boral: Bayesian Ordination and Regression AnaLysis

Bayesian approaches for analyzing multivariate data in ecology. Estimation is performed using Markov Chain Monte Carlo (MCMC) methods via Three. JAGS types of models may be fitted: 1) With explanatory variables only, boral fits independent column Generalized Linear Models (GLMs) to each column of the response matrix; 2) With latent variables only, boral fits a purely latent variable model for model-based unconstrained ordination; 3) With explanatory and latent variables, boral fits correlated column GLMs with latent variables to account for any residual correlation between the columns of the response matrix.

Version: 1.5
Depends: coda
Imports: R2jags, mvtnorm, fishMod, MASS, stats, graphics, grDevices, abind
Suggests: mvabund (≥ 3.8.4), corrplot
Published: 2018-01-08
Author: Francis K.C. Hui
Maintainer: Francis Hui <fhui28 at>
License: GPL-2
NeedsCompilation: no
Citation: boral citation info
Materials: NEWS
CRAN checks: boral results


Reference manual: boral.pdf
Package source: boral_1.5.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: boral_1.5.tgz
OS X Mavericks binaries: r-oldrel: boral_1.5.tgz
Old sources: boral archive


Please use the canonical form to link to this page.