deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference

Infer progression of circadian rhythms in transcriptome data in which samples are not labeled with time of day and coverage of the circadian cycle may be incomplete. See Shilts et al. (2018) <doi:10.7717/peerj.4327>.

Version: 1.0.2
Depends: R (≥ 3.4)
Imports: doRNG (≥ 1.6.6), foreach (≥ 1.4.3), ggplot2 (≥ 2.2.1), rlang (≥ 0.4.11), scales (≥ 0.5.0), statmod (≥ 1.4.30), data.table (≥ 1.14.0)
Suggests: doParallel (≥ 1.0.11), knitr, rmarkdown, testthat (≥ 3.0.0), vdiffr
Published: 2022-02-11
Author: Jake Hughey [aut, cre], Elliot Outland [aut]
Maintainer: Jake Hughey <jakejhughey at>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
CRAN checks: deltaccd results


Reference manual: deltaccd.pdf


Package source: deltaccd_1.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): deltaccd_1.0.2.tgz, r-oldrel (arm64): deltaccd_1.0.2.tgz, r-release (x86_64): deltaccd_1.0.2.tgz, r-oldrel (x86_64): deltaccd_1.0.2.tgz


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