to Import Data from 'z-Tree' into R
2017-01-11	esmisc	Misc Functions of Eduard Szöcs
2017-01-11	NetWeaver	Graphic Presentation of Complex Genomic and Network Data Analysis
2017-01-11	ptstem	Stemming Algorithms for the Portuguese Language
2017-01-11	QRank	A Novel Quantile Regression Approach for eQTL Discovery
2017-01-11	RND	Risk Neutral Density Extraction Package
2017-01-10	icesDatras	DATRAS Trawl Database Web Services
2017-01-10	leaps	Regression Subset Selection
2017-01-10	qfasar	Quantitative Fatty Acid Signature Analysis in R
2017-01-10	regclass	Tools for an Introductory Class in Regression and Modeling
2017-01-10	SAVE	Bayesian Emulation, Calibration and Validation of Computer Models
2017-01-10	USGSstates2k	Replaced by 'states2k' – United States of America Map with the NAD 1983 Albers Projection
2017-01-10	VGAMdata	Data Supporting the 'VGAM' Package
2017-01-09	BoolFilter	Optimal Estimation of Partially Observed Boolean Dynamical Systems
2017-01-09	dismo	Species Distribution Modeling
2017-01-09	esaddle	Extended Empirical Saddlepoint Density Approximation
2017-01-09	npmv	Nonparametric Comparison of Multivariate Samples
2017-01-09	rjsonapi	Consumer for APIs that Follow the JSON API Specification
2017-01-09	speedglm	Fitting Linear and Generalized Linear Models to Large Data Sets
2017-01-09	ssizeRNA	Sample Size Calculation for RNA-Seq Experimental Design
2017-01-09	StatMatch	Statistical Matching
2017-01-09	stormwindmodel	Model Tropical Cyclone Wind Speeds
2017-01-08	lowmemtkmeans	Low Memory Use Trimmed K-Means
2017-01-08	monomvn	Estimation for Multivariate Normal and Student-t Data with Monotone Missingness
2017-01-07	AER	Applied Econometrics with R
2017-01-07	caseMatch	Identify Similar Cases for Qualitative Case Studies
2017-01-07	depth	Nonparametric Depth Functions for Multivariate Analysis
2017-01-07	MAMSE	Calculation of Minimum Averaged Mean Squared Error (MAMSE) Weights
2017-01-07	panelaggregation	Aggregate Longitudinal Survey Data
2017-01-07	sysid	System Identification in R
2017-01-07	waffle	Create Waffle Chart Visualizations in R
2017-01-06	biogram	N-Gram Analysis of Biological Sequences
2017-01-06	BivRegBLS	Tolerance Intervals and Errors-in-Variables Regressions in Method Comparison Studies
2017-01-06	DFIT	Differential Functioning of Items and Tests
2017-01-06	eHOF	Extended HOF (Huisman-Olff-Fresco) Models
2017-01-06	fabCI	FAB Confidence Intervals
2017-01-06	ltxsparklines	Lightweight Sparklines for a LaTeX Document
2017-01-06	pamctdp	Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns
2017-01-06	Plasmidprofiler	Visualization of Plasmid Profile Results
2017-01-06	semver	'Semantic Versioning V2.0.0' Parser
2017-01-05	crisp	Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way
2017-01-05	etasFLP	Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
2017-01-05	FixSeqMTP	Fixed Sequence Multiple Testing Procedures
2017-01-05	gsl	Wrapper for the Gnu Scientific Library
2017-01-05	hail	Read HYDRA Rainfall Data
2017-01-05	lfda	Local Fisher Discriminant Analysis
2017-01-05	lmfor	Functions for Forest Biometrics
2017-01-05	MRCE	Multivariate Regression with Covariance Estimation
2017-01-05	partDSA	Partitioning Using Deletion, Substitution, and Addition Moves
2017-01-05	requireR	R Source Code Modularizer
2017-01-05	RWinEdt	R Interface to 'WinEdt'
2017-01-05	TBSSurvival	Survival Analysis using a Transform-Both-Sides Model
2017-01-04	BayesPiecewiseICAR	Hierarchical Bayesian Model for a Hazard Function
2017-01-04	dSVA	Direct Surrogate Variable Analysis
2017-01-04	HeritSeq	Heritability of Gene Expression for Next-Generation Sequencing
2017-01-04	minimalRSD	Minimally Changed CCD and BBD
2017-01-04	Partiallyoverlapping	Partially Overlapping Samples t-Tests
2017-01-04	pwt8	Penn World Table (Version 8.x)
2017-01-04	pwt9	Penn World Table (Version 9.x)
2017-01-04	Redmonder	Microsoft(r)-Inspired Color Palettes
2017-01-04	SimPhe	Tools to Simulate Phenotype(s) with Epistatic Interaction
2017-01-04	treemap	Treemap Visualization
2017-01-04	tsdecomp	Decomposition of Time Series Data
2017-01-04	TSeriesMMA	Multiscale Multifractal Analysis of Time Series Data
2017-01-03	colr	Functions to Select and Rename Data
2017-01-03	FTRLProximal	FTRL Proximal Implementation for Elastic Net Regression
2017-01-03	natserv	'NatureServe' Interface
2017-01-03	NCmisc	Miscellaneous Functions for Creating Adaptive Functions and Scripts
2017-01-03	openadds	Client to Access 'Openaddresses' Data
2017-01-03	QCAtools	Helper Functions for QCA in R
2017-01-03	reader	Suite of Functions to Flexibly Read Data from Files
2017-01-03	rebus.unicode	Unicode Extensions for the 'rebus' Package
2017-01-03	rneos	XML-RPC Interface to NEOS
2017-01-01	abundant	High-Dimensional Principal Fitted Components and Abundant Regression
2017-01-01	awsjavasdk	Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK
2017-01-01	googleVis	R Interface to Google Charts
2016-12-31	assertive	Readable Check Functions to Ensure Code Integrity
2016-12-31	censys	Tools to Query the 'Censys' API
2016-12-31	factorstochvol	Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models
2016-12-31	futureheatwaves	Find, Characterize, and Explore Extreme Events in Climate Projections
2016-12-31	grpregOverlap	Penalized Regression Models with Overlapping Grouped Covariates
2016-12-31	hds	Hazard Discrimination Summary
2016-12-31	likert	Analysis and Visualization Likert Items
2016-12-31	sdprisk	Measures of Risk for the Compound Poisson Risk Process with Diffusion
2016-12-30	assertive.base	A Lightweight Core of the 'assertive' Package
2016-12-30	assertive.properties	Assertions to Check Properties of Variables
2016-12-30	assertive.reflection	Assertions for Checking the State of R
2016-12-30	assertive.sets	Assertions to Check Properties of Sets
2016-12-30	assertive.types	Assertions to Check Types of Variables
2016-12-30	bootruin	A Bootstrap Test for the Probability of Ruin in the Classical Risk Process
2016-12-30	bossMaps	Convert Binary Species Range Maps into Continuous Surfaces Based on Distance to Range Edge
2016-12-30	finiteruinprob	Computation of the Probability of Ruin Within a Finite Time Horizon
2016-12-30	GCPM	Generalized Credit Portfolio Model
2016-12-30	GSE	Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
2016-12-30	gsheet	Download Google Sheets Using Just the URL
2016-12-30	HDtest	High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series
2016-12-30	list	Statistical Methods for the Item Count Technique and List Experiment
2016-12-30	RcppMLPACK	'Rcpp' Integration for the 'MLPACK' Library
2016-12-30	uniah	Unimodal Additive Hazards Model
2016-12-29	AcceptanceSampling	Creation and Evaluation of Acceptance Sampling Plans
2016-12-29	fortunes	R Fortunes
2016-12-29	htmltab	Assemble Data Frames from HTML Tables
2016-12-28	attrCUSUM	Tools for Attribute VSI CUSUM Control Chart
2016-12-28	confreq	Configural Frequencies Analysis Using Log-Linear Modeling
2016-12-28	nplr	N-Parameter Logistic Regression
2016-12-27	acrt	Autocorrelation Robust Testing
2016-12-27	bayesloglin	Bayesian Analysis of Contingency Table Data
2016-12-27	Bclim	Bayesian Palaeoclimate Reconstruction from Pollen Data
2016-12-27	DStree	Recursive Partitioning for Discrete-Time Survival Trees
2016-12-27	IRTpp	Estimating IRT Parameters using the IRT Methodology
2016-12-27	KTensorGraphs	Co-Tucker3 Analysis of Two Sequences of Matrices
2016-12-27	mRm	An R Package for Conditional Maximum Likelihood Estimation in Mixed Rasch Models
2016-12-27	restrictedMVN	Multivariate Normal Restricted by Affine Constraints
2016-12-27	rFTRLProximal	FTRL-Proximal Algorithm
2016-12-27	rpubchem	An Interface to the PubChem Collection
2016-12-27	SCBmeanfd	Simultaneous Confidence Bands for the Mean of Functional Data
2016-12-27	spark.sas7bdat	Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark'
2016-12-27	UStatBookABSC	A Companion Package to the Book "U-Statistics, M-Estimation and Resampling"
2016-12-26	DISTRIB	Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach
2016-12-26	factorcpt	Simultaneous Change-Point and Factor Analysis
2016-12-26	GLDEX	Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
2016-12-26	tilting	Variable Selection via Tilted Correlation Screening Algorithm
2016-12-26	utf8latex	Importing, Exporting and Converting Between Datasets and LaTeX
2016-12-24	findviews	A View Generator for Multidimensional Data
2016-12-24	ggguitar	Utilities for Creating Guitar Tablature
2016-12-24	samplesize	Sample Size Calculation for Various t-Tests and Wilcoxon-Test
2016-12-23	gemtc	Network Meta-Analysis Using Bayesian Methods
2016-12-23	Rarity	Calculation of Rarity Indices for Species and Assemblages of Species
2016-12-23	ROI.models.netlib	'ROI' Optimization Problems Based on 'NETLIB-LP'
2016-12-23	ztype	Run a Ztype Game Loaded with R Functions
2016-12-22	concreg	Concordance Regression
2016-12-22	heritability	Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
2016-12-22	lavaan.survey	Complex Survey Structural Equation Modeling (SEM)
2016-12-22	readJDX	Import Data in the JCAMP-DX Format
2016-12-22	rowr	Row-Based Functions for R Objects
2016-12-22	sampling	Survey Sampling
2016-12-21	condSURV	Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data
2016-12-21	crosstalk	Inter-Widget Interactivity for HTML Widgets
2016-12-21	growcurves	Bayesian Semi and Nonparametric Growth Curve Models that Additionally Include Multiple Membership Random Effects
2016-12-21	ms.sev	Package for Calculation of ARMSS, Local MSSS and Global MSSS
2016-12-21	pgee.mixed	Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes
2016-12-21	rocNIT	Non-Inferiority Test for Paired ROC Curves
2016-12-21	SpaTimeClus	Model-Based Clustering of Spatio-Temporal Data
2016-12-20	akima	Interpolation of Irregularly and Regularly Spaced Data
2016-12-20	aws.ses	AWS SES Client Package
2016-12-20	OData	R Helper for OData Web Services
2016-12-20	radarchart	Radar Chart from 'Chart.js'
2016-12-20	scdhlm	Estimating Hierarchical Linear Models for Single-Case Designs
2016-12-20	SPPcomb	Combining Different Spatial Datasets in Cancer Risk Estimation
2016-12-20	stmgui	Shiny Application for Creating STM Models
2016-12-19	bcRep	Advanced Analysis of B Cell Receptor Repertoire Data
2016-12-19	DEoptim	Global Optimization by Differential Evolution
2016-12-19	pipeliner	Machine Learning Pipelines for R
2016-12-18	DirectStandardisation	Adjusted Means and Proportions by Direct Standardisation
2016-12-18	longurl	Expand Short URLs
2016-12-18	magicfor	Magic Functions to Obtain Results from for Loops
2016-12-18	rPref	Database Preferences and Skyline Computation
2016-12-18	tigerstats	R Functions for Elementary Statistics
2016-12-17	MTDrh	Mass Transportation Distance Rank Histogram
2016-12-17	MWRidge	Two Stage Moving-Window Ridge Method for Prediction and Estimation
2016-12-17	PepSAVIms	PepSAVI-MS Data Analysis
2016-12-17	PGM2	Nested Resolvable Designs and their Associated Uniform Designs
2016-12-17	ramify	Additional Matrix Functionality
2016-12-17	touch	Tools of Utilization and Cost in Healthcare
2016-12-16	acc	Exploring Accelerometer Data
2016-12-16	binseqtest	Exact Binary Sequential Designs and Analysis
2016-12-16	Ecdat	Data Sets for Econometrics
2016-12-16	FinancialMath	Financial Mathematics for Actuaries
2016-12-16	multiDimBio	Multivariate Analysis and Visualization for Biological Data
2016-12-16	polyfreqs	Bayesian Population Genomics in Autopolyploids
2016-12-16	sjdbc	JDBC Driver Interface
2016-12-16	tripack	Triangulation of Irregularly Spaced Data
2016-12-15	coprimary	Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials
2016-12-15	KoNLP	Korean NLP Package
2016-12-15	MvBinary	Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution
2016-12-15	skellam	Densities and Sampling for the Skellam Distribution
2016-12-15	tibbrConnector	R Interface to TIBCO 'tibbr'
2016-12-15	tmvnsim	Truncated Multivariate Normal Simulation
2016-12-14	activpalProcessing	Process activPAL Events Files
2016-12-14	BTYDplus	Probabilistic Models for Assessing and Predicting your Customer Base
2016-12-14	ca	Simple, Multiple and Joint Correspondence Analysis
2016-12-14	ClustVarLV	Clustering of Variables Around Latent Variables
2016-12-14	colorspace	Color Space Manipulation
2016-12-14	datasets.load	Interface for Loading Datasets
2016-12-14	VizOR	Graphical Visualization Tools for Complex Observational Data with Focus on Health Sciences
2016-12-14	wux	Wegener Center Climate Uncertainty Explorer
2016-12-13	admixturegraph	Admixture Graph Manipulation and Fitting
2016-12-13	bnstruct	Bayesian Network Structure Learning from Data with Missing Values
2016-12-13	bpp	Computations Around Bayesian Predictive Power
2016-12-13	DIFtree	Item Focused Trees for the Identification of Items in Differential Item Functioning
2016-12-13	fanc	Penalized Likelihood Factor Analysis via Nonconvex Penalty
2016-12-13	GrapheR	A Multi-Platform GUI for Drawing Customizable Graphs in R
2016-12-13	MODISSnow	Provides a Function to Download MODIS Snow Cover
2016-12-13	patchSynctex	Communication Between Editor and Viewer for Literate Programs
2016-12-13	poptrend	Estimate Smooth and Linear Trends from Population Count Survey Data
2016-12-13	prclust	Penalized Regression-Based Clustering Method
2016-12-13	SocialMediaMineR	A Social Media Search and Analytic Tool
2016-12-13	sparkTable	Sparklines and Graphical Tables for TeX and HTML
2016-12-12	FRAPO	Financial Risk Modelling and Portfolio Optimisation with R
2016-12-12	ggenealogy	Visualization Tools for Genealogical Data
2016-12-12	PopED	Population (and Individual) Optimal Experimental Design
2016-12-11	ampd	An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals
2016-12-11	CollapsABEL	Generalized CDH (GCDH) Analysis
2016-12-11	DNLC	Differential Network Local Consistency Analysis
2016-12-11	errorizer	Function Errorizer
2016-12-11	pointRes	Analyzing Pointer Years and Components of Resilience
2016-12-11	reinstallr	Search and Install Missing Packages
2016-12-10	desiR	Desirability Functions for Ranking, Selecting, and Integrating Data
2016-12-10	rtrends	Analyze Download Logs from the CRAN RStudio Mirror
2016-12-09	CuCubes	MultiDimensional Feature Selection (MDFS)
2016-12-09	GLMaSPU	An Adaptive Test on High Dimensional Parameters in Generalized Linear Models
2016-12-09	INSPIRE	Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets
2016-12-09	isocir	Isotonic Inference for Circular Data
2016-12-09	magree	Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers
2016-12-09	MixedPoisson	Mixed Poisson Models
2016-12-09	QCEWAS	Fast and Easy Quality Control of EWAS Results Files
2016-12-09	rrr	Reduced-Rank Regression
2016-12-09	ShapeChange	Change-Point Estimation using Shape-Restricted Splines
2016-12-08	aws.polly	Client for AWS Polly
2016-12-08	coda	Output Analysis and Diagnostics for MCMC
2016-12-08	geomnet	Network Visualization in the 'ggplot2' Framework
2016-12-08	gofMC	Goodness of Fit Noise Analysis Using Monte Carlo Techniques
2016-12-08	icpsrdata	Reproducible Data Retrieval from the ICPSR Archive
2016-12-08	internetarchive	An API Client for the Internet Archive
2016-12-08	micromapST	Linked Micromap Plots for General U. S. and Other Geographic Areas
2016-12-08	NLPutils	Natural Language Processing Utilities
2016-12-08	oz	Plot the Australian Coastline and States
2016-12-08	polynom	A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations
2016-12-08	Radviz	Project Multidimensional Data in 2D Space
2016-12-08	snowboot	Bootstrap Methods for Network Inference
2016-12-07	DCM	Data Converter Module
2016-12-07	madsim	A Flexible Microarray Data Simulation Model
2016-12-07	seeclickfixr	Access Data from the SeeClickFix Web API
2016-12-06	Branching	Simulation and Estimation for Branching Processes
2016-12-06	bvpSolve	Solvers for Boundary Value Problems of Differential Equations
2016-12-06	icesVocab	ICES Vocabularies Database Web Services
2016-12-06	rccmisc	Miscellaneous R Functions for Swedish Regional Cancer Centers
2016-12-06	robustsae	Robust Bayesian Small Area Estimation
2016-12-06	rootSolve	Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations
2016-12-06	SafeQuant	A Toolbox for the Analysis of Proteomics Data
2016-12-05	AmmoniaConcentration	Un-Ionized Ammonia Concentration
2016-12-05	anchors	Statistical analysis of surveys with anchoring vignettes
2016-12-05	aop	Adverse Outcome Pathway Analysis
2016-12-05	bannerCommenter	Make Banner Comments with a Consistent Format
2016-12-05	bridger2	Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
2016-12-05	Causata	Analysis utilities for binary classification and Causata users
2016-12-05	diptest	Hartigan's Dip Test Statistic for Unimodality - Corrected
2016-12-05	DrBats	Data Representation: Bayesian Approach That's Sparse
2016-12-05	easypackages	Easy Loading and Installing of Packages
2016-12-05	ezec	Easy Interface to Effective Concentration Calculations
2016-12-05	FAwR	Functions and Datasets for "Forest Analytics with R"
2016-12-05	flows	Flow Selection and Analysis
2016-12-05	gafit	Genetic Algorithm for Curve Fitting
2016-12-05	gapmap	Functions for Drawing Gapped Cluster Heatmap with ggplot2
2016-12-05	ggparallel	Variations of Parallel Coordinate Plots for Categorical Data
2016-12-05	gld	Estimation and Use of the Generalised (Tukey) Lambda Distribution
2016-12-05	hsphase	Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
2016-12-05	IHSEP	Inhomogeneous Self-Exciting Process
2016-12-05	intergraph	Coercion Routines for Network Data Objects
2016-12-05	labstats	Data Sets for the Book "Experimental Design for Laboratory Biologists"
2016-12-05	melviewr	View and Classify MELODIC Output for ICA+FIX
2016-12-05	MultiBD	Multivariate Birth-Death Processes
2016-12-05	mvngGrAd	Moving Grid Adjustment in Plant Breeding Field Trials
2016-12-05	mvtboost	Tree Boosting for Multivariate Outcomes
2016-12-05	networkreporting	Tools for using Network Reporting Estimators
2016-12-05	nucim	Nucleome Imaging Toolbox
2016-12-05	optigrab	Command-Line Parsing for an R World
2016-12-05	PANDA	Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations
2016-12-05	Perc	Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network
2016-12-05	rfordummies	Code Examples to Accompany the Book "R for Dummies"
2016-12-05	rt3	Tic-Tac-Toe Package for R
2016-12-05	tswge	Applied Time Series Analysis
2016-12-05	urlshorteneR	R Wrapper for the 'Bit.ly', 'Goo.gl' and 'Is.gd' URL Shortening Services
2016-12-05	Wats	Wrap Around Time Series Graphics
2016-12-04	cmaesr	Covariance Matrix Adaptation Evolution Strategy
2016-12-04	lazyData	A LazyData Facility
2016-12-04	phuassess	Proportional Habitat Use Assessment
2016-12-04	SISIR	Sparse Interval Sliced Inverse Regression
2016-12-03	rhnerm	Random Heteroscedastic Nested Error Regression
2016-12-03	subscore	Computing Subscores in Classical Test Theory and Item Response Theory
2016-12-02	blockTools	Block, Assign, and Diagnose Potential Interference in Randomized Experiments
2016-12-02	ClimDown	Climate Downscaling Library for Daily Climate Model Output
2016-12-02	cshapes	The CShapes Dataset and Utilities
2016-12-02	pinfsc50	Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis'
2016-12-02	vkR	Access to VK API via R
2016-12-01	apc	Age-Period-Cohort Analysis
2016-12-01	deconvolveR	Empirical Bayes Estimation Strategies
2016-12-01	freqdist	Frequency Distribution
2016-12-01	gbs2ploidy	Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data
2016-12-01	rxSeq	Combined Total and Allele Specific Reads Sequencing Study
2016-11-30	camsRad	Client for CAMS Radiation Service
2016-11-30	eMLEloglin	Fitting log-Linear Models in Sparse Contingency Tables
2016-11-30	MotilityLab	Quantitative Analysis of Motion
2016-11-29	effectFusion	Bayesian Effect Fusion for Categorical Predictors
2016-11-29	listdtr	List-Based Rules for Dynamic Treatment Regimes
2016-11-29	optR	Optimization Toolbox for Solving Linear Systems
2016-11-29	Przewodnik	Datasets and Functions Used in the Book 'Przewodnik po Pakiecie R'
2016-11-29	RNHANES	Facilitates Analysis of CDC NHANES Data
2016-11-29	testassay	A Hypothesis Testing Framework for Validating an Assay for Precision
2016-11-29	tsdisagg2	Time Series Disaggregation
2016-11-28	bc3net	Gene Regulatory Network Inference with Bc3net
2016-11-28	CTM	A Text Mining Toolkit for Chinese Document
2016-11-28	CVD	Color Vision Deficiencies
2016-11-28	nice	Get or Set UNIX Niceness
2016-11-28	SACCR	SA Counterparty Credit Risk under Basel III
2016-11-28	textreuse	Detect Text Reuse and Document Similarity
2016-11-27	GeomComb	(Geometric) Forecast Combination Methods
2016-11-27	notifyme	Send Alerts to your Cellphone and Phillips Hue Lights
2016-11-27	omics	'–omics' Data Analysis Toolbox
2016-11-27	readODS	Read and Write ODS Files
2016-11-26	DALY	The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R
2016-11-26	FITSio	FITS (Flexible Image Transport System) Utilities
2016-11-26	xVA	Calculates Credit Risk Valuation Adjustments
2016-11-25	aslib	Interface to the Algorithm Selection Benchmark Library
2016-11-25	dynetNLAResistance	Resisting Neighbor Label Attack in a Dynamic Network
2016-11-25	miscTools	Miscellaneous Tools and Utilities
2016-11-25	multicool	Permutations of Multisets in Cool-Lex Order
2016-11-25	rDEA	Robust Data Envelopment Analysis (DEA) for R
2016-11-25	rIsing	High-Dimensional Ising Model Selection
2016-11-25	rlo	Utilities for Writing to 'LibreOffice Writer' Documents
2016-11-25	survAWKMT2	Two-Sample Tests Based on Differences of Kaplan-Meier Curves
2016-11-24	AnalyzeTS	Analyze Fuzzy Time Series
2016-11-24	multiwave	Estimation of Multivariate Long-Memory Models Parameters
2016-11-24	oai	General Purpose 'Oai-PMH' Services Client
2016-11-24	quarrint	Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks
2016-11-24	RcppExamples	Examples using 'Rcpp' to Interface R and C++
2016-11-24	RDStreeboot	RDS Tree Bootstrap Method
2016-11-23	CombinS	Construction Methods of some Series of PBIB Designs
2016-11-23	epistasis	Detecting Epistatic Selection with Partially Observed Genotype Data
2016-11-23	FBFsearch	Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors
2016-11-23	gridsampler	A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies
2016-11-23	ph2mult	Phase II Clinical Trial Design for Multinomial Endpoints
2016-11-23	pumilioR	Pumilio in R
2016-11-23	pushoverr	Send Push Notifications using Pushover
2016-11-23	SpaCCr	Spatial Convex Clustering
2016-11-23	strat	An Implementation of the Stratification Index
2016-11-22	bayesDem	Graphical User Interface for bayesTFR, bayesLife and bayesPop
2016-11-22	mbclusterwise	Clusterwise Multiblock Analyses
2016-11-22	MCAvariants	Multiple Correspondence Analysis Variants
2016-11-22	ockc	Order Constrained Solutions in k-Means Clustering
2016-11-22	ParallelTree	Parallel Tree
2016-11-22	POT	Generalized Pareto Distribution and Peaks Over Threshold
2016-11-22	Rdtq	Density Tracking by Quadrature
2016-11-22	SeleMix	Selective Editing via Mixture Models
2016-11-21	ebdbNet	Empirical Bayes Estimation of Dynamic Bayesian Networks
2016-11-21	gamlss.tr	Generating and Fitting Truncated ‘gamlss.family’ Distributions
2016-11-21	HAC	Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC)
2016-11-21	NFP	Network Fingerprint Framework in R
2016-11-21	pstest	Specification Tests for Parametric Propensity Score Models
2016-11-21	relabeLoadings	Relabel Loadings from MCMC Output for Confirmatory Factor Analysis
2016-11-20	ADCT	Adaptive Design in Clinical Trials
2016-11-20	grpSLOPE	Group Sorted L1 Penalized Estimation
2016-11-20	minpack.lm	R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds
2016-11-20	mpmi	Mixed-Pair Mutual Information Estimators
2016-11-20	rsnps	Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web
2016-11-20	Trading	Trades, Curves, Rating Tables, Add-on Tables, CSAs
2016-11-19	climbeR	Calculate Average Minimal Depth of a Maximal Subtree for 'ranger' Package Forests
2016-11-19	DEoptimR	Differential Evolution Optimization in Pure R
2016-11-19	nhstplot	Plot Null Hypothesis Significance Tests
2016-11-18	meboot	Maximum Entropy Bootstrap for Time Series
2016-11-18	rehh	Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2016-11-17	DGCA	Differential Gene Correlation Analysis
2016-11-17	gwfa	Geographically Weighted Fractal Analysis
2016-11-17	hit	Hierarchical Inference Testing
2016-11-17	hydrostats	Hydrologic Indices for Daily Time Series Data
2016-11-17	KOGMWU	Functional Summary and Meta-Analysis of Gene Expression Data
2016-11-17	NegBinBetaBinreg	Negative Binomial and Beta Binomial Bayesian Regression Models
2016-11-17	tinsel	Transform Functions using Decorators
2016-11-17	udunits2	Udunits-2 Bindings for R
2016-11-16	ibmcraftr	Toolkits to Develop Individual-Based Models in Infectious Disease
2016-11-16	manhattanly	Interactive Q-Q and Manhattan Plots Using 'plotly.js'
2016-11-15	apdesign	An Implementation of the Additive Polynomial Design Matrix
2016-11-15	colormap	Color Palettes using Colormaps Node Module
2016-11-15	fdrci	Permutation-Based FDR Point and Confidence Interval Estimation
2016-11-15	WEE	Weighted Estimated Equation (WEE) Approaches in Genetic Case-Control Studies
2016-11-14	fiftystater	Map Data to Visualize the Fifty U.S. States with Alaska and Hawaii Insets
2016-11-14	httpcode	'HTTP' Status Code Helper
2016-11-14	localgauss	Estimating Local Gaussian Parameters
2016-11-14	locits	Test of Stationarity and Localized Autocovariance
2016-11-13	miscFuncs	Miscellaneous Useful Functions Including LaTeX Tables, Kalman Filtering and Development Tools
2016-11-13	peacots	Periodogram Peaks in Correlated Time Series
2016-11-13	PhyInformR	Rapid Calculation of Phylogenetic Information Content
2016-11-13	pkgKitten	Create Simple Packages Which Do not Upset R Package Checks
2016-11-13	plotluck	'ggplot2' Version of "I'm Feeling Lucky!"
2016-11-13	refund.shiny	Interactive Plotting for Functional Data Analyses
2016-11-12	CSclone	Bayesian Nonparametric Modeling in R
2016-11-12	flock	Process Synchronization Using File Locks
2016-11-12	jointNmix	Joint N-Mixture Models for Site-Associated Species
2016-11-12	LEANR	Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes
2016-11-12	Planesmuestra	Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD 414 Acceptance Sampling Plan
2016-11-12	ptest	Periodicity Tests in Short Time Series
2016-11-12	qiitr	R Interface to Qiita API
2016-11-12	quantification	Quantification of Qualitative Survey Data
2016-11-12	RcmdrPlugin.TeachingDemos	Rcmdr Teaching Demos Plug-in
2016-11-12	sparkline	'jQuery' Sparkline 'htmlwidget'
2016-11-12	XRSCC	Statistical Quality Control Simulation
2016-11-11	medfate	Mediterranean Forest Simulation
2016-11-11	obAnalytics	Limit Order Book Analytics
2016-11-11	OrthoPanels	Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects
2016-11-11	rrcovHD	Robust Multivariate Methods for High Dimensional Data
2016-11-10	arrApply	Apply a Function to a Margin of an Array
2016-11-10	cthreshER	Continuous Threshold Expectile Regression
2016-11-10	exteriorMatch	Constructs the Exterior Match from Two Matched Control Groups
2016-11-10	RSIP	Remote Sensing and Image Processing
2016-11-10	zoocat	'zoo' Objects with Column Attributes
2016-11-09	feather	R Bindings to the Feather 'API'
2016-11-09	HARtools	Read HTTP Archive ('HAR') Data
2016-11-09	MCMC.qpcr	Bayesian Analysis of qRT-PCR Data
2016-11-08	drgee	Doubly Robust Generalized Estimating Equations
2016-11-08	horseshoe	Implementation of the Horseshoe Prior
2016-11-08	mnlogit	Multinomial Logit Model
2016-11-08	msaFACE	Moving Subset Analysis FACE
2016-11-08	MSGLasso	Multivariate Sparse Group Lasso for the Multivariate Multiple Linear Regression with an Arbitrary Group Structure
2016-11-08	pirate	Generated Effect Modifier
2016-11-08	rehh.data	Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2016-11-08	wvtool	Image Tools for Automated Wood Identification
2016-11-07	CollocInfer	Collocation Inference for Dynamic Systems
2016-11-07	diffrprojectswidget	Visualization for 'diffrprojects'
2016-11-07	OptimalDesign	Algorithms for D-, A-, and IV-Optimal Designs
2016-11-07	regtools	Regression Tools
2016-11-07	Rga4gh	An Interface to the GA4GH API
2016-11-07	SparseTSCGM	Sparse Time Series Chain Graphical Models
2016-11-07	sparsevar	A Package for Sparse VAR/VECM Estimation
2016-11-07	starmie	Population Structure Model Inference and Visualisation
2016-11-07	varband	Variable Banding of Large Precision Matrices
2016-11-06	diffrprojects	Projects for Text Version Comparison and Analytics in R
2016-11-06	pch	Piecewise Constant Hazards Models for Censored and Truncated Data
2016-11-05	dams	Dams in the United States from the National Inventory of Dams (NID)
2016-11-05	ei	Ecological Inference
2016-11-05	gettz	Get the Timezone Information
2016-11-05	varSel	Sequential Forward Floating Selection using Jeffries-Matusita Distance
2016-11-04	ordcrm	Likelihood-Based Continual Reassessment Method (CRM) Dose Finding Designs
2016-11-04	packagedocs	Build Website of Package Documentation
2016-11-04	RLRsim	Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models
2016-11-03	ADDT	Analysis of Accelerated Destructive Degradation Test Data
2016-11-03	geojsonlint	Tools for Validating 'GeoJSON'
2016-11-03	MiRAnorm	Adaptive Normalization for miRNA Data
2016-11-03	packHV	A few Useful Functions for Statisticians
2016-11-03	PhViD	PharmacoVigilance Signal Detection
2016-11-02	ConnMatTools	Tools for Working with Connectivity Data
2016-11-02	ez	Easy Analysis and Visualization of Factorial Experiments
2016-11-01	BMRV	Bayesian Models for Rare Variant Association Analysis
2016-11-01	colorplaner	A 'ggplot2' Extension to Visualize Two Variables per Color Aesthetic Through Color Space Projections
2016-11-01	dtables	Simplifying Descriptive Frequencies and Statistics
2016-11-01	rtext	R6 Objects for Text and Data
2016-11-01	stringb	Convenient Base R String Handling
2016-10-31	colourlovers	R Client for the COLOURlovers API
2016-10-31	finreportr	Financial Data from U.S. Securities and Exchange Commission
2016-10-31	hoardeR	Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices
2016-10-31	ManyTests	Multiple Testing Procedures of Cox (2011) and Wong and Cox (2007)
2016-10-31	rRAP	Real-Time Adaptive Penalization for Streaming Lasso Models
2016-10-30	AdjBQR	Adjusted Bayesian Quantile Regression Inference
2016-10-30	gtheory	Apply Generalizability Theory with R
2016-10-30	InformationValue	Performance Analysis and Companion Functions for Binary Classification Models
2016-10-30	mhtboot	Multiple Hypothesis Test Based on Distribution of p Values
2016-10-30	RDota2	An R Steam API Client for Valve's Dota2
2016-10-30	rgeoapi	Get Information from the GeoAPI
2016-10-30	Rlinkedin	Access to the LinkedIn API via R
2016-10-29	acepack	ACE and AVAS for Selecting Multiple Regression Transformations
2016-10-29	endogenous	Classical Simultaneous Equation Models
2016-10-29	ggswissmaps	Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects
2016-10-29	IMFData	R Interface for International Monetary Fund(IMF) Data API
2016-10-29	ltbayes	Simulation-Based Bayesian Inference for Latent Traits of Item Response Models
2016-10-29	NetworkComparisonTest	Statistical Comparison of Two Networks Based on Three Invariance Measures
2016-10-29	proto	Prototype Object-Based Programming
2016-10-29	QFASA	Quantitative Fatty Acid Signature Analysis
2016-10-29	Ramble	Parser Combinator for R
2016-10-29	SpeciesMix	Fit Mixtures of Archetype Species
2016-10-29	spftir	Pre-Processing and Analysis of Mid-Infrared Spectral Region
2016-10-29	triangulation	Determine Position of Observer
2016-10-28	MIDN	Nearly Exact Sample Size Calculation for Exact Powerful Nonrandomized Tests for Differences Between Binomial Proportions
2016-10-28	ontologyPlot	Functions for Visualising Sets of Ontological Terms
2016-10-28	ontologySimilarity	Functions for Calculating Ontological Similarities
2016-10-28	PatternClass	Class-Focused Pattern Metric Comparisons using Simulation
2016-10-28	ShapeSelectForest	Shape Selection for Landsat Time Series of Forest Dynamics
2016-10-28	spellcheckr	Correct the Spelling of a Given Word in the English Language
2016-10-27	fizzbuzzR	Fizz Buzz Implementation
2016-10-27	RStata	A Bit of Glue Between R and Stata
2016-10-26	countyweather	Compiles Meterological Data for U.S. Counties
2016-10-26	fasttime	Fast Utility Function for Time Parsing and Conversion
2016-10-26	iRafNet	Integrative Random Forest for Gene Regulatory Network Inference
2016-10-26	IRATER	A R Interface for the Instantaneous RATEs (IRATE) Model
2016-10-26	ROracle	OCI Based Oracle Database Interface for R
2016-10-26	ShapePattern	Tools for Analyzing Planar Shape and Associated Patterns
2016-10-25	adaptivetau	Tau-Leaping Stochastic Simulation
2016-10-25	DDHFm	Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
2016-10-25	feedeR	Read RSS/Atom Feeds from R
2016-10-25	GeneticSubsetter	Identify Favorable Subsets of Germplasm Collections
2016-10-25	gym	Provides Access to the OpenAI Gym API
2016-10-25	homeR	Useful Functions for Building Physics
2016-10-25	JRF	Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks
2016-10-25	pbdDEMO	Programming with Big Data – Demonstrations and Examples Using 'pbdR' Packages
2016-10-25	readbulk	Read and Combine Multiple Data Files
2016-10-25	sns	Stochastic Newton Sampler (SNS)
2016-10-24	graphicsQC	Quality Control for Graphics in R
2016-10-24	ldatuning	Tuning of the Latent Dirichlet Allocation Models Parameters
2016-10-23	bacr	Bayesian Adjustment for Confounding
2016-10-23	ClickClust	Model-Based Clustering of Categorical Sequences
2016-10-23	rchallenge	A Simple Data Science Challenge System
2016-10-23	stsm	Structural Time Series Models
2016-10-22	countytimezones	Convert from UTC to Local Time for United States Counties
2016-10-22	Exact	Unconditional Exact Test
2016-10-22	gitgadget	Rstudio Addin for Version Control and Assignment Management using Git
2016-10-21	pbdDMAT	'pbdR' Distributed Matrix Methods
2016-10-21	RI2by2	Randomization Inference for Treatment Effects on a Binary Outcome
2016-10-21	Rknots	Topological Analysis of Knotted Proteins, Biopolymers and 3D Structures
2016-10-21	scmamp	Statistical Comparison of Multiple Algorithms in Multiple Problems
2016-10-20	ABC.RAP	Array Based CpG Region Analysis Pipeline
2016-10-20	aplore3	Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013)
2016-10-20	Barnard	Barnard's Unconditional Test
2016-10-20	corlink	Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields
2016-10-20	ggloop	Create 'ggplot2' Plots in a Loop
2016-10-20	MullerPlot	Generates Muller Plot from Population/Abundance/Frequency Dynamics Data
2016-10-20	R.matlab	Read and Write MAT Files and Call MATLAB from Within R
2016-10-20	Rsurrogate	Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information
2016-10-20	SafeBayes	Generalized and Safe-Bayesian Ridge and Lasso Regression
2016-10-20	validatejsonr	Validate JSON Against JSON Schemas
2016-10-20	wavethresh	Wavelets Statistics and Transforms
2016-10-19	COUNT	Functions, Data and Code for Count Data
2016-10-19	gamlss.add	Extra Additive Terms for GAMLSS Models
2016-10-19	PCSinR	Parallel Constraint Satisfaction Networks in R
2016-10-18	BarcodingR	Species Identification using DNA Barcodes
2016-10-18	cryst	Calculate the Relative Crystallinity of Starch by XRD and FTIR
2016-10-18	NPCD	Nonparametric Methods for Cognitive Diagnosis
2016-10-18	sirad	Functions for Calculating Daily Solar Radiation and Evapotranspiration
2016-10-18	TDPanalysis	Granier's Sap Flow Sensors (TDP) Analysis
2016-10-18	trip	Tools for the Analysis of Animal Track Data
2016-10-18	vdg	Variance Dispersion Graphs and Fraction of Design Space Plots
2016-10-18	VIMGUI	Visualization and Imputation of Missing Values - Graphical User Interface
2016-10-17	gRain	Graphical Independence Networks
2016-10-17	GraphFactor	Network Topology of Intravariable Clusters with Intervariable Links
2016-10-17	lucr	Currency Formatting and Conversion
2016-10-17	metafuse	Fused Lasso Approach in Regression Coefficient Clustering
2016-10-17	nmfgpu4R	Non-Negative Matrix Factorization (NMF) using CUDA
2016-10-17	pageviews	An API Client for Wikimedia Traffic Data
2016-10-17	Rchoice	Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
2016-10-16	betategarch	Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models
2016-10-16	histogram	Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
2016-10-16	KnapsackSampling	Generate Feasible Samples of a Knapsack Problem
2016-10-16	ssym	Fitting Semi-Parametric log-Symmetric Regression Models
2016-10-15	ADPclust	Fast Clustering Using Adaptive Density Peak Detection
2016-10-15	fontLiberation	Liberation Fonts
2016-10-15	mnormt	The Multivariate Normal and t Distributions
2016-10-15	RSarules	Random Sampling Association Rules from a Transaction Dataset
2016-10-15	SimReg	Similarity Regression
2016-10-15	types	Type Annotations
2016-10-14	clues	Clustering Method Based on Local
2016-10-14	dbfaker	A Tool to Ensure the Validity of Database Writes
2016-10-14	graphscan	Cluster Detection with Hypothesis Free Scan Statistic
2016-10-14	highmean	Two-Sample Tests for High-Dimensional Mean Vectors
2016-10-14	in2extRemes	Into the extRemes Package
2016-10-14	ISR3	Iterative Sequential Regression
2016-10-14	scan	Single-Case Data Analyses for Single and Multiple AB Designs
2016-10-14	seismicRoll	Fast Rolling Functions for Seismology using Rcpp
2016-10-14	snow	Simple Network of Workstations
2016-10-14	tutorial	Convert R Markdown Files to DataCamp Light HTML Files
2016-10-13	convertr	Convert Between Units
2016-10-13	DMwR2	Functions and Data for the Second Edition of "Data Mining with R"
2016-10-13	easyreg	Easy Regression
2016-10-13	ENiRG	Ecological Niche in R and GRASS
2016-10-13	MetaAnalyser	An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine
2016-10-13	performanceEstimation	An Infra-Structure for Performance Estimation of Predictive Models
2016-10-13	pgraph	Build Dependency Graphs using Projection
2016-10-12	daewr	Design and Analysis of Experiments with R
2016-10-12	MethodCompare	Bias and Precision Plots to Compare Two Measurements with Possibly Heteroscedastic Measurement Errors
2016-10-12	mpr	Multi-Parameter Regression (MPR)
2016-10-12	rbokeh	R Interface for Bokeh
2016-10-12	seqmon	Group Sequential Design Class for Clinical Trials
2016-10-12	shinythemes	Themes for Shiny
2016-10-11	exp2flux	Convert Gene EXPression Data to FBA FLUXes
2016-10-11	lokern	Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
2016-10-11	regspec	Non-Parametric Bayesian Spectrum Estimation for Multirate Data
2016-10-10	dti	Analysis of Diffusion Weighted Imaging (DWI) Data
2016-10-10	haploReconstruct	Reconstruction of Haplotype-Blocks from Time Series Data
2016-10-10	mcprofile	Testing Generalized Linear Hypotheses for Generalized Linear Model Parameters by Profile Deviance
2016-10-10	rgw	Goodman-Weare Affine-Invariant Sampling
2016-10-10	tweenr	Interpolate Data for Smooth Animations
2016-10-09	QQperm	Permutation Based QQ Plot and Inflation Factor Estimation
2016-10-09	reldist	Relative Distribution Methods
2016-10-09	selectiongain	A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection
2016-10-09	valorate	Velocity and Accuracy of the LOg-RAnk TEst
2016-10-08	extremogram	Estimation of Extreme Value Dependence for Time Series Data
2016-10-08	ptwikiwords	Words Used in Portuguese Wikipedia
2016-10-07	gamair	Data for "GAMs: An Introduction with R"
2016-10-07	machina	Machina Time Series Generation and Backtesting
2016-10-07	RSeed	Borenstein Analysis
2016-10-07	sharpeRratio	Moment-Free Estimation of Sharpe Ratios
2016-10-07	shinyTime	A Time Input Widget for Shiny
2016-10-07	simLife	Simulation of Fatigue Lifetimes
2016-10-06	reportr	A General Message and Error Reporting System
2016-10-06	tsSelect	Execution of Time Series Models
2016-10-05	automultinomial	Autologistic and Automultinomial Spatial Regression and Variable Selection
2016-10-05	codetools	Code Analysis Tools for R
2016-10-05	RAMpath	Structural Equation Modeling Using the Reticular Action Model (RAM) Notation
2016-10-05	sAIC	Akaike Information Criterion for Sparse Estimation
2016-10-05	SAPP	Statistical Analysis of Point Processes
2016-10-04	changepoint	Methods for Changepoint Detection
2016-10-04	ordDisp	Separating Location and Dispersion in Ordinal Regression Models
2016-10-04	RSurveillance	Design and Analysis of Disease Surveillance Activities
2016-10-03	spcr	Sparse Principal Component Regression
2016-10-03	tigerhitteR	Pre-Process of Time Series Data Set in R
2016-10-02	EBASS	Sample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information
2016-10-02	enviPat	Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
2016-10-02	fixedTimeEvents	The Distribution of Distances Between Discrete Events in Fixed Time
2016-10-02	gofCopula	Goodness-of-Fit Tests for Copulae
2016-10-01	expandFunctions	Feature Matrix Builder
