canprot: Chemical Composition of Differential Protein Expression

Datasets are collected here for differentially (up- and down-) expressed proteins identified in proteomic studies of cancer and in cell culture experiments. Tables of amino acid compositions of proteins are used for calculations of chemical composition, projected into selected basis species. Plotting functions are used to visualize the compositional differences and thermodynamic potentials for proteomic transformations.

Version: 0.1.1
Depends: R (≥ 3.1.0)
Imports: CHNOSZ (≥ 1.1.0), xtable
Suggests: knitr, rmarkdown, KernSmooth
Published: 2018-01-18
Author: Jeffrey Dick
Maintainer: Jeffrey Dick <j3ffdick at>
License: GPL-3
NeedsCompilation: no
Citation: canprot citation info
Materials: README NEWS
CRAN checks: canprot results


Reference manual: canprot.pdf
Vignettes: Basis Species Comparison
Data: Colorectal Cancer
Data: Hyperosmotic Stress
Data: Hypoxia or 3D Culture
Data: Pancreatic Cancer
Potential Diagrams
Package source: canprot_0.1.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: canprot_0.1.1.tgz
OS X Mavericks binaries: r-oldrel: canprot_0.1.0.tgz
Old sources: canprot archive


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