biogrowth: Modelling of Microbial Growth

Modelling of microbial growth under isothermal and dynamic conditions. Includes functions for model fitting and making prediction under isothermal and dynamic conditions using methods (algorithms & models) common in predictive microbiology (See Perez-Rodriguez and Valero (2012, ISBN:978-1-4614-5519-6)).

Version: 0.1.2
Depends: R (≥ 2.10)
Imports: deSolve (≥ 1.28), tibble (≥ 3.0.3), dplyr (≥ 0.8.5), FME (≥ 1.3.6), MASS (≥ 7.3), rlang (≥ 0.4.7), purrr (≥ 0.3.4), ggplot2 (≥ 3.3.2), cowplot (≥ 1.0.0), lamW (≥ 1.3.0), tidyr (≥ 1.0.2)
Suggests: knitr, rmarkdown, tidyverse (≥ 1.3.0)
Published: 2020-11-26
Author: Alberto Garre ORCID iD [aut, cre], Jeroen Koomen [aut], Heidy den Besten [aut], Marcel Zwietering [aut]
Maintainer: Alberto Garre <garre.alberto at gmail.com>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: biogrowth results

Downloads:

Reference manual: biogrowth.pdf
Vignettes: Publication ready figures with biogrowth
biogrowth_basics
Package source: biogrowth_0.1.2.tar.gz
Windows binaries: r-devel: biogrowth_0.1.2.zip, r-release: biogrowth_0.1.2.zip, r-oldrel: biogrowth_0.1.2.zip
macOS binaries: r-release: biogrowth_0.1.2.tgz, r-oldrel: biogrowth_0.1.2.tgz
Old sources: biogrowth archive

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