2016-10-01	LANDD	Liquid Association for Network Dynamics Detection
2016-10-01	linkR	3D Lever and Linkage Mechanism Modeling
2016-10-01	sBIC	Computing the Singular BIC for Multiple Models
2016-10-01	seleniumPipes	R Client Implementing the W3C WebDriver Specification
2016-10-01	smam	Statistical Modeling of Animal Movements
2016-10-01	supervisedPRIM	Supervised Classification Learning and Prediction using Patient Rule Induction Method (PRIM)
2016-09-30	FrF2	Fractional Factorial Designs with 2-Level Factors
2016-09-30	sublime	Automatic Lesion Incidence Estimation and Detection using Multi-Modality Longitudinal Magnetic Resonance Images
2016-09-29	addinslist	Discover and Install Useful RStudio Addins
2016-09-29	bfa	Bayesian Factor Analysis
2016-09-29	BigSEM	Constructing Large Systems of Structural Equations
2016-09-29	DPBBM	Dirichlet Process Beta-Binomial Mixture
2016-09-29	gdmp	Genomic Data Management
2016-09-29	MetaIntegrator	Meta-Analysis of Gene Expression Data
2016-09-29	npsp	Nonparametric Spatial Statistics
2016-09-29	spcadjust	Functions for Calibrating Control Charts
2016-09-28	AncestryMapper	Assigning Ancestry Based on Population References
2016-09-28	curry	Partial Function Application with %<%, %-<%, and %><%
2016-09-28	gcbd	'GPU'/CPU Benchmarking in Debian-Based Systems
2016-09-28	MatchItSE	Calculates SE for Matched Samples from 'MatchIt'
2016-09-28	papayar	View Medical Research Images using the Papaya JavaScript Library
2016-09-28	ragtop	Pricing Equity Derivatives with Extensions of Black-Scholes
2016-09-28	RCircos	Circos 2D Track Plot
2016-09-28	rcmdcheck	Run 'R CMD check' from 'R' and Capture Results
2016-09-27	nontarget	Detecting Isotope, Adduct and Homologue Relations in LC-MS Data
2016-09-27	RSauceLabs	R Wrapper for 'SauceLabs' REST API
2016-09-27	sbtools	USGS ScienceBase Tools
2016-09-26	activity	Animal Activity Statistics
2016-09-26	BioFTF	Biodiversity Assessment Using Functional Tools
2016-09-26	CAMAN	Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
2016-09-26	dataframes2xls	Write Data Frames to Xls Files
2016-09-26	GUILDS	Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure
2016-09-26	malani	Machine Learning Assisted Network Inference
2016-09-26	momentchi2	Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables
2016-09-26	PersomicsArray	Automated Persomics Array Image Extraction
2016-09-26	svgPanZoom	R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
2016-09-26	textmining	Integration of Text Mining and Topic Modeling Packages
2016-09-25	ensembleR	Ensemble Models in R
2016-09-24	energyr	Data Published by the United States Federal Energy Regulatory Commission
2016-09-24	geepack	Generalized Estimating Equation Package
2016-09-24	PANICr	PANIC Tests of Nonstationarity
2016-09-24	pewdata	Reproducible Retrieval of Pew Research Center Datasets
2016-09-24	QRAGadget	A 'Shiny' Gadget for Interactive 'QRA' Visualizations
2016-09-24	Rdice	A Collection of Functions to Experiment Dice Rolls
2016-09-23	fishMod	Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models
2016-09-23	hkevp	Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012)
2016-09-23	pbdPROF	Programming with Big Data — MPI Profiling Tools
2016-09-23	prepdat	Preparing Experimental Data for Statistical Analysis
2016-09-23	pseval	Methods for Evaluating Principal Surrogates of Treatment Response
2016-09-23	SuppDists	Supplementary Distributions
2016-09-23	trelloR	R API for Trello
2016-09-22	contrast	A Collection of Contrast Methods
2016-09-22	desirability	Function Optimization and Ranking via Desirability Functions
2016-09-22	FuzzyMCDM	Multi-Criteria Decision Making Methods for Fuzzy Data
2016-09-22	iemisctext	Irucka Embry's Miscellaneous Text Collection
2016-09-22	MCDM	Multi-Criteria Decision Making Methods for Crisp Data
2016-09-22	onlinePCA	Online Principal Component Analysis
2016-09-22	rcanvec	Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada
2016-09-22	RcmdrPlugin.PcaRobust	R Commander Plug-in for Robust Principal Component Analysis
2016-09-22	sparseLDA	Sparse Discriminant Analysis
2016-09-22	spikes	Detecting Election Fraud from Irregularities in Vote-Share Distributions
2016-09-22	strategicplayers	Strategic Players
2016-09-22	topologyGSA	Gene Set Analysis Exploiting Pathway Topology
2016-09-21	BSGW	Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression
2016-09-21	coreNLP	Wrappers Around Stanford CoreNLP Tools
2016-09-21	dCovTS	Distance Covariance and Correlation for Time Series Analysis
2016-09-21	simPATHy	A Method for Simulating Data from Perturbed Biological Pathways
2016-09-21	STEPCAM	ABC-SMC Inference of STEPCAM
2016-09-21	textgRid	Praat TextGrid Objects in R
2016-09-21	ungeneanno	Collate Gene Annotation Data from Uniprot and NIH Gene Databases
2016-09-20	aspi	Analysis of Symmetry of Parasitic Infections
2016-09-20	citr	'RStudio' Add-in to Insert Markdown Citations
2016-09-20	coenoflex	Gradient-Based Coenospace Vegetation Simulator
2016-09-20	eva	Extreme Value Analysis with Goodness-of-Fit Testing
2016-09-20	GMDH	Short Term Forecasting via GMDH-Type Neural Network Algorithms
2016-09-20	hdlm	Fitting High Dimensional Linear Models
2016-09-20	optpart	Optimal Partitioning of Similarity Relations
2016-09-20	PBSddesolve	Solver for Delay Differential Equations
2016-09-20	tab	Functions for Creating Summary Tables for Statistical Reports
2016-09-19	htdp	Horizontal Time Dependent Positioning
2016-09-19	joinXL	Perform Joins or Minus Queries on 'Excel' Files
2016-09-19	Tlasso	Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models
2016-09-19	UCR.ColumnNames	Fixes Column Names for Uniform Crime Report "Offenses Known and Clearance by Arrest" Datasets
2016-09-18	fitdc	Garmin FIT File Decoder
2016-09-17	brm	Binary Regression Model
2016-09-17	BTR	Training and Analysing Asynchronous Boolean Models
2016-09-17	PortfolioEffectEstim	High Frequency Price Estimators by PortfolioEffect
2016-09-17	remote	Empirical Orthogonal Teleconnections in R
2016-09-17	telegram	R Wrapper Around the Telegram Bot API
2016-09-17	timevis	Create Interactive Timeline Visualizations in R
2016-09-16	AEDForecasting	Change Point Analysis in ARIMA Forecasting
2016-09-16	asremlPlus	Augments the Use of 'ASReml-R' in Fitting Mixed Models
2016-09-16	BalanceCheck	Balance Check for Multiple Covariates in Matched Observational Studies
2016-09-16	coRanking	Co-Ranking Matrix
2016-09-16	ezknitr	Avoid the Typical Working Directory Pain When Using 'knitr'
2016-09-16	fishkirkko2015	Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland
2016-09-16	pcaPA	Parallel Analysis for Ordinal and Numeric Data using Polychoric and Pearson Correlations with S3 Classes
2016-09-16	qrencoder	Quick Response Code (QR Code) / Matrix Barcode Creator
2016-09-16	read.dbc	Read Data Stored in DBC (Compressed DBF) Files
2016-09-16	splitfngr	Combined Evaluation and Split Access of Functions
2016-09-15	adimpro	Adaptive Smoothing of Digital Images
2016-09-15	CUMP	Analyze Multivariate Phenotypes by Combining Univariate Results
2016-09-15	DiceOptim	Kriging-Based Optimization for Computer Experiments
2016-09-15	fmri	Analysis of fMRI Experiments
2016-09-15	MetaboQC	Normalize Metabolomic Data using QC Signal
2016-09-15	PEGroupTesting	Population Proportion Estimation using Group Testing
2016-09-15	RRedshiftSQL	R Interface to the 'Redshift' Database
2016-09-15	sonar	Fundamental Formulas for Sonar
2016-09-15	spectral	Common Methods of Spectral Data Analysis
2016-09-14	customizedTraining	Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models
2016-09-14	DamiaNN	Neural Network Numerai
2016-09-14	EDR	Estimation of the Effective Dimension Reduction ('EDR') Space
2016-09-14	EnsemblePCReg	Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning
2016-09-14	EnsemblePenReg	Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners
2016-09-14	pipefittr	Convert Nested Functions to Pipes
2016-09-14	qqvases	Animated Normal Quantile-Quantile Plots
2016-09-14	rBayesianOptimization	Bayesian Optimization of Hyperparameters
2016-09-14	regexPipes	Wrappers Around 'base::grep()' for Use with Pipes
2016-09-14	robmed	(Robust) Mediation Analysis
2016-09-14	SmartSifter	Online Unsupervised Outlier Detection Using Finite Mixtures with Discounting Learning Algorithms
2016-09-14	StepwiseTest	Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion
2016-09-14	sweidnumbr	Handling of Swedish Identity Numbers
2016-09-13	algorithmia	Allows you to Easily Interact with the Algorithmia Platform
2016-09-13	altmeta	Alternative Meta-Analysis Methods
2016-09-13	EnsembleBase	Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
2016-09-13	EnsembleCV	Extensible Package for Cross-Validation-Based Integration of Base Learners
2016-09-13	fastcmh	Significant Interval Discovery with Categorical Covariates
2016-09-13	GUIDE	GUI for DErivatives in R
2016-09-13	hopbyhop	Transmissions and Receptions in a Hop by Hop Network
2016-09-13	LEAP	Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering
2016-09-13	lifecourse	Quantification of Lifecourse Fluidity
2016-09-13	whoapi	A 'Whoapi' API Client
2016-09-12	BootMRMR	Bootstrap-MRMR Technique for Informative Gene Selection
2016-09-12	deadband	Statistical Deadband Algorithms Comparison
2016-09-12	GWsignif	Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests
2016-09-12	stabledist	Stable Distribution Functions
2016-09-12	StreamMetabolism	Calculate Single Station Metabolism from Diurnal Oxygen Curves
2016-09-12	stripless	Structured Trellis Displays Without Strips for Lattice Graphics
2016-09-11	ARCensReg	Fitting Univariate Censored Linear Regression Model with Autoregressive Errors
2016-09-11	crp.CSFP	CreditRisk+ Portfolio Model
2016-09-11	elasticIsing	Ising Network Estimation using Elastic Net and k-Fold Cross-Validation
2016-09-11	endtoend	Transmissions and Receptions in an End to End Network
2016-09-11	farff	A Faster 'ARFF' File Reader and Writer
2016-09-11	Ritc	Isothermal Titration Calorimetry (ITC) Data Analysis
2016-09-10	cyclocomp	Cyclomatic Complexity of R Code
2016-09-10	qha	Qualitative Harmonic Analysis
2016-09-10	rasterImage	An Improved Wrapper of Image()
2016-09-10	riem	Accesses Weather Data from the Iowa Environment Mesonet
2016-09-10	statnet	Software Tools for the Statistical Analysis of Network Data
2016-09-09	alluvial	Alluvial Diagrams
2016-09-09	alphaOutlier	Obtain Alpha-Outlier Regions for Well-Known Probability Distributions
2016-09-09	ecdfHT	Empirical CDF for Heavy Tailed Data
2016-09-09	FME	A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis
2016-09-09	inbreedR	Analysing Inbreeding Based on Genetic Markers
2016-09-09	OpenStreetMap	Access to Open Street Map Raster Images
2016-09-09	pcrcoal	Implementing the Coalescent Approach to PCR Simulation Developed by Weiss and Von Haeseler (NAR, 1997)
2016-09-09	permute	Functions for Generating Restricted Permutations of Data
2016-09-09	psychotree	Recursive Partitioning Based on Psychometric Models
2016-09-09	softmaxreg	Training Multi-Layer Neural Network for Softmax Regression and Classification
2016-09-08	BayesMixSurv	Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
2016-09-08	etseed	Client for 'etcd', a 'Key-value' Database
2016-09-08	GSAQ	Gene Set Analysis with QTL
2016-09-08	mpt	Multinomial Processing Tree Models
2016-09-08	phylosim	Flexible Simulations of Biological Sequence Evolution
2016-09-08	RegressionFactory	Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions
2016-09-07	EMA	Easy Microarray Data Analysis
2016-09-07	ggRandomForests	Visually Exploring Random Forests
2016-09-07	IsingFit	Fitting Ising Models Using the ELasso Method
2016-09-06	AquaEnv	Integrated Development Toolbox for Aquatic Chemical Model Generation
2016-09-06	dhga	Differential Hub Gene Analysis
2016-09-06	imputeMissings	Impute Missing Values in a Predictive Context
2016-09-06	plotwidgets	Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots
2016-09-06	SpadeR	Species-Richness Prediction and Diversity Estimation with R
2016-09-06	tgcd	Thermoluminescence Glow Curve Deconvolution
2016-09-06	urca	Unit Root and Cointegration Tests for Time Series Data
2016-09-05	episheet	Rothman's Episheet
2016-09-05	madr	Model Averaged Double Robust Estimation
2016-09-05	rrcovNA	Scalable Robust Estimators with High Breakdown Point for Incomplete Data
2016-09-04	advclust	Object Oriented Advanced Clustering
2016-09-04	evclust	Evidential Clustering
2016-09-04	RcmdrPlugin.FuzzyClust	R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means and Gustafson Kessel)
2016-09-03	misclassGLM	Computation of Generalized Linear Models with Misclassified Covariates Using Side Information
2016-09-03	musica	Multiscale Climate Model Assessment
2016-09-03	psData	Download Regularly Maintained Political Science Data Sets
2016-09-03	reutils	Talk to the NCBI EUtils
2016-09-03	ROCS	Receiver Operating Characteristics Surface
2016-09-03	spatialClust	Spatial Clustering using Fuzzy Geographically Weighted Clustering
2016-09-02	FPCA2D	Two Dimensional Functional Principal Component Analysis
2016-09-02	paleobioDB	Download and Process Data from the Paleobiology Database
2016-09-02	rminer	Data Mining Classification and Regression Methods
2016-09-02	splus2R	Supplemental S-PLUS Functionality in R
2016-09-02	treeclim	Numerical Calibration of Proxy-Climate Relationships
2016-09-01	ACSNMineR	Gene Enrichment Analysis from ACSN Maps or GMT Files
2016-09-01	earthtones	Derive a Color Palette from a Particular Location on Earth
2016-09-01	versions	Query and Install Specific Versions of Packages on CRAN
2016-08-31	fpa	Spatio-Temporal Fixation Pattern Analysis
2016-08-31	paintmap	Plotting Paintmaps
2016-08-31	rslp	A Stemming Algorithm for the Portuguese Language
2016-08-31	T2EQ	Functions for Applying the T^2-Test for Equivalence
2016-08-31	TLdating	Tools for Thermoluminescences Dating
2016-08-31	VIFCP	Detecting Change-Points via VIFCP Method
2016-08-31	xlutils3	Extract Multiple Excel Files at Once
2016-08-30	drc	Analysis of Dose-Response Curves
2016-08-30	indicspecies	Relationship Between Species and Groups of Sites
2016-08-30	naturalsort	Natural Ordering
2016-08-30	PASenseWear	Summarize Daily Physical Activity from 'SenseWear' Accelerometer Data
2016-08-30	represtools	Reproducible Research Tools
2016-08-30	RSSOP	Simulation of Supply Reservoir Systems using Standard Operation Policy
2016-08-30	sharpshootR	A Soil Survey Toolkit
2016-08-30	svmpath	The SVM Path Algorithm
2016-08-30	truncdist	Truncated Random Variables
2016-08-29	censusGeography	Changes United States Census Geographic Code into Name of Location
2016-08-29	gplm	Generalized Partial Linear Models (GPLM)
2016-08-29	harvestr	A Parallel Simulation Framework
2016-08-29	Langevin	Langevin Analysis in One and Two Dimensions
2016-08-29	MetaheuristicFPA	An Implementation of Flower Pollination Algorithm in R
2016-08-29	spate	Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach
2016-08-29	spselect	Selecting Spatial Scale of Covariates in Regression Models
2016-08-28	AHR	Estimation and Testing of Average Hazard Ratios
2016-08-28	dynpanel	Dynamic Panel Data Models
2016-08-28	intubate	Interface to Popular R Functions for Data Science Pipelines
2016-08-28	REPPlab	R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit
2016-08-28	RSKC	Robust Sparse K-Means
2016-08-28	slp	Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers
2016-08-27	digitize	Use Data from Published Plots in R
2016-08-27	edfun	Creating Empirical Distribution Functions
2016-08-27	numDeriv	Accurate Numerical Derivatives
2016-08-27	polycor	Polychoric and Polyserial Correlations
2016-08-27	Rtextrankr	TextRank for Korean
2016-08-26	dagitty	Graphical Analysis of Structural Causal Models
2016-08-26	DiffusionRgqd	Inference and Analysis for Generalized Quadratic Diffusions
2016-08-26	grr	Alternative Implementations of Base R Functions
2016-08-26	MicroDatosEs	Utilities for Official Spanish Microdata
2016-08-26	Rexperigen	R Interface to Experigen
2016-08-26	rglwidget	'rgl' in 'htmlwidgets' Framework
2016-08-26	rpnf	Point and Figure Package
2016-08-26	rtson	Typed JSON
2016-08-26	tframePlus	Time Frame Coding Kernel Extensions
2016-08-26	TSdata	'TSdbi' Illustration
2016-08-26	TSmisc	'TSdbi' Extensions to Wrap Miscellaneous Data Sources
2016-08-26	TSsdmx	'TSdbi' Extension to Connect with 'SDMX'
2016-08-25	GRAPE	Gene-Ranking Analysis of Pathway Expression
2016-08-25	parma	Portfolio Allocation and Risk Management Applications
2016-08-25	phonR	Tools for Phoneticians and Phonologists
2016-08-25	sfc	Substance Flow Computation
2016-08-24	accrued	Data Quality Visualization Tools for Partially Accruing Data
2016-08-24	dglm	Double Generalized Linear Models
2016-08-24	DiffusionRimp	Inference and Analysis for Diffusion Processes via Data Imputation and Method of Lines
2016-08-24	evidenceFactors	Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies
2016-08-24	funreg	Functional Regression for Irregularly Timed Data
2016-08-24	lfstat	Calculation of Low Flow Statistics for Daily Stream Flow Data
2016-08-24	makeFlow	Visualizing Sequential Classifications
2016-08-23	not	Narrowest-Over-Threshold Change-Point Detection
2016-08-23	swfscMisc	Miscellaneous Functions for Southwest Fisheries Science Center
2016-08-23	tm.plugin.europresse	Import Articles from 'Europresse' Using the 'tm' Text Mining Framework
2016-08-23	toxboot	Bootstrap Methods for 'ToxCast' High Throughput Screening Data
2016-08-22	liqueueR	Implements Queue, PriorityQueue and Stack Classes
2016-08-22	SSRA	Sakai Sequential Relation Analysis
2016-08-22	timelineS	Timeline and Time Duration-Related Tools
2016-08-21	bikeshare14	Bay Area Bike Share Trips in 2014
2016-08-21	PDM	Photogrammetric Distances Measurer
2016-08-21	ph2bye	Phase II Clinical Trial Design Using Bayesian Methods
2016-08-21	vows	Voxelwise Semiparametrics
2016-08-20	aemo	Download and Process AEMO Price and Demand Data
2016-08-20	ctqr	Censored and Truncated Quantile Regression
2016-08-20	datastepr	An Implementation of a SAS-Style Data Step
2016-08-20	ggghost	Capture the Spirit of Your 'ggplot2' Calls
2016-08-20	NMI	Normalized Mutual Information of Community Structure in Network
2016-08-20	predictionInterval	Prediction Interval Functions for Assessing Replication Study Results
2016-08-20	Rquake	Seismic Hypocenter Determination
2016-08-19	okcupiddata	OkCupid Profile Data for Introductory Statistics and Data Science Courses
2016-08-19	rportfolios	Random Portfolio Generation
2016-08-19	SPIAssay	A Genetic-Based Assay for the Identification of Cell Lines
2016-08-18	ucminf	General-Purpose Unconstrained Non-Linear Optimization
2016-08-17	banxicoR	Download Data from the Bank of Mexico
2016-08-17	decompr	Global-Value-Chain Decomposition
2016-08-17	ghyp	A Package on Generalized Hyperbolic Distribution and Its Special Cases
2016-08-17	gMWT	Generalized Mann-Whitney Type Tests
2016-08-17	instaR	Access to Instagram API via R
2016-08-17	opera	Online Prediction by Expert Aggregation
2016-08-17	optimr	A Replacement and Extension of the 'optim' Function
2016-08-17	rpinterest	Access Pinterest API
2016-08-17	rr	Statistical Methods for the Randomized Response Technique
2016-08-17	RRate	Estimating Replication Rate for Genome-Wide Association Studies
2016-08-16	caschrono	Séries Temporelles Avec R
2016-08-16	DiffusionRjgqd	Inference and Analysis for Jump Generalized Quadratic Diffusions
2016-08-16	neuralnet	Training of Neural Networks
2016-08-16	Rfit	Rank Estimation for Linear Models
2016-08-16	wand	Retrieve 'Magic' Attributes from Files and Directories
2016-08-15	conclust	Pairwise Constraints Clustering
2016-08-15	mp	Multidimensional Projection Techniques
2016-08-13	AcrossTic	A Cost-Minimal Regular Spanning Subgraph with TreeClust
2016-08-13	BurStMisc	Burns Statistics Miscellaneous
2016-08-13	ggThemeAssist	Add-in to Customize 'ggplot2' Themes
2016-08-13	wordspace	Distributional Semantic Models in R
2016-08-12	binsmooth	Generate PDFs and CDFs from Binned Data
2016-08-12	bundesligR	All Final Tables of the Bundesliga
2016-08-12	GlobalFit	Bi-Level Optimization of Metabolic Network Models
2016-08-12	listless	Convert Lists to Tidy Data Frames
2016-08-12	mixexp	Design and Analysis of Mixture Experiments
2016-08-12	MultiGHQuad	Multidimensional Gauss-Hermite Quadrature
2016-08-12	rich	Computes and Compares Species Richnesses
2016-08-11	estatapi	R Interface to e-Stat API
2016-08-11	InformativeCensoring	Multiple Imputation for Informative Censoring
2016-08-11	NISTunits	Fundamental Physical Constants and Unit Conversions from NIST
2016-08-11	segmag	Determine Event Boundaries in Event Segmentation Experiments
2016-08-11	StagedChoiceSplineMix	Mixture of Two-Stage Logistic Regressions with Fixed Candidate Knots
2016-08-11	TestDataImputation	Missing Item Responses Imputation for Test and Assessment Data
2016-08-10	bgmfiles	Example BGM Files for the Atlantis Ecosystem Model
2016-08-10	ggpolypath	Polygons with Holes for the Grammar of Graphics
2016-08-10	machQA	QA Machina Indicators
2016-08-09	GLMMRR	Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data
2016-08-09	ie2misc	Irucka Embry's Miscellaneous USGS Functions
2016-08-09	MWLasso	Penalized Moving-Window Lasso Method for Genome-Wide Association Studies
2016-08-09	ssmn	Skew Scale Mixtures of Normal Distributions
2016-08-09	vaersNDvax	Non-Domestic Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present
2016-08-09	vaersvax	US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present
2016-08-08	blkbox	Data Exploration with Multiple Machine Learning Algorithms
2016-08-08	CoImp	Copula Based Imputation Method
2016-08-08	EnvNicheR	Niche Estimation
2016-08-08	midasr	Mixed Data Sampling Regression
2016-08-08	optextras	Tools to Support Optimization Possibly with Bounds and Masks
2016-08-08	sna	Tools for Social Network Analysis
2016-08-07	Rtauchen	Discretization of AR(1) Processes
2016-08-06	betareg	Beta Regression
2016-08-06	dynlm	Dynamic Linear Regression
2016-08-06	MLCIRTwithin	Latent Class Item Response Theory (LC-IRT) Models under Within-Item Multidimensionality
2016-08-05	formattable	Create 'Formattable' Data Structures
2016-08-05	gem	File Conversion for 'Gem Infrasound Logger'
2016-08-05	RcppStreams	'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing
2016-08-05	uaparserjs	Parse Browser 'User-Agent' Strings into Data Frames
2016-08-04	belex	Download Historical Data from the Belgrade Stock Exchange
2016-08-04	ClimClass	Climate Classification According to Several Indices
2016-08-04	CorrMixed	Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
2016-08-04	frmhet	Regression Analysis of Fractional Responses Under Unobserved Heterogeneity
2016-08-04	GEEaSPU	Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)
2016-08-04	geneNetBP	Belief Propagation in Genotype-Phenotype Networks
2016-08-04	metaplotr	Creates CrossHairs Plots for Meta-Analyses
2016-08-04	multilevel	Multilevel Functions
2016-08-04	rasterKernelEstimates	Kernel Based Estimates on in-Memory Raster Images
2016-08-04	rmsfact	Amazing Random Facts About the World's Greatest Hacker
2016-08-04	SeqAlloc	Sequential Allocation for Prospective Experiments
2016-08-04	triebeard	'Radix' Trees in 'Rcpp'
2016-08-03	frmpd	Regression Analysis of Panel Fractional Responses
2016-08-03	gaussfacts	The Greatest Mathematician Since Antiquity
2016-08-03	npmr	Nuclear Penalized Multinomial Regression
2016-08-03	resumer	Build Resumes with R
2016-08-03	simplexreg	Regression Analysis of Proportional Data Using Simplex Distribution
2016-08-02	hdpca	Principal Component Analysis in High-Dimensional Data
2016-08-02	lmPerm	Permutation Tests for Linear Models
2016-08-02	rstack	Stack Data Type as an 'R6' Class
2016-08-02	rversions	Query 'R' Versions, Including 'r-release' and 'r-oldrel'
2016-08-01	AntAngioCOOL	Anti-Angiogenic Peptide Prediction
2016-08-01	binford	Binford's Hunter-Gatherer Data
2016-08-01	denovolyzeR	Statistical Analyses of De Novo Genetic Variants
2016-08-01	hyper.fit	Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter
2016-08-01	IndTestPP	Tests of Independence Between Point Processes in Time
2016-08-01	RcppGetconf	'Rcpp' Interface for Querying System Configuration Variables
2016-08-01	ttbbeer	US Beer Statistics from TTB
2016-07-31	KSD	Goodness-of-Fit Tests using Kernelized Stein Discrepancy
2016-07-31	proccalibrad	Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT
2016-07-30	BetaBit	Mini Games from Adventures of Beta and Bit
2016-07-30	RCMIP5	Tools for Manipulating and Summarizing CMIP5 Data
2016-07-30	TCGAretriever	Retrieve Genomic and Clinical Data from TCGA
2016-07-30	time2event	Survival and Competing Risk Analyses with Time-to-Event Data as Covariates
2016-07-30	WPC	Weighted Predictiveness Curve
2016-07-29	AhoCorasickTrie	Fast Searching for Multiple Keywords in Multiple Texts
2016-07-29	deconstructSigs	Identifies Signatures Present in a Tumor Sample
2016-07-29	FinCal	Time Value of Money, Time Series Analysis and Computational Finance
2016-07-29	microcontax	The ConTax Data Package
2016-07-29	noise	Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data
2016-07-29	presens	Interface for PreSens Fiber Optic Data
2016-07-29	Rankcluster	Model-Based Clustering for Multivariate Partial Ranking Data
2016-07-29	sbrl	Scalable Bayesian Rule Lists Model
2016-07-29	SPreFuGED	Selecting a Predictive Function for a Given Gene Expression Data
2016-07-28	files	Effective File Navigation from the R Console
2016-07-28	orca	Computation of Graphlet Orbit Counts in Sparse Graphs
2016-07-28	placement	Tools for Accessing the Google Maps API
2016-07-28	sybilDynFBA	Dynamic FBA : Dynamic Flux Balance Analysis
2016-07-28	vines	Multivariate Dependence Modeling with Vines
2016-07-27	birk	MA Birk's Functions
2016-07-27	cellranger	Translate Spreadsheet Cell Ranges to Rows and Columns
2016-07-27	EvaluationMeasures	Collection of Model Evaluation Measure Functions
2016-07-27	iDOS	Integrated Discovery of Oncogenic Signatures
2016-07-27	JAGUAR	Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)
2016-07-27	palr	Colour Palettes for Data
2016-07-27	RecordLinkage	Record Linkage in R
2016-07-27	sEparaTe	Maximum Likelihood Estimation and Likelihood Ratio Test Functions for Separable Variance-Covariance Structures
2016-07-27	SimSCRPiecewise	'Simulates Univariate and Semi-Competing Risks Data Given Covariates and Piecewise Exponential Baseline Hazards'
2016-07-27	SNPMClust	Bivariate Gaussian Genotype Clustering and Calling for Illumina Microarrays
2016-07-27	StableEstim	Estimate the Four Parameters of Stable Laws using Different Methods
2016-07-26	AmostraBrasil	Generates Samples or Complete List of Brazilian IBGE (Instituto Brasileiro De Geografia e Estatistica) Census Households, Geocoding it by Google Maps
2016-07-26	denoiseR	Regularized Low Rank Matrix Estimation
2016-07-26	jacpop	Jaccard Index for Population Structure Identification
2016-07-26	LARF	Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects
2016-07-26	lightsout	Implementation of the 'Lights Out' Puzzle Game
2016-07-26	MonoPhy	Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups in a Phylogeny
2016-07-26	preprosim	Lightweight Data Quality Simulation for Classification
2016-07-26	random.polychor.pa	A Parallel Analysis with Polychoric Correlation Matrices
2016-07-26	SizeEstimation	Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model
2016-07-25	bigReg	Generalized Linear Models (GLM) for Large Data Sets
2016-07-25	HK80	Conversion Tools for HK80 Geographical Coordinate System
2016-07-25	longpower	Sample Size Calculations for Longitudinal Data
2016-07-25	runjags	Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS
2016-07-24	GameTheoryAllocation	Tools for Calculating Allocations in Game Theory
2016-07-24	lmenssp	Linear Mixed Effects Models with Non-Stationary Stochastic Processes
2016-07-24	mcparallelDo	A Simplified Interface for Running Commands on Parallel Processes
2016-07-24	mod09nrt	Extraction of Bands from MODIS Surface Reflectance Product MOD09 NRT
2016-07-24	qat	Quality Assurance Toolkit
2016-07-24	RSVGTipsDevice	An R SVG Graphics Device with Dynamic Tips and Hyperlinks
2016-07-24	ssa	Simultaneous Signal Analysis
2016-07-24	stmCorrViz	A Tool for Structural Topic Model Visualizations
2016-07-23	fastSOM	Fast Calculation of Spillover Measures
2016-07-23	pullword	R Interface to Pullword Service
2016-07-23	track	Store Objects on Disk Automatically
2016-07-22	DIFboost	Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
2016-07-22	ggvis	Interactive Grammar of Graphics
2016-07-22	Holidays	Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
2016-07-22	icdGLM	EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models
2016-07-22	iemiscdata	Irucka Embry's Miscellaneous Data Collection
2016-07-22	IPtoCountry	Convert IP Addresses to Country Names or Full Location with Geoplotting
2016-07-22	optDesignSlopeInt	Optimal Designs for Estimating the Slope Divided by the Intercept
2016-07-22	scriptests	Transcript-Based Unit Tests that are Easy to Create and Maintain
2016-07-22	StratifiedBalancing	Performs Stratified Covariate Balancing for Data with Discrete and Continuous Outcome Variables
2016-07-22	TimeWarp	Date Calculations and Manipulation
2016-07-21	abind	Combine Multidimensional Arrays
2016-07-21	clinsig	Clinical Significance Functions
2016-07-21	TripleR	Social Relation Model (SRM) Analyses for Single or Multiple Groups
2016-07-20	ChIPtest	Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data
2016-07-20	docxtractr	Extract Data Tables and Comments from Microsoft Word Documents
2016-07-20	mvQuad	Methods for Multivariate Quadrature
2016-07-20	qcr	Quality Control Review
2016-07-20	rstatscn	R Interface for China National Data
2016-07-20	scientoText	Text & Scientometric Analytics
2016-07-20	slackr	Send Messages, Images, R Objects and Files to 'Slack' Channels/Users
2016-07-19	RForcecom	Data Integration Feature for Force.com and Salesforce.com
2016-07-18	BoardGames	Board Games and Tools for Building Board Games
2016-07-18	DWreg	Parametric Regression for Discrete Response
2016-07-18	iRegression	Regression Methods for Interval-Valued Variables
2016-07-18	SecKW	The SecKW Distribution
2016-07-18	SinIW	The SinIW Distribution
2016-07-17	CosW	The CosW Distribution
2016-07-17	heuristica	Heuristics Including Take the Best and Unit-Weight Linear
2016-07-17	precintcon	Precipitation Intensity, Concentration and Anomaly Analysis
2016-07-17	TanB	The TanB Distribution
2016-07-16	ACDm	Tools for Autoregressive Conditional Duration Models
2016-07-16	EconDemand	General Analysis of Various Economics Demand Systems
2016-07-16	MRMR	Multivariate Regression Models for Reserving
2016-07-16	QVM	Questionnaires Validation Module
2016-07-16	sbfc	Selective Bayesian Forest Classifier
2016-07-15	easyformatr	Tools for Building R Formats
2016-07-15	lmeresampler	Bootstrap Methods for Nested Linear Mixed-Effects Models
2016-07-15	modEvA	Model Evaluation and Analysis
2016-07-15	RStripe	A Convenience Interface for the Stripe Payment API
2016-07-15	sophisthse	Load Russian Economic Indicators from the Archive of Economic and Social Data
2016-07-15	tsne	T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
2016-07-14	artfima	ARTFIMA Model Estimation
2016-07-14	logcondens	Estimate a Log-Concave Probability Density from Iid Observations
2016-07-14	matrixLaplacian	Normalized Laplacian Matrix and Laplacian Map
2016-07-14	MCMC4Extremes	Posterior Distribution of Extreme Value Models in R
2016-07-14	midrangeMCP	Multiple Comparisons Procedures Based on Studentized Midrange and Range Distributions
2016-07-14	mlma	Multilevel Mediation Analysis
2016-07-14	Peacock.test	Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests
2016-07-14	rDNAse	Generating Various Numerical Representation Schemes of DNA Sequences
2016-07-13	monographaR	Taxonomic Monographs Tools
2016-07-13	rcicr	Reverse-Correlation Image-Classification Toolbox
2016-07-13	SDEFSR	Subgroup Discovery with Evolutionary Fuzzy Systems in R
2016-07-13	smoothtail	Smooth Estimation of GPD Shape Parameter
2016-07-12	install.load	Check, Install and Load CRAN & USGS GRAN Packages
2016-07-12	lmem.qtler	Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis
2016-07-12	simulator	An Engine for Running Simulations
2016-07-11	ezsummary	Generate Data Summary in a Tidy Format
2016-07-11	gnmf	Generalized Non-negative Matrix Factorization Based on Renyi Divergence
2016-07-11	Homeric	Doughnut Plots
2016-07-11	rmdHelpers	Helper Functions for Rmd Documents
2016-07-10	CIFsmry	Weighted summary of cumulative incidence functions
2016-07-10	crskdiag	Diagnostics for Fine and Gray Model
2016-07-10	futile.logger	A Logging Utility for R
2016-07-10	SAMM	Some Algorithms for Mixed Models
2016-07-10	tempdisagg	Methods for Temporal Disaggregation and Interpolation of Time Series
2016-07-09	gwdegree	A Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models
2016-07-09	preproviz	Tools for Visualization of Interdependent Data Quality Issues
2016-07-08	DCchoice	Analyzing Dichotomous Choice Contingent Valuation Data
2016-07-08	STB	Simultaneous Tolerance Bounds
2016-07-07	changepoint.np	Methods for Nonparametric Changepoint Detection
2016-07-07	fastGraph	Fast Drawing and Shading of Graphs of Statistical Distributions
2016-07-07	geotopbricks	An R Plug-in for the Distributed Hydrological Model GEOtop
2016-07-07	mime	Map Filenames to MIME Types
2016-07-07	RCriteo	Loading Criteo Data into R
2016-07-07	Rtnmin	Truncated Newton Function Minimization with Bounds Constraints
2016-07-07	SpectralMap	Diffusion Map and Spectral Map
2016-07-07	vietnamcode	Convert Vietnam Provincial Codes
2016-07-06	BayesTree	Bayesian Additive Regression Trees
2016-07-06	EXRQ	Extreme Regression of Quantiles
2016-07-06	linear.tools	Manipulate Formulas and Evaluate Marginal Effects
2016-07-06	MLPUGS	Multi-Label Prediction Using Gibbs Sampling (and Classifier Chains)
2016-07-06	som	Self-Organizing Map
2016-07-05	genomicper	Circular Genomic Permutation using Gwas p-Values of Association
2016-07-05	PACBO	Clustering Online Datasets
2016-07-04	batchmeans	Consistent Batch Means Estimation of Monte Carlo Standard Errors
2016-07-04	BayesTreePrior	Bayesian Tree Prior Simulation
2016-07-04	Cite	An RStudio Addin to Insert BibTex Citation in Rmarkdown Documents
2016-07-04	csp	Correlates of State Policy Data Set in R
2016-07-04	DAMisc	Dave Armstrong's Miscellaneous Functions
2016-07-04	etrunct	Computes Moments of Univariate Truncated t Distribution
2016-07-04	gramEvol	Grammatical Evolution for R
2016-07-04	pfa	Estimates False Discovery Proportion Under Arbitrary Covariance Dependence
2016-07-04	Renext	Renewal Method for Extreme Values Extrapolation
2016-07-04	RenextGUI	GUI for Renext
2016-07-03	badgecreatr	Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme
2016-07-03	ModelMap	Modeling and Map Production using Random Forest and Stochastic Gradient Boosting
2016-07-03	wfindr	Crossword, Scrabble and Anagram Solver
2016-07-02	fmrs	Variable Selection in Finite Mixture of AFT Regression and FMR
2016-07-02	InspectChangepoint	High-Dimensional Changepoint Estimation via Sparse Projection
2016-07-02	isingLenzMC	Monte Carlo for Classical Ising Model
2016-07-02	modygliani	MOlecular DYnamics GLobal ANalysis
2016-07-02	productplots	Product Plots for R
2016-07-02	QCSimulator	A 5-Qubit Quantum Computing Simulator
2016-07-02	randNames	Package Provides Access to Fake User Data
2016-07-01	Comp2ROC	Compare Two ROC Curves that Intersect
2016-07-01	hypothesisr	Wrapper for the 'Hypothes.is' Web Annotation Service
2016-07-01	rccdates	Date Functions for Swedish Cancer Data
2016-07-01	RcmdrPlugin.EcoVirtual	Rcmdr EcoVirtual Plugin
2016-06-30	BootWPTOS	Test Stationarity using Bootstrap Wavelet Packet Tests
2016-06-30	metaheur	Metaheuristic Optimization Framework for Preprocessing Combinations
2016-06-30	mise	Clears the Workspace (Mise en Place)
2016-06-30	Segmentor3IsBack	A Fast Segmentation Algorithm
2016-06-30	wgaim	Whole Genome Average Interval Mapping for QTL Detection using Mixed Models
2016-06-29	correctedAUC	Correcting AUC for Measurement Error
2016-06-29	CP	Conditional Power Calculations
2016-06-29	DrillR	R Driver for Apache Drill
2016-06-29	EcoVirtual	Simulation of Ecological Models
2016-06-29	kernscr	Kernel Machine Score Test for Semi-Competing Risks
2016-06-29	POET	Principal Orthogonal ComplEment Thresholding (POET) Method
2016-06-29	survSNP	Power Calculations for SNP Studies with Censored Outcomes
2016-06-29	UNCLES	Unification of Clustering Results from Multiple Datasets using External Specifications
2016-06-29	vmsbase	GUI Tools to Process, Analyze and Plot Fisheries Data
2016-06-28	ggmcmc	Tools for Analyzing MCMC Simulations from Bayesian Inference
2016-06-28	pGMGM	Estimating Multiple Gaussian Graphical Models (GGM) in Penalized Gaussian Mixture Models (GMM)
2016-06-28	rankFD	Rank-Based Tests for General Factorial Designs
2016-06-27	IntegrateBs	Integration for B-Spline
2016-06-27	ldamatch	Selection of Statistically Similar Research Groups
2016-06-27	meteR	Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
2016-06-27	SeqMADE	Network Module-Based Model in the Differential Expression Analysis for RNA-Seq
2016-06-26	couchDB	Connect to and Work with CouchDB Databases
2016-06-26	preprocomb	Tools for Preprocessing Combinations
2016-06-25	BACCT	Bayesian Augmented Control for Clinical Trials
2016-06-24	NoiseFiltersR	Label Noise Filters for Data Preprocessing in Classification
2016-06-23	babel	Ribosome Profiling Data Analysis
2016-06-23	boa	Bayesian Output Analysis Program (BOA) for MCMC
2016-06-23	factorplot	Graphical Presentation of Simple Contrasts
2016-06-23	GAabbreviate	Abbreviating Items Measures using Genetic Algorithms
2016-06-23	LakeMetabolizer	Tools for the Analysis of Ecosystem Metabolism
2016-06-23	LindleyR	The Lindley Distribution and Its Modifications
2016-06-23	mscstexta4r	R Client for the Microsoft Cognitive Services Text Analytics REST API
2016-06-23	R2HTML	HTML Exportation for R Objects
2016-06-23	RMThreshold	Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis
2016-06-23	shinyDND	Shiny Drag-n-Drop
2016-06-22	pearson7	Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2
2016-06-22	rwty	R We There Yet? Visualizing MCMC Convergence in Phylogenetics
2016-06-21	fbroc	Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves
2016-06-21	REPTILE	Regulatory DNA Element Prediction
2016-06-20	squid	Statistical Quantification of Individual Differences
2016-06-18	OUwie	Analysis of Evolutionary Rates in an OU Framework
2016-06-18	xmlparsedata	Parse Data of 'R' Code as an 'XML' Tree
2016-06-17	AGSDest	Estimation in Adaptive Group Sequential Trials
2016-06-17	compete	Analyzing Social Hierarchies
2016-06-17	DoTC	Distribution of Typicality Coefficients
2016-06-17	PATHChange	A Tool for Identification of Differentially Expressed Pathways using Multi-Statistic Comparison
2016-06-17	rvest	Easily Harvest (Scrape) Web Pages
2016-06-16	gmDatabase	Accessing a Geometallurgical Database with R
2016-06-16	netgsa	Network-Based Gene Set Analysis
2016-06-16	Rphylopars	Phylogenetic Comparative Tools for Missing Data and Within-Species Variation
2016-06-16	SPIGA	Compute SPI Index using the Methods Genetic Algorithm and Maximum Likelihood
2016-06-15	cssTools	Cognitive Social Structure Tools
2016-06-15	IsotopeR	Stable Isotope Mixing Model
2016-06-15	mscsweblm4r	R Client for the Microsoft Cognitive Services Web Language Model REST API
2016-06-15	Sleuth2	Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)"
2016-06-15	Sleuth3	Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)"
2016-06-14	bpcp	Beta Product Confidence Procedure for Right Censored Data
2016-06-14	cointmonitoR	Consistent Monitoring of Stationarity and Cointegrating Relationships
2016-06-14	cointReg	Parameter Estimation and Inference in a Cointegrating Regression
2016-06-14	perccal	Implementing Double Bootstrap Linear Regression Confidence Intervals Using the 'perc-cal' Method
2016-06-14	TEEReg	Trimmed Elemental Estimation for Linear Models
2016-06-13	jsonvalidate	Validate 'JSON'
2016-06-12	AUtests	Approximate Unconditional and Permutation Tests
2016-06-12	engsoccerdata	English and European Soccer Results 1871-2016
2016-06-12	quadmesh	Quadrangle Mesh
2016-06-12	Rcplex	R Interface to CPLEX
2016-06-11	HDDesign	Sample Size Calculation for High Dimensional Classification Study
2016-06-11	PARSE	Model-Based Clustering with Regularization Methods for High-Dimensional Data
2016-06-11	SDraw	Spatially Balanced Sample Draws for Spatial Objects
2016-06-10	CombinePortfolio	Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies
2016-06-10	ibm	Individual Based Models in R
2016-06-10	kehra	Collect, Assemble and Model Air Pollution, Weather and Health Data
2016-06-10	MicSim	Performing Continuous-Time Microsimulation
2016-06-10	sesem	Spatially Explicit Structural Equation Modeling
2016-06-09	cape	Combined Analysis of Pleiotropy and Epistasis
2016-06-09	cloudUtil	Cloud Utilization Plots
2016-06-09	dam	Data Analysis Metabolomics
2016-06-09	JointModel	Semiparametric Joint Models for Longitudinal and Counting Processes
2016-06-09	spaa	SPecies Association Analysis
2016-06-09	TRAMPR	'TRFLP' Analysis and Matching Package for R
2016-06-08	CARBayesdata	Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages
2016-06-08	DCG	Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis
2016-06-08	MGSDA	Multi-Group Sparse Discriminant Analysis
2016-06-08	plyr	Tools for Splitting, Applying and Combining Data
2016-06-08	Rbent	Robust Bent Line Regression
2016-06-07	BaPreStoPro	Bayesian Prediction of Stochastic Processes
2016-06-07	pop	A Flexible Syntax for Population Dynamic Modelling
2016-06-07	rpn	Converter and Interpreter for Reverse Polish Notation Expressions
2016-06-07	Rsampling	Ports the Workflow of "Resampling Stats" Add-in to R
2016-06-06	bioplots	Visualization of Overlapping Results with Heatmap
2016-06-06	DAKS	Data Analysis and Knowledge Spaces
2016-06-06	DisimForMixed	Calculate Dissimilarity Matrix for Dataset with Mixed Attributes
2016-06-06	enviPick	Peak Picking for High Resolution Mass Spectrometry Data
2016-06-06	fechner	Fechnerian Scaling of Discrete Object Sets
2016-06-06	heatmapFit	Fit Statistic for Binary Dependent Variable Models
2016-06-06	muckrock	Data on Freedom of Information Act Requests
2016-06-06	PreKnitPostHTMLRender	Pre-Knitting Processing and Post HTML-Rendering Processing
2016-06-06	RClone	Partially Clonal Populations Analysis
2016-06-06	shinytoastr	Notifications from 'Shiny'
2016-06-06	uniReg	Unimodal Penalized Spline Regression using B-Splines
2016-06-04	iGasso	Statistical Tests and Utilities for Genetic Association
2016-06-04	ROpenFIGI	R Interface to OpenFIGI
2016-06-03	bapred	Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data)
2016-06-03	clikcorr	Censoring Data and Likelihood-Based Correlation Estimation
2016-06-03	flars	Functional LARS
2016-06-03	hkex.api	API to Retrieve Data from Hong Kong Stock Exchange
2016-06-03	wpp2015	World Population Prospects 2015
2016-06-02	bastah	Big Data Statistical Analysis for High-Dimensional Models
2016-06-02	Dark	The Analysis of Dark Adaptation Data
2016-06-02	gWidgets2tcltk	Toolkit Implementation of gWidgets2 for tcltk
2016-06-02	pkgcopier	Copy Local R Packages to Another Environment
2016-06-01	gWidgets2	Rewrite of gWidgets API for Simplified GUI Construction
2016-06-01	MSQC	Multivariate Statistical Quality Control
2016-06-01	sybilcycleFreeFlux	Cycle-Free Flux Balance Analysis
2016-05-31	BHH2	Useful Functions for Box, Hunter and Hunter II
2016-05-31	Fahrmeir	Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
2016-05-31	HandTill2001	Multiple Class Area under ROC Curve
2016-05-31	maSAE	Mandallaz' Model-Assisted Small Area Estimators
2016-05-31	PolyTrend	Trend Classification Algorithm
2016-05-30	ClustMMDD	Variable Selection in Clustering by Mixture Models for Discrete Data
2016-05-30	DODR	Detection of Differential Rhythmicity
2016-05-29	qrmdata	Data Sets for Quantitative Risk Management Practice
2016-05-28	arrayhelpers	Convenience Functions for Arrays
2016-05-28	cocor	Comparing Correlations
2016-05-28	softclassval	Soft Classification Performance Measures
2016-05-27	GK2011	Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
2016-05-26	CHFF	Closest History Flow Field Forecasting for Bivariate Time Series
2016-05-26	Davies	The Davies Quantile Function
2016-05-26	ddst	Data Driven Smooth Tests
2016-05-26	fakeR	Simulates Data from a Data Frame of Different Variable Types
2016-05-26	forecTheta	Forecasting Time Series by Theta Models
2016-05-26	HTSCluster	Clustering High-Throughput Transcriptome Sequencing (HTS) Data
2016-05-26	replicationInterval	Replication Interval Functions
2016-05-26	spfrontier	Spatial Stochastic Frontier Models
2016-05-25	kantorovich	Kantorovich Distance Between Probability Measures
2016-05-25	rSARP	Functions to Create and Evaluate Search and Rescue Plans
2016-05-24	bayesbio	Miscellaneous Functions for Bioinformatics and Bayesian Statistics
2016-05-24	bitrugs	Bayesian Inference of Transmission Routes Using Genome Sequences
2016-05-24	ChangepointTesting	Change Point Estimation for Clustered Signals
2016-05-24	GiniWegNeg	Computing the Gini-Based Coefficients for Weighted and Negative Attributes
2016-05-24	uskewFactors	Model-Based Clustering via Mixtures of Unrestricted Skew-t Sactor Analyzer Models
2016-05-23	asd	Simulations for Adaptive Seamless Designs
2016-05-23	MFAg	Multiple Factor Analysis (MFA)
2016-05-23	OptimaRegion	Confidence Regions for Optima
2016-05-22	prof.tree	An Alternative Display Profiling Data as Tree Structure
2016-05-22	VDAP	Peptide Array Analysis Tools
2016-05-21	ifultools	Insightful Research Tools
2016-05-21	sapa	Spectral Analysis for Physical Applications
2016-05-20	AdequacyModel	Adequacy of Probabilistic Models and General Purpose Optimization
2016-05-20	crtests	Classification and Regression Tests
2016-05-20	MonoInc	Monotonic Increasing
2016-05-19	coenocliner	Coenocline Simulation
2016-05-19	CUSUMdesign	Compute Decision Interval and Average Run Length for CUSUM Charts
2016-05-19	LSPFP	Lysate and Secretome Peptide Feature Plotter
2016-05-19	MetProc	Separate Metabolites into Likely Measurement Artifacts and True Metabolites
2016-05-19	weathermetrics	Functions to Convert Between Weather Metrics
2016-05-18	BaM	Functions and Datasets for Books by Jeff Gill
2016-05-18	gamlss.mx	Fitting Mixture Distributions with GAMLSS
2016-05-18	gamlss.util	GAMLSS Utilities
2016-05-18	hht	The Hilbert-Huang Transform: Tools and Methods
2016-05-18	saasCNV	Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data
2016-05-17	RAppArmor	Bindings to AppArmor and Security Related Linux Tools
2016-05-17	robustloggamma	Robust Estimation of the Generalized log Gamma Model
2016-05-17	ThreeArmedTrials	Design and Analysis of Clinical Non-Inferiority or Superiority Trials with Active and Placebo Control
2016-05-16	addhaz	Binomial and Multinomial Additive Hazards Models
2016-05-16	clusterhap	Clustering Genotypes in Haplotypes
2016-05-16	cp4p	Calibration Plot for Proteomics
2016-05-16	pRSR	Test of Periodicity using Response Surface Regression
2016-05-16	SimplicialCubature	Integration of Functions Over Simplices
2016-05-15	cystiSim	Agent-Based Model for Taenia_solium Transmission and Control
2016-05-15	ExomeDepth	Calls Copy Number Variants from Targeted Sequence Data
2016-05-15	Ryacas	R Interface to the Yacas Computer Algebra System
2016-05-14	equivalence	Provides Tests and Graphics for Assessing Tests of Equivalence
2016-05-14	lrmest	Different Types of Estimators to Deal with Multicollinearity
2016-05-14	rollbar	Error Tracking and Logging
2016-05-14	SSL	Semi-Supervised Learning
2016-05-13	ada	The R Package Ada for Stochastic Boosting
2016-05-13	DengueRT	Parameter Estimates and Real-Time Prediction of a Single Dengue Outbreak
2016-05-13	HMVD	Group Association Test using a Hidden Markov Model
2016-05-13	jaatha	Simulation-Based Maximum Likelihood Parameter Estimation
2016-05-13	MLmetrics	Machine Learning Evaluation Metrics
2016-05-13	RFormatter	R Source Code Formatter
2016-05-13	rjstat	Read and Write 'JSON-stat' Data Sets
2016-05-12	march	Markov Chains
2016-05-11	genderizeR	Gender Prediction Based on First Names
2016-05-11	lambda.tools	Tools for Modeling Data with Functional Programming
2016-05-11	SetRank	Advanced Gene Set Enrichment Analysis
2016-05-11	sigora	Signature Overrepresentation Analysis
2016-05-10	assertive.datetimes	Assertions to Check Properties of Dates and Times
2016-05-10	assertive.files	Assertions to Check Properties of Files
2016-05-10	assertive.strings	Assertions to Check Properties of Strings
2016-05-10	base64	Base64 Encoder and Decoder
2016-05-10	CircNNTSR	Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models
2016-05-10	FeedbackTS	Analysis of Feedback in Time Series
2016-05-10	osc	Orthodromic Spatial Clustering
2016-05-10	rankhazard	Rank-Hazard Plots
2016-05-10	RcmdrPlugin.RMTCJags	R MTC Jags 'Rcmdr' Plugin
2016-05-10	subdetect	Detect Subgroup with an Enhanced Treatment Effect
2016-05-09	assertive.numbers	Assertions to Check Properties of Numbers
2016-05-09	olctools	Open Location Code Handling in R
2016-05-09	sdnet	Soft-Discretization-Based Bayesian Network Inference
2016-05-08	concatenate	Human-Friendly Text from Unknown Strings
2016-05-08	Ecfun	Functions for Ecdat
2016-05-07	geozoo	Zoo of Geometric Objects
2016-05-07	nasadata	Interface to Various NASA API's
2016-05-07	PenCoxFrail	Regularization in Cox Frailty Models
2016-05-05	multiwayvcov	Multi-Way Standard Error Clustering
2016-05-05	sld	Estimation and Use of the Quantile-Based Skew Logistic Distribution
2016-05-04	surveybootstrap	Tools for the Bootstrap with Survey Data
2016-05-03	ASSISTant	Adaptive Subgroup Selection in Group Sequential Trials
2016-05-03	qmap	Statistical Transformations for Post-Processing Climate Model Output
2016-05-03	recommenderlabJester	Jester Dataset for 'recommenderlab'
2016-05-03	SCI	Standardized Climate Indices Such as SPI, SRI or SPEI
2016-05-02	imputePSF	Impute Missing Data in Time Series Data with PSF Based Method
2016-05-02	netcoh	Statistical Modeling with Network Cohesion
2016-05-02	rasclass	Supervised Raster Image Classification
2016-05-02	shuffle	The Shuffle Estimator for Explainable Variance
2016-05-02	TippingPoint	Enhanced Tipping Point Displays the Results of Sensitivity Analyses for Missing Data
2016-05-01	DiscreteInverseWeibull	Discrete Inverse Weibull Distribution
2016-05-01	DiscreteLaplace	Discrete Laplace Distributions
2016-05-01	hetmeta	Heterogeneity Measures in Meta-Analysis
2016-05-01	ljr	Logistic Joinpoint Regression
2016-05-01	lvplot	Letter Value 'Boxplots'
2016-05-01	StressStrength	Computation and Estimation of Reliability of Stress-Strength Models
2016-04-30	IAT	Cleaning and Visualizing Implicit Association Test (IAT) Data
2016-04-30	plac	A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data
2016-04-29	ClusteredMutations	Location and Visualization of Clustered Somatic Mutations
2016-04-29	fastclime	A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector
2016-04-29	googleformr	Collect Data Programmatically by POST Methods to Google Forms
2016-04-28	CalibrateSSB	Weighting and Estimation for Panel Data with Non-Response
2016-04-28	ClusterRankTest	Rank Tests for Clustered Data
2016-04-27	CDROM	Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data
2016-04-27	CopyDetect	Computing Statistical Indices to Detect Answer Copying on Multiple-Choice Tests
2016-04-27	ggdendro	Create Dendrograms and Tree Diagrams Using 'ggplot2'
2016-04-27	NAEPprimer	The NAEP Primer
2016-04-27	pandocfilters	Pandoc Filters for R
2016-04-26	crsnls	Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe'
2016-04-26	nat.nblast	NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron Similarity and Clustering
2016-04-26	REREFACT	Reordering and/or Reflecting Factors for Simulation Studies with Exploratory Factor Analysis
2016-04-26	RZabbix	R Module for Working with the 'Zabbix API'
2016-04-26	VecStatGraphs2D	Vector Analysis using Graphical and Analytical Methods in 2D
2016-04-25	beeswarm	The Bee Swarm Plot, an Alternative to Stripchart
2016-04-25	FinCovRegularization	Covariance Matrix Estimation and Regularization for Finance
2016-04-25	genomeplot	'Plot genome wide values for all chromosomes'
2016-04-25	MissingDataGUI	A GUI for Missing Data Exploration
2016-04-25	Rcsdp	R Interface to the CSDP Semidefinite Programming Library
2016-04-24	humaniformat	A Parser for Human Names
2016-04-24	mlmc	Multi-Level Monte Carlo
2016-04-24	Rdsdp	R Interface to DSDP Semidefinite Programming Library
2016-04-24	TELP	Social Representation Theory Application: The Free Evocation of Words Technique
2016-04-23	distrTeach	Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School
2016-04-23	DrugClust	Implementation of a Machine Learning Framework for Predicting Drugs Side Effects
2016-04-23	fdaPDE	Functional Data Analysis and Partial Differential Equations; Statistical Analysis of Functional and Spatial Data, Based on Regression with Partial Differential Regularizations
2016-04-23	IncucyteDRC	Dose Response Curves from Incucyte Proliferation Assays
2016-04-23	MeanShift	Clustering via the Mean Shift Algorithm
2016-04-22	aimPlot	Create Pie Like Plot for Completeness
2016-04-22	bridgedist	An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003)
2016-04-22	edf	Read Data from European Data Format (EDF and EDF+) Files
2016-04-22	hextri	Hexbin Plots with Triangles
2016-04-22	uHMM	Construct an Unsupervised Hidden Markov Model
2016-04-22	xkcdcolors	Color Names from the XKCD Color Survey
2016-04-21	EEM	Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data
2016-04-21	eyelinker	Load Raw Data from Eyelink Eye Trackers
2016-04-21	falcon	Finding Allele-Specific Copy Number in Next-Generation Sequencing Data
2016-04-21	rematch	Match Regular Expressions with a Nicer 'API'
2016-04-20	biotic	Calculation of Freshwater Biotic Indices
2016-04-20	rnpn	Interface to the National 'Phenology' Network 'API'
2016-04-19	capushe	CAlibrating Penalities Using Slope HEuristics
2016-04-19	clpAPI	R Interface to C API of COIN-OR Clp
2016-04-19	CountsEPPM	Mean and Variance Modeling of Count Data
2016-04-19	DidacticBoost	A Simple Implementation and Demonstration of Gradient Boosting
2016-04-19	disparityfilter	Disparity Filter Algorithm for Weighted Networks
2016-04-19	eba	Elimination-by-Aspects Models
2016-04-19	envlpaster	Enveloping the Aster Model
2016-04-19	flowr	Streamlining Design and Deployment of Complex Workflows
2016-04-19	funr	Simple Utility Providing Terminal Access to all R Functions
2016-04-19	multipleNCC	Weighted Cox-Regression for Nested Case-Control Data
2016-04-19	nbpMatching	Functions for Optimal Non-Bipartite Matching
2016-04-19	NlsyLinks	Utilities and Kinship Information for Research with the NLSY
2016-04-19	params	Simplify Parameters
2016-04-19	pks	Probabilistic Knowledge Structures
2016-04-19	prototest	Inference on Prototypes from Clusters of Features
2016-04-19	refnr	Refining Data Table Using a Set of Formulas
2016-04-19	StroupGLMM	R Codes and Datasets for Generalized Linear Mixed Models: Modern Concepts, Methods and Applications by Walter W. Stroup
2016-04-18	GoodmanKruskal	Association Analysis for Categorical Variables
2016-04-18	sgof	Multiple Hypothesis Testing
2016-04-16	convertGraph	Convert Graphical Files Format
2016-04-16	DOT	Render and Export DOT Graphs in R
2016-04-16	keyplayer	Locating Key Players in Social Networks
2016-04-16	solaR	Radiation and Photovoltaic Systems
2016-04-16	sprex	Calculate Species Richness and Extrapolation Metrics
2016-04-15	pact	Predictive Analysis of Clinical Trials
2016-04-15	tth	TeX to HTML/MathML Translators tth/ttm
2016-04-14	reservoir	Tools for Analysis, Design, and Operation of Water Supply Storages
2016-04-13	DataCombine	Tools for Easily Combining and Cleaning Data Sets
2016-04-13	ebGenotyping	Genotyping and SNP Detection using Next Generation Sequencing Data
2016-04-13	sde	Simulation and Inference for Stochastic Differential Equations
2016-04-13	stcov	Stein's Covariance Estimator
2016-04-12	asaur	Data Sets for "Applied Survival Analysis Using R""
2016-04-12	gencve	General Cross Validation Engine
2016-04-12	gmailr	Access the Gmail RESTful API
2016-04-12	hierarchicalSets	Set Data Visualization Using Hierarchies
2016-04-12	nlshrink	Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices
2016-04-12	progenyClust	Finding the Optimal Cluster Number Using Progeny Clustering
2016-04-12	rYoutheria	Access to the YouTheria Mammal Trait Database
2016-04-11	ELT	Experience Life Tables
2016-04-11	PolyPatEx	Paternity Exclusion in Autopolyploid Species
2016-04-10	analogueExtra	Additional Functions for Use with the Analogue Package
2016-04-10	etma	Epistasis Test in Meta-Analysis
2016-04-10	GiNA	High Throughput Phenotyping
2016-04-10	greport	Graphical Reporting for Clinical Trials
2016-04-10	mgarchBEKK	Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR) Processes
2016-04-10	Sofi	Interfaz interactiva con fines didacticos
2016-04-09	DensParcorr	Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
2016-04-09	DiallelAnalysisR	Diallel Analysis with R
2016-04-09	gds	Descriptive Statistics of Grouped Data
2016-04-09	Information	Data Exploration with Information Theory (Weight-of-Evidence and Information Value)
2016-04-09	investr	Inverse Estimation/Calibration Functions
2016-04-09	mateable	Tools to Assess Mating Potential in Space and Time
2016-04-09	rrefine	R Client for OpenRefine API
2016-04-08	biogeo	Point Data Quality Assessment and Coordinate Conversion
2016-04-08	braidReports	Visualize Combined Action Response Surfaces and Report BRAID Analyses
2016-04-08	hmm.discnp	Hidden Markov Models with Discrete Non-Parametric Observation Distributions
2016-04-08	RGA	A Google Analytics API Client
2016-04-07	AdvBinomApps	Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information
2016-04-07	hypergeo	The Gauss Hypergeometric Function
2016-04-07	MixtureInf	Inference for Finite Mixture Models
2016-04-07	msir	Model-Based Sliced Inverse Regression
2016-04-07	palettetown	Use Pokemon Inspired Colour Palettes
2016-04-06	fbRads	Analyzing and Managing Facebook Ads from R
2016-04-06	haplotyper	Tool for Clustering Genotypes in Haplotypes
2016-04-06	MixRF	A Random-Forest-Based Approach for Imputing Clustered Incomplete Data
2016-04-06	PhysActBedRest	Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
2016-04-06	pop.wolf	Models for Simulating Wolf Populations
2016-04-05	decision	Statistical Decision Analysis
2016-04-05	fromo	Fast Robust Moments
2016-04-05	gelnet	Generalized Elastic Nets
2016-04-05	MHTrajectoryR	Bayesian Model Selection in Logistic Regression for the Detection of Adverse Drug Reactions
2016-04-05	vhica	Vertical and Horizontal Inheritance Consistence Analysis
2016-04-04	argparser	Command-Line Argument Parser
2016-04-04	BayesH	Bayesian Regression Model with Mixture of Two Scaled Inverse Chi Square as Hyperprior
2016-04-04	bpa	Basic Pattern Analysis
2016-04-04	cardioModel	Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies
2016-04-04	emov	Eye Movement Analysis Package for Fixation and Saccade Detection
2016-04-04	iopsych	Methods for Industrial/Organizational Psychology
2016-04-04	iptools	Manipulate, Validate and Resolve 'IP' Addresses
2016-04-04	LexisPlotR	Plot Lexis Diagrams for Demographic Purposes
2016-04-04	pipeR	Multi-Paradigm Pipeline Implementation
2016-04-04	QPot	Quasi-Potential Analysis for Stochastic Differential Equations
2016-04-04	rlist	A Toolbox for Non-Tabular Data Manipulation
2016-04-03	cancerTiming	Estimation of Temporal Ordering of Cancer Abnormalities
2016-04-03	diskImageR	A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays
2016-04-03	mistral	Methods in Structural Reliability Analysis
2016-04-03	mvcluster	Multi-View Clustering
2016-04-03	pergola	Toolbox for Polyploid Genetic Data
2016-04-03	RevEcoR	Reverse Ecology Analysis on Microbiome
2016-04-03	rusda	Interface to USDA Databases
2016-04-03	waterfall	Waterfall Charts
2016-04-03	WiSEBoot	Wild Scale-Enhanced Bootstrap
2016-04-02	agrmt	Calculate Agreement or Consensus in Ordered Rating Scales
2016-04-02	WHO	R Client for the World Health Organization API
2016-04-01	ArgumentCheck	Improved Communication to Users with Respect to Problems in Function Arguments
2016-04-01	cancerGI	Analyses of Cancer Gene Interaction
2016-04-01	DIRECT	Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior
2016-04-01	FUNTA	Functional Tangential Angle Pseudo-Depth
2016-04-01	leafletR	Interactive Web-Maps Based on the Leaflet JavaScript Library
2016-04-01	quantreg.nonpar	Nonparametric Series Quantile Regression
2016-04-01	soql	Helps Make Socrata Open Data API Calls
2016-03-31	Biograph	Explore Life Histories
2016-03-31	calACS	Calculations for All Common Subsequences
2016-03-31	collUtils	Auxiliary Package for Package 'CollapsABEL'
2016-03-31	processcontrol	Statistical Process Control Charts
2016-03-30	bdpopt	Optimisation of Bayesian Decision Problems
2016-03-30	breakaway	Species Richness Estimation and Modeling
2016-03-30	EDISON	Network Reconstruction and Changepoint Detection
2016-03-30	FMsmsnReg	Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors
2016-03-30	ForeCA	Forecastable Component Analysis
2016-03-30	GOplot	Visualization of Functional Analysis Data
2016-03-30	gplots	Various R Programming Tools for Plotting Data
2016-03-30	relimp	Relative Contribution of Effects in a Regression Model
2016-03-30	setter	Mutators that Work with Pipes
2016-03-30	TDboost	A Boosted Tweedie Compound Poisson Model
2016-03-30	tdROC	Nonparametric Estimation of Time-Dependent ROC Curve from Right Censored Survival Data
2016-03-29	densratio	Density Ratio Estimation
2016-03-29	gsbDesign	Group Sequential Bayes Design
2016-03-29	imguR	An Imgur.com API Client Package
2016-03-29	LambertW	Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data
2016-03-29	randstr	Generate Random Strings
2016-03-29	RNewsflow	Tools for Analyzing Content Homogeneity and News Diffusion using Computational Text Analysis
2016-03-29	robustETM	Robust Methods using Exponential Tilt Model
2016-03-29	svmadmm	Linear/Nonlinear SVM Classification Solver Based on ADMM and IADMM Algorithms
2016-03-29	tttplot	Time to Target Plot
2016-03-28	EffectLiteR	Average and Conditional Effects
2016-03-28	needs	Attaches and Installs Packages
2016-03-28	NPC	Nonparametric Combination of Hypothesis Tests
2016-03-28	quantspec	Quantile-Based Spectral Analysis of Time Series
2016-03-28	rappdirs	Application Directories: Determine Where to Save Data, Caches, and Logs
2016-03-28	SmarterPoland	Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl
2016-03-27	RobPer	Robust Periodogram and Periodicity Detection Methods
2016-03-26	betalink	Beta-Diversity of Species Interactions
2016-03-26	kknn	Weighted k-Nearest Neighbors
2016-03-26	NEpiC	Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals
2016-03-26	seqtest	Sequential Triangular Test
2016-03-26	sSDR	Tools Developed for Structured Sufficient Dimension Reduction (sSDR)
2016-03-26	tailDepFun	Minimum Distance Estimation of Tail Dependence Models
2016-03-26	ZillowR	R Interface to Zillow Real Estate and Mortgage Data API
2016-03-25	censorcopula	Estimate Parameter of Bivariate Copula
2016-03-25	DataClean	Data Cleaning
2016-03-25	ggnetwork	Geometries to Plot Networks with 'ggplot2'
2016-03-25	Newdistns	Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions
2016-03-25	nlWaldTest	Wald Test of Nonlinear Restrictions and Nonlinear CI
2016-03-25	tsna	Tools for Temporal Social Network Analysis
2016-03-24	DNAseqtest	Generating and Testing DNA Sequences
2016-03-24	kza	Kolmogorov-Zurbenko Adaptive Filters
2016-03-24	rollply	Moving-Window Add-on for 'plyr'
2016-03-24	wkb	Convert Between Spatial Objects and Well-Known Binary Geometry
2016-03-23	directPA	Direction Analysis for Pathways and Kinases
2016-03-23	ffbase	Basic Statistical Functions for Package 'ff'
2016-03-23	WrightMap	IRT Item-Person Map with 'ConQuest' Integration
2016-03-22	clere	Simultaneous Variables Clustering and Regression
2016-03-22	password	Create Random Passwords
2016-03-22	vegalite	Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec'
2016-03-21	getMet	Get Meteorological Data for Hydrologic Models
2016-03-21	hdi	High-Dimensional Inference
2016-03-21	MonetDB.R	Connect MonetDB to R
2016-03-21	TwoStepCLogit	Conditional Logistic Regression: A Two-Step Estimation Method
2016-03-21	VSE	Variant Set Enrichment
2016-03-19	commentr	Print Nicely Formatted Comments for Use in Script Files
2016-03-19	edgebundleR	Circle Plot with Bundled Edges
2016-03-19	EMMAgeo	End-Member Modelling of Grain-Size Data
2016-03-19	interpretR	Binary Classifier and Regression Model Interpretation Functions
2016-03-19	rfml	MarkLogic NoSQL Database Server in-Database Analytics for R
2016-03-18	ecb	Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW)
2016-03-18	hyphenatr	Tools to Hyphenate Strings Using the 'Hunspell' Hyphenation Library
2016-03-18	MiSPU	Microbiome Based Sum of Powered Score (MiSPU) Tests
2016-03-18	QRM	Provides R-Language Code to Examine Quantitative Risk Management Concepts
2016-03-18	rechonest	R Interface to Echo Nest API
2016-03-18	vottrans	Voter Transition Analysis
2016-03-17	bdscale	Remove Weekends and Holidays from ggplot2 Axes
2016-03-17	bssn	Birnbaum-Saunders Model Based on Skew-Normal Distribution
2016-03-17	housingData	U.S. Housing Data from 2008 to 2016
2016-03-17	RFgroove	Importance Measure and Selection for Groups of Variables with Random Forests
2016-03-17	rscimark	SciMark 2.0 Benchmark for Scientific and Numerical Computing
2016-03-17	TwoPhaseInd	Estimate Gene-Treatment Interaction Exploiting Randomization
2016-03-17	WaterML	Fetch and Analyze Data from 'WaterML' and 'WaterOneFlow' Web Services
2016-03-16	bayesGDS	Scalable Rejection Sampling for Bayesian Hierarchical Models
2016-03-16	dendrometeR	Analyzing Dendrometer Data
2016-03-16	edgeCorr	Spatial Edge Correction
2016-03-16	qrjoint	Joint Estimation in Linear Quantile Regression
2016-03-16	ROpenWeatherMap	R Interface to OpenWeatherMap API
2016-03-16	SCGLR	Supervised Component Generalized Linear Regression
2016-03-15	DEMOVA	DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set
2016-03-15	NBDdirichlet	NBD-Dirichlet Model of Consumer Buying Behavior for Marketing Research
2016-03-15	RADanalysis	Normalization and Study of Rank Abundance Distributions
2016-03-15	rivr	Steady and Unsteady Open-Channel Flow Computation
2016-03-14	DandEFA	Dandelion Plot for R-Mode Exploratory Factor Analysis
2016-03-14	iWISA	Wavelet-Based Index of Storm Activity
2016-03-14	logisticPCA	Binary Dimensionality Reduction
2016-03-14	rdd	Regression Discontinuity Estimation
2016-03-14	RMediation	Mediation Analysis Confidence Intervals
2016-03-14	RODBCDBI	Provides Access to Databases Through the ODBC Interface
2016-03-14	SharpeR	Statistical Significance of the Sharpe Ratio
2016-03-12	coarseDataTools	A Collection of Functions to Help with Analysis of Coarsely Observed Data
2016-03-12	cocron	Statistical Comparisons of Two or more Alpha Coefficients
2016-03-12	dcmle	Hierarchical Models Made Easy with Data Cloning
2016-03-12	fermicatsR	Fermi Large Area Telescope Catalogs
2016-03-12	lazysql	Lazy SQL Programming
2016-03-12	mdsdt	Functions for Analysis of Data with General Recognition Theory
2016-03-12	Pijavski	Global Univariate Minimization
2016-03-12	PVAClone	Population Viability Analysis with Data Cloning
2016-03-11	Dowd	Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk
2016-03-11	dynamicTreeCut	Methods for Detection of Clusters in Hierarchical Clustering Dendrograms
2016-03-10	DCODE	List Linear n-Peptide Constraints for Overlapping Protein Regions
2016-03-10	ngramrr	A Simple General Purpose N-Gram Tokenizer
2016-03-10	nnlasso	Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models
2016-03-10	osd	Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data
2016-03-10	rARPACK	Solvers for Large Scale Eigenvalue and SVD Problems
2016-03-10	sparsereg	Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data
2016-03-10	tsintermittent	Intermittent Time Series Forecasting
2016-03-09	BBEST	Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
2016-03-09	carcass	Estimation of the Number of Fatalities from Carcass Searches
2016-03-09	digitalPCR	Estimate Copy Number for Digital PCR
2016-03-09	glcm	Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs)
2016-03-09	NIPTeR	Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing
2016-03-09	regsel	Variable Selection and Regression
2016-03-09	shrink	Global, Parameterwise and Joint Shrinkage Factor Estimation
2016-03-08	braidrm	Fitting Dose Response with the BRAID Combined Action Model
2016-03-08	OmicKriging	Poly-Omic Prediction of Complex TRaits
2016-03-08	ProbitSpatial	Probit with Spatial Dependence, SAR and SEM Models
2016-03-08	scrubr	Clean Biological Occurrence Records
2016-03-07	ccaPP	(Robust) Canonical Correlation Analysis via Projection Pursuit
2016-03-07	dpmr	Data Package Manager for R
2016-03-07	lmms	Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data
2016-03-07	modes	Find the Modes and Assess the Modality of Complex and Mixture Distributions, Especially with Big Datasets
2016-03-06	jrich	Jack-Knife Support for Evolutionary Distinctiveness Indices I and W
2016-03-05	kmlShape	K-Means for Longitudinal Data using Shape-Respecting Distance
2016-03-05	palinsol	Insolation for Palaeoclimate Studies
2016-03-04	cdom	R Functions to Model CDOM Spectra
2016-03-04	hda	Heteroscedastic Discriminant Analysis
2016-03-04	Mondrian	A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events
2016-03-04	nlmrt	Functions for Nonlinear Least Squares Solutions
2016-03-04	resemble	Regression and Similarity Evaluation for Memory-Based Learning in Spectral Chemometrics
2016-03-03	karaoke	Remove Vocals from a Song
2016-03-03	lettercase	Utilities for Formatting Strings with Consistent Capitalization, Word Breaks and White Space
2016-03-03	lordif	Logistic Ordinal Regression Differential Item Functioning using IRT
2016-03-03	ProteinDescriptors	Generates Various Protein Descriptors for Machine Learning Algorithms
2016-03-03	RGraphics	Data and Functions from the Book R Graphics, Second Edition
2016-03-03	signalHsmm	Predict Presence of Signal Peptides
2016-03-02	lxb	Fast LXB File Reader
2016-03-02	MANCIE	Matrix Analysis and Normalization by Concordant Information Enhancement
2016-03-02	modQR	Multiple-Output Directional Quantile Regression
2016-03-02	pems.utils	Portable Emissions (and Other Mobile) Measurement System Utilities
2016-03-02	Rearrangement	Monotonize Point and Interval Functional Estimates by Rearrangement
2016-03-02	spiders	Fits Predator Preferences Model
2016-03-01	biomod2	Ensemble Platform for Species Distribution Modeling
2016-03-01	cymruservices	Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
2016-03-01	OTRselect	Variable Selection for Optimal Treatment Decision
2016-02-29	cocorresp	Co-Correspondence Analysis Methods
2016-02-29	LRTH	A Likelihood Ratio Test Accounting for Genetic Heterogeneity
2016-02-29	pequod	Moderated Regression Package
2016-02-29	planar	Multilayer Optics
2016-02-29	PWD	Time Series Regression Using the Power Weighted Densities (PWD) Approach
2016-02-29	RCA	Relational Class Analysis
2016-02-29	RFmarkerDetector	Multivariate Analysis of Metabolomics Data using Random Forests
2016-02-29	RYandexTranslate	R Interface to Yandex Translate API
2016-02-29	spikeSlabGAM	Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models
2016-02-29	tmpm	Trauma Mortality Prediction Model
2016-02-29	Weighted.Desc.Stat	Weighted Descriptive Statistics
2016-02-28	analogue	Analogue and Weighted Averaging Methods for Palaeoecology
2016-02-28	COUSCOus	A Residue-Residue Contact Detecting Method
2016-02-28	fastAdaboost	a Fast Implementation of Adaboost
2016-02-28	TestScorer	GUI for Entering Test Items and Obtaining Raw and Transformed Scores
2016-02-28	varian	Variability Analysis in R
2016-02-27	repolr	Repeated Measures Proportional Odds Logistic Regression
2016-02-26	gtable	Arrange 'Grobs' in Tables
2016-02-26	MRH	Multi-Resolution Estimation of the Hazard Rate
2016-02-25	apt	Asymmetric Price Transmission
2016-02-25	CryptRndTest	Statistical Tests for Cryptographic Randomness
2016-02-25	erer	Empirical Research in Economics with R
2016-02-25	Evomorph	Evolutionary Morphometric Simulation
2016-02-25	livechatR	R Wrapper for LiveChat REST API
2016-02-25	luzlogr	Lightweight Logging for R Scripts
2016-02-25	MM2S	Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
2016-02-25	PBImisc	A Set of Datasets Used in My Classes or in the Book 'Modele Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych'
2016-02-25	perARMA	Periodic Time Series Analysis
2016-02-25	qqtest	Self Calibrating Quantile-Quantile Plots for Visual Testing
2016-02-25	WACS	Multivariate Weather-State Approach Conditionally Skew-Normal Generator
2016-02-25	wfg	Weighted Fast Greedy Algorithm
2016-02-24	CONDOP	Condition-Dependent Operon Predictions
2016-02-24	GiRaF	Gibbs Random Fields Analysis
2016-02-24	qualityTools	Statistical Methods for Quality Science
2016-02-23	linERR	Linear Excess Relative Risk Model
2016-02-23	permGPU	Using GPUs in Statistical Genomics
2016-02-23	prevR	Estimating Regional Trends of a Prevalence from a DHS
2016-02-23	scs	Splitting Conic Solver
2016-02-23	sensory	Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm
2016-02-23	WikiSocio	A MediaWiki API Wrapper
2016-02-22	depmix	Dependent Mixture Models
2016-02-22	Lmoments	L-Moments and Quantile Mixtures
2016-02-22	lrequire	Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars
2016-02-22	MuViCP	MultiClass Visualizable Classification using Combination of Projections
2016-02-22	spnet	Plotting (Social) Networks on Maps
2016-02-22	sprm	Sparse and Non-Sparse Partial Robust M Regression and Classification
2016-02-21	ChannelAttributionApp	Shiny Web Application for the Multichannel Attribution Problem
2016-02-21	md	Selecting Bandwidth for Kernel Density Estimator with Minimum Distance Method
2016-02-21	mptools	RAMAS Metapop Tools
2016-02-21	vudc	Visualization of Univariate Data for Comparison
2016-02-19	clttools	Central Limit Theorem Experiments (Theoretical and Simulation)
2016-02-19	geoaxe	Split 'Geospatial' Objects into Pieces
2016-02-19	rfisheries	'Programmatic Interface to the 'openfisheries.org' API'
2016-02-19	rjags	Bayesian Graphical Models using MCMC
2016-02-18	biganalytics	Utilities for 'big.matrix' Objects from Package 'bigmemory'
2016-02-18	bigtabulate	Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects
2016-02-18	Familias	Probabilities for Pedigrees Given DNA Data
2016-02-18	microbats	An Implementation of Bat Algorithm in R
2016-02-18	minimap	Create Tile Grid Maps
2016-02-18	openNLP	Apache OpenNLP Tools Interface
2016-02-17	calibrar	Automated Parameter Estimation for Complex (Ecological) Models
2016-02-17	GGEBiplotGUI	Interactive GGE Biplots in R
2016-02-17	scenario	Construct Reduced Trees with Predefined Nodal Structures
2016-02-17	VisuClust	Visualisation of Clusters in Multivariate Data
2016-02-16	designGLMM	Finding Optimal Block Designs for a Generalised Linear Mixed Model
2016-02-16	kml	K-Means for Longitudinal Data
2016-02-16	longitudinalData	Longitudinal Data
2016-02-16	R.methodsS3	S3 Methods Simplified
2016-02-15	alphahull	Generalization of the Convex Hull of a Sample of Points in the Plane
2016-02-15	faraway	Functions and Datasets for Books by Julian Faraway
2016-02-15	fractional	Vulgar Fractions in R
2016-02-15	noncompliance	Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model
2016-02-15	pdftables	Programmatic Conversion of PDF Tables
2016-02-14	geotech	Geotechnical Engineering
2016-02-14	GrammR	Graphical Representation and Modeling of Metagenomic Reads
2016-02-14	ipfp	Fast Implementation of the Iterative Proportional Fitting Procedure in C
2016-02-13	BonEV	An Improved Multiple Testing Procedure for Controlling False Discovery Rates
2016-02-13	MSG	Data and Functions for the Book Modern Statistical Graphics
2016-02-13	TransP	Implementation of Transportation Problem Algorithms
2016-02-12	FCMapper	Fuzzy Cognitive Mapping
2016-02-12	MCMC.OTU	Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology
2016-02-12	TeachingDemos	Demonstrations for Teaching and Learning
2016-02-12	WaverR	Data Estimation using Weighted Averages of Multiple Regressions
2016-02-11	BGPhazard	Markov Beta and Gamma Processes for Modeling Hazard Rates
2016-02-11	ionr	Test for Indifference of Indicator
2016-02-11	spacom	Spatially Weighted Context Data for Multilevel Modelling
2016-02-11	starma	Modelling Space Time AutoRegressive Moving Average (STARMA) Processes
2016-02-11	titrationCurves	Acid/Base, Complexation, Redox, and Precipitation Titration Curves
2016-02-10	EBMAforecast	Ensemble BMA Forecasting
2016-02-10	exploreR	Tools for Quickly Exploring Data
2016-02-10	mvnTest	Goodness of Fit Tests for Multivariate Normality
2016-02-09	cooccur	Probabilistic Species Co-Occurrence Analysis in R
2016-02-09	FMP	Filtered Monotonic Polynomial IRT Models
2016-02-09	latticeExtra	Extra Graphical Utilities Based on Lattice
2016-02-09	loe	Local Ordinal Embedding
2016-02-09	soc.ca	Specific Correspondence Analysis for the Social Sciences
2016-02-09	Watersheds	Spatial Watershed Aggregation and Spatial Drainage Network Analysis
2016-02-08	ClusterStability	Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions
2016-02-08	guess	Adjust Estimates of Learning for Guessing
2016-02-08	munfold	Metric Unfolding
2016-02-08	spgrass6	Interface Between GRASS 6+ Geographical Information System and R
2016-02-07	bayesDccGarch	The Bayesian Dynamic Conditional Correlation GARCH Model
2016-02-07	Bmix	Bayesian Sampling for Stick-Breaking Mixtures
2016-02-07	caretEnsemble	Ensembles of Caret Models
2016-02-07	midastouch	Multiple Imputation by Distance Aided Donor Selection
2016-02-07	MixedDataImpute	Missing Data Imputation for Continuous and Categorical Data using Nonparametric Bayesian Joint Models
2016-02-07	mpbart	Multinomial Probit Bayesian Additive Regression Trees
2016-02-07	repmis	Miscellaneous Tools for Reproducible Research
2016-02-07	RLogicalOps	Process Logical Operations
2016-02-07	tgp	Bayesian Treed Gaussian Process Models
2016-02-05	DRaWR	Discriminative Random Walk with Restart
2016-02-05	rdian	Client Library for The Guardian
2016-02-05	TEQR	Target Equivalence Range Design
2016-02-05	WikipediaR	R-Based Wikipedia Client
2016-02-05	xtable	Export Tables to LaTeX or HTML
2016-02-04	ABCp2	Approximate Bayesian Computational Model for Estimating P2
2016-02-04	ABHgenotypeR	Easy Visualization of ABH Genotypes
2016-02-04	DiagrammeRsvg	Export DiagrammeR Graphviz Graphs as SVG
2016-02-04	elexr	Load Associated Press Election Results with Elex
2016-02-04	epandist	Statistical Functions for the Censored and Uncensored Epanechnikov Distribution
2016-02-04	IFP	Identifying Functional Polymorphisms
2016-02-04	Sky	Canopy Openness Analyzer Package
2016-02-04	tumgr	Tumor Growth Rate Analysis
2016-02-03	rworldmap	Mapping Global Data
2016-02-03	sgeostat	An Object-Oriented Framework for Geostatistical Modeling in S+
2016-02-02	FastGP	Efficiently Using Gaussian Processes with Rcpp and RcppEigen
2016-02-02	GGMridge	Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation
2016-02-02	graticule	Meridional and Parallel Lines for Maps
2016-02-02	nnet	Feed-Forward Neural Networks and Multinomial Log-Linear Models
2016-02-02	patPRO	Visualizing Temporal Microbiome Data
2016-02-02	quantileDA	Quantile Classifier
2016-02-01	acid	Analysing Conditional Income Distributions
2016-02-01	cmprskQR	Analysis of Competing Risks Using Quantile Regressions
2016-02-01	exreport	Fast, Reliable and Elegant Reproducible Research
2016-02-01	gsDesign	Group Sequential Design
2016-02-01	murphydiagram	Murphy Diagrams for Forecast Comparisons
2016-02-01	scorer	Quickly Score Models in Data Science and Machine Learning
2016-01-31	backblazer	Bindings to the Backblaze B2 API
2016-01-31	psoptim	Particle Swarm Optimization
2016-01-31	regpro	Nonparametric Regression
2016-01-31	tripEstimation	Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes
2016-01-30	asymLD	Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data
2016-01-30	cepp	Context Driven Exploratory Projection Pursuit
2016-01-30	EBglmnet	Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
2016-01-30	StockChina	Real-Time Stock Price & Volume in China Market
2016-01-30	wildpoker	Best Hand Analysis for Poker Variants Including Wildcards
2016-01-30	zooaRch	Analytical Tools for Zooarchaeological Data
2016-01-29	bqtl	Bayesian QTL Mapping Toolkit
2016-01-29	IMP	Interactive Model Performance Evaluation
2016-01-28	sscor	Robust Correlation Estimation and Testing Based on Spatial Signs
2016-01-27	LaplaceDeconv	Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval
2016-01-27	wBoot	Bootstrap Methods
2016-01-26	distance.sample.size	Calculates Study Size Required for Distance Sampling
2016-01-26	SteinIV	Semi-Parametric Stein-Like Estimator with Instrumental Variables
2016-01-25	surveyoutliers	Helps Manage Outliers in Sample Surveys
2016-01-24	labdsv	Ordination and Multivariate Analysis for Ecology
2016-01-24	medicalrisk	Medical Risk and Comorbidity Tools for ICD-9-CM Data
2016-01-24	VertexSimilarity	Creates Vertex Similarity Matrix for an Undirected Graph
2016-01-23	AsynchLong	Regression Analysis of Sparse Asynchronous Longitudinal Data
2016-01-23	fSRM	Social Relations Analyses with Roles ("Family SRM")
2016-01-23	ggmap	Spatial Visualization with ggplot2
2016-01-23	ramsvm	Reinforced Angle-Based Multicategory Support Vector Machines
2016-01-23	webreadr	Tools for Reading Formatted Access Log Files
2016-01-22	DYM	Did You Mean?
2016-01-22	netgen	Network Generator for Combinatorial Graph Problems
2016-01-21	FreqProf	Frequency Profiles Computing and Plotting
2016-01-21	sclero	Measure Growth Patterns and Align Sampling Spots in Photographs
2016-01-20	corclass	Correlational Class Analysis
2016-01-20	extremevalues	Univariate Outlier Detection
2016-01-20	miCoPTCM	Promotion Time Cure Model with Mis-Measured Covariates
2016-01-19	AmpliconDuo	Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
2016-01-19	igraphinshiny	Use 'shiny' to Demo 'igraph'
2016-01-19	pAnalysis	Benchmarking and Rescaling R2 using Noise Percentile Analysis
2016-01-19	simmr	A Stable Isotope Mixing Model
2016-01-19	SNscan	Scan Statistics in Social Networks
2016-01-19	SubpathwayLNCE	Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory
2016-01-18	assortnet	Calculate the Assortativity Coefficient of Weighted and Binary Networks
2016-01-18	CepLDA	Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability
2016-01-18	cycleRtools	Tools for Cycling Data Analysis
2016-01-18	OceanView	Visualisation of Oceanographic Data and Model Output
2016-01-18	plot3Drgl	Plotting Multi-Dimensional Data - Using 'rgl'
2016-01-18	rpcdsearch	Tools for the Construction of Clinical Code Lists for Primary Care Database Studies
2016-01-17	freqparcoord	Novel Methods for Parallel Coordinates
2016-01-16	OriGen	Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
2016-01-15	Actigraphy	Actigraphy Data Analysis
2016-01-15	FDRsampsize	Compute Sample Size that Meets Requirements for Average Power and FDR
2016-01-15	HKprocess	Hurst-Kolmogorov Process
2016-01-15	networkDynamic	Dynamic Extensions for Network Objects
2016-01-15	PASWR2	Probability and Statistics with R, Second Edition
2016-01-15	pez	Phylogenetics for the Environmental Sciences
2016-01-15	sharx	Models and Data Sets for the Study of Species-Area Relationships
2016-01-13	BinaryEMVS	Variable Selection for Binary Data Using the EM Algorithm
2016-01-13	breakpoint	An R Package for Multiple Break-Point Detection via the Cross-Entropy Method
2016-01-13	dChipIO	Methods for Reading dChip Files
2016-01-13	HWxtest	Exact Tests for Hardy-Weinberg Proportions
2016-01-13	lpSolveAPI	R Interface to 'lp_solve' Version 5.5.2.0
2016-01-13	MASSTIMATE	Body Mass Estimation Equations for Vertebrates
2016-01-13	proftools	Profile Output Processing Tools for R
2016-01-13	sivipm	Sensitivity Indices with Dependent Inputs
2016-01-13	svs	Tools for Semantic Vector Spaces
2016-01-12	CircOutlier	Detection of Outliers in Circular-Circular Regression
2016-01-12	ggcorrplot	Visualization of a Correlation Matrix using 'ggplot2'
2016-01-12	intercure	Cure Rate Estimators for Interval Censored Data
2016-01-12	mefa	Multivariate Data Handling in Ecology and Biogeography
2016-01-12	msltrend	Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records
2016-01-12	networkDynamicData	Dynamic (Longitudinal) Network Datasets
2016-01-12	primerTree	Visually Assessing the Specificity and Informativeness of Primer Pairs
2016-01-12	rodd	Optimal Discriminating Designs
2016-01-12	SALES	Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms
2016-01-11	concordance	Product Concordance
2016-01-11	gSEM	Semi-Supervised Generalized Structural Equation Modeling
2016-01-11	LPR	Lasso and Partial Ridge
2016-01-11	mmppr	Markov Modulated Poisson Process for Unsupervised Event Detection in Time Series of Counts
2016-01-11	pRF	Permutation Significance for Random Forests
2016-01-11	rlm	Robust Fitting of Linear Model
2016-01-08	bmeta	Bayesian Meta-Analysis and Meta-Regression
2016-01-08	fwi.fbp	Fire Weather Index System and Fire Behaviour Prediction System Calculations
2016-01-08	MakefileR	Create 'Makefiles' Using R
2016-01-08	robustHD	Robust Methods for High-Dimensional Data
2016-01-08	S2sls	Spatial Two Stage Least Squares Estimation
2016-01-08	vrcp	Change Point Estimation for Regression with Varying Segments and Heteroscedastic Variances
2016-01-07	AsioHeaders	'Asio' C++ Header Files
2016-01-07	glmvsd	Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models
2016-01-07	gyriq	Kinship-Adjusted Survival SNP-Set Analysis
2016-01-07	neuroim	Data Structures and Handling for Neuroimaging Data
2016-01-07	solarPos	Solar Position Algorithm for Solar Radiation Applications
2016-01-06	RcmdrPlugin.FactoMineR	Graphical User Interface for FactoMineR
2016-01-06	rotations	Tools for Working with Rotation Data
2016-01-06	SimRAD	Simulations to Predict the Number of RAD and GBS Loci
2016-01-06	stlplus	Enhanced Seasonal Decomposition of Time Series by Loess
2016-01-05	cds	Constrained Dual Scaling for Detecting Response Styles
2016-01-05	hiddenf	The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity
2016-01-05	RImagePalette	Extract the Colors from Images
2016-01-04	cg	Compare Groups, Analytically and Graphically
2016-01-04	hot.deck	Multiple Hot-Deck Imputation
2016-01-04	LiblineaR.ACF	Linear Classification with Online Adaptation of Coordinate Frequencies
2016-01-04	PlayerRatings	Dynamic Updating Methods for Player Ratings Estimation
2016-01-04	qtlc	Densitometric Analysis of Thin-Layer Chromatography Plates
2016-01-03	grpss	Group Screening and Selection
2016-01-03	icensmis	Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes
2016-01-03	rainbow	Rainbow Plots, Bagplots and Boxplots for Functional Data
2016-01-03	request	High Level 'HTTP' Client
2016-01-03	tempcyclesdata	Climate Data from Wang and Dillon
2016-01-01	hwde	Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
2015-12-31	DTR	Estimation and Comparison of Dynamic Treatment Regimes
2015-12-31	ParallelPC	Paralellised Versions of Constraint Based Causal Discovery Algorithms
2015-12-30	ifctools	Italian Fiscal Code ('Codice Fiscale') Utilities
2015-12-30	plspm.formula	Formula Based PLS Path Modeling
2015-12-30	robreg3S	Three-Step Regression and Inference for Cellwise and Casewise Contamination
2015-12-30	sdmvspecies	Create Virtual Species for Species Distribution Modelling
2015-12-30	spdynmod	Spatio-Dynamic Wetland Plant Communities Model
2015-12-29	Deducer	A Data Analysis GUI for R
2015-12-29	diffeR	Metrics of Difference for Comparing Pairs of Maps
2015-12-29	TOC	Total Operating Characteristic Curve and ROC Curve
2015-12-29	xtal	Crystallization Toolset
2015-12-28	BiasedUrn	Biased Urn Model Distributions
2015-12-28	qiimer	Work with QIIME Output Files in R
2015-12-28	rmgarch	Multivariate GARCH Models
2015-12-28	Rsolnp	General Non-Linear Optimization
2015-12-27	MultAlloc	Optimal Allocation in Stratified Sampling
2015-12-26	validateRS	One-Sided Multivariate Testing Procedures for Rating Systems
2015-12-24	MediaK	Calculate MeDiA_K Distance
2015-12-24	multifwf	Read Fixed Width Format Files Containing Lines of Different Type
2015-12-24	SchemaOnRead	Automated Schema on Read
2015-12-24	shock	Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models
2015-12-24	XNomial	Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities
2015-12-23	batteryreduction	An R Package for Data Reduction by Battery Reduction
2015-12-23	BlandAltmanLeh	Plots (Slightly Extended) Bland-Altman Plots
2015-12-23	kergp	Gaussian Process Laboratory
2015-12-23	r4ss	R Code for Stock Synthesis
2015-12-22	federalregister	Client Package for the U.S. Federal Register API
2015-12-22	gear	Geostatistical Analysis in R
2015-12-22	Lock5withR	Datasets for 'Statistics: Unlocking the Power of Data'
2015-12-22	RPublica	ProPublica API Client
2015-12-21	auRoc	Various Methods to Estimate the AUC
2015-12-21	clogitboost	Boosting Conditional Logit Model
2015-12-21	ltsa	Linear Time Series Analysis
2015-12-21	metricsgraphics	Create Interactive Charts with the JavaScript 'MetricsGraphics' Library
2015-12-21	nnetpredint	Prediction Intervals of Multi-Layer Neural Networks
2015-12-21	ProbYX	Inference for the Stress-Strength Model R = P(Y<X)
2015-12-21	statebins	U.S. State Cartogram Heatmaps in R; an Alternative to Choropleth Maps for USA States
2015-12-21	VARsignR	Sign Restrictions, Bayesian, Vector Autoregression Models
2015-12-20	depth.plot	Multivariate Analogy of Quantiles
2015-12-19	dynsim	Dynamic Simulations of Autoregressive Relationships
2015-12-19	FWDselect	Selecting Variables in Regression Models
2015-12-19	MTurkRGUI	A Graphical User Interface for MTurkR
2015-12-19	TITAN2	Threshold Indicator Taxa Analysis
2015-12-18	bodenmiller	Profilling of Peripheral Blood Mononuclear Cells using CyTOF
2015-12-18	granovaGG	Graphical Analysis of Variance Using ggplot2
2015-12-18	VBLPCM	Variational Bayes Latent Position Cluster Model for Networks
2015-12-17	CCAGFA	Bayesian Canonical Correlation Analysis and Group Factor Analysis
2015-12-16	dse	Dynamic Systems Estimation (Time Series Package)
2015-12-16	gpDDE	General Profiling Method for Delay Differential Equation
2015-12-16	keep	Arrays with Better Control over Dimension Dropping
2015-12-16	pamm	Power Analysis for Random Effects in Mixed Models
2015-12-16	PHeval	Evaluation of the Proportional Hazards Assumption with a Standardized Score Process
2015-12-16	rebus.datetimes	Date and Time Extensions for the 'rebus' Package
2015-12-16	rebus.numbers	Numeric Extensions for the 'rebus' Package
2015-12-16	RSGHB	Functions for Hierarchical Bayesian Estimation: A Flexible Approach
2015-12-16	tfplot	Time Frame User Utilities
2015-12-16	tframe	Time Frame Coding Kernel
2015-12-15	rTensor	Tools for Tensor Analysis and Decomposition
2015-12-15	treecm	Centre of Mass Assessment and Consolidation of Trees
2015-12-14	dendsort	Modular Leaf Ordering Methods for Dendrogram Nodes
2015-12-14	exif	Read EXIF Metadata from JPEGs
2015-12-14	hellno	Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()'
2015-12-14	hpoPlot	Functions for Plotting HPO Terms
2015-12-14	LightningR	Tools for Communication with Lightning-Viz Server
2015-12-14	vita	Variable Importance Testing Approaches
2015-12-13	CITAN	CITation ANalysis Toolpack
2015-12-13	solarius	An R Interface to SOLAR
2015-12-12	ADMMnet	Regularized Model with Selecting the Number of Non-Zeros
2015-12-12	Frames2	Estimation in Dual Frame Surveys
2015-12-12	HLMdiag	Diagnostic Tools for Hierarchical (Multilevel) Linear Models
2015-12-12	libamtrack	Computational Routines for Proton and Ion Radiotherapy
2015-12-11	rbvs	Ranking-Based Variable Selection
2015-12-11	RXMCDA	Functions to Parse and Create XMCDA Files
2015-12-11	SAFD	Statistical Analysis of Fuzzy Data
2015-12-11	SPmlficmcm	Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs
2015-12-10	CCMnet	Simulate Congruence Class Model for Networks
2015-12-10	RANKS	Ranking of Nodes with Kernelized Score Functions
2015-12-10	simplegraph	Simple Graph Data Types and Basic Algorithms
2015-12-09	maddison	Maddison Project Database
2015-12-09	MScombine	Combine Data from Positive and Negative Ionization Mode Finding Common Entities
2015-12-09	NetPreProc	Network Pre-Processing and Normalization
2015-12-09	orsifronts	Southern Ocean Frontal Distributions (Orsi)
2015-12-09	pitchRx	Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing 'pitchfx'
2015-12-09	riskR	Risk Management
2015-12-09	rwfec	R Wireless, Forward Error Correction
2015-12-09	sensitivity2x2xk	Sensitivity Analysis for 2x2xk Tables in Observational Studies
2015-12-08	MNS	Mixed Neighbourhood Selection
2015-12-08	PAGWAS	Pathway Analysis Methods for Genomewide Association Data
2015-12-07	cranlogs	Download Logs from the 'RStudio' 'CRAN' Mirror
2015-12-07	G2Sd	Grain-Size Statistics and Description of Sediment
2015-12-07	PIGShift	Polygenic Inverse Gamma Shifts
2015-12-07	WriteXLS	Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files
2015-12-06	caRpools	CRISPR AnalyzeR for Pooled CRISPR Screens
2015-12-05	MetaCycle	Evaluate Periodicity in Large Scale Data
2015-12-05	sleekts	4253H, Twice Smoothing
2015-12-04	acp	Autoregressive Conditional Poisson
2015-12-04	hierfstat	Estimation and Tests of Hierarchical F-Statistics
2015-12-04	npIntFactRep	Nonparametric Interaction Tests for Factorial Designs with Repeated Measures
2015-12-04	ordiBreadth	Ordinated Diet Breadth
2015-12-04	peakPick	Peak Picking Methods Inspired by Biological Data
2015-12-03	EpiDynamics	Dynamic Models in Epidemiology
2015-12-03	pedometrics	Pedometric Tools and Techniques
2015-12-03	ppcor	Partial and Semi-Partial (Part) Correlation
2015-12-03	ryouready	Companion to the Forthcoming Book - R you Ready?
2015-12-03	tggd	The Standard Distribution Functions for the Truncated Generalised Gamma Distribution
2015-12-02	features	Feature Extraction for Discretely-Sampled Functional Data
2015-12-02	kriens	Continuation Passing Style Development
2015-12-02	paleoTS	Analyze Paleontological Time-Series
2015-12-02	QCSIS	Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation
2015-11-30	causaldrf	Tools for Estimating Causal Dose Response Functions
2015-11-30	dsample	Discretization-Based Direct Random Sample Generation
2015-11-30	injectoR	R Dependency Injection
2015-11-30	latex2exp	Use LaTeX Expressions in Plots
2015-11-30	lodGWAS	Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection
2015-11-30	oaColors	OpenAnalytics Colors Package
2015-11-30	oaPlots	OpenAnalytics Plots Package
2015-11-30	proton	The Proton Game
2015-11-29	mcemGLM	Maximum Likelihood Estimation for Generalized Linear Mixed Models
2015-11-28	ELMR	Extreme Machine Learning (ELM)
2015-11-26	GroupTest	Multiple Testing Procedure for Grouped Hypotheses
2015-11-25	bvarsv	Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
2015-11-25	MMWRweek	Convert Dates to MMWR Day, Week, and Year
2015-11-24	apricom	Tools for the a Priori Comparison of Regression Modelling Strategies
2015-11-24	BMS	Bayesian Model Averaging Library
2015-11-24	ipflasso	Integrative Lasso with Penalty Factors
2015-11-24	kofnGA	A Genetic Algorithm for Fixed-Size Subset Selection
2015-11-24	pgnorm	The p-Generalized Normal Distribution
2015-11-24	UncerIn2	Implements Models of Uncertainty into the Interpolation Functions
2015-11-24	yummlyr	R Bindings for Yummly API
2015-11-23	AggregateR	Aggregate Numeric, Date and Categorical Variables by an ID
2015-11-23	flexPM	Flexible Parametric Models for Censored and Truncated Data
2015-11-23	ForecastCombinations	Forecast Combinations
2015-11-23	SimSeq	Nonparametric Simulation of RNA-Seq Data
2015-11-22	labelrank	Predicting Rankings of Labels
2015-11-22	lda	Collapsed Gibbs Sampling Methods for Topic Models
2015-11-22	tracheideR	Standardize Tracheidograms
2015-11-21	FACTMLE	Maximum Likelihood Factor Analysis
2015-11-21	gfcanalysis	Tools for Working with Hansen et al. Global Forest Change Dataset
2015-11-19	glmx	Generalized Linear Models Extended
2015-11-19	s4vd	Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection
2015-11-18	ConConPiWiFun	Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
2015-11-18	JGEE	Joint Generalized Estimating Equation Solver
2015-11-18	jvnVaR	Value at Risk
2015-11-18	rapport	A Report Templating System
2015-11-18	tnet	Software for Analysis of Weighted, Two-Mode, and Longitudinal Networks
2015-11-18	Traitspace	A Predictive Model for Trait Based Community Assembly of Plant Species
2015-11-17	phylometrics	Estimating Statistical Errors of Phylogenetic Metrics
2015-11-16	dslice	Dynamic Slicing
2015-11-16	gridDebug	Debugging 'grid' Graphics
2015-11-16	nCDunnett	Noncentral Dunnett's Test Distribution
2015-11-16	prism	Access Data from the Oregon State Prism Climate Project
2015-11-15	landest	Landmark Estimation of Survival and Treatment Effect
2015-11-15	rPython	Package Allowing R to Call Python
2015-11-15	sms	Spatial Microsimulation
2015-11-13	Map2NCBI	Mapping Markers to the Nearest Genomic Feature
2015-11-13	REdaS	Companion Package to the Book 'R: Einführung durch angewandte Statistik'
2015-11-13	TopKLists	Inference, Aggregation and Visualization for Top-K Ranked Lists
2015-11-12	DirichletReg	Dirichlet Regression in R
2015-11-12	franc	Detect the Language of Text
2015-11-12	ptycho	Bayesian Variable Selection with Hierarchical Priors
2015-11-12	rnetcarto	Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R)
2015-11-11	gbm2sas	Convert GBM Object Trees to SAS Code
2015-11-11	qtpaint	Qt-Based Painting Infrastructure
2015-11-11	steadyICA	ICA and Tests of Independence via Multivariate Distance Covariance
2015-11-11	TRD	Transmission Ratio Distortion
2015-11-10	FastKM	A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
2015-11-10	TruncatedNormal	Truncated Multivariate Normal
2015-11-09	ade4TkGUI	'ade4' Tcl/Tk Graphical User Interface
2015-11-09	CovSel	Model-Free Covariate Selection
2015-11-09	genSurv	Generating Multi-State Survival Data
2015-11-09	gvc	Global Value Chains Tools
2015-11-09	maxLik	Maximum Likelihood Estimation and Related Tools
2015-11-09	smoothHR	Smooth Hazard Ratio Curves Taking a Reference Value
2015-11-09	TPmsm	Estimation of Transition Probabilities in Multistate Models
2015-11-09	YPmodel	The Short-Term and Long-Term Hazard Ratio Model for Survival Data
2015-11-08	BaSTA	Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data
2015-11-07	LRcontrast	Dose Response Signal Detection under Model Uncertainty
2015-11-07	pampe	Implementation of the Panel Data Approach Method for Program Evaluation
2015-11-07	personograph	Pictographic Representation of Treatment Effects
2015-11-07	phia	Post-Hoc Interaction Analysis
2015-11-07	Rtts	Convert Text into Speech
2015-11-07	SPCALDA	A New Reduced-Rank Linear Discriminant Analysis Method
2015-11-06	BayesMAMS	Designing Bayesian Multi-Arm Multi-Stage Studies
2015-11-06	easypower	Sample Size Estimation for Experimental Designs
2015-11-06	rucm	Implementation of Unobserved Components Model (UCM)
2015-11-06	seedy	Simulation of Evolutionary and Epidemiological Dynamics
2015-11-05	rchess	Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection
2015-11-05	survJamda	Survival Prediction by Joint Analysis of Microarray Gene Expression Data
2015-11-05	tolBasis	Fundamental Definitions and Utilities of the Time Oriented Language (TOL)
2015-11-04	phylin	Spatial Interpolation of Genetic Data
2015-11-04	relen	Compute Relative Entropy
2015-11-04	wPerm	Permutation Tests
2015-11-03	merror	Accuracy and Precision of Measurements
2015-11-03	Phxnlme	Run Phoenix NLME and Perform Post-Processing
2015-11-03	RRTCS	Randomized Response Techniques for Complex Surveys
2015-11-03	SLOPE	Sorted L1 Penalized Estimation (SLOPE)
2015-11-02	mvProbit	Multivariate Probit Models
2015-11-02	Rcolombos	Interface to Colombos Compendia using the Exposed REST API
2015-11-02	RGoogleAnalyticsPremium	Unsampled Data in R for Google Analytics Premium Accounts
2015-11-01	DataLoader	Import Multiple File Types
2015-11-01	NetSwan	Network Strengths and Weaknesses Analysis
2015-11-01	nlrr	Non-Linear Relative Risk Estimation and Plotting
2015-11-01	PortRisk	Portfolio Risk Analysis
2015-10-31	AlgebraicHaploPackage	Haplotype Two Snips Out of a Paired Group of Patients
2015-10-31	corkscrew	Preprocessor for Data Modeling
2015-10-31	kedd	Kernel Estimator and Bandwidth Selection for Density and Its Derivatives
2015-10-31	smss	Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences"
2015-10-31	TSTr	Ternary Search Tree for Auto-Completion and Spell Checking
2015-10-29	CDVine	Statistical Inference of C- And D-Vine Copulas
2015-10-29	RNaviCell	Visualization of High-Throughput Data on Large-Scale Biological Networks
2015-10-28	aroma.cn	Copy-Number Analysis of Large Microarray Data Sets
2015-10-28	RESS	Integrates R and Essentia
2015-10-28	TESS	Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
2015-10-27	ACNE	Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
2015-10-27	calmate	Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
2015-10-27	settings	Software Option Settings Manager for R
2015-10-26	batman	Convert Categorical Representations of Logicals to Actual Logicals
2015-10-26	feature	Local Inferential Feature Significance for Multivariate Kernel Density Estimation
2015-10-26	TDCor	Gene Network Inference from Time-Series Transcriptomic Data
2015-10-25	MixedTS	Mixed Tempered Stable Distribution
2015-10-25	MPCI	Multivariate Process Capability Indices (MPCI)
2015-10-24	AdapEnetClass	A Class of Adaptive Elastic Net Methods for Censored Data
2015-10-24	CoxPlus	Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects
2015-10-24	jackknifeKME	Jackknife Estimates of Kaplan-Meier Estimators or Integrals
2015-10-24	LDAvis	Interactive Visualization of Topic Models
2015-10-24	PanelCount	Random Effects and/or Sample Selection Models for Panel Count Data
2015-10-23	hotspot	Software Hotspot Analysis
2015-10-23	imputeYn	Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares
2015-10-23	mhde	Minimum Hellinger Distance Test for Normality
2015-10-23	poisson	Simulating Homogenous & Non-Homogenous Poisson Processes
2015-10-23	pvclust	Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
2015-10-23	qlcVisualize	Visualization for Quantitative Language Comparison (QLC)
2015-10-22	ckanr	Client for the Comprehensive Knowledge Archive Network ('CKAN') 'API'
2015-10-22	dgmb	Simulating Data for PLS Mode B Structural Models
2015-10-22	HotDeckImputation	Hot Deck Imputation Methods for Missing Data
2015-10-22	TCGA2STAT	Simple TCGA Data Access for Integrated Statistical Analysis in R
2015-10-22	uptimeRobot	Access the UptimeRobot Ping API
2015-10-22	weightedScores	Weighted Scores Method for Regression Models with Dependent Data
2015-10-21	fanovaGraph	Building Kriging Models from FANOVA Graphs
2015-10-21	MultiRR	Bias, Precision, and Power for Multi-Level Random Regressions
2015-10-20	crank	Completing Ranks
2015-10-20	eventInterval	Sequential Event Interval Analysis
2015-10-20	GSSE	Genotype-Specific Survival Estimation
2015-10-20	prettyR	Pretty Descriptive Stats
2015-10-19	crop	Graphics Cropping Tool
2015-10-19	diezeit	R Interface to the ZEIT ONLINE Content API
2015-10-19	HiDimDA	High Dimensional Discriminant Analysis
2015-10-19	ksrlive	Identify Kinase Substrate Relationships Using Dynamic Data
2015-10-19	RcmdrPlugin.Export	Export R Output to LaTeX or HTML
2015-10-19	SimHaz	Simulated Survival and Hazard Analysis for Time-Dependent Exposure
2015-10-19	TIMP	Fitting Separable Nonlinear Models in Spectroscopy and Microscopy
2015-10-18	complmrob	Robust Linear Regression with Compositional Data as Covariates
2015-10-18	DiscreteWeibull	Discrete Weibull Distributions (Type 1 and 3)
2015-10-17	BcDiag	Diagnostics Plots for Bicluster Data
2015-10-16	CHsharp	Choi and Hall Style Data Sharpening
2015-10-14	covBM	Brownian Motion Processes for 'nlme'-Models
2015-10-14	ecotoxicology	Methods for Ecotoxicology
2015-10-14	ReliabilityTheory	Tools for Structural Reliability Analysis
2015-10-14	snowfall	Easier cluster computing (based on snow)
2015-10-14	TLBC	Two-Level Behavior Classification
2015-10-13	birdring	Methods to Analyse Ring Re-Encounter Data
2015-10-13	FCGR	Fatigue Crack Growth in Reliability
2015-10-13	lift	Compute the Top Decile Lift and Plot the Lift Curve
2015-10-13	SyncMove	Subsample Temporal Data to Synchronal Events and Compute the MCI
2015-10-13	wingui	Advanced Windows Functions
2015-10-12	apsimr	Edit, Run and Evaluate APSIM Simulations Easily Using R
2015-10-12	compendiumdb	Tools for Retrieval and Storage of Functional Genomics Data
2015-10-12	deformula	Integration of One-Dimensional Functions with Double Exponential Formulas
2015-10-12	EloChoice	Preference Rating for Visual Stimuli Based on Elo Ratings
2015-10-12	geesmv	Modified Variance Estimators for Generalized Estimating Equations
2015-10-12	subspace	Interface to OpenSubspace
2015-10-11	gitter	Quantification of Pinned Microbial Cultures
2015-10-11	MVT	Estimation and Testing for the Multivariate t-Distribution
2015-10-10	HDGLM	Tests for High Dimensional Generalized Linear Models
2015-10-10	pedgene	Gene-Level Statistics for Pedigree Data
2015-10-10	sequenza	Copy Number Estimation from Tumor Genome Sequencing Data
2015-10-10	sisal	Sequential Input Selection Algorithm
2015-10-09	FIACH	Retrospective Noise Control for fMRI
2015-10-08	fastdigest	Fast, Low Memory-Footprint Digests of R Objects
2015-10-08	SurvRegCensCov	Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate
2015-10-07	EBEN	Empirical Bayesian Elastic Net
2015-10-07	fanplot	Visualisation of Sequential Probability Distributions Using Fan Charts
2015-10-06	assertive.code	Assertions to Check Properties of Code
2015-10-06	assertive.data	Assertions to Check Properties of Data
2015-10-06	assertive.data.uk	Assertions to Check Properties of Strings
2015-10-06	assertive.data.us	Assertions to Check Properties of Strings
2015-10-06	assertive.matrices	Assertions to Check Properties of Matrices
2015-10-06	assertive.models	Assertions to Check Properties of Models
2015-10-06	elasso	Enhanced Least Absolute Shrinkage and Selection Operator Regression Model
2015-10-05	cate	High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation
2015-10-05	conicfit	Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov
2015-10-05	diagonals	Block Diagonal Extraction or Replacement
2015-10-05	geofd	Spatial Prediction for Function Value Data
2015-10-05	smallarea	Fits a Fay Herriot Model
2015-10-05	wqs	Weighted Quantile Sum Regression
2015-10-03	MetaPath	Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
2015-10-02	GeoBoxplot	Geographic Box Plot
2015-10-02	SphericalK	Spherical K-Function
2015-10-01	fail	File Abstraction Interface Layer (FAIL)
2015-10-01	LSTS	Locally Stationary Time Series
2015-10-01	RcmdrPlugin.EBM	Rcmdr Evidence Based Medicine Plug-in Package
2015-10-01	sanon	Stratified Analysis with Nonparametric Covariable Adjustment
2015-10-01	snpEnrichment	SNPs Enrichment Analysis
2015-09-29	kernelFactory	Kernel Factory: An Ensemble of Kernel Machines
2015-09-29	learNN	Examples of Neural Networks
2015-09-28	MoTBFs	Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions
2015-09-28	pdc	Permutation Distribution Clustering
2015-09-28	pwrRasch	Statistical Power Simulation for Testing the Rasch Model
2015-09-28	rleafmap	Interactive Maps with R and Leaflet
2015-09-28	SOPIE	Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
2015-09-27	plotpc	Plot Principal Component Histograms Around a Scatter Plot
2015-09-27	twostageTE	Two-Stage Threshold Estimation
2015-09-26	BCBCSF	Bias-Corrected Bayesian Classification with Selected Features
2015-09-26	Cairo	R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output
2015-09-26	nivm	Noninferiority Tests with Variable Margins
2015-09-26	TTS	Master Curve Estimates Corresponding to Time-Temperature Superposition
2015-09-26	weightTAPSPACK	Weight TAPS Data
2015-09-25	drsmooth	Dose-Response Modeling with Smoothing Splines
2015-09-25	nanop	Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function
2015-09-25	Skillings.Mack	The Skillings-Mack Test Statistic for Block Designs with Missing Observations
2015-09-25	STAND	Statistical Analysis of Non-Detects
2015-09-24	drLumi	Multiplex Immunoassays Data Analysis
2015-09-24	meteo	Spatio-Temporal Analysis and Mapping of Meteorological Observations
2015-09-24	NostalgiR	Advanced Text-Based Plots
2015-09-23	packagetrackr	Track R Package Downloads from RStudio's CRAN Mirror
2015-09-22	LPCM	Local Principal Curve Methods
2015-09-21	Rip46	Utils for IP4 and IP6 Addresses
2015-09-20	cord	Community Estimation in G-Models via CORD
2015-09-20	rcrypt	Symmetric File Encryption Using GPG
2015-09-19	crimelinkage	Statistical Methods for Crime Series Linkage
2015-09-19	ImportExport	Import and Export Data
2015-09-19	kelvin	Calculate Solutions to the Kelvin Differential Equation using Bessel Functions
2015-09-19	lpSolve	Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
2015-09-18	GAR	Authorize and Request Google Analytics Data
2015-09-18	GRTo	Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes
2015-09-18	rlecuyer	R Interface to RNG with Multiple Streams
2015-09-18	Rtwalk	The R Implementation of the 't-walk' MCMC Algorithm
2015-09-17	backtest	Exploring Portfolio-Based Conjectures About Financial Instruments
2015-09-17	describer	Describe Data in R Using Common Descriptive Statistics
2015-09-17	multirich	Calculate Multivariate Richness via UTC and sUTC
2015-09-17	pro	Point-Process Response Model for Optogenetics
2015-09-17	Rlof	R Parallel Implementation of Local Outlier Factor(LOF)
2015-09-17	spatialprobit	Spatial Probit Models
2015-09-16	discreteRV	Create and Manipulate Discrete Random Variables
2015-09-16	huge	High-Dimensional Undirected Graph Estimation
2015-09-16	JPEN	Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty
2015-09-16	peptider	Evaluation of Diversity in Nucleotide Libraries
2015-09-16	readMzXmlData	Reads Mass Spectrometry Data in mzXML Format
2015-09-16	TestingSimilarity	Bootstrap Test for Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation
2015-09-15	bclust	Bayesian Hierarchical Clustering Using Spike and Slab Models
2015-09-15	cpgen	Parallelized Genomic Prediction and GWAS
2015-09-15	lgarch	Simulation and Estimation of Log-GARCH Models
2015-09-15	OptGS	Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes
2015-09-14	AutoregressionMDE	Minimum Distance Estimation in Autoregressive Model
2015-09-14	LinearRegressionMDE	Minimum Distance Estimation in Linear Regression Model
2015-09-13	ESKNN	Ensemble of Subset of K-Nearest Neighbours Classifiers for Classification and Class Membership Probability Estimation
2015-09-13	LGRF	Set-Based Tests for Genetic Association in Longitudinal Studies
2015-09-12	GenOrd	Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions
2015-09-11	cmrutils	Misc Functions of the Center for the Mathematical Research
2015-09-11	hashids	Generate Short Unique YouTube-Like IDs (Hashes) from Integers
2015-09-11	hindexcalculator	H-Index Calculator using Data from a Web of Science (WoS) Citation Report
2015-09-11	regRSM	Random Subspace Method (RSM) for Linear Regression
2015-09-11	spatialfil	Application of 2D Convolution Kernel Filters to Matrices or 3D Arrays
2015-09-11	xseq	Assessing Functional Impact on Gene Expression of Mutations in Cancer
2015-09-10	acmeR	Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines
2015-09-10	ThreeGroups	ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments
2015-09-10	tm.plugin.dc	Text Mining Distributed Corpus Plug-In
2015-09-09	geometry	Mesh Generation and Surface Tesselation
2015-09-09	mfp	Multivariable Fractional Polynomials
2015-09-09	onls	Orthogonal Nonlinear Least-Squares Regression
2015-09-09	pla	Parallel Line Assays
2015-09-09	profilr	Quickly Profile Data in R
2015-09-09	rprintf	Adaptive Builder for Formatted Strings
2015-09-09	StatRank	Statistical Rank Aggregation: Inference, Evaluation, and Visualization
2015-09-08	anonymizer	Anonymize Data Containing Personally Identifiable Information
2015-09-08	ftsspec	Spectral Density Estimation and Comparison for Functional Time Series
2015-09-08	prim	Patient Rule Induction Method (PRIM)
2015-09-08	weatherr	Tools for Handling and Scrapping Instant Weather Forecast Feeds
2015-09-07	BioMark	Find Biomarkers in Two-Class Discrimination Problems
2015-09-07	brr	Bayesian Inference on the Ratio of Two Poisson Rates
2015-09-07	FAdist	Distributions that are Sometimes Used in Hydrology
2015-09-07	geiger	Analysis of Evolutionary Diversification
2015-09-07	mlsjunkgen	Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers
2015-09-07	phonenumber	Convert Letters to Numbers and Back as on a Telephone Keypad
2015-09-07	spinyReg	Sparse Generative Model and Its EM Algorithm
2015-09-07	ThreeWay	Three-Way Component Analysis
2015-09-06	evobiR	Comparative and Population Genetic Analyses
2015-09-06	GeoLight	Analysis of Light Based Geolocator Data
2015-09-05	ACSWR	A Companion Package for the Book "A Course in Statistics with R"
2015-09-05	PabonLasso	Pabon Lasso Graphs and Comparing Situations of a Unit in Two Different Times
2015-09-05	RoughSets	Data Analysis Using Rough Set and Fuzzy Rough Set Theories
2015-09-04	DoubleExpSeq	Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
2015-09-04	edesign	Maximum Entropy Sampling
2015-09-04	IASD	Model Selection for Index of Asymmetry Distribution
2015-09-04	ICC.Sample.Size	Calculation of Sample Size and Power for ICC
2015-09-04	sgt	Skewed Generalized T Distribution Tree
2015-09-03	DAAG	Data Analysis and Graphics Data and Functions
2015-09-03	influenceR	Software Tools to Quantify Structural Importance of Nodes in a Network
2015-09-03	invLT	Inversion of Laplace-Transformed Functions
2015-09-03	LifeHist	Life History Models of Individuals
2015-09-02	EasyABC	Efficient Approximate Bayesian Computation Sampling Schemes
2015-09-02	functools	Functional Programming in R
2015-09-02	IalsaSynthesis	Synthesizing Information Across Collaborating Research
2015-09-02	ParetoPosStable	Computing, Fitting and Validating the PPS Distribution
2015-09-02	valottery	Results from the Virginia Lottery Draw Games
2015-09-01	ash	David Scott's ASH Routines
2015-09-01	classGraph	Construct Graphs of S4 Class Hierarchies
2015-09-01	eel	Extended Empirical Likelihood
2015-08-31	abodOutlier	Angle-Based Outlier Detection
2015-08-31	MIXFIM	Evaluation of the FIM in NLMEMs using MCMC
2015-08-31	titanic	Titanic Passenger Survival Data Set
2015-08-31	ZRA	Dynamic Plots for Time Series Forecasting
2015-08-30	class	Functions for Classification
2015-08-30	spatial	Functions for Kriging and Point Pattern Analysis
2015-08-29	dml	Distance Metric Learning in R
2015-08-29	FlexParamCurve	Tools to Fit Flexible Parametric Curves
2015-08-28	ALTopt	Optimal Experimental Designs for Accelerated Life Testing
2015-08-28	cacIRT	Classification Accuracy and Consistency under Item Response Theory
2015-08-28	detector	Detect Data Containing Personally Identifiable Information
2015-08-28	erboost	Nonparametric Multiple Expectile Regression via ER-Boost
2015-08-28	KERE	Expectile Regression in Reproducing Kernel Hilbert Space
2015-08-28	kin.cohort	Analysis of Kin-Cohort Studies
2015-08-28	lookupTable	Look-Up Tables using S4
2015-08-28	tmvtnorm	Truncated Multivariate Normal and Student t Distribution
2015-08-28	trimr	An Implementation of Common Response Time Trimming Methods
2015-08-27	intervals	Tools for Working with Points and Intervals
2015-08-27	support.CEs	Basic Functions for Supporting an Implementation of Choice Experiments
2015-08-26	ArArRedux	Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
2015-08-26	FastBandChol	Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor
2015-08-26	generator	Generate Data Containing Fake Personally Identifiable Information
2015-08-26	SDDE	Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks
2015-08-25	bimixt	Estimates Mixture Models for Case-Control Data
2015-08-25	compare	Comparing Objects for Differences
2015-08-25	contoureR	Contouring of Non-Regular Three-Dimensional Data
2015-08-25	fptdApprox	Approximation of First-Passage-Time Densities for Diffusion Processes
2015-08-25	ggplot2movies	Movies Data
2015-08-25	ONETr	Efficient Authenticated Interaction with the O*NET API
2015-08-25	optismixture	Optimal Mixture Weights in Multiple Importance Sampling
2015-08-25	SACOBRA	Self-Adjusting COBRA
2015-08-23	AutoModel	Automated Hierarchical Multiple Regression with Assumptions Checking
2015-08-23	GUIProfiler	Graphical User Interface for Rprof()
2015-08-23	qrcode	QRcode Generator for R
2015-08-23	R2jags	Using R to Run 'JAGS'
2015-08-23	snn	Stabilized Nearest Neighbor Classifier
2015-08-23	stocc	Fit a Spatial Occupancy Model via Gibbs Sampling
2015-08-22	blmeco	Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
2015-08-22	MatrixModels	Modelling with Sparse And Dense Matrices
2015-08-21	ifs	Iterated Function Systems
2015-08-21	NNTbiomarker	Calculate Design Parameters for Biomarker Validation Studies
2015-08-21	rsggm	Robust Sparse Gaussian Graphical Modeling via the Gamma-Divergence
2015-08-21	tvm	Time Value of Money Functions
2015-08-20	BlakerCI	Blaker's Binomial Confidence Limits
2015-08-20	GEVStableGarch	ARMA-GARCH/APARCH Models with GEV and Stable Distributions
2015-08-20	weirs	A Hydraulics Package to Compute Open-Channel Flow over Weirs
2015-08-19	LifeTables	Two-Parameter HMD Model Life Table System
2015-08-19	MetaSKAT	Meta Analysis for SNP-Set (Sequence) Kernel Association Test
2015-08-19	MLDS	Maximum Likelihood Difference Scaling
2015-08-19	REGENT	Risk Estimation for Genetic and Environmental Traits
2015-08-19	spsi	Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
2015-08-19	STI	Calculation of the Standardized Temperature Index
2015-08-19	trajectories	Classes and Methods for Trajectory Data
2015-08-18	ipw	Estimate Inverse Probability Weights
2015-08-17	GeneralOaxaca	Blinder-Oaxaca Decomposition for Generalized Linear Model
2015-08-17	LotkasLaw	Runs Lotka's Law which is One of the Special Applications of Zipf's Law
2015-08-17	mixedMem	Tools for Discrete Multivariate Mixed Membership Models
2015-08-16	A3	Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
2015-08-14	bootES	Bootstrap Effect Sizes
2015-08-14	diffIRT	Diffusion IRT Models for Response and Response Time Data
2015-08-13	ART	Aligned Rank Transform for Nonparametric Factorial Analysis
2015-08-13	geospt	Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
2015-08-13	QuantifQuantile	Estimation of Conditional Quantiles using Optimal Quantization
2015-08-12	creditr	Credit Default Swaps in R
2015-08-12	hoa	Higher Order Likelihood Inference
2015-08-12	MDimNormn	Multi-Dimensional MA Normalization for Plate Effect
2015-08-12	MethylCapSig	Detection of Differentially Methylated Regions using MethylCap-Seq Data
2015-08-12	mmc	Multivariate Measurement Error Correction
2015-08-11	praise	Praise Users
2015-08-11	RateDistortion	Routines for Solving Rate-Distortion Problems
2015-08-11	restlos	Robust Estimation of Location and Scatter
2015-08-10	cusp	Cusp-Catastrophe Model Fitting Using Maximum Likelihood
2015-08-10	MixMAP	Implements the MixMAP Algorithm
2015-08-10	ocomposition	Regression for Rank-Indexed Compositional Data
2015-08-10	slfm	Tools for Fitting Sparse Latent Factor Model
2015-08-10	TapeR	Flexible Tree Taper Curves Based on Semiparametric Mixed Models
2015-08-10	threg	Threshold Regression
2015-08-09	perspectev	Permutation of Species During Turnover Events
2015-08-09	rafalib	Convenience Functions for Routine Data Exploration
2015-08-08	threewords	Represent Precise Coordinates in Three Words
2015-08-07	pid	Process Improvement using Data
2015-08-06	BMhyd	PCM for Hybridization
2015-08-06	CTTShiny	Classical Test Theory via Shiny
2015-08-06	hashr	Hash R Objects to Integers Fast
2015-08-06	HiClimR	Hierarchical Climate Regionalization
2015-08-06	LFDR.MLE	Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation
2015-08-05	credule	Credit Default Swap Functions
2015-08-05	PCA4TS	Segmenting Multiple Time Series by Contemporaneous Linear Transformation
2015-08-05	sdwd	Sparse Distance Weighted Discrimination
2015-08-05	W2CWM2C	A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis
2015-08-04	BenfordTests	Statistical Tests for Evaluating Conformity to Benford's Law
2015-08-04	dr	Methods for Dimension Reduction for Regression
2015-08-04	yakmoR	A Simple Wrapper for the k-Means Library Yakmo
2015-08-03	ALS	Multivariate Curve Resolution Alternating Least Squares (MCR-ALS)
2015-08-03	kinship2	Pedigree Functions
2015-08-03	taber	Split and Recombine Your Data
2015-08-03	transcribeR	Automated Transcription of Audio Files Through the HP IDOL API
2015-08-02	fast	Implementation of the Fourier Amplitude Sensitivity Test (FAST)
2015-08-02	GeneNet	Modeling and Inferring Gene Networks
2015-08-01	gendist	Generated Probability Distribution Models
2015-07-31	Harvest.Tree	Harvest the Classification Tree
2015-07-31	IsoGene	Order-Restricted Inference for Microarray Experiments
2015-07-31	MRQoL	Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life
2015-07-31	multcompView	Visualizations of Paired Comparisons
2015-07-31	nlstools	Tools for Nonlinear Regression Analysis
2015-07-31	ORCME	Order Restricted Clustering for Microarray Experiments
2015-07-31	OTE	Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation
2015-07-31	phonTools	Tools for Phonetic and Acoustic Analyses
2015-07-31	rpca	RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components
2015-07-30	nortest	Tests for Normality
2015-07-30	R2WinBUGS	Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
2015-07-30	signal	Signal Processing
2015-07-29	ClamR	Time Series Modeling for Climate Change Proxies
2015-07-29	FastRWeb	Fast Interactive Framework for Web Scripting Using R
2015-07-29	HistogramTools	Utility Functions for R Histograms
2015-07-29	Pade	Padé Approximant Coefficients
2015-07-29	pco	Panel Cointegration Tests
2015-07-29	pweight	P-Value Weighting
2015-07-29	Rgnuplot	R Interface for Gnuplot
2015-07-29	RRNA	Secondary Structure Plotting for RNA
2015-07-29	twitteR	R Based Twitter Client
2015-07-29	webuse	Import Stata 'webuse' Datasets
2015-07-29	wiod	World Input Output Database 1995-2011
2015-07-28	base64enc	Tools for base64 encoding
2015-07-28	cpm	Sequential and Batch Change Detection Using Parametric and Nonparametric Methods
2015-07-28	MVA	An Introduction to Applied Multivariate Analysis with R
2015-07-28	QFRM	Pricing of Vanilla and Exotic Option Contracts
2015-07-28	RSclient	Client for Rserve
2015-07-28	uuid	Tools for generating and handling of UUIDs
2015-07-28	woe	Computes Weight of Evidence and Information Values
2015-07-27	dcGOR	Analysis of Ontologies and Protein Domain Annotations
2015-07-27	momr	Mining Metaomics Data (MetaOMineR)
2015-07-27	phyext2	An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'
2015-07-27	qrage	Tools that Create D3 JavaScript Force Directed Graph from R
2015-07-27	rddtools	Toolbox for Regression Discontinuity Design ('RDD')
2015-07-27	spectrino	Spectra Visualization, Organizer and Data Preparation
2015-07-24	isotone	Active Set and Generalized PAVA for Isotone Optimization
2015-07-24	modMax	Community Structure Detection via Modularity Maximization
2015-07-24	rEMM	Extensible Markov Model for Modelling Temporal Relationships Between Clusters
2015-07-24	RKlout	Fetch Klout Scores for Twitter Users
2015-07-23	BayesComm	Bayesian Community Ecology Analysis
2015-07-23	EstHer	Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection
2015-07-23	mixPHM	Mixtures of Proportional Hazard Models
2015-07-23	RaschSampler	Rasch Sampler
2015-07-23	saturnin	Spanning Trees Used for Network Inference
2015-07-23	SparseFactorAnalysis	Scaling Count and Binary Data with Sparse Factor Analysis
2015-07-22	EMMREML	Fitting Mixed Models with Known Covariance Structures
2015-07-22	favnums	A Dataset of Favourite Numbers
2015-07-22	hybridHclust	Hybrid Hierarchical Clustering
2015-07-22	mri	Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted Rand Index (1 and 2.1 and 2.2)
2015-07-22	PlotPrjNetworks	Useful Networking Tools for Project Management
2015-07-20	far	Modelization for Functional AutoRegressive Processes
2015-07-20	nbconvertR	Vignette Engine Wrapping IPython Notebooks
2015-07-20	PTAk	Principal Tensor Analysis on k Modes
2015-07-20	RTDE	Robust Tail Dependence Estimation
2015-07-20	SeqGrapheR	Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads
2015-07-19	anoint	Analysis of Interactions
2015-07-19	glmgraph	Graph-Constrained Regularization for Sparse Generalized Linear Models
2015-07-19	nordklimdata1	Dataset for Climate Analysis with Data from the Nordic Region
2015-07-19	thermocouple	Temperature Measurement with Thermocouples, RTD and IC Sensors
2015-07-18	kappalab	Non-Additive Measure and Integral Manipulation Functions
2015-07-18	lpbrim	LP-BRIM Bipartite Modularity
2015-07-18	RAHRS	Data Fusion Filters for Attitude Heading Reference System (AHRS) with Several Variants of the Kalman Filter and the Mahoney and Madgwick Filters
2015-07-17	EDFIR	Estimating Discrimination Factors
2015-07-17	gamlss.demo	Demos for GAMLSS
2015-07-17	RSpincalc	Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors
2015-07-16	captioner	Numbers Figures and Creates Simple Captions
2015-07-16	efflog	The Causal Effects for a Causal Loglinear Model
2015-07-16	ibelief	Belief Function Implementation
2015-07-16	rtiff	Read and Write TIFF Files
2015-07-15	deducorrect	Deductive Correction, Deductive Imputation, and Deterministic Correction
2015-07-15	kfigr	Integrated Code Chunk Anchoring and Referencing for R Markdown Documents
2015-07-15	locfdr	Computes Local False Discovery Rates
2015-07-15	ROMIplot	Plots Surfaces of Rates of Mortality Improvement
2015-07-15	ROptimizely	R Optimizely API
2015-07-15	verification	Weather Forecast Verification Utilities
2015-07-14	decode	Differential Co-Expression and Differential Expression Analysis
2015-07-14	HBglm	Hierarchical Bayesian Regression for GLMs
2015-07-14	recommenderlabBX	Book-Crossing Dataset (BX) for 'recommenderlab'
2015-07-14	SoundexBR	Phonetic-Coding for Portuguese
2015-07-13	bootLR	Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
2015-07-13	dynpred	Companion Package to "Dynamic Prediction in Clinical Survival Analysis"
2015-07-13	EstCRM	Calibrating Parameters for the Samejima's Continuous IRT Model
2015-07-13	igraphdata	A Collection of Network Data Sets for the 'igraph' Package
2015-07-13	prettyunits	Pretty, Human Readable Formatting of Quantities
2015-07-13	spareserver	Client Side Load Balancing
2015-07-12	appnn	Amyloid Propensity Prediction Neural Network
2015-07-12	fame	Interface for FAME Time Series Database
2015-07-12	MatchLinReg	Combining Matching and Linear Regression for Causal Inference
2015-07-12	WMCapacity	GUI Implementing Bayesian Working Memory Models
2015-07-11	operators	Additional Binary Operators
2015-07-11	penalizedLDA	Penalized Classification using Fisher's Linear Discriminant
2015-07-10	recoder	A Simple and Flexible Recoder
2015-07-10	RJaCGH	Reversible Jump MCMC for the Analysis of CGH Arrays
2015-07-10	scout	Implements the Scout Method for Covariance-Regularized Regression
2015-07-10	selectspm	Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit
2015-07-09	Biodem	Biodemography Functions
2015-07-09	downloader	Download Files over HTTP and HTTPS
2015-07-09	penDvine	Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines
2015-07-08	allanvar	Allan Variance Analysis
2015-07-08	aTSA	Alternative Time Series Analysis
2015-07-08	bigGP	Distributed Gaussian Process Calculations
2015-07-08	binda	Multi-Class Discriminant Analysis using Binary Predictors
2015-07-08	cccrm	Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
2015-07-08	crossval	Generic Functions for Cross Validation
2015-07-08	fdrtool	Estimation of (Local) False Discovery Rates and Higher Criticism
2015-07-08	GSM	Gamma Shape Mixture
2015-07-08	HWEintrinsic	Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem
2015-07-08	LogisticDx	Diagnostic Tests for Models with a Binomial Response
2015-07-08	longitudinal	Analysis of Multiple Time Course Data
2015-07-08	mederrRank	Bayesian Methods for Identifying the Most Harmful Medication Errors
2015-07-08	PopVar	Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation
2015-07-08	sda	Shrinkage Discriminant Analysis and CAT Score Variable Selection
2015-07-08	spatialCovariance	Computation of Spatial Covariance Matrices for Data on Rectangles
2015-07-08	sperich	Auxiliary Functions to Estimate Centers of Biodiversity
2015-07-08	st	Shrinkage t Statistic and Correlation-Adjusted t-Score
2015-07-08	StatDataML	Read and Write StatDataML Files
2015-07-08	tailloss	Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution
2015-07-08	tspmeta	Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem
2015-07-08	vardiag	Variogram Diagnostics
2015-07-08	wskm	Weighted k-Means Clustering
2015-07-07	futile.any	A Tiny Utility Providing Polymorphic Operations
2015-07-07	SocialPosition	Social Position Indicators Construction Toolbox
2015-07-06	iBATCGH	Integrative Bayesian Analysis of Transcriptomic and CGH Data
2015-07-05	baseline	Baseline Correction of Spectra
2015-07-05	gromovlab	Gromov-Hausdorff Type Distances for Labeled Metric Spaces
2015-07-05	rredis	"Redis" Key/Value Database Client
2015-07-04	forams	Foraminifera and Community Ecology Analyses
2015-07-04	Interatrix	Compute Chi-Square Measures with Corrections
2015-07-04	kinfit	Routines for Fitting Kinetic Models to Chemical Degradation Data
2015-07-04	nat.utils	File System Utility Functions for 'NeuroAnatomy Toolbox'
2015-07-04	OrdFacReg	Least Squares, Logistic, and Cox-Regression with Ordered Predictors
2015-07-04	reporttools	Generate LaTeX Tables of Descriptive Statistics
2015-07-04	trust	Trust Region Optimization
2015-07-03	abd	The Analysis of Biological Data
2015-07-03	DSL	Distributed Storage and List
2015-07-03	hive	Hadoop InteractiVE
2015-07-03	logcondiscr	Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations
2015-07-03	modehunt	Multiscale Analysis for Density Functions
2015-07-03	powerGWASinteraction	Power Calculations for GxE and GxG Interactions for GWAS
2015-07-03	rseedcalc	Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing
2015-07-03	selectMeta	Estimation of Weight Functions in Meta Analysis
2015-07-03	spd	Semi Parametric Distribution
2015-07-03	tagcloud	Tag Clouds
2015-07-02	arulesNBMiner	Mining NB-Frequent Itemsets and NB-Precise Rules
2015-07-02	autoencoder	Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data
2015-07-02	gsscopu	Copula Density and 2-D Hazard Estimation using Smoothing Splines
2015-07-02	NHANES	Data from the US National Health and Nutrition Examination Study
2015-07-02	SRCS	Statistical Ranking Color Scheme for Multiple Pairwise Comparisons
2015-07-02	translation.ko	R Manuals Literally Translated in Korean
2015-07-01	bayesmix	Bayesian Mixture Models with JAGS
2015-07-01	CompR	Paired Comparison Data Analysis
2015-07-01	MiRSEA	'MicroRNA' Set Enrichment Analysis
2015-07-01	spectralGP	Approximate Gaussian Processes Using the Fourier Basis
2015-06-30	Maeswrap	Wrapper Functions for MAESTRA/MAESPA
2015-06-29	ddeploy	Wrapper for the Duke Deploy REST API
2015-06-29	gee	Generalized Estimation Equation Solver
2015-06-29	KernSmooth	Functions for Kernel Smoothing Supporting Wand & Jones (1995)
2015-06-28	cvxbiclustr	Convex Biclustering Algorithm
2015-06-27	ElemStatLearn	Data Sets, Functions and Examples from the Book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman
2015-06-27	knitLatex	'Knitr' Helpers - Mostly Tables
2015-06-27	LncMod	Predicting Modulator and Functional/Survival Analysis
2015-06-26	asypow	Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
2015-06-26	parallelML	A Parallel-Voting Algorithm for many Classifiers
2015-06-26	parallelSVM	A Parallel-Voting Version of the Support-Vector-Machine Algorithm
2015-06-26	SenSrivastava	Datasets from Sen & Srivastava
2015-06-26	sorvi	Finnish Open Government Data Toolkit
2015-06-26	TSMining	Mining Univariate and Multivariate Motifs in Time-Series Data
2015-06-26	unbalanced	Racing for Unbalanced Methods Selection
2015-06-25	learnstats	An Interactive Environment for Learning Statistics
2015-06-25	XMRF	Markov Random Fields for High-Throughput Genetics Data
2015-06-24	BSGS	Bayesian Sparse Group Selection
2015-06-24	ColorPalette	Color Palettes Generator
2015-06-24	EpiBayes	Implements Hierarchical Bayesian Models for Epidemiological Applications
2015-06-24	geospacom	Facilitate Generating of Distance Matrices Used in Package 'spacom' and Plotting Data on Maps
2015-06-24	pscore	Standardizing Physiological Composite Risk Endpoints
2015-06-24	runittotestthat	Convert 'RUnit' Test Functions into 'testthat' Tests
2015-06-23	geosptdb	Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression
2015-06-23	pcaBootPlot	Create 2D Principal Component Plots with Bootstrapping
2015-06-23	selfea	Select Features Reliably with Cohen's Effect Sizes
2015-06-23	ssanv	Sample Size Adjusted for Nonadherence or Variability of Input Parameters
2015-06-22	biplotbootGUI	Bootstrap on Classical Biplots and Clustering Disjoint Biplot
2015-06-22	import	An Import Mechanism for R
2015-06-22	primes	Generate and Test for Prime Numbers
2015-06-22	rAvis	Interface to the Bird-Watching Dataset Proyecto AVIS
2015-06-22	sbmSDP	Semidefinite Programming for Fitting Block Models of Equal Block Sizes
2015-06-21	cncaGUI	Canonical Non-Symmetrical Correspondence Analysis in R
2015-06-21	FAMILY	A Convex Formulation for Modeling Interactions with Strong Heredity
2015-06-20	crrp	Penalized Variable Selection in Competing Risks Regression
2015-06-19	multibiplotGUI	Multibiplot Analysis in R
2015-06-19	Sejong	KoNLP static dictionaries and Sejong project resources
2015-06-18	GPLTR	Generalized Partially Linear Tree-Based Regression Model
2015-06-18	james.analysis	Analysis Tools for the 'JAMES' Framework
2015-06-17	ICC	Facilitating Estimation of the Intraclass Correlation Coefficient
2015-06-17	MM2Sdata	Gene Expression Datasets for the 'MM2S' Package
2015-06-16	CommT	Comparative Phylogeographic Analysis using the Community Tree Framework
2015-06-16	gridGraphviz	Drawing Graphs with 'grid'
2015-06-16	repijson	Tools for Handling EpiJSON (Epidemiology Data) Files
2015-06-16	TMDb	Access to TMDb API - Apiary
2015-06-15	BaBooN	Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
2015-06-15	DiceDesign	Designs of Computer Experiments
2015-06-15	DiceEval	Construction and Evaluation of Metamodels
2015-06-15	kolmim	An Improved Evaluation of Kolmogorov's Distribution
2015-06-15	MSIseq	Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations
2015-06-15	rfigshare	An R Interface to 'figshare'
2015-06-15	sgRSEA	Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
2015-06-14	blme	Bayesian Linear Mixed-Effects Models
2015-06-13	hierband	Convex Banding of the Covariance Matrix
2015-06-12	nodeHarvest	Node Harvest for Regression and Classification
2015-06-12	strum	STRUctural Modeling of Latent Variables for General Pedigree
2015-06-11	EntropyExplorer	Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression
2015-06-11	ergm.graphlets	ERG Modeling Based on Graphlet Properties
2015-06-11	LTPDvar	LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables
2015-06-10	P2C2M	Posterior Predictive Checks of Coalescent Models
2015-06-10	parallelMap	Unified Interface to Parallelization Back-Ends
2015-06-10	ssfa	Spatial Stochastic Frontier Analysis
2015-06-09	DNMF	Discriminant Non-Negative Matrix Factorization
2015-06-09	patchDVI	Package to Patch .dvi or .synctex Files
2015-06-09	RcppFaddeeva	'Rcpp' Bindings for the 'Faddeeva' Package
2015-06-09	rknn	Random KNN Classification and Regression
2015-06-07	ISwR	Introductory Statistics with R
2015-06-06	BayesGESM	Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models
2015-06-06	nestedRanksTest	Mann-Whitney-Wilcoxon Test for Nested Ranks
2015-06-06	strucchange	Testing, Monitoring, and Dating Structural Changes
2015-06-05	seismic	Predict Information Cascade by Self-Exciting Point Process
2015-06-04	kineticF	Framework for the Analysis of Kinetic Visual Field Data
2015-06-03	delt	Estimation of Multivariate Densities Using Adaptive Partitions
2015-06-03	EnviroStat	Statistical Analysis of Environmental Space-Time Processes
2015-06-03	kwb.hantush	Calculation of Groundwater Mounding Beneath an Infiltration Basin
2015-06-03	score	A Package to Score Behavioral Questionnaires
2015-06-03	surveyeditor	Generate a Survey that can be Completed by Survey Respondents
2015-06-03	XHWE	X Chromosome Hardy-Weinberg Equilibrium
2015-06-02	bootSVD	Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
2015-06-02	cccd	Class Cover Catch Digraphs
2015-06-02	evolvability	Calculation of Evolvability Parameters
2015-06-02	FAOSTAT	Download Data from the FAOSTAT Database of the Food and Agricultural Organization (FAO) of the United Nations
2015-06-02	HapEstXXR	Multi-Locus Stepwise Regression
2015-06-02	JBTools	Misc Small Tools and Helper Functions for Other Code of J. Buttlar
2015-06-02	spanel	Spatial Panel Data Models
2015-06-02	spectral.methods	Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
2015-06-01	dkDNA	Diffusion Kernels on a Set of Genotypes
2015-06-01	Iso	Functions to Perform Isotonic Regression
2015-05-31	coefficientalpha	Robust Coefficient Alpha and Omega with Missing and Non-Normal Data
2015-05-31	TDAmapper	Analyze High-Dimensional Data Using Discrete Morse Theory
2015-05-30	hybridEnsemble	Build, Deploy and Evaluate Hybrid Ensembles
2015-05-30	RcellData	Example Dataset for 'Rcell' Package
2015-05-30	signmedian.test	Perform Exact Sign Test and Asymptotic Sign Test in Large Samples
2015-05-29	dostats	Compute Statistics Helper Functions
2015-05-29	esaBcv	Estimate Number of Latent Factors and Factor Matrix for Factor Analysis
2015-05-29	fdakma	Functional Data Analysis: K-Mean Alignment
2015-05-29	ncdf.tools	Easier 'NetCDF' File Handling
2015-05-29	rprime	Functions for Working with 'Eprime' Text Files
2015-05-29	RSPS	RNA-Seq Power Simulation
2015-05-28	loopr	Uses an Archive to Amend Previous Stages of a Pipe using Current Output
2015-05-28	packS4	Toy Example of S4 Package
2015-05-27	BACA	Bubble Chart to Compare Biological Annotations by using DAVID
2015-05-27	empiricalFDR.DESeq2	Simulation-Based False Discovery Rate in RNA-Seq
2015-05-26	reval	Repeated Function Evaluation for Sensitivity Analysis
2015-05-23	restimizeapi	Functions for Working with the 'www.estimize.com' Web Services
2015-05-22	bcv	Cross-Validation for the SVD (Bi-Cross-Validation)
2015-05-22	dataview	Data and Workspace Browser for Terminals
2015-05-22	denpro	Visualization of Multivariate Functions, Sets, and Data
2015-05-22	frbs	Fuzzy Rule-Based Systems for Classification and Regression Tasks
2015-05-22	tmle.npvi	Targeted Learning of a NP Importance of a Continuous Exposure
2015-05-21	LDPD	Probability of Default Calibration
2015-05-21	ordPens	Selection and/or Smoothing of Ordinal Predictors
2015-05-21	R0	Estimation of R0 and Real-Time Reproduction Number from Epidemics
2015-05-21	riceware	A Diceware Passphrase Implementation
2015-05-21	xtermStyle	Terminal Text Formatting Using Escape Sequences
2015-05-20	ARTIVA	Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme VArying) Model
2015-05-20	bigml	Bindings for the BigML API
2015-05-20	CausalFX	Methods for Estimating Causal Effects from Observational Data
2015-05-20	clustertend	Check the Clustering Tendency
2015-05-20	shapeR	Collection and Analysis of Otolith Shape Data
2015-05-20	SubpathwayGMir	Identify Metabolic Subpathways Mediated by MicroRNAs
2015-05-20	TickExec	Execution Functions for Tick Data Back Test
2015-05-20	VIGoR	Variational Bayesian Inference for Genome-Wide Regression
2015-05-19	greyzoneSurv	Fit a Grey-Zone Model with Survival Data
2015-05-19	QCAfalsePositive	Tests for Type I Error in Qualitative Comparative Analysis (QCA)
2015-05-19	rivervis	River Visualisation Tool
2015-05-18	MInt	Learn Direct Interaction Networks
2015-05-18	ocedata	Oceanographic Datasets for Oce
2015-05-18	supcluster	Supervised Cluster Analysis
2015-05-16	TTmoment	Sampling and Calculating the First and Second Moments for the Doubly Truncated Multivariate t Distribution
2015-05-15	CatDyn	Fishery Stock Assessment by Generalized Depletion Models
2015-05-15	NEff	Calculating Effective Sizes Based on Known Demographic Parameters of a Population
2015-05-15	pmr	Probability Models for Ranking Data
2015-05-15	rsem	Robust Structural Equation Modeling with Missing Data and Auxiliary Variables
2015-05-14	geoscale	Geological Time Scale Plotting
2015-05-14	MCTM	Markov Chains Transition Matrices
2015-05-13	stackoverflow	Stack Overflow's Greatest Hits
2015-05-12	DSviaDRM	Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms
2015-05-12	fastHICA	Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis
2015-05-12	stagePop	Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
2015-05-11	boilerpipeR	Interface to the Boilerpipe Java Library
2015-05-11	GB2	Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation
2015-05-11	hapassoc	Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm
2015-05-11	mglmn	Model Averaging for Multivariate GLM with Null Models
2015-05-11	probFDA	Probabilistic Fisher Discriminant Analysis
2015-05-11	tm.plugin.webmining	Retrieve Structured, Textual Data from Various Web Sources
2015-05-10	csn	Closed Skew-Normal Distribution
2015-05-09	aprean3	Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
2015-05-08	asVPC	Average Shifted Visual Predictive Checks
2015-05-08	lsa	Latent Semantic Analysis
2015-05-07	dummy	Automatic Creation of Dummies with Support for Predictive Modeling
2015-05-07	fishmove	Prediction of Fish Movement Parameters
2015-05-07	RImageJROI	Read 'ImageJ' Region of Interest (ROI) Files
2015-05-06	Scale	Likert Type Questionnaire Item Analysis
2015-05-05	abc	Tools for Approximate Bayesian Computation (ABC)
2015-05-05	abc.data	Data Only: Tools for Approximate Bayesian Computation (ABC)
2015-05-05	hiertest	Convex Hierarchical Testing of Interactions
2015-05-05	LocFDRPois	Functions for Performing Local FDR Estimation when Null and Alternative are Poisson
2015-05-05	optifunset	Set Options if Unset
2015-05-05	reGenotyper	Detecting Mislabeled Samples in Genetic Data
2015-05-05	structSSI	Multiple Testing for Hypotheses with Hierarchical or Group Structure
2015-05-04	clustering.sc.dp	Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
2015-05-04	parboost	Distributed Model-Based Boosting
2015-05-03	EW	Edgeworth Expansion
2015-05-02	coxinterval	Cox-Type Models for Interval-Censored Data
2015-05-02	EvalEst	Dynamic Systems Estimation - Extensions
2015-05-02	GDAdata	Datasets for the Book Graphical Data Analysis with R
2015-05-02	ig.vancouver.2014.topcolour	Instagram 2014 Vancouver Top Colour Dataset
2015-05-02	mixtNB	DE Analysis of RNA-Seq Data by Mixtures of NB
2015-05-02	muir	Exploring Data with Tree Data Structures
2015-05-02	survJamda.data	Data for Package 'survJambda'
2015-05-01	CDNmoney	Components of Canadian Monetary and Credit Aggregates
2015-05-01	TScompare	'TSdbi' Database Comparison
2015-05-01	tsfa	Time Series Factor Analysis
2015-05-01	uniftest	Tests for Uniformity
2015-04-30	bspec	Bayesian Spectral Inference
2015-04-30	constrainedKriging	Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging
2015-04-30	rCMA	R-to-Java Interface for 'CMA-ES'
2015-04-30	TSfame	'TSdbi' Extensions for Fame
2015-04-30	TSMySQL	'TSdbi' Extensions for 'MySQL'
2015-04-30	TSodbc	'TSdbi' Extensions for ODBC
2015-04-30	TSPostgreSQL	'TSdbi' Extensions for 'PostgreSQL'
2015-04-30	TSSQLite	'TSdbi' Extensions for 'SQLite'
2015-04-29	dcemriS4	A Package for Image Analysis of DCE-MRI (S4 Implementation)
2015-04-29	synbreedData	Data for the Synbreed Package
2015-04-29	uniqtag	Abbreviate Strings to Short, Unique Identifiers
2015-04-28	pairsD3	D3 Scatterplot Matrices
2015-04-28	simpleNeural	An Easy to Use Multilayer Perceptron
2015-04-28	timetree	Interface to the TimeTree of Life Webpage
2015-04-27	mded	Measuring the Difference Between Two Empirical Distributions
2015-04-27	migui	Graphical User Interface to the 'mi' Package
2015-04-27	seqDesign	Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints
2015-04-27	StatDA	Statistical Analysis for Environmental Data
2015-04-26	haplotypes	Haplotype Inference and Statistical Analysis of Genetic Variation
2015-04-24	DiceKriging	Kriging Methods for Computer Experiments
2015-04-23	LinRegInteractive	Interactive Interpretation of Linear Regression Models
2015-04-22	mapStats	Geographic Display of Survey Data Statistics
2015-04-22	probemod	Statistical Tools for Probing Moderation Effects
2015-04-22	treeperm	Exact and Asymptotic K Sample Permutation Test
2015-04-21	blockmodels	Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
2015-04-21	ensurer	Ensure Values at Runtime
2015-04-21	managelocalrepo	Manage a CRAN-Style Local Repository
2015-04-20	bayescount	Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
2015-04-20	oro.dicom	Rigorous - DICOM Input / Output
2015-04-20	prevalence	Tools for Prevalence Assessment Studies
2015-04-20	synRNASeqNet	Synthetic RNA-Seq Network Generation and Mutual Information Estimates
2015-04-19	BNPTSclust	A Bayesian Nonparametric Algorithm for Time Series Clustering
2015-04-19	R1magic	Compressive Sampling: Sparse Signal Recovery Utilities
2015-04-18	BivarP	Estimating the Parameters of Some Bivariate Distributions
2015-04-18	datacheck	Tools for Checking Data Consistency
2015-04-18	MATA	Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
2015-04-18	TKF	Pairwise Distance Estimation with TKF91 and TKF92 Model
2015-04-17	marl	Multivariate Analysis Based on Relative Likelihoods
2015-04-17	VLMC	Variable Length Markov Chains ('VLMC') Models
2015-04-16	dga	Capture-Recapture Estimation using Bayesian Model Averaging
2015-04-16	mi	Missing Data Imputation and Model Checking
2015-04-16	networksis	Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling
2015-04-16	qclust	Robust Estimation of Gaussian Mixture Models
2015-04-16	smoother	Functions Relating to the Smoothing of Numerical Data
2015-04-15	cernn	Covariance Estimation Regularized by Nuclear Norm Penalties
2015-04-15	REST	RcmdrPlugin Easy Script Templates
2015-04-15	rmaf	Refined Moving Average Filter
2015-04-15	SPRT	Wald's Sequential Probability Ratio Test
2015-04-14	bild	BInary Longitudinal Data
2015-04-14	CRTSize	Sample Size Estimation Functions for Cluster Randomized Trials
2015-04-14	MissMech	Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random
2015-04-13	fCertificates	Basics of Certificates and Structured Products Valuation
2015-04-13	HiLMM	Estimation of Heritability in Linear Mixed Models
2015-04-13	NbClust	Determining the Best Number of Clusters in a Data Set
2015-04-13	rstackdeque	Persistent Fast Amortized Stack and Queue Data Structures
2015-04-13	smds	Symbolic Multidimensional Scaling
2015-04-12	csrplus	Methods to Test Hypotheses on the Distribution of Spatial Point Processes
2015-04-12	heatmap3	An Improved Heatmap Package
2015-04-12	resample	Resampling Functions
2015-04-11	fdth	Frequency Distribution Tables, Histograms and Polygons
2015-04-11	lvm4net	Latent Variable Models for Networks
2015-04-11	msSurv	Nonparametric Estimation for Multistate Models
2015-04-10	BayesLCA	Bayesian Latent Class Analysis
2015-04-10	bentcableAR	Bent-Cable Regression for Independent Data or Autoregressive Time Series
2015-04-10	chipPCR	Toolkit of Helper Functions to Pre-Process Amplification Data
2015-04-09	expsmooth	Data Sets from "Forecasting with Exponential Smoothing"
2015-04-09	groupRemMap	Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty
2015-04-08	cqrReg	Quantile, Composite Quantile Regression and Regularized Versions
2015-04-08	searchable	Tools for Custom Searches / Subsets / Slices of Named R Objects
2015-04-08	softImpute	Matrix Completion via Iterative Soft-Thresholded SVD
2015-04-04	EFDR	Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
2015-04-04	SOUP	Stochastic Ordering Using Permutations (and Pairwise Comparisons)
2015-04-03	EcoSimR	Null Model Analysis for Ecological Data
2015-04-03	RKEA	R/KEA Interface
2015-04-03	thsls	Three-Stage Least Squares Estimation for Systems of Simultaneous Equations
2015-04-02	DiffCorr	Analyzing and Visualizing Differential Correlation Networks in Biological Data
2015-04-02	GPfit	Gaussian Processes Modeling
2015-04-02	HighDimOut	Outlier Detection Algorithms for High-Dimensional Data
2015-04-02	maptpx	MAP Estimation of Topic Models
2015-04-02	PermAlgo	Permutational Algorithm to Simulate Survival Data
2015-04-02	sybilccFBA	Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT)
2015-04-01	HarmonicRegression	Harmonic Regression to One or more Time Series
2015-04-01	KMDA	Kernel-Based Metabolite Differential Analysis
2015-04-01	Laterality	Functions to Calculate Common Laterality Statistics in Primatology
2015-03-31	MatchingFrontier	Computation of the Balance - Sample Size Frontier in Matching Methods for Causal Inference
2015-03-31	MethComp	Functions for Analysis of Agreement in Method Comparison Studies
2015-03-31	orthogonalsplinebasis	Orthogonal B-Spline Basis Functions
2015-03-31	shinyBS	Twitter Bootstrap Components for Shiny
2015-03-30	Ake	Associated Kernel Estimations
2015-03-30	VdgRsm	Plots of Scaled Prediction Variances for Response Surface Designs
2015-03-27	AutoSEARCH	General-to-Specific (GETS) Modelling
2015-03-27	LPStimeSeries	Learned Pattern Similarity and Representation for Time Series
2015-03-27	SAMUR	Stochastic Augmentation of Matched Data Using Restriction Methods
2015-03-27	StatMeasures	Easy Data Manipulation, Data Quality and Statistical Checks
2015-03-26	kmodR	K-Means with Simultaneous Outlier Detection
2015-03-26	ROCR	Visualizing the Performance of Scoring Classifiers
2015-03-25	timeROC	Time-Dependent ROC Curve and AUC for Censored Survival Data
2015-03-25	tumblR	Access to Tumblr v2 API
2015-03-24	mapfit	A Tool for PH/MAP Parameter Estimation
2015-03-24	rgexf	Build, Import and Export GEXF Graph Files
2015-03-23	mht	Multiple Hypothesis Testing for Variable Selection in High-Dimensional Linear Models
2015-03-22	psd	Adaptive, Sine-Multitaper Power Spectral Density Estimation
2015-03-20	hierDiversity	Hierarchical Multiplicative Partitioning of Complex Phenotypes
2015-03-20	prais	Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
2015-03-18	CARLIT	Ecological Quality Ratios Calculation and Plot
2015-03-18	jtrans	Johnson Transformation for Normality
2015-03-18	saccades	Detection of Fixations in Eye-Tracking Data
2015-03-17	DCluster	Functions for the Detection of Spatial Clusters of Diseases
2015-03-17	rsatscan	Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software
2015-03-17	staTools	Statistical Tools for Social Network Analysis
2015-03-16	genalg	R Based Genetic Algorithm
2015-03-16	gvcm.cat	Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs
2015-03-15	metaMix	Bayesian Mixture Analysis for Metagenomic Community Profiling
2015-03-15	separationplot	Separation Plots
2015-03-13	betas	Standardized Beta Coefficients
2015-03-13	boottol	Bootstrap Tolerance Levels for Credit Scoring Validation Statistics
2015-03-13	funFEM	Clustering in the Discriminative Functional Subspace
2015-03-12	GWAF	Genome-Wide Association/Interaction Analysis and Rare Variant Analysis with Family Data
2015-03-12	nparcomp	Multiple Comparisons and Simultaneous Confidence Intervals
2015-03-11	blatr	Send Emails Using 'Blat' for Windows
2015-03-11	MCL	Markov Cluster Algorithm
2015-03-11	multigroup	Multigroup Data Analysis
2015-03-11	NORRRM	Geochemical Toolkit for R
2015-03-10	binr	Cut Numeric Values into Evenly Distributed Groups
2015-03-10	EIAdata	R Wrapper for the Energy Information Administration (EIA) API
2015-03-10	relevent	Relational Event Models
2015-03-10	RVFam	Rare Variants Association Analyses with Family Data
2015-03-09	informR	Sequence Statistics for Relational Event Models
2015-03-08	csvread	Fast Specialized CSV File Loader
2015-03-07	SID	Structural Intervention Distance
2015-03-06	alabama	Constrained Nonlinear Optimization
2015-03-06	recluster	Ordination Methods for the Analysis of Beta-Diversity Indices
2015-03-05	CAM	Causal Additive Model (CAM)
2015-03-05	DAMOCLES	Dynamic Assembly Model of Colonization, Local Extinction and Speciation
2015-03-05	gtop	Game-Theoretically OPtimal (GTOP) Reconciliation Method
2015-03-04	abf2	Load Gap-Free Axon ABF2 Files
2015-03-04	monreg	Nonparametric Monotone Regression
2015-03-03	BayesSummaryStatLM	MCMC Sampling of Bayesian Linear Models via Summary Statistics
2015-03-03	BOG	Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions
2015-03-03	coalescentMCMC	MCMC Algorithms for the Coalescent
2015-03-03	FieldSim	Random Fields (and Bridges) Simulations
2015-03-03	hornpa	Horn's (1965) Test to Determine the Number of Components/Factors
2015-03-03	LPTime	LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling
2015-03-03	NAPPA	Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data
2015-03-03	NSUM	Network Scale Up Method
2015-03-03	RcmdrPlugin.EACSPIR	Plugin de R-Commander para el Manual 'EACSPIR'
2015-03-03	simMSM	Simulation of Event Histories for Multi-State Models
2015-03-03	stheoreme	Klimontovich's S-Theorem Algorithm Implementation and Data Preparation Tools
2015-03-02	IsingSampler	Sampling Methods and Distribution Functions for the Ising Model
2015-03-02	lsr	Companion to "Learning Statistics with R"
2015-03-02	PogromcyDanych	PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People
2015-03-01	Conake	Continuous Associated Kernel Estimation
2015-03-01	gendata	Generate and Modify Synthetic Datasets
2015-02-28	laketemps	Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009
2015-02-28	timma	Target Inhibition Interaction using Maximization and Minimization Averaging
2015-02-27	CoxRidge	Cox Models with Dynamic Ridge Penalties
2015-02-27	GenForImp	The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data
2015-02-26	dplRCon	Concordance for Dendroclimatology
2015-02-26	gte	Generalized Turnbull's Estimator
2015-02-26	RcmdrPlugin.ROC	Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
2015-02-26	SurvCorr	Correlation of Bivariate Survival Times
2015-02-25	aroma.apd	A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
2015-02-25	FGSG	Feature Grouping and Selection Over an Undirected Graph
2015-02-25	ihs	Inverse Hyperbolic Sine Distribution
2015-02-25	multiPIM	Variable Importance Analysis with Population Intervention Models
2015-02-25	SDD	Serial Dependence Diagrams
2015-02-24	assist	A Suite of R Functions Implementing Spline Smoothing Techniques
2015-02-24	autopls	Partial Least Squares Regression with Backward Selection of Predictors
2015-02-24	babar	Bayesian Bacterial Growth Curve Analysis in R
2015-02-24	coloredICA	Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis
2015-02-24	coxsei	Fitting a CoxSEI Model
2015-02-24	FFD	Freedom from Disease
2015-02-24	likelihood	Methods for Maximum Likelihood Estimation
2015-02-24	mwa	Causal Inference in Spatiotemporal Event Data
2015-02-24	phenability	Nonparametric Stability Analysis
2015-02-24	SvyNom	Nomograms for Right-Censored Outcomes from Survey Designs
2015-02-23	crrstep	Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
2015-02-23	games	Statistical Estimation of Game-Theoretic Models
2015-02-23	SurvLong	Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates
2015-02-23	wahc	Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model
2015-02-23	wmlf	Wavelet Leaders in Multifractal Analysis
2015-02-22	highTtest	Simultaneous Critical Values for t-Tests in Very High Dimensions
2015-02-22	protoclust	Hierarchical Clustering with Prototypes
2015-02-22	R.huge	Methods for Accessing Huge Amounts of Data [deprecated]
2015-02-22	ssize.fdr	Sample Size Calculations for Microarray Experiments
2015-02-21	frm	Regression Analysis of Fractional Responses
2015-02-21	lmeNBBayes	Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model
2015-02-20	faisalconjoint	Faisal Conjoint Model: A New Approach to Conjoint Analysis
2015-02-20	fastpseudo	Fast Pseudo Observations
2015-02-20	msda	Multi-Class Sparse Discriminant Analysis
2015-02-20	UBCRM	Functions to Simulate and Conduct Dose-Escalation Phase I Studies
2015-02-19	fgpt	Floating Grid Permutation Technique
2015-02-19	Simile	Interact with Simile Models
2015-02-18	clusterGeneration	Random Cluster Generation (with Specified Degree of Separation)
2015-02-18	lbfgsb3	Limited Memory BFGS Minimizer with Bounds on Parameters
2015-02-18	MortalitySmooth	Smoothing and Forecasting Poisson Counts with P-Splines
2015-02-18	rjade	A Clean, Whitespace-Sensitive Template Language for Writing HTML
2015-02-17	analyz	Model Layer for Automatic Data Analysis via CSV File Interpretation
2015-02-17	ATE	Inference for Average Treatment Effects using Covariate Balancing
2015-02-17	GaDiFPT	First Passage Time Simulation for Gaussian Diffusion Processes
2015-02-17	hpcwld	High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion
2015-02-17	IBDhaploRtools	Functions for the Analysis of IBD Haplo Output
2015-02-17	IBDLabels	Convert Between Different IBD-State Labelling Schemes
2015-02-17	palaeoSig	Significance Tests for Palaeoenvironmental Reconstructions
2015-02-16	bde	Bounded Density Estimation
2015-02-16	glba	General Linear Ballistic Accumulator Models
2015-02-16	LPS	Linear Predictor Score, for Binary Inference from Multiple Continuous Variables
2015-02-16	PCIT	Partial Correlation Coefficient with Information Theory
2015-02-16	randomUniformForest	Random Uniform Forests for Classification, Regression and Unsupervised Learning
2015-02-16	wbs	Wild Binary Segmentation for Multiple Change-Point Detection
2015-02-15	nFCA	Numerical Formal Concept Analysis for Systematic Clustering
2015-02-15	sparseBC	Sparse Biclustering of Transposable Data
2015-02-14	minimist	Parse Argument Options
2015-02-14	phytotools	Phytoplankton Production Tools
2015-02-13	demi	Differential Expression from Multiple Indicators
2015-02-13	plotGoogleMaps	Plot Spatial or Spatio-Temporal Data Over Google Maps
2015-02-13	ROAuth	R Interface For OAuth
2015-02-13	shinyTree	jsTree Bindings for Shiny
2015-02-13	tbart	Teitz and Bart's p-Median Algorithm
2015-02-12	FastKNN	Fast k-Nearest Neighbors
2015-02-12	gaselect	Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data
2015-02-12	kselection	Selection of K in K-Means Clustering
2015-02-12	MTS	All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models
2015-02-11	ARPobservation	Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
2015-02-11	condMVNorm	Conditional Multivariate Normal Distribution
2015-02-11	rNMF	Robust Nonnegative Matrix Factorization
2015-02-11	shinybootstrap2	Bootstrap 2 Web Components for Use with Shiny
2015-02-11	tmg	Truncated Multivariate Gaussian Sampling
2015-02-11	treelet	An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
2015-02-10	cccp	Cone Constrained Convex Problems
2015-02-10	ICAFF	Imperialist Competitive Algorithm
2015-02-10	SoftClustering	Soft Clustering Algorithms
2015-02-09	ivpanel	Instrumental Panel Data Models
2015-02-08	cec2005benchmark	Benchmark for the CEC 2005 Special Session on Real-Parameter Optimization
2015-02-08	MetNorm	Statistical Methods for Normalizing Metabolomics Data
2015-02-08	SVMMatch	Causal Effect Estimation and Diagnostics with Support Vector Machines
2015-02-07	klausuR	Multiple Choice Test Evaluation
2015-02-06	knncat	Nearest-neighbor Classification with Categorical Variables
2015-02-06	SimilarityMeasures	Trajectory Similarity Measures
2015-02-05	BayesMed	Default Bayesian Hypothesis Tests for Correlation, Partial Correlation, and Mediation
2015-02-05	fdatest	Interval Testing Procedure for Functional Data
2015-02-05	svKomodo	SciViews GUI API - Functions to interface with Komodo Edit/IDE
2015-02-04	BLCOP	Black-Litterman and Copula Opinion Pooling Frameworks
2015-02-03	poisDoubleSamp	Confidence Intervals with Poisson Double Sampling
2015-02-03	RPPairwiseDesign	Resolvable partially pairwise balanced design and Space-filling design via association scheme
2015-02-02	lmeNB	Compute the Personalized Activity Index Based on a Negative Binomial Model
2015-02-02	multicon	Multivariate Constructs
2015-02-02	royston	Royston's H Test: Multivariate Normality Test
2015-02-02	SETPath	Spiked Eigenvalue Test for Pathway data
2015-02-01	hbm	Hierarchical Block Matrix Analysis
2015-01-31	d3Network	Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
2015-01-31	infra	An Infrastructure Proxy Function
2015-01-31	LMERConvenienceFunctions	Model Selection and Post-hoc Analysis for (G)LMER Models
2015-01-31	multiAssetOptions	Finite Difference Method for Multi-Asset Option Valuation
2015-01-30	kissmig	a Keep It Simple Species Migration Model
2015-01-30	ppmlasso	Point Process Models with LASSO Penalties
2015-01-29	mousetrack	Mouse-Tracking Measures from Trajectory Data
2015-01-29	portfolio	Analysing equity portfolios
2015-01-29	roughrf	Roughened Random Forests for Binary Classification
2015-01-28	compareC	Compare Two Correlated C Indices with Right-censored Survival Outcome
2015-01-28	flower	Tools for characterizing flowering traits
2015-01-28	KFKSDS	Kalman Filter, Smoother and Disturbance Smoother
2015-01-28	metaMA	Meta-analysis for MicroArrays
2015-01-28	SLHD	Maximin-Distance (Sliced) Latin Hypercube Designs
2015-01-28	SMNCensReg	Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions
2015-01-27	geoCount	Analysis and Modeling for Geostatistical Count Data
2015-01-27	MaxPro	Maximum Projection Designs
2015-01-27	mvnpermute	Generate New Multivariate Normal Samples from Permutations
2015-01-27	tufterhandout	Tufte-style html document format for rmarkdown
2015-01-26	metaRNASeq	Meta-analysis of RNA-seq data
2015-01-26	sae2	Small Area Estimation: Time-series Models
2015-01-24	CensRegMod	Fits Normal and Student-t Censored Regression Model
2015-01-23	pbivnorm	Vectorized Bivariate Normal CDF
2015-01-23	remMap	Regularized Multivariate Regression for Identifying Master Predictors
2015-01-22	cec2013	Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013
2015-01-22	ESEA	ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis
2015-01-22	sig	Print Function Signatures
2015-01-21	ArfimaMLM	Arfima-MLM Estimation For Repeated Cross-Sectional Data
2015-01-21	D2C	Predicting Causal Direction from Dependency Features
2015-01-21	drmdel	Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples
2015-01-21	ggm	Functions for graphical Markov models
2015-01-21	MenuCollection	Collection of Configurable GTK+ Menus
2015-01-20	snpRF	Random Forest for SNPs to Prevent X-chromosome SNP Importance Bias
2015-01-19	imputeLCMD	A collection of methods for left-censored missing data imputation
2015-01-17	HTMLUtils	Facilitates Automated HTML Report Creation
2015-01-16	anfis	Adaptive Neuro Fuzzy Inference System in R
2015-01-16	fwsim	Fisher-Wright Population Simulation
2015-01-16	OrdinalLogisticBiplot	Biplot representations of ordinal variables
2015-01-15	MultiMeta	Meta-analysis of Multivariate Genome Wide Association Studies
2015-01-14	ASPBay	Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data
2015-01-14	mailR	A Utility to Send Emails from R
2015-01-14	mztwinreg	Regression Models for Monozygotic Twin Data
2015-01-14	prabclus	Functions for Clustering of Presence-Absence, Abundance and Multilocus Genetic Data
2015-01-14	robustDA	Robust Mixture Discriminant Analysis
2015-01-14	SPODT	Spatial Oblique Decision Tree
2015-01-13	chromer	Interface to Chromosome Counts Database API
2015-01-13	HierO	A graphical user interface for calculating power and sample size for hierarchical data
2015-01-13	MBmca	Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
2015-01-13	readMLData	Reading Machine Learning Benchmark Data Sets in Different Formats
2015-01-13	Sunder	Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2015-01-13	traj	Trajectory Analysis
2015-01-12	classyfire	Robust multivariate classification using highly optimised SVM ensembles
2015-01-12	CNOGpro	Copy Numbers of Genes in prokaryotes
2015-01-12	DEEPR	Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test
2015-01-12	HomoPolymer	Theoretical Model to Simulate Radical Polymerization
2015-01-12	penMSM	Estimating Regularized Multi-state Models Using L1 Penalties
2015-01-11	leiv	Bivariate Linear Errors-In-Variables Estimation
2015-01-10	aoristic	aoristic analysis with spatial output (kml)
2015-01-10	neuRosim	Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data
2015-01-10	waveslim	Basic wavelet routines for one-, two- and three-dimensional signal processing
2015-01-09	randomizationInference	Flexible Randomization-Based Inference
2015-01-09	textometry	Textual Data Analysis Package used by the TXM Software
2015-01-08	interferenceCI	Exact Confidence Intervals in the Presence of Interference
2015-01-08	noia	Implementation of the Natural and Orthogonal InterAction (NOIA) model
2015-01-08	sra	Selection Response Analysis
2015-01-07	BEQI2	Benthic Ecosystem Quality Index 2
2015-01-07	cudaBayesreg	CUDA Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis
2015-01-07	gdimap	Generalized Diffusion Magnetic Resonance Imaging
2015-01-07	glpkAPI	R Interface to C API of GLPK
2015-01-07	tsc	Likelihood-ratio Tests for Two-Sample Comparisons
2015-01-05	CorrBin	Nonparametrics with Clustered Binary and Multinomial Data
2015-01-05	DistributionUtils	Distribution Utilities
2015-01-05	moments	Moments, cumulants, skewness, kurtosis and related tests
2015-01-05	NormalLaplace	The Normal Laplace Distribution
2015-01-05	RadTran	Radon and Soil Gas Transport in 2D Porous Medium
2015-01-05	SCEPtER	Stellar CharactEristics Pisa Estimation gRid
2015-01-05	SkewHyperbolic	The Skew Hyperbolic Student t-Distribution
2015-01-05	VarianceGamma	The Variance Gamma Distribution
2015-01-04	EntropyEstimation	Estimation of Entropy and Related Quantities
2015-01-04	intReg	Interval Regression
2015-01-04	jiebaRD	Chinese Text Segmentation Data for jiebaR Package
2015-01-02	dropR	Analyze Drop Out of an Experiment or Survey
2015-01-02	ForImp	Imputation of Missing Values Through a Forward Imputation Algorithm
2015-01-02	TreePar	Estimating birth and death rates based on phylogenies
2015-01-01	glrt	Generalized Logrank Tests for Interval-censored Failure Time Data
2015-01-01	Storm	Write Storm Bolts in R using the Storm Multi-Language Protocol
2014-12-31	CNprep	Pre-process DNA Copy Number (CN) Data for Detection of CN Events
2014-12-31	YaleToolkit	Data exploration tools from Yale University
2014-12-30	BCDating	Business Cycle Dating and Plotting Tools
2014-12-30	CORE	Cores of Recurrent Events
2014-12-30	ParDNAcopy	Parallel implementation of the "segment" function of package "DNAcopy"
2014-12-29	diffEq	Functions from the book Solving Differential Equations in R
2014-12-29	dupiR	Bayesian inference from count data using discrete uniform priors
2014-12-29	ecolMod	"A practical guide to ecological modelling - using R as a simulation platform"
2014-12-29	metabolomics	Analysis of Metabolomics Data
2014-12-29	raters	A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables
2014-12-29	TBEST	Tree Branches Evaluated Statistically for Tightness
2014-12-28	BNDataGenerator	Data Generator based on Bayesian Network Model
2014-12-28	lm.beta	Add Standardized Regression Coefficients to lm-Objects
2014-12-27	extraTrees	Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression
2014-12-26	LIM	Linear Inverse Model examples and solution methods
2014-12-26	NetIndices	Estimating network indices, including trophic structure of foodwebs in R
2014-12-26	RConics	Computations on Conics
2014-12-24	additivityTests	Additivity Tests in the Two Way Anova with Single Sub-class Numbers
2014-12-24	BayClone2	Bayesian Feature Allocation Model for Tumor Heterogeneity
2014-12-24	historydata	Data Sets for Historians
2014-12-24	manipulate	Interactive Plots for RStudio
2014-12-24	OutlierDM	Outlier Detection for Multi-replicated High-throughput Data
2014-12-24	OutrankingTools	Functions for Solving Multiple-criteria Decision-making Problems
2014-12-23	KrigInv	Kriging-based Inversion for Deterministic and Noisy Computer Experiments
2014-12-22	MAd	Meta-Analysis with Mean Differences
2014-12-22	MPDiR	Data sets and scripts for Modeling Psychophysical Data in R
2014-12-21	PredictABEL	Assessment of Risk Prediction Models
2014-12-21	qmrparser	Parser combinator in R
2014-12-21	reports	Assist the Workflow of Writing Academic Articles and Other Reports
2014-12-20	NORTARA	Generation of Multivariate Data with Arbitrary Marginals
2014-12-20	orgR	Analyse Text Files Created by Emacs' Org mode
2014-12-20	SCEPtERbinary	Stellar CharactEristics Pisa Estimation gRid for Binary Systems
2014-12-20	tcltk2	Tcl/Tk Additions
2014-12-19	geonames	Interface to www.geonames.org web service
2014-12-19	sBF	Smooth Backfitting
2014-12-18	DCGL	Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data
2014-12-18	multiband	Period Estimation for Multiple Bands
2014-12-18	RoughSetKnowledgeReduction	Simplification of Decision Tables using Rough Sets
2014-12-18	selfingTree	Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing
2014-12-18	sprinter	Framework for Screening Prognostic Interactions
2014-12-17	hexView	Viewing Binary Files
2014-12-17	nullabor	Tools for Graphical Inference
2014-12-17	RcppDL	Deep Learning Methods via Rcpp
2014-12-17	rSFA	Slow Feature Analysis in R
2014-12-17	soil.spec	Soil Spectroscopy Tools and Reference Models
2014-12-16	leaderCluster	Leader Clustering Algorithm
2014-12-15	wildlifeDI	Calculate Indices of Dynamic Interaction for Wildlife Telemetry Data
2014-12-13	Rmosek	The R-to-MOSEK Optimization Interface
2014-12-13	Vdgraph	Variance dispersion graphs and Fraction of design space plots for response surface designs
2014-12-12	DSpat	Spatial Modelling for Distance Sampling Data
2014-12-11	c060	Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
2014-12-10	bnormnlr	Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models
2014-12-10	DnE	Distribution and Equation
2014-12-10	gsalib	Utility Functions For GATK
2014-12-09	cvAUC	Cross-Validated Area Under the ROC Curve Confidence Intervals
2014-12-09	isopam	Isopam (Clustering)
2014-12-09	MRSP	Multinomial Response Models with Structured Penalties
2014-12-09	normalp	Routines for Exponential Power Distribution
2014-12-09	RDataCanvas	Basic Runtime Support for Datacanvas.io
2014-12-08	bdynsys	Bayesian Dynamical System Model
2014-12-08	breakage	SICM pipette tip geometry estimation
2014-12-08	ccda	Combined Cluster and Discriminant Analysis
2014-12-08	extrafont	Tools for using fonts
2014-12-08	MetSizeR	GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
2014-12-08	rbounds	Perform Rosenbaum bounds sensitivity tests for matched and unmatched data
2014-12-07	BayesianAnimalTracker	Bayesian Melding of GPS and DR Path for Animal Tracking
2014-12-07	dashboard	Interactive Data Visualization with D3.js
2014-12-07	RColorBrewer	ColorBrewer Palettes
2014-12-06	algstat	Algebraic statistics in R
2014-12-06	Rcgmin	Conjugate Gradient Minimization of Nonlinear Functions
2014-12-05	okmesonet	Retrieve Oklahoma Mesonet climatological data
2014-12-04	BEDASSLE	Quantifies effects of geo/eco distance on genetic differentiation
2014-12-04	extWeibQuant	Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture
2014-12-04	HSSVD	Biclustering with Heterogeneous Variance
2014-12-04	NPS	Convenience Functions and Tests for Working With the Net Promoter Score (NPS)
2014-12-04	sensitivityPStrat	Principal Stratification Sensitivity Analysis Functions
2014-12-03	genMOSS	Functions for the Bayesian Analysis of GWAS Data
2014-12-03	rngSetSeed	Seeding the Default RNG with a Numeric Vector
2014-12-03	sequences	Generic and Biological Sequences
2014-12-02	gamboostMSM	Estimating multistate models using gamboost()
2014-12-02	MOrder	Check Time Homogeneity and Markov Chain Order
2014-12-02	plgp	Particle Learning of Gaussian Processes
2014-12-02	radar	Fundamental Formulas for Radar
2014-12-02	turfR	TURF Analysis for R
2014-12-02	VAR.etp	VAR modelling: estimation, testing, and prediction
2014-12-01	kriging	Ordinary Kriging
2014-12-01	MindOnStats	Data sets included in Utts and Heckard's Mind on Statistics
2014-12-01	ssd	Sample Size Determination (SSD) for Unordered Categorical Data
2014-11-30	rngwell19937	Random number generator WELL19937a with 53 or 32 bit output
2014-11-29	mco	Multiple Criteria Optimization Algorithms and Related Functions
2014-11-29	rainfreq	Rainfall Frequency (Design Storm) Estimates from the US National Weather Service
2014-11-29	simrel	Linear Model Data Simulation and Design of Computer Experiments
2014-11-27	DECIDE	DEComposition of Indirect and Direct Effects
2014-11-27	miRtest	combined miRNA- and mRNA-testing
2014-11-27	orderedLasso	Ordered Lasso and Time-lag Sparse Regression
2014-11-27	superbiclust	Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering)
2014-11-26	EstSimPDMP	Estimation and Simulation for PDMPs
2014-11-26	hierarchicalDS	Functions For Performing Hierarchical Analysis of Distance Sampling Data
2014-11-26	kpodclustr	Method for Clustering Partially Observed Data
2014-11-26	moduleColor	Basic Module Functions
2014-11-26	SunterSampling	Sunter's sampling design
2014-11-25	acss	Algorithmic Complexity for Short Strings
2014-11-25	GPArotation	GPA Factor Rotation
2014-11-25	gsarima	Two functions for Generalized SARIMA time series simulation
2014-11-25	Julia	Fractal Image Data Generator
2014-11-25	maboost	Binary and Multiclass Boosting Algorithms
2014-11-25	musicNMR	Conversion of Nuclear Magnetic Resonance spectrum in audio file
2014-11-25	setRNG	Set (Normal) Random Number Generator and Seed
2014-11-25	SMR	Externally Studentized Midrange Distribution
2014-11-25	soma	General-Purpose Optimisation With the Self-Organising Migrating Algorithm
2014-11-24	choplump	Choplump tests
2014-11-24	rdatamarket	Data access API for DataMarket.com
2014-11-24	sgr	Sample Generation by Replacement
2014-11-24	someKfwer	Controlling the Generalized Familywise Error Rate
2014-11-23	EloRating	Animal Dominance Hierarchies by Elo Rating
2014-11-22	magrittr	A Forward-Pipe Operator for R
2014-11-22	proteomics	Statistical Analysis of High Throughput Proteomics Data
2014-11-22	sisus	SISUS: Stable Isotope Sourcing using Sampling
2014-11-20	BACprior	Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm
2014-11-20	crmn	CCMN and other noRMalizatioN methods for metabolomics data
2014-11-20	gset	Group Sequential Design in Equivalence Studies
2014-11-20	ilc	Lee-Carter Mortality Models using Iterative Fitting Algorithms
2014-11-20	RAPIDR	Reliable Accurate Prenatal non-Invasive Diagnosis R package
2014-11-20	x12GUI	X12 - Graphical User Interface
2014-11-19	QuACN	QuACN: Quantitative Analysis of Complex Networks
2014-11-19	SEAsic	Score Equity Assessment- summary index computation
2014-11-19	sqlutils	Utilities for working with SQL files
2014-11-18	attribrisk	Population Attributable Risk
2014-11-18	spatialTailDep	Estimation of spatial tail dependence models
2014-11-17	randtests	Testing randomness in R
2014-11-17	spThin	Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models
2014-11-14	entropy	Estimation of Entropy, Mutual Information and Related Quantities
2014-11-14	ttScreening	Genome-wide DNA methylation sites screening by use of training and testing samples
2014-11-13	optimx	A Replacement and Extension of the optim() Function
2014-11-13	toxtestD	Experimental design for binary toxicity tests
2014-11-11	catdata	Categorical Data
2014-11-11	lymphclon	Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates
2014-11-10	episplineDensity	Density Estimation with Soft Information by Exponential Epi-splines
2014-11-10	ionflows	Calculate the Number of Required Flows for Semiconductor Sequencing
2014-11-10	ips	Interfaces to Phylogenetic Software in R
2014-11-10	ISBF	Iterative Selection of Blocks of Features - ISBF
2014-11-10	ModelGood	Validation of risk prediction models
2014-11-10	Rcpp11	R and C++11
2014-11-10	Rothermel	Rothermel fire spread model for R
2014-11-09	riskSimul	Risk Quantification for Stock Portfolios under the T-Copula Model
2014-11-08	LinCal	Static Univariate Frequentist and Bayesian Linear Calibration
2014-11-08	OptionPricing	Option Pricing with Efficient Simulation Algorithms
2014-11-07	BB	Solving and Optimizing Large-Scale Nonlinear Systems
2014-11-07	BTYD	Implementing Buy 'Til You Die Models
2014-11-07	npsm	Package for Nonparametric Statistical Methods using R
2014-11-06	PLSbiplot1	The Partial Least Squares (PLS) Biplot
2014-11-05	hcp	Change Point Estimation for Regression with Heteroscedastic Data
2014-11-05	MAT	Multidimensional Adaptive Testing
2014-11-05	MGL	Module Graphical Lasso
2014-11-05	strap	Stratigraphic Tree Analysis for Palaeontology
2014-11-03	CombinePValue	Combine a Vector of Correlated p-values
2014-11-03	ScoreGGUM	Score Persons Using the Generalized Graded Unfolding Model
2014-11-03	sdcTarget	Statistical Disclosure Control Substitution Matrix Calculator
2014-11-02	bcpa	Behavioral change point analysis of animal movement
2014-11-02	OptimalCutpoints	Computing optimal cutpoints in diagnostic tests
2014-11-01	kaps	K-Adaptive Partitioning for Survival data
2014-11-01	RMTstat	Distributions, Statistics and Tests derived from Random Matrix Theory
2014-11-01	smac	Sparse Multi-category Angle-Based Large-Margin Classifiers
2014-10-31	tuple	Find every match, or orphan, duplicate, triplicate, or other replicated values
2014-10-29	isdals	Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences
2014-10-29	ldr	Methods for likelihood-based dimension reduction in regression
2014-10-28	CateSelection	Categorical Variable Selection Methods
2014-10-28	lassoscore	High-Dimensional Inference with the Penalized Score Test
2014-10-27	qdm	Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments
2014-10-27	ropensecretsapi	R Package for the OpenSecrets.org API
2014-10-25	DBKGrad	Discrete Beta Kernel Graduation of Mortality Data
2014-10-25	highD2pop	Two-Sample Tests for Equality of Means in High Dimension
2014-10-25	ivpack	Instrumental Variable Estimation
2014-10-22	FDGcopulas	Multivariate Dependence with FDG Copulas
2014-10-22	JMdesign	Joint Modeling of Longitudinal and Survival Data - Power Calculation
2014-10-21	cdcsis	Conditional Distance Correlation and Its Related Feature Screening Method
2014-10-20	icapca	Mixed ICA/PCA
2014-10-20	MDSGUI	A GUI for interactive MDS in R
2014-10-20	Rook	Rook - a web server interface for R
2014-10-19	multispatialCCM	Multispatial Convergent Cross Mapping
2014-10-18	landpred	Landmark Prediction of a Survival Outcome
2014-10-18	rareNMtests	Ecological and biogeographical null model tests for comparing rarefaction curves
2014-10-18	stochprofML	Stochastic Profiling using Maximum Likelihood Estimation
2014-10-17	gsg	Calculation of selection coefficients
2014-10-17	pBrackets	Plot Brackets
2014-10-17	RMKdiscrete	Sundry Discrete Probability Distributions
2014-10-16	Metatron	Meta-analysis for Classification Data and Correction to Imperfect Reference
2014-10-16	NPCirc	Nonparametric Circular Methods
2014-10-16	RcmdrPlugin.steepness	Steepness Rcmdr Plug-in
2014-10-16	StMoSim	Plots a QQ-Norm Plot with several Gaussian simulations
2014-10-16	windex	windex: Analysing convergent evolution using the Wheatsheaf index
2014-10-15	AlgDesign	Algorithmic Experimental Design
2014-10-15	nsgp	Non-Stationary Gaussian Process Regression
2014-10-15	vetools	Tools for Venezuelan Environmental Data
2014-10-14	dice	Calculate probabilities of various dice-rolling events
2014-10-13	datamart	Unified access to your data sources
2014-10-13	popRange	popRange: A spatially and temporally explicit forward genetic simulator
2014-10-13	QualInt	Test for Qualitative Interactions
2014-10-09	minqa	Derivative-free optimization algorithms by quadratic approximation
2014-10-09	mpcv	Multivariate Process Capability Vector
2014-10-08	Rdsm	Threads Environment for R
2014-10-07	CINID	Curculionidae INstar IDentification
2014-10-07	mnormpow	Multivariate Normal Distributions with Power Integrand
2014-10-07	VecStatGraphs3D	Vector analysis using graphical and analytical methods in 3D
2014-10-06	GISTools	Some further GIS capabilities for R
2014-10-06	lllcrc	Local Log-linear Models for Capture-Recapture
2014-10-06	mvprpb	Orthant Probability of the Multivariate Normal Distribution
2014-10-06	NB	Maximum Likelihood method in estimating effective population size from genetic data
2014-10-06	snipEM	Snipping methods for robust estimation and clustering
2014-10-05	catIrt	An R Package for Simulating IRT-Based Computerized Adaptive Tests
2014-10-04	SightabilityModel	Wildlife Sightability Modeling
2014-10-04	vec2dtransf	2D Cartesian Coordinate Transformation
2014-10-02	DDIwR	DDI with R
2014-10-02	TED	Turbulence Time Series Event Detection and Classification
2014-10-01	exsic	Convenience Functions for Botanists to Create Specimens Indices
2014-10-01	SQDA	Sparse Quadratic Discriminant Analysis
2014-10-01	steepness	Testing Steepness of Dominance Hierarchies
2014-09-29	atmcmc	Automatically Tuned Markov Chain Monte Carlo
2014-09-29	GPFDA	Apply Gaussian Process in Functional data analysis
2014-09-29	httpRequest	Basic HTTP Request
2014-09-29	log4r	A simple logging system for R, based on log4j
2014-09-29	rFDSN	Get Seismic Data from the International Federation of Digital Seismograph Networks
2014-09-28	neural	Neural Networks
2014-09-26	GenWin	Spline Based Window Boundaries for Genomic Analyses
2014-09-26	Guerry	Maps, data and methods related to Guerry (1833) "Moral Statistics of France"
2014-09-26	jSonarR	jSonar Analytics Platform API for R
2014-09-25	SPREDA	Statistical Package for Reliability Data Analysis
2014-09-23	pvsR	An R package to interact with the Project Vote Smart API for scientific research
2014-09-22	documair	Automatic Documentation for R packages
2014-09-22	IBrokers	R API to Interactive Brokers Trader Workstation
2014-09-21	RcmdrPlugin.MA	Graphical User Interface for Conducting Meta-Analyses in R
2014-09-21	sendmailR	send email using R
2014-09-21	trotter	Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector
2014-09-20	Density.T.HoldOut	Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
2014-09-20	mitools	Tools for multiple imputation of missing data
2014-09-19	allelematch	Identifying unique multilocus genotypes where genotyping error and missing data may be present
2014-09-19	beanplot	Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot)
2014-09-19	edgeRun	More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data
2014-09-19	iki.dataclim	Consistency, Homogeneity and Summary Statistics of Climatological Data
2014-09-19	opentraj	Tools for Creating and Analysing Air Trajectory Data
2014-09-19	RidgeFusion	R Package for Ridge Fusion in Statistical Learning
2014-09-19	RMOA	Connect R with MOA for Massive Online Analysis
2014-09-19	spatialnbda	Performs spatial NBDA in a Bayesian context
2014-09-18	bbo	Biogeography-Based Optimization
2014-09-18	ivbma	Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors
2014-09-18	modTempEff	Modelling temperature effects using time series data
2014-09-17	qgtools	Tools for Quantitative Genetics Data Analyses
2014-09-17	RadioSonde	Tools for plotting skew-T diagrams and wind profiles
2014-09-17	RMOAjars	External jars required for package RMOA
2014-09-16	compute.es	Compute Effect Sizes
2014-09-16	polidata	Political Data Interface in R
2014-09-15	propOverlap	Feature (gene) selection based on the Proportional Overlapping Scores
2014-09-14	agop	Aggregation Operators and Preordered Sets
2014-09-14	RcmdrPlugin.coin	Rcmdr Coin Plug-In
2014-09-13	phyloland	Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework
2014-09-13	referenceIntervals	Reference Intervals
2014-09-12	Mobilize	Mobilize plots and functions
2014-09-12	PepPrep	Insilico peptide mutation, digestion and homologous comparison
2014-09-11	knnIndep	Independence tests and benchmarks
2014-09-11	lefse	Phylogenetic and Functional Analyses for Ecology
2014-09-11	RankResponse	Ranking Responses in a Single Response Question or a Multiple Response Question
2014-09-11	rChoiceDialogs	rChoiceDialogs collection
2014-09-11	rsubgroup	Subgroup Discovery and Analytics
2014-09-10	eegkitdata	Data for package eegkit
2014-09-10	ForwardSearch	Forward Search using asymptotic theory
2014-09-10	hwriter	HTML Writer - Outputs R objects in HTML format
2014-09-10	Ohmage	R Client for Ohmage 2 server
2014-09-10	RcmdrPlugin.IPSUR	An IPSUR Plugin for the R Commander
2014-09-10	saery	Small Area Estimation for Rao and Yu Model
2014-09-09	bpkde	Back-Projected Kernel Density Estimation
2014-09-09	globalOptTests	Objective functions for benchmarking the performance of global optimization algorithms
2014-09-08	astro	Astronomy Functions, Tools and Routines
2014-09-08	lunar	Lunar Phase & Distance, Seasons and Other Environmental Factors
2014-09-08	minque	An R Package for Linear Mixed Model Analyses
2014-09-07	bionetdata	Biological and chemical data networks
2014-09-07	PerfMeas	PerfMeas: Performance Measures for ranking and classification tasks
2014-09-06	pyramid	Functions to draw population pyramid
2014-09-05	GxM	Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models
2014-09-04	BCA	Business and Customer Analytics
2014-09-04	cooptrees	Cooperative aspects of optimal trees in weighted graphs
2014-09-04	CopulaRegression	Bivariate Copula Based Regression Models
2014-09-04	helloJavaWorld	Hello Java World
2014-09-04	idr	Irreproducible discovery rate
2014-09-04	insuranceData	A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance
2014-09-04	MRCV	Methods for Analyzing Multiple Response Categorical Variables (MRCVs)
2014-09-04	parcor	Regularized estimation of partial correlation matrices
2014-09-04	pqantimalarials	web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa
2014-09-04	SDaA	Sampling: Design and Analysis
2014-09-04	sparseSEM	Sparse-aware Maximum Likelihood for Structural Equation Models
2014-09-03	coreTDT	TDT for compound heterozygous and recessive models
2014-09-03	logitchoice	Fitting l2-regularized logit choice models via generalized gradient descent
2014-09-02	ds	Descriptive Statistics
2014-09-02	exactmeta	Exact fixed effect meta analysis
2014-09-02	optrees	Optimal Trees in Weighted Graphs
2014-09-01	Rbitcoin	R & bitcoin integration
2014-09-01	traitr	An interface for creating GUIs modeled in part after traits UI module for python
2014-08-31	lbfgs	Limited-memory BFGS Optimization
2014-08-29	BIOM.utils	Utilities for the BIOM (Biological Observation Matrix) Format
2014-08-29	Eplot	Plotting longitudinal series
2014-08-29	raincpc	Obtain and Analyze Rainfall Data from the Climate Prediction Center
2014-08-29	Rcapture	Loglinear Models for Capture-Recapture Experiments
2014-08-28	bfast	Breaks For Additive Season and Trend (BFAST)
2014-08-28	BioStatR	Initiation Ã la Statistique avec R
2014-08-28	cgAUC	Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
2014-08-28	gWidgets	gWidgets API for building toolkit-independent, interactive GUIs
2014-08-28	RcmdrPlugin.DoE	R Commander Plugin for (industrial) Design of Experiments
2014-08-27	blkergm	Fitting block ERGM given the block structure on social networks
2014-08-27	MultiSV	MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing
2014-08-27	pamr	Pam: prediction analysis for microarrays
2014-08-27	ptinpoly	Point-In-Polyhedron Test (2D and 3D)
2014-08-27	shopifyr	An R Interface to the Shopify API
2014-08-26	BTSPAS	Bayesian Time-Strat. Population Analysis
2014-08-26	cents	Censored time series
2014-08-26	KANT	Package to identify and sort genes overexpressed
2014-08-25	commandr	Command pattern in R
2014-08-25	granova	Graphical Analysis of Variance
2014-08-24	mkde	2D and 3D movement-based kernel density estimates (MKDEs)
2014-08-24	sonicLength	Estimating Abundance of Clones from DNA fragmentation data
2014-08-23	AMOEBA	A Multidirectional Optimum Ecotope-Based Algorithm
2014-08-23	labeling	Axis Labeling
2014-08-23	mppa	Statistics for analysing multiple simultaneous point processes on the real line
2014-08-23	pauwels2014	Bayesian Experimental Design for Systems Biology
2014-08-23	survAccuracyMeasures	Estimate accuracy measures for risk prediction markers from survival data
2014-08-22	scaRabee	Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
2014-08-22	wpp2012	World Population Prospects 2012
2014-08-22	xlsxjars	Package required POI jars for the xlsx package
2014-08-21	SocialNetworks	Generates social networks based on distance
2014-08-21	TableToLongForm	TableToLongForm
2014-08-20	matpow	matrix powers
2014-08-19	extlasso	Maximum penalized likelihood estimation with extended lasso penalty
2014-08-19	FD	Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology
2014-08-19	laeken	Estimation of indicators on social exclusion and poverty
2014-08-18	bigmemory.sri	A shared resource interface for Bigmemory Project packages
2014-08-18	mvrtn	Mean and Variance of Truncated Normal Distribution
2014-08-17	classify	Classification Accuracy and Consistency under IRT models
2014-08-16	snpar	Supplementary Non-parametric Statistics Methods
2014-08-15	CVTuningCov	Regularized Estimators of Covariance Matrices with CV Tuning
2014-08-15	gCat	Graph-based two-sample tests for categorical data
2014-08-15	phtt	Panel Data Analysis with Heterogeneous Time Trends
2014-08-15	pycno	Pycnophylactic Interpolation
2014-08-15	rtype	A strong type system for R
2014-08-14	AntWeb	programmatic interface to the AntWeb
2014-08-14	fastGHQuad	Fast Rcpp implementation of Gauss-Hermite quadrature
2014-08-14	RFLPtools	Tools to analyse RFLP data
2014-08-14	trimTrees	Trimmed opinion pools of trees in a random forest
2014-08-13	dicionariosIBGE	Dictionaries for reading microdata surveys from IBGE
2014-08-13	growthrate	Bayesian reconstruction of growth velocity
2014-08-13	LEAPFrOG	Likelihood Estimation of Admixture in Parents From Offspring Genotypes
2014-08-13	linkcomm	Tools for Generating, Visualizing, and Analysing Link Communities in Networks
2014-08-13	tvd	Total Variation Denoising
2014-08-12	astrodatR	Astronomical Data
2014-08-12	cramer	Multivariate nonparametric Cramer-Test for the two-sample-problem
2014-08-12	Xmisc	Xiaobei's miscellaneous classes and functions
2014-08-11	ibeemd	Irregular-lattice based ensemble empirical mode decomposition
2014-08-11	threeboost	Thresholded variable selection and prediction based on estimating equations
2014-08-10	hglasso	Learning graphical models with hubs
2014-08-10	RWebLogo	plotting custom sequence logos
2014-08-10	tiger	TIme series of Grouped ERrors
2014-08-10	UScancer	Create US cancer datasets from SEER, IARC, and US Census data
2014-08-10	vrtest	Variance Ratio tests and other tests for Martingale Difference Hypothesis
2014-08-09	astrolibR	Astronomy Users Library
2014-08-09	ecipex	Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models
2014-08-09	muhaz	Hazard Function Estimation in Survival Analysis
2014-08-09	SnowballC	Snowball stemmers based on the C libstemmer UTF-8 library
2014-08-08	itertools2	itertools2: Functions creating iterators for efficient looping
2014-08-06	osDesign	Design and analysis of observational studies
2014-08-06	rje	Miscellaneous useful functions
2014-08-05	EMMIXuskew	Fitting Unrestricted Multivariate Skew t Mixture Models
2014-08-05	SDMTools	Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises
2014-08-04	symmoments	Symbolic central and noncentral moments of the multivariate normal distribution
2014-08-03	interAdapt	interAdapt
2014-08-03	sanitizers	C/C++ source code to trigger Address and Undefined Behaviour Sanitizers
2014-08-02	MGRASTer	API Client for the MG-RAST Server of the US DOE KBase
2014-08-01	optiscale	Optimal scaling
2014-08-01	subgroup	Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials
2014-07-31	agsemisc	Miscellaneous plotting and utility functions
2014-07-31	GeoDE	A geometrical Approach to Differential expression and gene-set enrichment
2014-07-30	ExceedanceTools	Confidence regions for exceedance sets and contour lines
2014-07-30	rareGE	Testing Gene-Environment Interaction for Rare Genetic Variants
2014-07-29	NeatMap	Non-clustered heatmap alternatives
2014-07-28	cosinor	Tools for estimating and predicting the cosinor model
2014-07-28	cvxclustr	Splitting methods for convex clustering
2014-07-28	RJSONIO	Serialize R objects to JSON, JavaScript Object Notation
2014-07-26	dcmr	Attribute profile estimation using Diagnostic Classification Models and MCMC
2014-07-26	infotheo	Information-Theoretic Measures
2014-07-26	stsm.class	Class and Methods for Structural Time Series Models
2014-07-25	nicheROVER	(Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches
2014-07-24	mtk	Mexico ToolKit library (MTK)
2014-07-24	sensitivitymw	Sensitivity analysis using weighted M-statistics
2014-07-24	ssh.utils	Local and remote system commands with output and error capture
2014-07-23	hglm.data	Data for The hglm Package
2014-07-23	ReorderCluster	Reordering the dendrogram according to the class labels
2014-07-23	rnaseqWrapper	Wrapper for several R packages and scripts to automate RNA-seq analysis
2014-07-22	fueleconomy	EPA fuel economy data
2014-07-22	leapp	latent effect adjustment after primary projection
2014-07-22	mewAvg	A Fixed Memeory Moving Expanding Window Average
2014-07-22	nasaweather	Collection of datasets from the ASA 2006 data expo
2014-07-22	nontargetData	Quantized simulation data of isotope pattern centroids
2014-07-22	RMRAINGEN	RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values
2014-07-22	SPACECAP	A Program to Estimate Animal Abundance and Density using Bayesian Spatially-Explicit Capture-Recapture Models
2014-07-21	GeoGenetix	Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2014-07-21	ineq	Measuring Inequality, Concentration, and Poverty
2014-07-20	gWidgetstcltk	Toolkit implementation of gWidgets for tcltk package
2014-07-20	ProgGUIinR	support package for "Programming Graphical User Interfaces in R"
2014-07-20	SBRect	Detecting structural breaks using rectangle covering (non-parametric method)
2014-07-18	bezier	Bezier Curve and Spline Toolkit
2014-07-18	siRSM	Single-Index Response Surface Models
2014-07-17	mvcwt	Wavelet analysis of multiple time series
2014-07-16	functional	Curry, Compose, and other higher-order functions
2014-07-16	GCAI.bias	Guided Correction Approach for Inherited bias (GCAI.bias)
2014-07-16	hillmakeR	Perform occupancy analysis
2014-07-16	translate	Bindings for the Google Translate API v2
2014-07-15	ParallelForest	Random Forest Classification with Parallel Computing
2014-07-15	quad	Exact permutation moments of quadratic form statistics
2014-07-15	ROSE	ROSE: Random Over-Sampling Examples
2014-07-11	popKorn	For interval estimation of mean of selected populations
2014-07-11	refund.wave	Wavelet-Domain Regression with Functional Data
2014-07-10	CondReg	Condition Number Regularized Covariance Estimation
2014-07-10	COSINE	COndition SpecIfic sub-NEtwork
2014-07-10	metafolio	Metapopulation simulations for conserving salmon through portfolio optimization
2014-07-10	robustvarComp	Robust Estimation of Variance Component Models
2014-07-10	rysgran	Grain size analysis, textural classifications and distribution of unconsolidated sediments
2014-07-09	crossReg	Confidence intervals for crossover points of two simple regression lines
2014-07-09	translateR	Bindings for the Google and Microsoft Translation APIs
2014-07-08	EvoRAG	Evolutionary Rates Across Gradients
2014-07-08	RmixmodCombi	Combining Mixture Components for Clustering
2014-07-06	rkvo	Read Key/Value Pair Observations
2014-07-05	ForIT	Functions from the 2nd Italian Forest Inventory (INFC)
2014-07-05	Thinknum	Thinknum Data Connection
2014-07-03	Bayesianbetareg	Bayesian Beta regression: joint mean and precision modeling
2014-07-03	mcc	Moment Corrected Correlation
2014-07-03	qualCI	Causal Inference with Qualitative and Ordinal Information on Outcomes
2014-07-02	FunctionalNetworks	An algorithm for gene and gene set network inference
2014-07-02	hSDM	hierarchical Bayesian species distribution models
2014-07-02	MAVTgsa	Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest
2014-07-01	subsemble	An Ensemble Method for Combining Subset-Specific Algorithm Fits
2014-07-01	sudoku	Sudoku Puzzle Generator and Solver
2014-06-30	CORM	The Clustering of Regression Models Method
2014-06-30	GenBinomApps	Clopper-Pearson Confidence Interval and Generalized Binomial Distribution
2014-06-30	stressr	Fetch and plot financial stress index and component data
2014-06-26	ezsim	provide an easy to use framework to conduct simulation
2014-06-26	pedigreemm	Pedigree-based mixed-effects models
2014-06-26	RelValAnalysis	Relative Value Analysis
2014-06-26	sp23design	Design and Simulation of seamless Phase II-III Clinical Trials
2014-06-25	nlsMicrobio	Nonlinear regression in predictive microbiology
2014-06-24	FisHiCal	Iterative FISH-based Calibration of Hi-C Data
2014-06-24	matlab	MATLAB emulation package
2014-06-24	RWBP	Detects spatial outliers using a Random Walk on Bipartite Graph
2014-06-24	rwt	Rice Wavelet Toolbox wrapper
2014-06-23	rClinicalCodes	R tools for integrating with the www.clinicalcodes.org repository
2014-06-22	pbdNCDF4	Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files
2014-06-22	TaoTeProgramming	Illustrations from Tao Te Programming
2014-06-21	bcpmeta	Bayesian Multiple Changepoint Detection Using Metadata
2014-06-20	parallelMCMCcombine	Methods for combining independent subset Markov chain Monte Carlo (MCMC) posterior samples to estimate a posterior density given the full data set
2014-06-19	CommunityCorrelogram	Ecological Community Correlogram
2014-06-19	hazus	Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters
2014-06-18	localsolver	R API to LocalSolver
2014-06-17	cmprsk	Subdistribution Analysis of Competing Risks
2014-06-17	KernSmoothIRT	Nonparametric Item Response Theory
2014-06-17	tictoc	Functions for timing R scripts, as well as implementations of Stack and List structures
2014-06-16	arnie	"Arnie" box office records 1982-2014
2014-06-15	xhmmScripts	XHMM R scripts
2014-06-14	rbitcoinchartsapi	R Package for the BitCoinCharts.com API
2014-06-13	DeducerText	Deducer GUI for Text Data
2014-06-13	ElstonStewart	Elston-Stewart Algorithm
2014-06-13	ESGtoolkit	Toolkit for the simulation of financial assets and interest rates models
2014-06-13	PCDSpline	Semiparametric regression analysis of panel count data using monotone splines
2014-06-12	qVarSel	Variables Selection for Clustering and Classification
2014-06-12	ustyc	Fetch US Treasury yield curve data
2014-06-11	tm.plugin.alceste	Import texts from files in the Alceste format using the tm text mining framework
2014-06-10	gsmoothr	Smoothing tools
2014-06-10	HiCseg	Detection of domains in HiC data
2014-06-10	ICsurv	A package for semiparametric regression analysis of interval-censored data
2014-06-10	ORCI	Several confidence intervals for the odds ratio
2014-06-09	IsoCI	Confidence intervals for current status data based on transformations and bootstrap
2014-06-07	genasis	Global ENvironmental ASsessment Information System (GENASIS) computational tools
2014-06-07	Interact	Tests for marginal interactions in a 2 class response model
2014-06-06	memgene	Spatial pattern detection in genetic distance data using Moran's Eigenvector Maps
2014-06-05	AR1seg	Segmentation of an autoregressive Gaussian process of order 1
2014-06-05	vbsr	Variational Bayes Spike Regression Regularized Linear Models
2014-06-04	ChargeTransport	Charge Transfer Rates and Charge Carrier Mobilities
2014-06-04	rsdepth	Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis
2014-06-04	sas7bdat	SAS Database Reader (experimental)
2014-06-03	ebSNP	Genotyping and SNP calling using single-sample next generation sequencing data
2014-06-02	dissUtils	Utilities for making pairwise comparisons of multivariate data
2014-06-02	rHealthDataGov	Retrieve data sets from the HealthData.gov data API
2014-05-31	lasso2	L1 constrained estimation aka ‘lasso’
2014-05-31	pbo	Probability of Backtest Overfitting
2014-05-31	ripa	R Image Processing and Analysis
2014-05-30	interventionalDBN	Interventional Inference for Dynamic Bayesian Networks
2014-05-30	kdetrees	Nonparametric method for identifying discordant phylogenetic trees
2014-05-30	SensitivityCaseControl	Sensitivity Analysis for Case-Control Studies
2014-05-28	ivlewbel	Uses heteroscedasticity to estimate mismeasured and endogenous regressor models
2014-05-28	ordBTL	Modelling comparison data with ordinal response
2014-05-28	seg	A set of tools for measuring spatial segregation
2014-05-27	bmmix	Bayesian multinomial mixture
2014-05-27	metagen	Inference in Meta Analysis and Meta Regression
2014-05-26	SRRS	The Stepwise Response Refinement Screener (SRRS)
2014-05-23	rpart.utils	Tools for parsing and manipulating rpart objects, including generating machine readable rules
2014-05-23	tsbridge	Calculate normalising constants for Bayesian time series models
2014-05-23	ucbthesis	UC Berkeley graduate division thesis template
2014-05-22	BCE	Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
2014-05-21	spatial.gev.bma	Hierarchical spatial generalized extreme value (GEV) modeling with Bayesian Model Averaging (BMA)
2014-05-19	hawkes	Hawkes process simulation and calibration toolkit
2014-05-18	cladoRcpp	C++ implementations of phylogenetic cladogenesis calculations
2014-05-18	cstar	Substantive significance testing for regression estimates and marginal effects
2014-05-18	Hankel	Univariate non-parametric two-sample test based on empirical Hankel transforms
2014-05-18	MC2toPath	Translates information from netcdf files with MC2 output into inter-PVT transitions
2014-05-17	boostr	A modular framework to bag or boost any estimation procedure
2014-05-16	dynia	Fit Dynamic Intervention Model
2014-05-14	erpR	Event-related potentials (ERP) analysis, graphics and utility functions
2014-05-14	hydroApps	Tools and models for hydrological applications
2014-05-14	rvHPDT	Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees
2014-05-13	cutoffR	CUTOFF: A Spatio-temporal Imputation Method
2014-05-13	samplingEstimates	Sampling Estimates
2014-05-09	akmeans	Adaptive Kmeans algorithm based on threshold
2014-05-09	msap	Statistical analysis for Methylation-sensitive Amplification Polymorphism data
2014-05-08	PPtree	Projection pursuit classification tree
2014-05-08	rbundler	Rbundler manages an application's dependencies systematically and repeatedly
2014-05-07	freestats	Statistical algorithms used in common data mining course
2014-05-07	noncensus	U.S. Census Regional and Demographic Data
2014-05-06	bandit	Functions for simple A/B split test and multi-armed bandit analysis
2014-05-06	FLR	Fuzzy Logic Rule Classifier
2014-05-06	KappaV	Calculates "vectorial Kappa", an index of congruence between patchy mosaics
2014-05-05	truncSP	Semi-parametric estimators of truncated regression models
2014-05-03	sglr	An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test
2014-05-02	irtProb	Utilities and Probability Distributions Related to Multidimensional Person Item Response Models
2014-05-02	NominalLogisticBiplot	Biplot representations of categorical data
2014-05-01	MultiCNVDetect	Multiple Copy Number Variation Detection
2014-05-01	nplplot	Plotting linkage and association results
2014-04-30	CMPControl	Control Charts for Conway-Maxwell-Poisson Distribution
2014-04-30	lar	History of labour relations package
2014-04-30	pdfCluster	Cluster analysis via nonparametric density estimation
2014-04-30	SoilR	Models of Soil Organic Matter Decomposition
2014-04-29	bbefkr	Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density
2014-04-28	EasyMARK	Utility functions for working with mark-recapture data
2014-04-28	mcheatmaps	Multiple matrices heatmap visualization
2014-04-27	plusser	A Google+ Interface for R
2014-04-25	DynClust	Denoising and clustering for dynamical image sequence (2D or 3D)+T
2014-04-25	flux	Flux rate calculation from dynamic closed chamber measurements
2014-04-25	RSvgDevice	An R SVG graphics device
2014-04-24	clusterfly	Explore clustering interactively using R and GGobi
2014-04-24	EvCombR	Evidence Combination in R
2014-04-24	MILC	MIcrosimulation Lung Cancer (MILC) model
2014-04-23	classifly	Explore classification models in high dimensions
2014-04-23	meifly	Interactive model exploration using GGobi
2014-04-23	micEconCES	Analysis with the Constant Elasticity of Substitution (CES) function
2014-04-23	SNPassoc	SNPs-based whole genome association studies
2014-04-22	apmsWAPP	Pre- and Postprocessing for AP-MS data analysis based on spectral counts
2014-04-22	kcirt	k-Cube Thurstonian IRT Models
2014-04-22	micEconSNQP	Symmetric Normalized Quadratic Profit Function
2014-04-22	profr	An alternative display for profiling information
2014-04-21	GSAgm	Gene Set Analysis using the Gamma Method
2014-04-19	RApiSerialize	R API Serialization
2014-04-19	RTextureMetrics	Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices
2014-04-19	rWBclimate	A package for accessing World Bank climate data
2014-04-17	ATmet	Advanced Tools for Metrology
2014-04-17	poisson.glm.mix	Fit high dimensional mixtures of Poisson GLMs
2014-04-16	bigalgebra	BLAS routines for native R matrices and big.matrix objects
2014-04-15	Johnson	Johnson Transformation
2014-04-15	NBPSeq	Negative Binomial Models for RNA-Sequencing Data
2014-04-15	RGIFT	Create quizzes in GIFT Format
2014-04-15	scar	Shape-Constrained Additive Regression: a Maximum Likelihood Approach
2014-04-15	scio	Sparse Column-wise Inverse Operator
2014-04-14	AMORE	A MORE flexible neural network package
2014-04-14	LOGICOIL	LOGICOIL: multi-state prediction of coiled-coil oligomeric state
2014-04-13	RcppBDT	Rcpp bindings for the Boost Date_Time library
2014-04-12	BootPR	Bootstrap Prediction Intervals and Bias-Corrected Forecasting
2014-04-12	earlywarnings	Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries
2014-04-11	gRapfa	Acyclic Probabilistic Finite Automata
2014-04-11	rvTDT	population control weighted rare-variants TDT
2014-04-10	archetypes	Archetypal Analysis
2014-04-10	ora	Convenient Tools for Working with Oracle Databases
2014-04-09	cuttlefish.model	An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model
2014-04-09	GHQp	Gauss Hermite Quadrature with pruning
2014-04-09	PBSadmb	ADMB for R Using Scripts or GUI
2014-04-07	disclap	Discrete Laplace Exponential Family
2014-04-05	acss.data	Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
2014-04-05	bbemkr	Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error
2014-04-05	isotonic.pen	Penalized Isotonic Regression in one and two dimensions
2014-04-05	nonrandom	Stratification and matching by the propensity score
2014-04-04	EcoHydRology	A community modeling foundation for Eco-Hydrology
2014-04-03	doRedis	Foreach parallel adapter for the rredis package
2014-04-03	Methplot	Visualize the methylation patterns
2014-04-03	pcg	Preconditioned Conjugate Gradient Algorithm for solving Ax=b
2014-04-03	TrackReconstruction	Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data
2014-04-02	lpint	Local polynomial estimators of intensity function or its derivatives
2014-04-01	tosls	Instrumental Variables Two Stage Least Squares estimation
2014-03-31	evdbayes	Bayesian Analysis in Extreme Value Theory
2014-03-31	r2d2	Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution
2014-03-30	partsm	Periodic Autoregressive Time Series Models
2014-03-28	aCRM	Convenience functions for analytical Customer Relationship Management
2014-03-28	FacPad	Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
2014-03-28	invGauss	Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data
2014-03-28	MMMS	Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification
2014-03-28	polyaAeppli	Implementation of the Polya-Aeppli distribution
2014-03-27	iFad	An integrative factor analysis model for drug-pathway association inference
2014-03-26	Rphylip	An R interface for PHYLIP
2014-03-26	SubLasso	Gene selection using Lasso for Microarray data with user-defined genes fixed in model
2014-03-25	clValid	Validation of Clustering Results
2014-03-25	CMF	Collective matrix factorization
2014-03-25	Devore7	Data sets from Devore's "Prob and Stat for Eng (7th ed)"
2014-03-25	ivfixed	Instrumental fixed effect panel data model
2014-03-24	ccgarch	Conditional Correlation GARCH models
2014-03-24	CCpop	One and two locus GWAS of binary phenotype with case-control-population design
2014-03-24	lsdv	Least square dummy variable regression
2014-03-24	OutlierDC	Outlier Detection using quantile regression for Censored Data
2014-03-22	dna	Differential Network Analysis
2014-03-21	Stack	Stylized concatenation of data.frames or ffdfs
2014-03-20	deepnet	deep learning toolkit in R
2014-03-20	Paneldata	Linear models for panel data
2014-03-20	pspearman	Spearman's rank correlation test
2014-03-19	fontcm	Computer Modern font for use with extrafont package
2014-03-19	PKreport	A reporting pipeline for checking population pharmacokinetic model assumption
2014-03-17	IPMpack	Builds and analyses Integral Projection Models (IPMs)
2014-03-17	uplift	Uplift Modeling
2014-03-15	sbioPN	sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets
2014-03-15	ssmrob	Robust estimation and inference in sample selection models
2014-03-14	gof	Model-diagnostics based on cumulative residuals
2014-03-14	pensim	Simulation of high-dimensional data and parallelized repeated penalized regression
2014-03-14	ykmeans	K-means using a target variable
2014-03-13	PharmPow	Pharmacometric Power calculations for mixed study designs
2014-03-12	binomlogit	Efficient MCMC for Binomial Logit Models
2014-03-12	itertools	Iterator Tools
2014-03-12	LIStest	Tests of independence based on the Longest Increasing Subsequence
2014-03-12	normtest	Tests for Normality
2014-03-12	plotMCMC	MCMC Diagnostic Plots
2014-03-11	MEMSS	Data sets from Mixed-effects Models in S
2014-03-11	mlmRev	Examples from Multilevel Modelling Software Review
2014-03-11	SASmixed	Data sets from "SAS System for Mixed Models"
2014-03-10	hqmisc	Miscellaneous convenience functions and dataset
2014-03-10	XML2R	EasieR XML data collection
2014-03-09	BurStFin	Burns Statistics Financial
2014-03-09	gpairs	gpairs: The Generalized Pairs Plot
2014-03-09	regsubseq	Detect and Test Regular Sequences and Subsequences
2014-03-07	geneSignatureFinder	A Gene-signatures finder tools
2014-03-07	gptk	Gaussian Processes Tool-Kit
2014-03-07	Jmisc	Julian Miscellaneous Function
2014-03-07	svyPVpack	A package for complex surveys including plausible values
2014-03-06	bdpv	Inference and design for predictive values in binary diagnostic tests
2014-03-06	covreg	A simultaneous regression model for the mean and covariance
2014-03-06	eiwild	Ecological Inference with individual and aggregate data
2014-03-06	flowfield	Forecasts future values of a univariate time series
2014-03-06	mixRasch	Mixture Rasch Models with JMLE
2014-03-05	bagRboostR	Ensemble bagging and boosting classifiers
2014-03-05	FDRreg	False discovery rate regression
2014-03-05	hbim	Hill/Bliss Independence Model for Combination Vaccines
2014-03-05	inarmix	Mixture models for longitudinal count data
2014-03-04	bioPN	Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets
2014-03-04	insol	Solar Radiation
2014-03-04	Table1Heatmap	Table 1 Heatmap
2014-03-03	ICGE	Estimation of number of clusters and identification of atypical units
2014-03-03	simFrame	Simulation framework
2014-03-03	SSsimple	State space models
2014-03-03	widals	Weighting by Inverse Distance with Adaptive Least Squares for Massive Space-Time Data
2014-03-02	optimbase	R port of the Scilab optimbase module
2014-03-02	partitionMetric	Compute a distance metric between two partitions of a set
2014-03-02	svDialogstcltk	SciViews GUI API - Dialog boxes using Tcl/Tk
2014-03-02	svHttp	SciViews GUI API - R HTTP server
2014-03-02	svSocket	SciViews GUI API - R Socket Server
2014-03-02	svUnit	SciViews GUI API - Unit testing
2014-03-01	aqr	Interface methods to use with an ActiveQuant Master Server
2014-03-01	mcll	Monte Carlo Local Likelihood Estimation
2014-02-28	bPeaks	bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
2014-02-28	morgenstemning	Color schemes compatible with red-green color perception difficulties
2014-02-27	GDELTtools	Download, slice, and normalize GDELT data
2014-02-27	panelAR	Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation
2014-02-26	ALKr	Generate Age-Length Keys for fish populations
2014-02-26	pencopula	Flexible Copula Density Estimation with Penalized Hierarchical B-Splines
2014-02-26	rvgtest	Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
2014-02-26	snp.plotter	snp.plotter
2014-02-25	SimuChemPC	Simulation process of 4 selection methods in predicting chemical potent compounds
2014-02-24	fractaldim	Estimation of fractal dimensions
2014-02-24	gridBase	Integration of base and grid graphics
2014-02-24	mvc	Multi-View Clustering
2014-02-24	RegClust	Cluster analysis via regression coefficients
2014-02-24	RYoudaoTranslate	R package provide functions to translate English words into Chinese
2014-02-22	blender	Analyze biotic homogenization of landscapes
2014-02-22	bursts	Markov model for bursty behavior in streams
2014-02-22	hcci	Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap)
2014-02-22	plumbr	Mutable and dynamic data models
2014-02-21	arf3DS4	Activated Region Fitting, fMRI data analysis (3D)
2014-02-21	eulerian	eulerian: A package to find eulerian paths from graphs
2014-02-21	lpmodeler	Modeler for linear programs (LP) and mixed integer linear programs (MILP)
2014-02-21	ncdf4.helpers	Helper functions for use with the ncdf4 package
2014-02-21	SPAr	Perform rare variants association analysis based on summation of partition approaches
2014-02-21	zendeskR	Zendesk API Wrapper
2014-02-20	lorec	LOw Rand and sparsE Covariance matrix estimation
2014-02-20	OLScurve	OLS growth curve trajectories
2014-02-20	RFreak	R/FrEAK interface
2014-02-19	mGSZ	Gene set analysis based on GSZ-scoring function and asymptotic p-value
2014-02-17	edeR	Email Data Extraction Using R
2014-02-17	praktikum	Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu
2014-02-17	RcmdrPlugin.pointG	Graphical POINT of view for questionnaire data Rcmdr Plug-In
2014-02-17	turner	Turn vectors and lists of vectors into indexed structures
2014-02-16	DTComPair	Comparison of Binary Diagnostic Tests in a Paired Study Design
2014-02-16	sdtoolkit	Scenario Discovery Tools to Support Robust Decision Making
2014-02-15	CRAC	Cosmology R Analysis Code
2014-02-14	prospectr	Miscellaneous functions for processing and sample selection of vis-NIR diffuse reflectance data
2014-02-14	surface	Fitting Hansen Models to Investigate Convergent Evolution
2014-02-13	rsae	Robust Small Area Estimation
2014-02-13	wrspathrow	Functions for working with Worldwide Reference System (WRS)
2014-02-12	bio.infer	Predict environmental conditions from biological observations
2014-02-12	mcr	Method Comparison Regression
2014-02-12	QCGWAS	Quality Control of Genome Wide Association Study results
2014-02-12	SAM	Sparse Additive Modelling
2014-02-12	wrspathrowData	Data used by the wrspathrow package
2014-02-11	chromoR	Analysis of chromosomal interactions data (correction, segmentation and comparison)
2014-02-11	HMMCont	Hidden Markov Model for Continuous Observations Processes
2014-02-10	npst	Generalization of Hewitt's Seasonality Test
2014-02-07	cpca	Methods to perform Common Principal Component Analysis (CPCA)
2014-02-07	gpr	A Minimalistic package to apply Gaussian Process in R
2014-02-07	Ruchardet	R package to detect character encoding
2014-02-05	paf	Attributable Fraction Function for Censored Survival Data
2014-02-03	MetABEL	Meta-analysis of genome-wide SNP association results
2014-02-01	vbdm	Variational Bayes Discrete Mixture Model
2014-01-31	EMD	Empirical Mode Decomposition and Hilbert Spectral Analysis
2014-01-31	SBSA	Simplified Bayesian Sensitivity Analysis
2014-01-30	pSI	Specificity Index Statistic
2014-01-29	VoxR	Metrics extraction of trees from T-LiDAR data
2014-01-28	CVcalibration	Estimation of the Calibration Equation with Error-in Observations
2014-01-28	RapidPolygonLookup	Polygon lookup using kd trees
2014-01-27	ebal	Entropy reweighting to create balanced samples
2014-01-27	MergeGUI	A GUI for Merging Datasets in R
2014-01-27	Synth	Synthetic Control Group Method for Comparative Case Studies
2014-01-26	sqliter	Connection wrapper to SQLite databases
2014-01-25	PEMM	A Penalized EM algorithm incorporating missing-data mechanism
2014-01-24	gconcord	Concord method for Graphical Model Selection
2014-01-24	LSC	Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data
2014-01-23	interval	Weighted Logrank Tests and NPMLE for interval censored data
2014-01-23	jpeg	Read and write JPEG images
2014-01-23	saws	Small-Sample Adjustments for Wald tests Using Sandwich Estimators
2014-01-23	sigclust	Statistical Significance of Clustering
2014-01-22	BayesSingleSub	Computation of Bayes factors for interrupted time-series designs
2014-01-22	Gammareg	classic gamma regression: joint modeling of mean and shape parameters
2014-01-22	psyphy	Functions for analyzing psychophysical data in R
2014-01-22	rateratio.test	Exact rate ratio test
2014-01-21	gvlma	Global Validation of Linear Models Assumptions
2014-01-20	HUM	compute HUM value and visualize ROC curves
2014-01-19	blockmatrix	blockmatrix: Tools to solve algebraic systems with partitioned matrices
2014-01-19	ldbounds	Lan-DeMets Method for Group Sequential Boundaries
2014-01-19	mfx	Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
2014-01-19	RTextTools	Automatic Text Classification via Supervised Learning
2014-01-19	simexaft	simexaft
2014-01-18	HBSTM	Hierarchical Bayesian Space-Time models for Gaussian space-time data
2014-01-17	SCORER2	SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences
2014-01-17	wpp2008	World Population Prospects 2008
2014-01-16	dfexplore	Explore data.frames by plotting NA and classes of each variable
2014-01-16	multinbmod	Regression analysis of overdispersed correlated count data
2014-01-15	clustsig	Significant Cluster Analysis
2014-01-15	Funclustering	A package for functional data clustering
2014-01-14	iDynoR	R Analysis package for iDynoMiCS Simulation Results
2014-01-14	linkim	Linkage information based genotype imputation method
2014-01-14	RockFab	Rock fabric and strain analysis tools
2014-01-13	MF	Mitigated Fraction
2014-01-13	TimeMachine	Time Machine
2014-01-11	DSBayes	Bayesian subgroup analysis in clinical trials
2014-01-10	citbcmst	CIT Breast Cancer Molecular SubTypes Prediction
2014-01-10	citccmst	CIT Colon Cancer Molecular SubTypes Prediction
2014-01-10	jointPm	Risk estimation using the joint probability method
2014-01-10	networkTomography	Tools for network tomography
2014-01-10	plRasch	Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation
2014-01-10	poLCA	Polytomous variable Latent Class Analysis
2014-01-09	cwm	Cluster Weighted Models by EM algorithm
2014-01-09	dagR	R functions for directed acyclic graphs
2014-01-09	gpmap	Analysing and plotting genotype-phenotype maps
2014-01-07	rapportools	Miscellaneous (stats) helper functions with sane defaults for reporting
2014-01-06	robcor	Robust Correlations
2014-01-06	sfa	Stochastic Frontier Analysis
2014-01-06	TeachNet	Fits neural networks to learn about back propagation
2014-01-05	RClimMAWGEN	RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations
2014-01-04	DESnowball	Bagging with Distance-based Regression for Differential Gene Expression Analyses
2014-01-04	SWATmodel	A multi-OS implementation of the TAMU SWAT model
2014-01-02	binom	Binomial Confidence Intervals For Several Parameterizations
2014-01-02	BioGeoBEARS	BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
2014-01-02	FAMT	Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data
2014-01-02	PedCNV	An implementation for association analysis with CNV data
2014-01-02	robustgam	Robust Estimation for Generalized Additive Models
2014-01-01	mmm	an R package for analyzing multivariate longitudinal data with multivariate marginal models
2014-01-01	PLRModels	Statistical inference in partial linear regression models
2013-12-31	missForest	Nonparametric Missing Value Imputation using Random Forest
2013-12-31	mmm2	Multivariate marginal models with shared regression parameters
2013-12-31	TiddlyWikiR	Create dynamic reports using a TiddlyWiki template
2013-12-30	dtt	Discrete Trigonometric Transforms
2013-12-30	mblm	Median-Based Linear Models
2013-12-30	moonsun	Basic astronomical calculations with R
2013-12-30	seawaveQ	U.S. Geological Survey seawaveQ model
2013-12-28	acm4r	Align-and-Count Method comparisons of RFLP data
2013-12-28	rgabriel	Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot
2013-12-27	extfunnel	Additional Funnel Plot Augmentations
2013-12-27	ROC632	Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling
2013-12-27	saves	Fast load variables
2013-12-27	SIN	A SINful Approach to Selection of Gaussian Graphical Markov Models
2013-12-26	cpk	Clinical Pharmacokinetics
2013-12-26	mycobacrvR	Integrative immunoinformatics for Mycobacterial diseases in R platform
2013-12-24	evt0	Mean of order p, peaks over random threshold Hill and high quantile estimates
2013-12-24	RcmdrPlugin.sos	Efficiently search the R help pages
2013-12-24	safeBinaryRegression	Safe Binary Regression
2013-12-24	TSTutorial	Fitting and Predict Time Series Interactive Laboratory
2013-12-23	MigClim	Implementing dispersal into species distribution models
2013-12-23	SHIP	SHrinkage covariance Incorporating Prior knowledge
2013-12-21	pa	Performance Attribution for Equity Portfolios
2013-12-21	pmcgd	pmcgd
2013-12-19	AssotesteR	Statistical Tests for Genetic Association Studies
2013-12-19	BBRecapture	Bayesian Behavioural Capture-Recapture Models
2013-12-19	colortools	Tools for colors in a Hue-Saturation-Value (HSV) color model
2013-12-19	minPtest	Gene region-level testing procedure for SNP data, using the min P test resampling approach
2013-12-18	bvls	The Stark-Parker algorithm for bounded-variable least squares
2013-12-18	cellVolumeDist	Functions to fit cell volume distributions and thereby estimate cell growth rates and division times
2013-12-18	HWEBayes	Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing
2013-12-18	scalreg	Scaled sparse linear regression
2013-12-18	VHDClassification	Discrimination/Classification in very high dimension with linear and quadratic rules
2013-12-18	wavelets	A package of functions for computing wavelet filters, wavelet transforms and multiresolution analyses
2013-12-18	ycinterextra	Yield curve or zero-coupon prices interpolation and extrapolation
2013-12-17	g.data	Delayed-Data Packages
2013-12-17	iRefR	iRefIndex Manager
2013-12-17	reportRx	Tools for automatically generating reproducible clinical report
2013-12-16	RobRSVD	Robust Regularized Singular Value Decomposition
2013-12-15	fcd	Fused Community Detection
2013-12-15	lpc	Lassoed principal components for testing significance of features
2013-12-15	MVB	Mutivariate Bernoulli log-linear model
2013-12-15	svdvisual	SVD visualization tools
2013-12-14	DunnettTests	Software implementation of step-down and step-up Dunnett test procedures
2013-12-14	MiST	Mixed effects Score Test for continuous outcomes
2013-12-13	HIV.LifeTables	HIV calibrated model life tables for countries with generalized HIV epidemics
2013-12-13	logconcens	Maximum likelihood estimation of a log-concave density based on censored data
2013-12-13	Oncotree	Estimating oncogenetic trees
2013-12-13	skda	Sparse (Multicategory) Kernel Discriminant Analysis
2013-12-12	BACCO	Bayesian Analysis of Computer Code Output (BACCO)
2013-12-12	dmt	Dependency Modeling Toolkit
2013-12-12	languageR	Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics"
2013-12-12	mleur	Maximum likelihood unit root test
2013-12-12	sealasso	Standard Error Adjusted Adaptive Lasso
2013-12-11	etable	Easy Table
2013-12-11	ExPosition	Exploratory analysis with the singular value decomposition
2013-12-11	InPosition	Inference Tests for ExPosition
2013-12-11	mlogitBMA	Bayesian Model Averaging for Multinomial Logit Models
2013-12-11	rpartitions	Code for integer partitioning
2013-12-11	smfsb	SMfSB 2e: Stochastic Modelling for Systems Biology, second edition
2013-12-11	SOAR	Memory management in R by delayed assignments
2013-12-11	TExPosition	Two-table ExPosition
2013-12-11	TInPosition	Inference tests for TExPosition
2013-12-10	Bessel	Bessel – Bessel Functions Computations and Approximations
2013-12-10	conics	Plot Conics
2013-12-10	fxregime	Exchange Rate Regime Analysis
2013-12-10	pathmox	Pathmox Approach of Segmentation Trees in Partial Least Squares Path Modeling
2013-12-10	prettyGraphs	publication-quality graphics
2013-12-10	SII	Calculate ANSI S3.5-1997 Speech Intelligibility Index
2013-12-10	sparseLTSEigen	RcppEigen back end for sparse least trimmed squares regression
2013-12-09	calibrator	Bayesian calibration of complex computer codes
2013-12-09	DIME	DIME (Differential Identification using Mixture Ensemble)
2013-12-09	vrmlgen	Generate 3D visualizations for data exploration on the web
2013-12-08	approximator	Bayesian prediction of complex computer codes
2013-12-08	discrimARTs	Discrimination of Alternative Reproductive Tactics (ARTs)
2013-12-07	hflights	Flights that departed Houston in 2011
2013-12-07	sortinghat	sortinghat
2013-12-05	DynamicDistribution	Dynamically visualized probability distributions and their moments
2013-12-05	MaXact	Exact max-type Cochran-Armitage trend test(CATT)
2013-12-05	Sample.Size	Sample size calculation
2013-12-05	snpStatsWriter	Flexible writing of snpStats objects to flat files
2013-12-04	obs.agree	An R package to assess agreement between observers
2013-12-03	DEMEtics	Evaluating the genetic differentiation between populations based on Gst and D values
2013-12-03	Interpol.T	Hourly interpolation of multiple temperature daily series
2013-12-03	png	Read and write PNG images
2013-12-03	RCassandra	R/Cassandra interface
2013-12-02	GrassmannOptim	Grassmann Manifold Optimization
2013-12-02	PoiClaClu	Classification and clustering of sequencing data based on a Poisson model
2013-12-02	superMDS	Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011)
2013-12-01	exptest	Tests for Exponentiality
2013-11-29	cycloids	cycloids
2013-11-28	aml	Adaptive Mixed LASSO
2013-11-28	LCFdata	Data sets for package “LMERConvenienceFunctions”
2013-11-27	prognosticROC	Prognostic ROC curves for evaluating the predictive capacity of a binary test
2013-11-26	LICORS	Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data
2013-11-25	dils	Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links
2013-11-25	frontiles	Partial Frontier Efficiency Analysis
2013-11-25	humanFormat	Human-friendly formatting functions
2013-11-23	growthmodels	Nonlinear Growth Models
2013-11-22	GMMBoost	Likelihood-based Boosting for Generalized mixed models
2013-11-22	msgpackR	A library to serialize or unserialize data in MessagePack format
2013-11-21	osmar	OpenStreetMap and R
2013-11-21	PubBias	Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53
2013-11-19	mlDNA	Machine Learning-based Differential Network Analysis of Transcriptome Data
2013-11-19	somebm	some Brownian motions simulation functions
2013-11-19	VLF	Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records
2013-11-18	codadiags	Markov chain Monte Carlo burn-in based on "bridge" statistics
2013-11-18	eqs2lavaan	EQS Output Conversion to lavaan Functions
2013-11-18	MetStaT	Statistical metabolomics tools
2013-11-18	rbefdata	BEFdata R package
2013-11-17	vscc	Variable selection for clustering and classification
2013-11-16	grade	Binary Grading functions for R
2013-11-15	DiscriMiner	Tools of the Trade for Discriminant Analysis
2013-11-15	PropScrRand	Propensity score methods for assigning treatment in randomized trials
2013-11-14	maxent	Low-memory Multinomial Logistic Regression with Support for Text Classification
2013-11-14	tester	Tests and checks characteristics of R objects
2013-11-13	HaploSim	Functions to simulate haplotypes
2013-11-13	mreg	Fits regression models when the outcome is partially missing
2013-11-13	Rambo	The Random Subgraph Model
2013-11-12	colorfulVennPlot	Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data
2013-11-12	robustfa	An Object Oriented Solution for Robust Factor Analysis
2013-11-11	clv	Cluster Validation Techniques
2013-11-11	GenKern	Functions for generating and manipulating binned kernel density estimates
2013-11-11	rGammaGamma	Gamma convolutions for methylation array background correction
2013-11-09	aqfig	Functions to help display air quality model output and monitoring data
2013-11-09	dielectric	Defines some physical constants and dielectric functions commonly used in optics, plasmonics
2013-11-06	learningr	Data and functions to accompany the book "Learning R"
2013-11-06	RGenetics	R packages for genetics research
2013-11-05	comparison	Multivariate likelihood ratio calculation and evaluation
2013-11-05	sspline	Smoothing Splines on the Sphere
2013-11-04	gskat	GEE_KM
2013-11-04	ktsolve	Configurable function for solving families of nonlinear equations
2013-11-04	matie	Measuring Association and Testing Independence Efficiently
2013-11-04	mvShapiroTest	Generalized Shapiro-Wilk test for multivariate normality
2013-11-04	someMTP	Some Multiple Testing Procedures
2013-11-03	pedigree	Pedigree functions
2013-11-02	prinsimp	Finding and plotting simple basis vectors for multivariate data
2013-11-01	PAGI	The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways
2013-11-01	rgcvpack	R Interface for GCVPACK Fortran Package
2013-10-31	ACD	Categorical data analysis with complete or missing responses
2013-10-31	gllm	Generalised log-linear model
2013-10-31	lmf	Functions for estimation and inference of selection in age-structured populations
2013-10-31	MRsurv	A multiplicative-regression model for relative survival
2013-10-31	sExtinct	Calculates the historic date of extinction given a series of sighting events
2013-10-29	cluster.datasets	Cluster Analysis Data Sets
2013-10-25	CARrampsOcl	Reparameterized and marginalized posterior sampling for conditional autoregressive models, OpenCL implementation
2013-10-25	DCL	Claims Reserving under the Double Chain Ladder Model
2013-10-25	dgof	Discrete Goodness-of-Fit Tests
2013-10-25	kmconfband	Kaplan-Meier Simultaneous Confidence Band for the Survivor Function
2013-10-25	SPARQL	SPARQL client
2013-10-24	BASIX	BASIX: An efficient C/C++ toolset for R
2013-10-24	mcgibbsit	Warnes and Raftery's MCGibbsit MCMC diagnostic
2013-10-23	fbRanks	Association Football (Soccer) Ranking via Poisson Regression
2013-10-23	globalGSA	Global Gene-Set Analysis for Association Studies
2013-10-23	MFHD	Multivariate Functional Halfspace Depth
2013-10-22	HDtweedie	The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm
2013-10-22	Rmisc	Rmisc: Ryan Miscellaneous
2013-10-22	smart	Sparse Multivariate Analysis via Rank Transformation
2013-10-22	snapshot	Gadget N-body cosmological simulation code snapshot I/O utilities
2013-10-22	sphereplot	Spherical plotting
2013-10-21	lomb	Lomb-Scargle Periodogram
2013-10-21	mQTL	Metabolomic Quantitative Trait Locus Mapping
2013-10-17	RTConnect	Tools for analyzing sales report files of iTunes Connect
2013-10-16	DAAGxtras	Data Sets and Functions, supplementary to DAAG
2013-10-16	NormalGamma	Normal-gamma convolution model
2013-10-15	cvq2	Calculate the predictive squared correlation coefficient
2013-10-15	zoom	A spatial data visualization tool
2013-10-13	Correlplot	A collection of functions for graphing correlation matrices
2013-10-13	shinyRGL	Shiny Wrappers for RGL
2013-10-12	cpa	Confirmatory Path Analysis through the d-sep tests
2013-10-12	mcGlobaloptim	Global optimization using Monte Carlo and Quasi Monte Carlo simulation
2013-10-11	GlobalDeviance	Global Deviance Permutation Tests
2013-10-11	MRwarping	Multiresolution time warping for functional data
2013-10-11	OptHedging	Estimation of value and hedging strategy of call and put options
2013-10-09	ScrabbleScore	Calculates Scrabble score for strings
2013-10-08	bmem	Mediation analysis with missing data using bootstrap
2013-10-08	caroline	A Collection of Database, Data Structure, Visualization, and Utility Functions for R
2013-10-07	censNID	censored NID samples
2013-10-07	migration.indices	Migration indices
2013-10-04	kitagawa	Spectral response of water wells to harmonic strain and pressure
2013-10-04	TDD	Time-Domain Deconvolution of Seismometer Response
2013-10-01	kulife	Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen
2013-10-01	PsumtSim	Simulations of grouped responses relative to baseline
2013-09-30	AUC	Threshold independent performance measures for probabilistic classifiers
2013-09-30	LCA	Localised Co-Dependency Analysis
2013-09-30	ParentOffspring	Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
2013-09-30	topsis	TOPSIS method for multiple-criteria decision making (MCDM)
2013-09-27	BAYSTAR	On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
2013-09-27	FitARMA	FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
2013-09-26	ssvd	Sparse SVD
2013-09-25	SubCultCon	Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
2013-09-24	NPHMC	Sample Size Calculation for the Proportional Hazards Mixture Cure Model
2013-09-23	animalTrack	Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data
2013-09-23	EffectsRelBaseline	Test changes of a grouped response relative to baseline
2013-09-23	hzar	Hybrid Zone Analysis using R
2013-09-23	LSMonteCarlo	American options pricing with Least Squares Monte Carlo method
2013-09-23	SAMURAI	Sensitivity Analysis of a Meta-analysis with Unpublished but Registered Analytical Investigations
2013-09-22	AtelieR	A GTK GUI for teaching basic concepts in statistical inference, and doing elementary bayesian tests
2013-09-21	dataQualityR	Performs variable level data quality checks and generates summary statistics
2013-09-20	svapls	Surrogate variable analysis using partial least squares in a gene expression study
2013-09-19	prLogistic	Estimation of Prevalence Ratios using Logistic Models
2013-09-19	zyp	Zhang + Yue-Pilon trends package
2013-09-17	GABi	Framework for Generalized Subspace Pattern Mining
2013-09-16	R4dfp	4dfp MRI Image Read and Write Routines
2013-09-16	SMCRM	Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012)
2013-09-16	speccalt	Alternative spectral clustering, with automatic estimation of k
2013-09-16	yhat	Interpreting Regression Effects
2013-09-15	forensim	Statistical tools for the interpretation of forensic DNA mixtures
2013-09-15	GPCSIV	GPCSIV, Generalized Principal Component of Symbolic Interval variables
2013-09-14	EILA	Efficient Inference of Local Ancestry
2013-09-14	RcmdrPlugin.qual	Rcmdr plugin for quality control course
2013-09-13	Daim	Diagnostic accuracy of classification models
2013-09-13	EcoTroph	EcoTroph R package
2013-09-12	logcondens.mode	Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode
2013-09-11	pastis	Phylogenetic Assembly with Soft Taxonomic Inferences
2013-09-10	calibrate	Calibration of Scatterplot and Biplot Axes
2013-09-10	FREQ	FREQ: Estimate population size from capture frequencies
2013-09-09	DendSer	Dendrogram seriation: ordering for visualisation
2013-09-08	ttwa	Travel To Work Area
2013-09-07	ALSCPC	Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form
2013-09-05	CommonTrend	Extract and plot common trends from a cointegration system. Calculate P-value for Johansen Statistics
2013-09-05	G1DBN	A package performing Dynamic Bayesian Network inference
2013-09-04	tiff	Read and write TIFF images
2013-09-03	expoTree	Calculate density dependent likelihood of a phylogenetic tree
2013-09-03	genetics	Population Genetics
2013-09-03	inlinedocs	Convert inline comments to documentation
2013-09-03	RFGLS	Rapid Feasible Generalized Least Squares
2013-09-03	sparc	Semiparametric Generalized Linear Models
2013-09-02	scrime	Analysis of High-Dimensional Categorical Data such as SNP Data
2013-09-02	tabplotd3	Tabplotd3, interactive inspection of large data
2013-08-30	fExpressCertificates	fExpressCertificates - Structured Products Valuation for ExpressCertificates/Autocallables
2013-08-30	genMOSSplus	Application of MOSS algorithm to genome-wide association study (GWAS)
2013-08-29	automap	Automatic interpolation package
2013-08-28	RStorm	Simulate and Develop Streaming Processing in [R]
2013-08-27	VaRES	Computes value at risk and expected shortfall for over 100 parametric distributions
2013-08-26	dbEmpLikeGOF	Goodness-of-fit and two sample comparison tests using sample entropy
2013-08-26	epoc	EPoC (Endogenous Perturbation analysis of Cancer)
2013-08-23	corTools	Tools for processing data after a Genome Wide Association Study
2013-08-23	RcmdrPlugin.sampling	Tools for sampling in Official Statistical Surveys
2013-08-23	rtematres	The rtematres API package
2013-08-23	tlemix	Trimmed Maximum Likelihood Estimation
2013-08-22	fds	Functional data sets
2013-08-22	Rjpstatdb	R interface of the Gateway to Advanced and User-friendly Statistics Service
2013-08-22	ssfit	Fitting of parametric models using summary statistics
2013-08-21	kmlcov	Clustering longitudinal data using the likelihood as a metric of distance
2013-08-21	RepeatedHighDim	Global tests for expression data of high-dimensional sets of molecular features
2013-08-21	Rserve	Binary R server
2013-08-21	SOLOMON	Parentage analysis
2013-08-20	phenmod	Auxiliary functions for phenological data processing, modelling and result handling
2013-08-20	SEchart	SEchart
2013-08-19	protiq	Protein (identification and) quantification based on peptide evidence
2013-08-19	SynchWave	Synchrosqueezed Wavelet Transform
2013-08-19	vwr	Useful functions for visual word recognition research
2013-08-17	bitops	Bitwise Operations
2013-08-17	condGEE	Parameter estimation in conditional GEE for recurrent event gap times
2013-08-17	profileModel	Tools for profiling inference functions for various model classes
2013-08-16	blm	Binomial linear and linear-expit regression
2013-08-16	CNVassocData	Example data sets for association analysis of CNV data
2013-08-16	JOP	Joint Optimization Plot
2013-08-16	PCS	Calculate the probability of correct selection (PCS)
2013-08-16	relaxnet	Relaxation of glmnet models (as in relaxed lasso, Meinshausen 2007)
2013-08-14	covTest	Computes covariance test for adaptive linear modelling
2013-08-14	IntLik	Numerical Integration for Integrated Likelihood
2013-08-13	EasyHTMLReport	EasyHTMLReport
2013-08-13	ES	Edge Selection
2013-08-13	RFinanceYJ	RFinanceYJ
2013-08-12	rLindo	R Interface to LINDO API
2013-08-09	mallet	A wrapper around the Java machine learning tool MALLET
2013-08-08	DMwR	Functions and data for "Data Mining with R"
2013-08-08	miRada	MicroRNA Microarray Data Analysis
2013-08-04	CompLognormal	Functions for actuarial scientists
2013-08-04	lmeSplines	Add smoothing spline modelling capability to nlme
2013-08-04	nlmeU	Datasets and utility functions enhancing functionality of nlme package
2013-08-03	tipom	Automated measure-based classification for flint tools
2013-08-02	AMGET	Post-processing tool for ADAPT 5
2013-08-02	dfcrm	Dose-finding by the continual reassessment method
2013-08-02	ltsbase	Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method
2013-08-02	timesboot	Bootstrap computations for time series objects
2013-08-01	compactr	Creates empty plots with compact axis notation
2013-08-01	rbmn	Handling Linear Gaussian Bayesian Networks
2013-07-31	acopula	Modelling dependence with multivariate Archimax (or any user-defined continuous) copulas
2013-07-31	gPCA	Batch Effect Detection via Guided Principal Components Analysis
2013-07-31	needy	needy
2013-07-31	SparseGrid	Sparse grid integration in R
2013-07-30	COBRA	Nonlinear Aggregation of Predictors
2013-07-30	Lambda4	Collection of Internal Consistency Reliability Coefficients
2013-07-29	pathdiagram	Basic functions for drawing path diagrams
2013-07-29	widenet	Penalized Regression with Polynomial Basis Expansions
2013-07-28	MPINet	The package can implement the network-based metabolite pathway identification of pathways
2013-07-28	pwt	Penn World Table (Versions 5.6, 6.x, 7.x)
2013-07-27	eigenprcomp	Computes confidence intervals for principal components
2013-07-25	AnDE	An extended Bayesian Learning Technique developed by Dr. Geoff Webb
2013-07-24	hint	Tools for hypothesis testing based on Hypergeometric Intersection distributions
2013-07-24	RxCEcolInf	R x C Ecological Inference With Optional Incorporation of Survey Information
2013-07-23	neuroblastoma	Neuroblastoma copy number profiles
2013-07-22	somplot	Visualisation of hexagonal Kohonen maps
2013-07-22	wordmatch	Matches words in one file with words in another file
2013-07-21	mondate	Keep track of dates in terms of months
2013-07-21	suRtex	LaTeX descriptive statistic reporting for survey data
2013-07-17	maRketSim	Market simulator for R
2013-07-16	LogrankA	Logrank Test for Aggregated Survival Data
2013-07-16	QSARdata	Quantitative Structure Activity Relationship (QSAR) Data Sets
2013-07-14	gpk	100 Data Sets for Statistics Education
2013-07-12	desire	Desirability functions in R
2013-07-11	DistatisR	DiSTATIS Three Way Metric Multidimensional Scaling
2013-07-11	optBiomarker	Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules
2013-07-11	switchnpreg	Switching nonparametric regression models for a single curve and functional data
2013-07-10	MDM	Multinomial Diversity Model
2013-07-09	portfolioSim	Framework for simulating equity portfolio strategies
2013-07-09	VDA	VDA
2013-07-06	smoothie	Two-dimensional Field Smoothing
2013-07-04	ExactCIdiff	Inductive Confidence Intervals for the difference between two proportions
2013-07-02	clusterGenomics	Identifying clusters in genomics data by recursive partitioning
2013-07-02	retimes	Reaction Time Analysis
2013-07-01	DTK	Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
2013-07-01	pathClass	Classification using biological pathways as prior knowledge
2013-06-28	FField	Force field simulation for a set of points
2013-06-28	loglognorm	Double log normal distribution functions
2013-06-28	r2dRue	2d Rain Use Efficience model
2013-06-27	b6e6rl	Adaptive differential evolution, b6e6rl variant
2013-06-27	itree	Tools for classification and regression trees, with an emphasis on interpretability
2013-06-24	tsModel	Time Series Modeling for Air Pollution and Health
2013-06-23	crrSC	Competing risks regression for Stratified and Clustered data
2013-06-21	ArrayBin	Binarization of numeric data arrays
2013-06-19	gwrr	Fits geographically weighted regression models with diagnostic tools
2013-06-19	MConjoint	Conjoint Analysis through Averaging of Multiple Analyses
2013-06-19	SmithWilsonYieldCurve	Smith-Wilson Yield Curve Construction
2013-06-18	aods3	Analysis of Overdispersed Data using S3 methods
2013-06-18	glmlep	Fit GLM with LEP-based penalized maximum likelihood
2013-06-18	rsgcc	Gini methodology-based correlation and clustering analysis of microarray and RNA-Seq gene expression data
2013-06-17	Bolstad2	Bolstad functions
2013-06-17	MCPerm	A Monte Carlo permutation method for multiple test correlation
2013-06-17	twiddler	Interactive manipulation of R expressions
2013-06-16	nsga2R	Elitist Non-dominated Sorting Genetic Algorithm based on R
2013-06-15	MExPosition	Multi-table ExPosition
2013-06-13	depthTools	Depth Tools Package
2013-06-13	govStatJPN	functions to get public survey data in Japan
2013-06-13	PDSCE	Positive definite sparse covariance estimators
2013-06-13	RcmdrPlugin.depthTools	R commander Depth Tools Plug-In
2013-06-12	SoDA	Functions and Examples for "Software for Data Analysis"
2013-06-11	tbdiag	Functions for tuberculosis diagnostics research
2013-06-10	cabootcrs	Bootstrap Confidence Regions for Correspondence Analysis
2013-06-10	covLCA	Latent Class Models with Covariate Effects on Underlying and Measured Variables
2013-06-10	sparktex	Generate LaTeX sparklines in R
2013-06-08	lshorth	The Length of the Shorth
2013-06-08	pbs	Periodic B Splines
2013-06-06	IUPS	Incorporating Uncertainties in Propensity Scores
2013-06-04	FGalgorithm	Flury and Gautschi algorithms
2013-06-04	mopsocd	MOPSOCD: Multi-objective Particle Swarm Optimization with Crowding Distance
2013-06-04	NPMVCP	Nonparametric Multivariate Change Point Model
2013-06-04	RSADBE	Data related to the book "R Statistical Application Development by Example"
2013-06-03	ahaz	Regularization for semiparametric additive hazards regression
2013-06-03	RobustRankAggreg	Methods for robust rank aggregation
2013-06-03	TrialSize	R functions in Chapter 3,4,6,7,9,10,11,12,14,15
2013-05-31	protoclass	Interpretable classification with prototypes
2013-05-29	OneTwoSamples	Deal with one and two (normal) samples
2013-05-28	CoinMinD	Simultaneous Confidence Interval for Multinomial Proportion
2013-05-28	DTMCPack	Suite of functions related to discrete-time discrete-state Markov Chains
2013-05-28	fitTetra	fitTetra is an R package for assigning tetraploid genotype scores
2013-05-28	RVtests	Rare Variant Tests
2013-05-27	compareODM	comparison of medical forms in CDISC ODM format
2013-05-26	ggROC	package for roc curve plot with ggplot2
2013-05-26	McSpatial	Nonparametric spatial data analysis
2013-05-25	profdpm	Profile Dirichlet Process Mixtures
2013-05-24	BSquare	Bayesian Simultaneous Quantile Regression
2013-05-24	lbiassurv	Length-biased correction to survival curve estimation
2013-05-23	InferenceSMR	Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival
2013-05-23	SODC	Optimal Discriminant Clustering(ODC) and Sparse Optimal Discriminant Clustering(SODC)
2013-05-22	cyphid	Cycle and Phase Identification for mastication data
2013-05-22	parallelize.dynamic	Automate parallelization of function calls by means of dynamic code analysis
2013-05-22	trueskill	Implementation the TrueSkill algorithm in R
2013-05-20	pom	POM - Patch Occupancy Models
2013-05-19	pnmtrem	Probit-Normal Marginalized Transition Random Effects Models
2013-05-19	probsvm	probsvm: Class probability estimation for Support Vector Machines
2013-05-18	CfEstimateQuantiles	Estimate quantiles using any order Cornish-Fisher expansion
2013-05-18	SMFI5	R functions and data from Chapter 5 of 'Statistical Methods for Financial Engineering'
2013-05-17	CDLasso	Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression
2013-05-16	biglm	bounded memory linear and generalized linear models
2013-05-16	grnn	General regression neural network
2013-05-16	PurBayes	Bayesian Estimation of Tumor Purity and Clonality
2013-05-15	Nozzle.R1	Nozzle Reports
2013-05-15	RDSTK	An R wrapper for the Data Science Toolkit API
2013-05-13	csSAM	csSAM - cell-specific Significance Analysis of Microarrays
2013-05-13	hgam	High-dimensional Additive Modelling
2013-05-11	ergmharris	Local Health Department network data set
2013-05-10	ArDec	Time series autoregressive-based decomposition
2013-05-10	CoxBoost	Cox models by likelihood based boosting for a single survival endpoint or competing risks
2013-05-10	GAMBoost	Generalized linear and additive models by likelihood based boosting
2013-05-09	NHEMOtree	Non-hierarchical evolutionary multi-objective tree learner to perform cost-sensitive classification
2013-05-09	timeline	Timelines for a Grammar of Graphics
2013-05-09	wpp2010	World Population Prospects 2010
2013-05-08	lisrelToR	Import output from LISREL into R
2013-05-07	corrsieve	CorrSieve
2013-05-07	InteractiveIGraph	interactive network analysis and visualization
2013-05-07	pnn	Probabilistic neural networks
2013-05-06	GibbsACOV	Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
2013-05-04	HydroMe	R codes for estimating water retention and infiltration model parameters using experimental data
2013-05-03	diffdepprop	Calculates Confidence Intervals for two Dependent Proportions
2013-05-03	iteRates	Parametric rate comparison
2013-05-03	mixsep	Forensic Genetics DNA Mixture Separation
2013-05-02	RAP	Reversal Association Pattern
2013-04-29	tseriesChaos	Analysis of nonlinear time series
2013-04-28	whisker	{{mustache}} for R, logicless templating
2013-04-27	MicroStrategyR	MicroStrategyR Package
2013-04-26	FuzzyToolkitUoN	Type 1 Fuzzy Logic Toolkit
2013-04-25	dbEmpLikeNorm	Test for joint assessment of normality
2013-04-25	hsmm	Hidden Semi Markov Models
2013-04-25	sendplot	Tool for sending interactive plots with tool-tip content
2013-04-24	DetSel	A computer program to detect markers responding to selection
2013-04-24	dirmult	Estimation in Dirichlet-Multinomial distribution
2013-04-24	lars	Least Angle Regression, Lasso and Forward Stagewise
2013-04-23	siar	Stable Isotope Analysis in R
2013-04-21	mgraph	Graphing map attributes and non-map variables in R
2013-04-20	cdb	Reading and Writing Constant DataBases
2013-04-20	ibdreg	Regression Methods for IBD Linkage With Covariates
2013-04-20	locfit	Local Regression, Likelihood and Density Estimation
2013-04-19	boussinesq	Analytic Solutions for (ground-water) Boussinesq Equation
2013-04-19	FrF2.catlg128	Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words
2013-04-18	glmdm	R Code for Simulation of GLMDM
2013-04-18	spikeslab	Prediction and variable selection using spike and slab regression
2013-04-17	catspec	Special models for categorical variables
2013-04-17	CheckDigit	Calculate and verify check digits
2013-04-17	decon	Deconvolution Estimation in Measurement Error Models
2013-04-17	GAIPE	Graphical Extension with Accuracy in Parameter Estimation (GAIPE)
2013-04-17	mvbutils	Workspace organization, code and documentation editing, package prep and editing, etc
2013-04-17	quadprog	Functions to solve Quadratic Programming Problems
2013-04-16	appell	Compute Appell's F1 hypergeometric function
2013-04-16	JGL	Performs the Joint Graphical Lasso for sparse inverse covariance estimation on multiple classes
2013-04-16	spacejam	Sparse conditional graph estimation with joint additive models
2013-04-13	DeducerSpatial	Deducer for spatial data analysis
2013-04-12	glmulti	Model selection and multimodel inference made easy
2013-04-12	logging	R logging package
2013-04-12	orderbook	Orderbook visualization/Charting software
2013-04-12	sideChannelAttack	Side Channel Attack
2013-04-10	clinUtiDNA	Clinical Utility of DNA Testing
2013-04-10	deseasonalize	Optimal deseasonalization for geophysical time series using AR fitting
2013-04-09	phcfM	Modelling anthropogenic deforestation
2013-04-09	rbugs	Fusing R and OpenBugs and Beyond
2013-04-08	df2json	Convert a dataframe to JSON
2013-04-08	peperr	Parallelised Estimation of Prediction Error
2013-04-08	survIDINRI	IDI and NRI for comparing competing risk prediction models with censored survival data
2013-04-07	SportsAnalytics	Infrastructure for Sports Analytics
2013-04-05	persiandictionary	English to Persian dictionary
2013-04-05	PlotRegionHighlighter	Creates an envelope that surrounds a set of points plotted in a two dimensional space
2013-04-04	BaySIC	Bayesian Analysis of Significantly Mutated Genes in Cancer
2013-04-03	ncbit	retrieve and build NBCI taxonomic data
2013-04-03	noweb	Noweb system for R
2013-04-03	trioGxE	A data smoothing approach to explore and test gene-environment interaction in case-parent trio data
2013-04-02	ENmisc	Neuwirth miscellaneous
2013-04-02	infutil	Information Utility
2013-04-02	MLEcens	Computation of the MLE for bivariate (interval) censored data
2013-04-02	SGL	Fit a GLM (or cox model) with a combination of lasso and group lasso regularization
2013-04-02	SPIn	Simulation-efficient Shortest Probability Intervals
2013-04-01	gpclib	General Polygon Clipping Library for R
2013-04-01	optAUC	Optimal Combinations of Diagnostic Tests Based on AUC
2013-03-28	ICE	Iterated Conditional Expectation
2013-03-28	sprsmdl	Sparse modeling toolkit
2013-03-27	meteogRam	Tools for plotting meteograms
2013-03-27	severity	Mayo's Post-data Severity Evaluation
2013-03-26	HI	Simulation from distributions supported by nested hyperplanes
2013-03-25	HAP.ROR	Recursive Organizer (ROR)
2013-03-25	hashFunction	A collection of non-cryptographic hash functions
2013-03-23	flsa	Path algorithm for the general Fused Lasso Signal Approximator
2013-03-23	hcc	Hidden correlation check
2013-03-22	orientlib	Support for orientation data
2013-03-21	MSeasyTkGUI	MSeasy Tcl/Tk Graphical User Interface
2013-03-20	DATforDCEMRI	Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
2013-03-20	MSeasy	Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS) data
2013-03-20	rCarto	This package builds maps with a full cartographic layout
2013-03-19	BiplotGUI	Interactive Biplots in R
2013-03-19	DeducerExtras	Additional dialogs and functions for Deducer
2013-03-19	tpe	Tree preserving embedding
2013-03-18	crossdes	Construction of Crossover Designs
2013-03-18	marqLevAlg	An algorithm for least-squares curve fitting
2013-03-16	FitAR	Subset AR Model Fitting
2013-03-14	BlockMessage	Creates strings that show a text message in 8 by 8 block letters
2013-03-14	fpp	Data for "Forecasting: principles and practice"
2013-03-14	GriegSmith	Uses Grieg-Smith method on 2 dimentional spatial data
2013-03-14	hsicCCA	Canonical Correlation Analysis based on Kernel Independence Measures
2013-03-13	BayHap	Bayesian analysis of haplotype association using Markov Chain Monte Carlo
2013-03-13	perry	Resampling-based prediction error estimation for regression models
2013-03-12	ber	Batch Effects Removal
2013-03-12	kappaSize	Sample Size Estimation Functions for Studies of Interobserver Agreement
2013-03-11	cosso	Fit Regularized Nonparametric Regression Models Using COSSO Penalty
2013-03-11	patchPlot	Scatterplots of image patches
2013-03-08	BBMM	Brownian bridge movement model
2013-03-08	EpiEstim	EpiEstim: a package to estimate time varying reproduction numbers from epidemic curves
2013-03-08	nls2	Non-linear regression with brute force
2013-03-07	GESTr	Gene Expression State Transformation
2013-03-07	LDOD	Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models
2013-03-06	IM	Orthogonal Moment Analysis
2013-03-04	MAR1	Multivariate Autoregressive Modeling for Analysis of Community Time-Series Data
2013-03-04	StandardizeText	Standardize Text
2013-03-04	survexp.fr	Relative survival, AER and SMR based on French death rates
2013-03-01	AtmRay	Acoustic Traveltime Calculations for 1-D Atmospheric Models
2013-02-28	heatex	Heat exchange calculations during physical activity
2013-02-28	het.test	White's Test for Heteroskedasticity
2013-02-28	MOJOV	Mojo Variants: Rare Variants analysis
2013-02-28	norm	Analysis of multivariate normal datasets with missing values
2013-02-27	HDMD	Statistical Analysis Tools for High Dimension Molecular Data (HDMD)
2013-02-26	estout	Estimates Output
2013-02-25	iWeigReg	Improved methods for causal inference and missing data problems
2013-02-25	smcUtils	Utility functions for sequential Monte Carlo
2013-02-25	tsbugs	Create time series BUGS models
2013-02-23	conf.design	Construction of factorial designs
2013-02-22	cheb	Discrete Linear Chebyshev Approximation
2013-02-22	epade	Easy Plots
2013-02-22	MEET	MEET: Motif Elements Estimation Toolkit
2013-02-22	nonparaeff	Nonparametric Methods for Measuring Efficiency and Productivity
2013-02-21	Digiroo2	An application programming interface for generating null models of social contacts based on individuals' space use
2013-02-21	DMR	Delete or Merge Regressors for linear model selection
2013-02-21	hash	Full feature implementation of hash/associated arrays/dictionaries
2013-02-21	RSAP	SAP Netweaver RFC connector for R
2013-02-19	designGG	Computational tool for designing genetical genomics experiments
2013-02-17	audiolyzR	audiolyzR: Give your data a listen
2013-02-17	GetR	GetR: Calculate Guttman error trees in R
2013-02-16	HIest	Hybrid index estimation
2013-02-16	multinomRob	Robust Estimation of Overdispersed Multinomial Regression Models
2013-02-15	Iboot	Iboot: iterated bootstrap tests and confidence sets
2013-02-15	smdc	Document Similarity
2013-02-14	survC1	C-statistics for risk prediction models with censored survival data
2013-02-11	gensemble	generalized ensemble methods
2013-02-09	bayess	Bayesian Essentials with R
2013-02-09	Compounding	Computing Continuous Distributions
2013-02-09	modiscloud	R tools for processing Level 2 Cloud Mask products from MODIS
2013-02-07	beadarrayFilter	Bead filtering for Illumina bead arrays
2013-02-07	NestedCohort	Survival Analysis for Cohorts with Missing Covariate Information
2013-02-07	nlsmsn	Fitting nonlinear models with scale mixture of skew-normal distributions
2013-02-07	orddom	Ordinal Dominance Statistics
2013-02-06	stoichcalc	R Functions for Solving Stoichiometric Equations
2013-02-05	exactLoglinTest	Monte Carlo Exact Tests for Log-linear models
2013-02-05	fractalrock	Generate fractal time series with non-normal returns distribution
2013-02-05	gaussquad	Collection of functions for Gaussian quadrature
2013-02-05	pacbpred	PAC-Bayesian Estimation and Prediction in Sparse Additive Models
2013-02-04	OOmisc	Ozgur-Ozlem Miscellaneous
2013-02-04	orthopolynom	Collection of functions for orthogonal and orthonormal polynomials
2013-02-03	pdist	Partitioned Distance Function
2013-02-03	TimeProjection	Time Projections
2013-01-30	mlearning	Machine learning algorithms with unified interface and confusion matrices
2013-01-30	randomGLM	Random General Linear Model Prediction
2013-01-30	YieldCurve	Modelling and estimation of the yield curve
2013-01-29	DivMelt	HRM Diversity Assay Analysis Tool
2013-01-29	EMT	Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data
2013-01-29	SUE	Subsampling method
2013-01-28	RcmdrPlugin.plotByGroup	Rcmdr plots by group using lattice
2013-01-28	svSweave	SciViews GUI API - Sweave functions
2013-01-26	emme2	Read and Write to an EMME/2 databank
2013-01-26	shapefiles	Read and Write ESRI Shapefiles
2013-01-26	UWHAM	Unbinned weighted histogram analysis method (UWHAM)
2013-01-25	FI	Provide functions for forest inventory calculations
2013-01-25	metatest	Fit and test metaregression models
2013-01-25	misc3d	Miscellaneous 3D Plots
2013-01-25	pln	Polytomous logit-normit (graded logistic) model estimation
2013-01-24	dichromat	Color Schemes for Dichromats
2013-01-24	RcmdrPlugin.SLC	SLC Rcmdr Plug-in
2013-01-24	SLC	Slope and level change
2013-01-21	semPLS	Structural Equation Modeling Using Partial Least Squares
2013-01-21	stellaR	stellar evolution tracks and isochrones
2013-01-19	adaptsmoFMRI	Adaptive Smoothing of FMRI Data
2013-01-19	currentSurvival	Estimation of CCI and CLFS Functions
2013-01-19	RcppXts	Interface the xts API via Rcpp
2013-01-18	blockrand	Randomization for block random clinical trials
2013-01-18	CVThresh	Level-Dependent Cross-Validation Thresholding
2013-01-18	edcc	Economic Design of Control Charts
2013-01-18	obsSens	Sensitivity analysis for Observational studies
2013-01-18	partitionMap	Partition Maps
2013-01-17	GWG	Calculation of probabilities for inadequate and excessive gestational weight gain
2013-01-16	Bhat	General likelihood exploration
2013-01-16	rms.gof	Root-mean-square goodness-of-fit test for simple null hypothesis
2013-01-16	spacodiR	Spatial and Phylogenetic Analysis of Community Diversity
2013-01-15	SMPracticals	Practicals for use with Davison (2003) Statistical Models
2013-01-14	ESG	ESG - A package for asset projection
2013-01-14	subtype	Cluster analysis to find molecular subtypes and their assessment
2013-01-13	survivalROC	Time-dependent ROC curve estimation from censored survival data
2013-01-11	gtx	Genetics ToolboX
2013-01-09	PROTOLIDAR	PRocess TOol LIdar DAta in R
2013-01-09	RcmdrPlugin.mosaic	Adds menu items to produce mosaic plots and assoc plots to Rcmdr
2013-01-08	hier.part	Hierarchical Partitioning
2013-01-07	displayHTS	displayHTS
2013-01-05	GWASExactHW	Exact Hardy-Weinburg testing for Genome Wide Association Studies
2013-01-05	Stat2Data	Datasets for Stat2
2013-01-04	proteomicdesign	Optimization of a multi-stage proteomic study
2013-01-03	partialOR	Partial Odds Ratio
2012-12-31	RcmdrPlugin.SM	Rcmdr Sport Management Plug-In
2012-12-30	SPSL	Site Percolation on Square Lattice (SPSL)
2012-12-28	trapezoid	The Trapezoidal Distribution
2012-12-25	truncgof	GoF tests allowing for left truncated data
2012-12-24	MedOr	Median Ordering Statistical R package
2012-12-22	MetaQC	MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis
2012-12-21	imputeMDR	The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data
2012-12-21	NSA	Post-normalization of total copy numbers
2012-12-21	ORMDR	ORMDR
2012-12-21	ReCiPa	Redundancy Control in Pathways databases
2012-12-19	nose	nose Package for R
2012-12-17	dblcens	Compute the NPMLE of distribution from doubly censored data
2012-12-16	WordPools	Classical word pools used in studies of learning and memory
2012-12-15	ConjointChecks	A package to check the cancellation axioms of conjoint measurement
2012-12-15	cosmoFns	Functions for cosmological distances, times, luminosities, etc
2012-12-14	MuFiCokriging	Multi-Fidelity Cokriging models
2012-12-12	nutshell	Data for "R in a Nutshell"
2012-12-12	nutshell.audioscrobbler	Audioscrobbler data for "R in a Nutshell"
2012-12-12	nutshell.bbdb	Baseball Database for "R in a Nutshell"
2012-12-12	OptInterim	Optimal Two and Three Stage Designs for Single-Arm and Two-Arm Randomized Controlled Trials with a Long-Term Binary Endpoint
2012-12-11	IndependenceTests	Nonparametric tests of independence between random vectors
2012-12-10	ftnonpar	Features and Strings for Nonparametric Regression
2012-12-10	SampleSizeMeans	Sample size calculations for normal means
2012-12-08	RDIDQ	It perform Quality check on data
2012-12-08	rpartScore	Classification trees for ordinal responses
2012-12-07	MultinomialCI	Simultaneous confidence intervals for multinomial proportions according to the method by Sison and Glaz
2012-12-05	simba	A Collection of functions for similarity analysis of vegetation data
2012-12-04	glmc	Fitting Generalized Linear Models Subject to Constraints
2012-12-04	source.gist	Read R code from a GitHub Gist
2012-12-03	KMsurv	Data sets from Klein and Moeschberger (1997), Survival Analysis
2012-12-03	muma	Metabolomics Univariate and Multivariate Analysis
2012-12-02	brainwaver	Basic wavelet analysis of multivariate time series with a visualisation and parametrisation using graph theory
2012-12-02	emdist	Earth Mover's Distance
2012-12-02	fracdiff	Fractionally differenced ARIMA aka ARFIMA(p,d,q) models
2012-12-01	ffmanova	Fifty-fifty MANOVA
2012-11-30	gcookbook	Data for "R Graphics Cookbook"
2012-11-28	plmm	Partially Linear Mixed Effects Model
2012-11-27	JASPAR	R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
2012-11-27	TFX	R API to TrueFX(tm)
2012-11-26	maptree	Mapping, pruning, and graphing tree models
2012-11-24	pairedCI	Confidence intervals for the ratio of locations and for the ratio of scales of two paired samples
2012-11-24	stepwise	Stepwise detection of recombination breakpoints
2012-11-20	ChoiceModelR	Choice Modeling in R
2012-11-17	BAEssd	Bayesian Average Error approach to Sample Size Determination
2012-11-15	epibasix	Elementary Epidemiological Functions for Epidemiology and Biostatistics
2012-11-15	PAWL	Implementation of the PAWL algorithm
2012-11-14	bindata	Generation of Artificial Binary Data
2012-11-14	linLIR	linear Likelihood-based Imprecise Regression
2012-11-13	plsdepot	Partial Least Squares (PLS) Data Analysis Methods
2012-11-11	egonet	Tool for ego-centric measures in Social Network Analysis
2012-11-09	STAR	Spike Train Analysis with R
2012-11-07	ResistorArray	electrical properties of resistor networks
2012-11-05	homtest	Homogeneity tests for Regional Frequency Analysis
2012-11-03	mlica2	Independent Component Analysis using Maximum Likelihood
2012-11-03	tableplot	Represents tables as semi-graphic displays
2012-11-02	frmqa	The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance
2012-11-02	IDPmisc	Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch)
2012-11-02	smirnov	Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book
2012-11-01	argosfilter	Argos locations filter
2012-11-01	fpow	Computing the noncentrality parameter of the noncentral F distribution
2012-11-01	SwissAir	Air Quality Data of Switzerland for one year in 30 min Resolution
2012-11-01	xgobi	Interface to the XGobi and XGvis programs for graphical data analysis
2012-10-31	NORMT3	Evaluates complex erf, erfc, Faddeeva, and density of sum of Gaussian and Student's t
2012-10-30	cat	Analysis of categorical-variable datasets with missing values
2012-10-30	cudaBayesregData	Data sets for the examples used in the package "cudaBayesreg"
2012-10-30	degenes	Detection of differentially expressed genes
2012-10-30	ScreenClean	Screen and clean variable selection procedures
2012-10-30	speff2trial	Semiparametric efficient estimation for a two-sample treatment effect
2012-10-29	ACCLMA	ACC & LMA Graph Plotting
2012-10-29	AdaptFit	Adaptive Semiparametic Regression
2012-10-29	allan	Automated Large Linear Analysis Node
2012-10-29	AllPossibleSpellings	Computes all of a word's possible spellings
2012-10-29	andrews	Andrews curves
2012-10-29	APSIMBatch	Analysis the output of Apsim software
2012-10-29	audit	Bounds for Accounting Populations
2012-10-29	batade	HTML reports and so on
2012-10-29	bayespref	Hierarchical Bayesian analysis of ecological count data
2012-10-29	BayHaz	R Functions for Bayesian Hazard Rate Estimation
2012-10-29	betafam	Detecting rare variants for quantitative traits using nuclear families
2012-10-29	betaper	Functions to incorporate taxonomic uncertainty on multivariate analyses of ecological data
2012-10-29	bethel	Bethel's algorithm
2012-10-29	BGSIMD	Block Gibbs Sampler with Incomplete Multinomial Distribution
2012-10-29	bimetallic	Power for SNP analyses using silver standard cases
2012-10-29	bivarRIpower	Sample size calculations for bivariate longitudinal data
2012-10-29	biwt	Functions to compute the biweight mean vector and covariance & correlation matrices
2012-10-29	bootspecdens	Testing equality of spectral densities
2012-10-29	CCA	Canonical correlation analysis
2012-10-29	CCP	Significance Tests for Canonical Correlation Analysis (CCA)
2012-10-29	CDFt	Statistical downscaling through CDF-transform
2012-10-29	CMC	Cronbach-Mesbah Curve
2012-10-29	colorRamps	Builds color tables
2012-10-29	combinat	combinatorics utilities
2012-10-29	CombMSC	Combined Model Selection Criteria
2012-10-29	compoisson	Conway-Maxwell-Poisson Distribution
2012-10-29	concor	Concordance
2012-10-29	cumSeg	Change point detection in genomic sequences
2012-10-29	dbConnect	Provides a graphical user interface to connect with databases that use MySQL
2012-10-29	dinamic	DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors
2012-10-29	discretization	Data preprocessing, discretization for classification
2012-10-29	divagis	Provides tools for quality checks of georeferenced plant species accessions
2012-10-29	dpa	Dynamic Path Approach
2012-10-29	DTDA	Doubly truncated data analysis
2012-10-29	eigeninv	Generates (dense) matrices that have a given set of eigenvalues
2012-10-29	elec	Collection of functions for statistical election audits
2012-10-29	EngrExpt	Data sets from "Introductory Statistics for Engineering Experimentation"
2012-10-29	eyetracking	Eyetracking Helper Functions
2012-10-29	FactMixtAnalysis	Factor Mixture Analysis with covariates
2012-10-29	fgac	Generalized Archimedean Copula
2012-10-29	fit4NM	NONMEM platform
2012-10-29	Flury	Data Sets from Flury, 1997
2012-10-29	forensic	Statistical Methods in Forensic Genetics
2012-10-29	FourScores	FourScores - A game for two players
2012-10-29	frt	Full Randomization Test
2012-10-29	FTICRMS	Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data
2012-10-29	GAD	GAD: Analysis of variance from general principles
2012-10-29	GANPAdata	The GANPA Datasets Package
2012-10-29	GeneF	Package for Generalized F-statistics
2012-10-29	GeneReg	Construct time delay gene regulatory network
2012-10-29	geomapdata	Data for topographic and Geologic Mapping
2012-10-29	gibbs.met	Naive Gibbs Sampling with Metropolis Steps
2012-10-29	globalboosttest	Testing the additional predictive value of high-dimensional data
2012-10-29	gPdtest	Bootstrap goodness-of-fit test for the generalized Pareto distribution
2012-10-29	gwerAM	Controlling the genome-wide type I error rate in association mapping experiments
2012-10-29	HadoopStreaming	Utilities for using R scripts in Hadoop streaming
2012-10-29	HAPim	HapIM
2012-10-29	heatmap.plus	Heatmap with more sensible behavior
2012-10-29	HPbayes	Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling
2012-10-29	igraphtosonia	Convert iGraph graps to SoNIA .son files
2012-10-29	Imap	Interactive Mapping
2012-10-29	IMIS	Increamental Mixture Importance Sampling
2012-10-29	ImpactIV	Identifying Causal Effect for Multi-Component Intervention Using Instrumental Variable Method
2012-10-29	InfDim	Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories
2012-10-29	insideRODE	insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes
2012-10-29	Interpol	Interpolation of amino acid sequences
2012-10-29	introgress	methods for analyzing introgression between divergent lineages
2012-10-29	ISDA.R	interval symbolic data analysis for R
2012-10-29	isopat	Calculation of isotopic pattern for a given molecular formula
2012-10-29	klin	Linear equations with Kronecker structure
2012-10-29	kzft	Kolmogorov-Zurbenko Fourier Transform and Applications
2012-10-29	lmec	Linear Mixed-Effects Models with Censored Responses
2012-10-29	lss	the accelerated failure time model to right censored data based on least-squares principle
2012-10-29	LTR	Perform LTR analysis on microarray data
2012-10-29	MAc	Meta-Analysis with Correlations
2012-10-29	MAclinical	Class prediction based on microarray data and clinical parameters
2012-10-29	mAr	Multivariate AutoRegressive analysis
2012-10-29	MBCluster.Seq	Model-Based Clustering for RNA-seq Data
2012-10-29	Miney	Implementation of the Well-Known Game to Clear Bombs from a Given Field (Matrix)
2012-10-29	minxent	Entropy Optimization Distributions
2012-10-29	MKLE	Maximum kernel likelihood estimation
2012-10-29	mpa	CoWords Method
2012-10-29	mvsf	Shapiro-Francia Multivariate Normality Test
2012-10-29	NetCluster	Clustering for networks
2012-10-29	NetData	Network Data for McFarland's SNA R labs
2012-10-29	NMFN	Non-negative Matrix Factorization
2012-10-29	normwhn.test	Normality and White Noise Testing
2012-10-29	nppbib	Nonparametric Partially-Balanced Incomplete Block Design Analysis
2012-10-29	OligoSpecificitySystem	Oligo Specificity System
2012-10-29	omd	filter the molecular descriptors for QSAR
2012-10-29	oncomodel	Maximum likelihood tree models for oncogenesis
2012-10-29	ORDER2PARENT	Estimate parent distributions with data of several order statistics
2012-10-29	ORIClust	Order-restricted Information Criterion-based Clustering Algorithm
2012-10-29	paleoMAS	Paleoecological Analysis
2012-10-29	parfossil	Parallelized functions for palaeoecological and palaeogeographical analysis
2012-10-29	parviol	Parviol
2012-10-29	PASWR	PROBABILITY and STATISTICS WITH R
2012-10-29	Peaks	Peaks
2012-10-29	pGLS	Generalized Least Square in comparative Phylogenetics
2012-10-29	poistweedie	Poisson-Tweedie exponential family models
2012-10-29	PopGenKit	Useful functions for (batch) file conversion and data resampling in microsatellite datasets
2012-10-29	pps	Functions for PPS sampling
2012-10-29	pragma	Provides a pragma / directive / keyword syntax for R
2012-10-29	PredictiveRegression	Prediction Intervals for Three Basic Statistical Models
2012-10-29	predmixcor	Classification rule based on Bayesian mixture models with feature selection bias corrected
2012-10-29	ProbForecastGOP	Probabilistic weather forecast using the GOP method
2012-10-29	qPCR.CT	qPCR data analysis and plot package
2012-10-29	qtlDesign	Design of QTL experiments
2012-10-29	rdetools	Relevant Dimension Estimation (RDE) in Feature Spaces
2012-10-29	reams	Resampling-Based Adaptive Model Selection
2012-10-29	Records	Record Values and Record Times
2012-10-29	REQS	R/EQS Interface
2012-10-29	RHT	Regularized Hotelling's T-square Test for Pathway (Gene Set) Analysis
2012-10-29	ROCwoGS	Non-parametric estimation of ROC curves without Gold Standard Test
2012-10-29	RODM	R interface to Oracle Data Mining
2012-10-29	RPyGeo	ArcGIS Geoprocessing in R via Python
2012-10-29	rSymPy	R interface to SymPy computer algebra system
2012-10-29	sddpack	Semidiscrete Decomposition
2012-10-29	seqCBS	CN Profiling using Sequencing and CBS
2012-10-29	seqRFLP	Simulation and visualization of restriction enzyme cutting pattern from DNA sequences
2012-10-29	session	Functions for interacting with, saving and restoring R sessions
2012-10-29	skewt	The Skewed Student-t Distribution
2012-10-29	smco	A simple Monte Carlo optimizer using adaptive coordinate sampling
2012-10-29	SMVar	Structural Model for variances
2012-10-29	SNPmaxsel	Maximally selected statistics for SNP data
2012-10-29	spi	Compute SPI index
2012-10-29	sporm	Semiparametric proportional odds rate model
2012-10-29	Stem	Spatio-temporal models in R
2012-10-29	symbols	Symbol plots
2012-10-29	TANOVA	Time Course Analysis of Variance for Microarray
2012-10-29	TERAplusB	Test for A+B Traditional Escalation Rule
2012-10-29	tfer	Forensic Glass Transfer Probabilities
2012-10-29	titan	Titration analysis for mass spectrometry data
2012-10-29	trifield	Some basic facilities for ternary fields and plots
2012-10-29	Tsphere	Transposable Sphering for Large-Scale Inference with Correlated Data
2012-10-29	unbalhaar	Function estimation via Unbalanced Haar wavelets
2012-10-29	UScensus2000cdp	US Census 2000 Designated Places Shapefiles and Additional Demographic Data
2012-10-29	UScensus2000tract	US Census 2000 Tract Level Shapefiles and Additional Demographic Data
2012-10-29	vegetarian	Jost Diversity Measures for Community Data
2012-10-29	VIF	VIF Regression: A Fast Regression Algorithm For Large Data
2012-10-29	violinmplot	Combination of violin plot with mean and standard deviation
2012-10-29	walkscoreAPI	Walk Score and Transit Score API
2012-10-29	wikibooks	Functions and datasets of the german WikiBook "GNU R"
2012-10-29	WilcoxCV	Wilcoxon-based variable selection in cross-validation
2012-10-29	write.snns	Function for exporting data to SNNS pattern files
2012-10-29	wSVM	Weighted SVM with boosting algorithm for improving accuracy
2012-10-29	yacca	Yet Another Canonical Correlation Analysis Package
2012-10-27	nlmeODE	Non-linear mixed-effects modelling in nlme using differential equations
2012-10-24	CARE1	Statistical package for population size estimation in capture-recapture models
2012-10-24	dpglasso	Primal Graphical Lasso
2012-10-23	pheno	Auxiliary functions for phenological data analysis
2012-10-23	RGtk2Extras	Data frame editor and dialog making wrapper for RGtk2
2012-10-22	detrendeR	Start the detrendeR Graphical User Interface (GUI)
2012-10-22	landsat	Radiometric and topographic correction of satellite imagery
2012-10-20	MBI	(M)ultiple-site (B)iodiversity (I)ndices Calculator
2012-10-19	TwoCop	Nonparametric test of equality between two copulas
2012-10-17	bmk	MCMC diagnostics package
2012-10-17	linprog	Linear Programming / Optimization
2012-10-16	PhaseType	Inference for Phase-type Distributions
2012-10-15	modeest	Mode Estimation
2012-10-15	Ridit	Ridit Analysis (An extension of the Kruskal-Wallis Test.)
2012-10-11	powerpkg	Power analyses for the affected sib pair and the TDT design
2012-10-10	PoissonSeq	Significance analysis of sequencing data based on a Poisson log linear model
2012-10-05	r2stl	r2stl, R package for visualizing data using a 3D printer
2012-10-05	Rivivc	In vitro in vivo correlation linear level A
2012-10-04	FRCC	Fast Regularized Canonical Correlation Analysis
2012-10-04	rrBlupMethod6	Re-parametrization of RR-BLUP to allow for a fixed residual variance
2012-10-03	rworldxtra	Country boundaries at high resolution
2012-10-01	biasbetareg	Bias correction of the parameter estimates of the beta regression model
2012-10-01	gbRd	Utilities for processing Rd objects and files
2012-10-01	loop	loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology
2012-09-29	astroFns	Astronomy: time and position functions, misc. utilities
2012-09-26	ccChooser	Developing a core collections
2012-09-26	risksetROC	Riskset ROC curve estimation from censored survival data
2012-09-26	smcure	Fit Semiparametric Mixture Cure Models
2012-09-25	emoa	Evolutionary Multiobjective Optimization Algorithms
2012-09-20	binomialcftp	Generates binomial random numbers via the coupling from the past algorithm
2012-09-19	namespace	Provide namespace managment functions not (yet) present in base R
2012-09-19	nparLD	Nonparametric Analysis of Longitudinal Data in Factorial Experiments
2012-09-17	Giza	Constructing panels of population pyramid plots based on lattice
2012-09-15	abcdeFBA	ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package
2012-09-15	matrixcalc	Collection of functions for matrix calculations
2012-09-14	WCQ	Detection of QTL effects in a small mapping population
2012-09-13	JavaGD	Java Graphics Device
2012-09-13	spcov	Sparse Estimation of a Covariance Matrix
2012-09-11	BayesNI	BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints
2012-09-10	hmeasure	The H-measure and other scalar classification performance metrics
2012-09-10	paran	Horn's Test of Principal Components/Factors
2012-09-06	FMStable	Finite Moment Stable Distributions
2012-09-06	NISTnls	Nonlinear least squares examples from NIST
2012-09-05	hbsae	Hierarchical Bayesian Small Area Estimation
2012-09-04	ipdmeta	Tools for subgroup analyses with multiple trial data using aggregate statistics
2012-09-04	mlPhaser	Multi-Locus Haplotype Phasing
2012-09-04	survAUC	Estimators of prediction accuracy for time-to-event data
2012-09-03	PIPS	Predicted Interval Plots
2012-09-02	pso	Particle Swarm Optimization
2012-09-01	twoStageGwasPower	Compute thresholds and power for two-stage gwas
2012-08-31	clusteval	Evaluation of Clustering Algorithms
2012-08-31	NetComp	Network Generation and Comparison
2012-08-30	fmt	Variance estimation of FMT method (Fully Moderated t-statistic)
2012-08-30	rbenchmark	Benchmarking routine for R
2012-08-29	MetabolAnalyze	Probabilistic latent variable models for metabolomic data
2012-08-28	playwith	A GUI for interactive plots using GTK+
2012-08-24	regtest	Regression testing
2012-08-24	rindex	Indexing for R
2012-08-24	SearchTrees	Spatial Search Trees
2012-08-23	gaussDiff	Difference measures for multivariate Gaussian probability density functions
2012-08-23	muStat	Prentice Rank Sum Test and McNemar Test
2012-08-23	Simpsons	Detecting Simpson's Paradox
2012-08-23	smoothmest	Smoothed M-estimators for 1-dimensional location
2012-08-22	Rlab	Functions and Datasets Required for ST370 class
2012-08-22	sitools	Format a number to a string with SI prefix
2012-08-21	BigTSP	Top Scoring Pair based methods for classification
2012-08-21	flashClust	Implementation of optimal hierarchical clustering
2012-08-19	cxxfunplus	extend cxxfunction by saving the dynamic shared objects
2012-08-19	MATTOOLS	Modern Calibration Functions for the Modern Analog Technique (MAT)
2012-08-19	RPCLR	RPCLR (Random-Penalized Conditional Logistic Regression)
2012-08-17	PresenceAbsence	Presence-Absence Model Evaluation
2012-08-17	SAScii	Import ASCII files directly into R using only a SAS input script
2012-08-16	capwire	Estimates population size from non-invasive sampling
2012-08-14	aspace	A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns
2012-08-14	rHpcc	Interface between HPCC and R
2012-08-13	kerdiest	Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions
2012-08-13	SQN	subset quantile normalization
2012-08-13	TauP.R	Earthquake Traveltime Calculations for 1-D Earth Models
2012-08-11	boostSeq	Optimized GWAS cohort subset selection for resequencing studies
2012-08-11	PLIS	Multiplicity control using Pooled LIS statistic
2012-08-10	IC2	Inequality and Concentration Indices and Curves
2012-08-10	obliqueRF	Oblique Random Forests from Recursive Linear Model Splits
2012-08-09	bvenn	A Simple alternative to proportional Venn diagrams
2012-08-09	BVS	Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies
2012-08-09	dlmap	Detection Localization Mapping for QTL
2012-08-09	FormalSeries	Elementary arithemtic in formal series rings
2012-08-09	modelfree	Model-free estimation of a psychometric function
2012-08-09	p2distance	Welfare's Synthetic Indicator
2012-08-08	fugeR	FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic
2012-08-07	semGOF	Goodness-of-fit indexes for structural equation models
2012-08-06	notifyR	Send push notifications to your smartphone via pushover.net (ACCOUNT REQUIRED!)
2012-08-05	deamer	Deconvolution density estimation with adaptive methods for a variable prone to measurement error
2012-08-05	proj4	A simple interface to the PROJ.4 cartographic projections library
2012-08-04	R2PPT	Simple R Interface to Microsoft PowerPoint using rcom or RDCOMClient
2012-08-03	crblocks	Categorical Randomized Block Data Analysis
2012-08-02	coexist	Species coexistence modeling and analysis
2012-08-02	crn	Downloads and Builds datasets for Climate Reference Network
2012-08-01	Runiversal	Runiversal - Package for converting R objects to Java variables and XML
2012-07-31	rtape	Manage and manipulate large collections of R objects stored as tape-like files
2012-07-30	HyPhy	Macroevolutionary phylogentic analysis of species trees and gene trees
2012-07-30	rJython	R interface to Python via Jython
2012-07-28	BaylorEdPsych	R Package for Baylor University Educational Psychology Quantitative Courses
2012-07-28	gogarch	Generalized Orthogonal GARCH (GO-GARCH) models
2012-07-26	mbmdr	Model Based Multifactor Dimensionality Reduction
2012-07-25	txtplot	Text based plots
2012-07-23	c3net	Infering large-scale gene networks with C3NET
2012-07-23	drawExpression	Visualising R syntax through graphics
2012-07-23	FindAllRoots	Find all root(s) of the equation and Find root(s) of the equation by dichotomy
2012-07-23	FunCluster	Functional Profiling of Microarray Expression Data
2012-07-23	geneListPie	Profiling a gene list into GOslim or KEGG function pie
2012-07-23	GExMap	A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data
2012-07-23	mcclust	Process an MCMC Sample of Clusterings
2012-07-23	ODB	Open Document Databases (.odb) management
2012-07-23	parmigene	Parallel Mutual Information estimation for Gene Network reconstruction
2012-07-23	schoolmath	Functions and datasets for math used in school
2012-07-23	spa	Implements The Sequential Predictions Algorithm
2012-07-20	FRACTION	Numeric number into fraction
2012-07-20	obliclus	Cluster-based factor rotation
2012-07-17	bspmma	bspmma: Bayesian Semiparametric Models for Meta-Analysis
2012-07-16	irr	Various Coefficients of Interrater Reliability and Agreement
2012-07-13	knnGarden	Multi-distance based k-Nearest Neighbors
2012-07-12	UScensus2010	US Census 2010 Suite of R Packages
2012-07-11	DeducerSurvival	Add Survival Dialogue to Deducer
2012-07-11	HW.pval	Testing Hardy-Weinberg Equilibrium for Multiallelic Genes
2012-07-11	hypothesestest	Confidence Intervals and Tests of Statistical Hypotheses
2012-07-10	mlbench	Machine Learning Benchmark Problems
2012-07-10	mvtmeta	Multivariate meta-analysis
2012-07-09	extraBinomial	Extra-binomial approach for pooled sequencing data
2012-07-09	SECP	Statistical Estimation of Cluster Parameters (SECP)
2012-07-07	CPE	Concordance Probability Estimates in Survival Analysis
2012-07-06	NLRoot	searching for the root of equation
2012-07-06	WMDB	Discriminant Analysis Methods by Weight Mahalanobis Distance and bayes
2012-07-05	ncg	Computes the noncentral gamma function
2012-07-04	p3state.msm	Analyzing survival data
2012-07-03	myepisodes	MyEpisodes RSS/API functions
2012-07-02	CR	Power Calculation for Weighted Log-Rank Tests in Cure Rate Models
2012-07-02	rCUR	CUR decomposition package
2012-06-28	elasticnet	Elastic-Net for Sparse Estimation and Sparse PCA
2012-06-28	RAD	Fit RAD models to biological data
2012-06-25	gclus	Clustering Graphics
2012-06-21	ezglm	selects significant non-additive interaction between two variables using fast GLM implementation
2012-06-21	psy	Various procedures used in psychometry
2012-06-20	RVideoPoker	Play Video Poker with R
2012-06-19	AMAP.Seq	Compare Gene Expressions from 2-Treatment RNA-Seq Experiments
2012-06-18	tourrGui	A Tour GUI using gWidgets
2012-06-17	crossmatch	The Cross-match Test
2012-06-15	bisectr	Tools to find bad commits with git bisect
2012-06-14	dummies	Create dummy/indicator variables flexibly and efficiently
2012-06-11	caribou	Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry
2012-06-11	extrafontdb	Package for holding the database for the extrafont package
2012-06-09	rrlda	Robust Regularized Linear Discriminant Analysis
2012-06-08	CHCN	Canadian Historical Climate Network
2012-06-07	R330	An R package for Stats 330
2012-06-05	bios2mds	From BIOlogical Sequences to MultiDimensional Scaling
2012-06-05	RIFS	Random Iterated Function System (RIFS)
2012-06-04	MorseGen	Simple raw data generator based on user-specified summary statistics
2012-06-04	Voss	Generic Voss algorithm (random sequential additions)
2012-06-03	SimpleTable	Bayesian Inference and Sensitivity Analysis for Causal Effects from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured Confounding
2012-06-01	hiPOD	hierarchical Pooled Optimal Design
2012-06-01	howmany	A lower bound for the number of correct rejections
2012-06-01	relaxo	Relaxed Lasso
2012-05-31	OIdata	Data sets and supplements (OpenIntro)
2012-05-30	foodweb	visualisation and analysis of food web networks
2012-05-28	plus	Penalized Linear Unbiased Selection
2012-05-26	OpenCL	Interface allowing R to use OpenCL
2012-05-25	fgof	Fast Goodness-of-fit Test
2012-05-24	WeightedPortTest	Weighted Portmanteau Tests for Time Series Goodness-of-fit
2012-05-19	irtrees	Estimation of Tree-Based Item Response Models
2012-05-18	makeProject	Creates an empty package framework for the LCFD format
2012-05-17	msgps	Degrees of freedom of elastic net, adaptive lasso and generalized elastic net
2012-05-17	QUIC	Regularized sparse inverse covariance matrix estimation
2012-05-17	simSummary	Simulation summary
2012-05-16	M3	Reading M3 files
2012-05-16	primer	Functions and data for A Primer of Ecology with R
2012-05-15	ri	ri: R package for performing randomization-based inference for experiments
2012-05-14	cumplyr	Extends ddply to allow calculation of cumulative quantities
2012-05-14	cvTools	Cross-validation tools for regression models
2012-05-13	SortableHTMLTables	Turns a data frame into an HTML file containing a sortable table
2012-05-11	dafs	Data analysis for forensic scientists
2012-05-08	iCluster	Integrative clustering of multiple genomic data types
2012-05-07	CityPlot	Visualization of structure and contents of a database
2012-05-06	clime	Constrained L1-minimization for Inverse (covariance) Matrix Estimation
2012-05-05	discreteMTP	Multiple testing procedures for discrete test statistics
2012-05-05	tensor	Tensor product of arrays
2012-05-02	lassoshooting	L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting
2012-05-01	condmixt	Conditional Density Estimation with Neural Network Conditional Mixtures
2012-04-25	superdiag	R Code for Testing Markov Chain Nonconvergence
2012-04-21	labeledLoop	Labeled Loop
2012-04-16	GeneCycle	Identification of Periodically Expressed Genes
2012-04-15	mseapca	Metabolite set enrichment analysis for factor loading in principal component analysis
2012-04-13	LIHNPSD	Poisson Subordinated Distribution
2012-04-12	mvnormtest	Normality test for multivariate variables
2012-04-12	reweight	Adjustment of Survey Respondent Weights
2012-04-12	sROC	Nonparametric Smooth ROC Curves for Continuous Data
2012-04-11	mmds	Mixture Model Distance Sampling (mmds)
2012-04-11	waffect	A package to simulate constrained phenotypes under a disease model H1
2012-04-10	aod	Analysis of Overdispersed Data
2012-04-10	BayesDA	Functions and Datasets for the book "Bayesian Data Analysis"
2012-04-10	elec.strat	Functions for election audits using stratified random samples
2012-04-06	race	Racing methods for the selection of the best
2012-04-04	corpora	Statistics and data sets for corpus frequency data
2012-04-03	FinAsym	Classifies implicit trading activity from market quotes and computes the probability of informed trading
2012-04-02	apsrtable	apsrtable model-output formatter for social science
2012-03-31	RcmdrPlugin.epack	Rcmdr plugin for time series
2012-03-30	fossil	Palaeoecological and Palaeogeographical Analysis Tools
2012-03-28	WWGbook	Functions and datasets for WWGbook
2012-03-26	FBN	FISH Based Normalization and Copy Number inference of SNP microarray data
2012-03-26	mlgt	Multi-Locus Geno-Typing
2012-03-24	MHadaptive	General Markov Chain Monte Carlo for Bayesian Inference using adaptive Metropolis-Hastings sampling
2012-03-23	filehashSQLite	Simple key-value database using SQLite
2012-03-23	SPA3G	SPA3G: R package for the method of Li and Cui (2012)
2012-03-21	lle	Locally linear embedding
2012-03-21	mvtsplot	Multivariate Time Series Plot
2012-03-21	represent	Determine the representativity of two multidimensional data sets
2012-03-20	QuantPsyc	Quantitative Psychology Tools
2012-03-19	AUCRF	Variable Selection with Random Forest and the Area Under the Curve
2012-03-19	mgpd	mgpd: Functions for multivariate generalized Pareto distribution (MGPD of Type II)
2012-03-19	nnls	The Lawson-Hanson algorithm for non-negative least squares (NNLS)
2012-03-18	PSAgraphics	Propensity Score Analysis Graphics
2012-03-17	DeducerPlugInExample	Deducer Plug-in Example
2012-03-17	DeducerPlugInScaling	Reliability and factor analysis plugin
2012-03-16	bmd	Benchmark dose analysis for dose-response data
2012-03-16	R2wd	Write MS-Word documents from R
2012-03-15	VarSwapPrice	Pricing a variance swap on an equity index
2012-03-14	PKgraph	Model diagnostics for population pharmacokinetic models
2012-03-12	zipcode	U.S. ZIP Code database for geocoding
2012-03-09	qLearn	Estimation and inference for Q-learning
2012-03-08	eqtl	Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis
2012-03-05	soobench	Single Objective Optimization Benchmark Functions
2012-03-04	AmericanCallOpt	This package includes pricing function for selected American call options with underlying assets that generate payouts
2012-03-01	CRM	Continual Reassessment Method (CRM) for Phase I Clinical Trials
2012-03-01	rBeta2009	The Beta Random Number and Dirichlet Random Vector Generating Functions
2012-02-29	benchden	28 benchmark densities from Berlinet/Devroye (1994)
2012-02-27	superpc	Supervised principal components
2012-02-21	RMallow	Fit Multi-Modal Mallows' Models to ranking data
2012-02-20	barcode	Barcode distribution plots
2012-02-20	ops	Optimal Power Space Transformation
2012-02-19	perturb	Tools for evaluating collinearity
2012-02-15	gamlss.nl	Fitting non linear parametric GAMLSS models
2012-02-11	idbg	R debugger
2012-02-10	pairheatmap	A tool for comparing heatmaps
2012-02-06	futile.paradigm	A framework for working in a functional programming paradigm in R
2012-01-30	Rwinsteps	Running Winsteps in R
2012-01-30	semdiag	Structural equation modeling diagnostics
2012-01-28	geotools	Geo tools
2012-01-28	tlmec	Linear Student-t Mixed-Effects Models with Censored Data
2012-01-27	MIPHENO	Mutant Identification through Probabilistic High throughput Enabled NOrmalization
2012-01-22	SEER2R	reading and writing SEER*STAT data files
2012-01-20	apple	Approximate Path for Penalized Likelihood Estimators
2012-01-18	cytoDiv	Cytometric diversity indices
2012-01-17	ifa	Independent Factor Analysis
2012-01-16	DBGSA	methods of distance-based gene set functional enrichment analysis
2012-01-15	GillespieSSA	Gillespie's Stochastic Simulation Algorithm (SSA)
2012-01-15	PKPDmodels	Pharmacokinetic/pharmacodynamic models
2012-01-13	eiPack	eiPack: Ecological Inference and Higher-Dimension Data Management
2012-01-13	lga	Tools for linear grouping analysis (LGA)
2012-01-13	randaes	Random number generator based on AES cipher
2012-01-12	lisp	List-processing à la SRFI-1
2012-01-07	events	Store and manipulate event data
2012-01-05	MImix	Mixture summary method for multiple imputation
2012-01-04	mcbiopi	Matrix Computation Based Identification Of Prime Implicants
2012-01-03	GOGANPA	GO-Functional-Network-based Gene-Set-Analysis
2012-01-03	rpsychi	Statistics for psychiatric research
2011-12-30	cin	Causal Inference for Neuroscience
2011-12-30	wasim	Visualisation and analysis of output files of the hydrological model WASIM
2011-12-28	ADGofTest	Anderson-Darling GoF test
2011-12-28	biglars	Scalable Least-Angle Regression and Lasso
2011-12-23	ktspair	k-Top Scoring Pairs for Microarray Classification
2011-12-20	nFactors	Parallel Analysis and Non Graphical Solutions to the Cattell Scree Test
2011-12-13	objectProperties	A factory of self-describing properties
2011-12-11	EMC	Evolutionary Monte Carlo (EMC) algorithm
2011-12-11	SMC	Sequential Monte Carlo (SMC) Algorithm
2011-12-02	supclust	Supervised Clustering of Predictor Variables such as Genes
2011-12-01	OrdMonReg	Compute least squares estimates of one bounded or two ordered isotonic regression curves
2011-11-30	plugdensity	Plug-in Kernel Density Estimation
2011-11-25	mpm	Multivariate Projection Methods
2011-11-22	Survgini	The Gini concentration test for survival data
2011-11-19	ProfileLikelihood	Profile Likelihood for a Parameter in Commonly Used Statistical Models
2011-11-16	SyNet	Inference and Analysis of Sympatry Networks
2011-11-07	RArcInfo	Functions to import data from Arc/Info V7.x binary coverages
2011-11-04	NPsimex	Nonparametric Smoothing for contaminated data using Simulation-Extrapolation
2011-11-03	mail	Sending Email Notifications from R
2011-11-02	EL	Two-sample Empirical Likelihood
2011-11-02	rationalfun	Manipulation of Rational Functions
2011-10-28	objectSignals	objectSignals
2011-10-26	emma	Evolutionary model-based multiresponse approach
2011-10-23	AnnotLists	AnnotLists: A tool to annotate multiple lists from a specific annotation file
2011-10-20	MultEq	Multiple Equivalence Tests and Simultaneous Confidence Intervals
2011-09-29	ascii	Export R objects to several markup languages
2011-09-07	ISOweek	Week of the year and weekday according to ISO 8601
2011-08-28	viopoints	1-D Scatter Plots with Jitter Using Kernel Density Estimates
2011-08-18	ieeeround	Functions to set and get the IEEE rounding mode
2011-08-14	RcmdrPlugin.doex	Rcmdr plugin for Stat 4309 course
2011-08-12	fun	Use R for Fun
2011-08-10	venneuler	Venn and Euler Diagrams
2011-08-08	mxkssd	Efficient mixed-level k-circulant supersaturated designs
2011-08-08	REEMtree	Regression Trees with Random Effects for Longitudinal (Panel) Data
2011-08-05	mkssd	Efficient multi-level k-circulant supersaturated designs
2011-07-27	fwdmsa	Forward search for Mokken scale analysis
2011-07-23	CLSOCP	A smoothing Newton method SOCP solver
2011-07-23	minimax	Minimax distribution family
2011-07-19	pixmap	Bitmap Images (“Pixel Maps”)
2011-07-18	B2Z	Bayesian Two-Zone Model
2011-07-06	limitplot	Jitter/CI Plot with Ordered Points Below the Limit of Detection
2011-06-29	enrichvs	Enrichment assessment of virtual screening approaches
2011-06-15	longmemo	Statistics for Long-Memory Processes (Jan Beran) – Data and Functions
2011-06-15	MetaPCA	MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
2011-05-31	reshapeGUI	A GUI for the reshape2 and plyr packages
2011-05-29	GANPA	Gene Association Network-based Pathway Analysis
2011-05-26	gtcorr	Calculate efficiencies of group testing algorithms with correlated responses
2011-05-18	Kendall	Kendall rank correlation and Mann-Kendall trend test
2011-05-18	pear	Package for Periodic Autoregression Analysis
2011-04-26	MAPLES	Smoothed age profile estimation
2011-04-24	SPECIES	Statistical package for species richness estimation
2011-04-15	lmmlasso	Linear mixed-effects models with Lasso
2011-04-13	brew	Templating Framework for Report Generation
2011-04-06	lcda	Latent Class Discriminant Analysis
2011-03-21	metacor	Meta-analysis of correlation coefficients
2011-03-09	compeir	Event-specific incidence rates for competing risks data
2011-02-24	fpca	Restricted MLE for Functional Principal Components Analysis
2011-02-22	MUCflights	Munich Franz-Josef-Strauss Airport Pattern Analysis
2011-02-21	beadarrayMSV	Analysis of Illumina BeadArray SNP data including MSV markers
2011-02-18	Meth27QC	Meth27QC: sample quality analysis, and sample control analysis
2011-01-29	cmaes	Covariance Matrix Adapting Evolutionary Strategy
2011-01-24	outliers	Tests for outliers
2011-01-23	multxpert	Common Multiple Testing Procedures and Gatekeeping Procedures
2011-01-20	darts	Statistical Tools to Analyze Your Darts Game
2011-01-03	factualR	thin wrapper for the Factual.com server API
2011-01-03	neariso	Near-Isotonic Regression
2011-01-03	reliaR	Package for some probability distributions
2010-12-16	orQA	Order Restricted Assessment Of Microarray Titration Experiments
2010-12-06	dcv	Conventional Cross-validation statistics for climate-growth model
2010-10-27	inference	Functions to extract inferential values of a fitted model object
2010-10-20	fANCOVA	Nonparametric Analysis of Covariance
2010-10-04	rocc	ROC based classification
2010-10-01	genepi	Genetic Epidemiology Design and Inference
2010-09-29	factorQR	Bayesian quantile regression factor models
2010-09-17	laercio	Duncan test, Tukey test and Scott-Knott test
2010-09-02	SMCP	Smoothed minimax concave penalization (SMCP) method for genome-wide association studies
2010-08-08	psychometric	Applied Psychometric Theory
2010-07-29	perm	Exact or Asymptotic permutation tests
2010-07-07	mlmmm	ML estimation under multivariate linear mixed models with missing values
2010-06-25	RNCBIEUtilsLibs	EUtils libraries for use in the R environment
2010-06-20	ttutils	Utility functions
2010-05-23	SEL	Semiparametric elicitation
2010-05-07	cgh	Microarray CGH analysis using the Smith-Waterman algorithm
2010-05-07	imprProbEst	Minimum distance estimation in an imprecise probability model
2010-05-01	ProDenICA	Product Density Estimation for ICA using tilted Gaussian density estimates
2010-04-14	identity	Jacquard Condensed Coefficients of Identity
2010-04-14	space	Sparse PArtial Correlation Estimation
2010-04-13	nws	R functions for NetWorkSpaces and Sleigh
2010-04-12	tpr	Temporal Process Regression
2010-04-05	AIM	AIM: adaptive index model
2010-04-02	endogMNP	R Package for Fitting Multinomial Probit Models with Endogenous Selection
2010-03-16	haarfisz	Software to perform Haar Fisz transforms
2010-02-16	ic50	Standardized high-throughput evaluation of cell-based compound screens
2010-02-07	stam	Spatio-Temporal Analysis and Modelling
2010-02-03	scrapeR	Tools for Scraping Data from HTML and XML Documents
2010-02-01	dynamicGraph	dynamicGraph
2010-01-28	fisheyeR	Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R
2010-01-10	HMM	HMM - Hidden Markov Models
2010-01-04	GSA	Gene set analysis
2009-12-17	SampleSizeProportions	Calculating sample size requirements when estimating the difference between two binomial proportions
2009-12-03	datamap	A system for mapping foreign objects to R variables and environments
2009-11-25	LogitNet	Infer network based on binary arrays using regularized logistic regression
2009-10-27	rela	Item Analysis Package with Standard Errors
2009-10-16	adaptTest	Adaptive two-stage tests
2009-10-12	grouped	Regression Analysis of Grouped and Coarse Data
2009-10-11	packClassic	Toy example of Pack Classic
2009-09-28	EQL	Extended-Quasi-Likelihood-Function (EQL)
2009-09-23	HyperbolicDist	The hyperbolic distribution
2009-08-30	km.ci	Confidence intervals for the Kaplan-Meier estimator
2009-08-08	crantastic	Various R tools for http://crantastic.org/
2009-06-29	PearsonICA	Independent component analysis using score functions from the Pearson system
2009-06-14	svcm	2d and 3d Space-Varying Coefficient Models
2009-06-08	HybridMC	Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques
2009-06-04	bootStepAIC	Bootstrap stepAIC
2009-05-05	luca	Likelihood inference from case-control data Under Covariate Assumptions (LUCA)
2009-05-05	SEMModComp	Model Comparisons for SEM
2009-04-28	mcsm	Functions for Monte Carlo Methods with R
2009-04-15	uniCox	Univarate shrinkage prediction in the Cox model
2009-03-01	clusterRepro	Reproducibility of gene expression clusters
2009-02-25	sac	Semiparametric Analysis of Changepoint
2009-02-24	spe	Stochastic Proximity Embedding
2009-02-01	CreditMetrics	Functions for calculating the CreditMetrics risk model
2009-02-01	Reliability	Functions for estimating parameters in software reliability models
2009-01-30	ETC	Equivalence to control
2008-11-08	foba	greedy variable selection
2008-10-28	kzs	Kolmogorov-Zurbenko Spatial Smoothing and Applications
2008-10-02	expert	Modeling without data using expert opinion
2008-09-28	goalprog	Weighted and lexicographical goal programming and optimization
2008-09-08	pack	Convert values to/from raw vectors
2008-08-13	RM2	Revenue Management and Pricing Package
2008-06-23	SASPECT	Significant AnalysiS of PEptide CounTs
2008-06-09	LDtests	Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium
2008-05-02	simpleboot	Simple Bootstrap Routines
2008-04-29	poilog	Poisson lognormal and bivariate Poisson lognormal distribution
2007-10-16	fuzzyFDR	Exact calculation of fuzzy decision rules for multiple testing
2006-08-19	powell	Powell's UObyQA algorithm
2006-05-24	allelic	A fast, unbiased and exact allelic exact test
2006-03-30	BayesValidate	BayesValidate Package
2006-03-15	coxrobust	Robust Estimation in Cox Model
2005-10-29	vioplot	Violin plot