dynplot: Visualising Single-Cell Trajectories

Visualise a single-cell trajectory as a graph or dendrogram, as a dimensionality reduction or heatmap of the expression data, or a comparison between two trajectories as a pairwise scatterplot or dimensionality reduction projection. Saelens and Cannoodt et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Version: 1.1.1
Depends: R (≥ 3.0.0)
Imports: assertthat, dplyr, dynutils (≥ 1.0.2), dynfeature (≥ 1.0.0), dyndimred (≥ 1.0.0), dynwrap (≥ 1.0.0), GA, ggforce, ggplot2 (≥ 3.0), ggraph (≥ 2.0), ggrepel, igraph, MASS, methods, patchwork, purrr, reshape2, tibble, tidyr, tidygraph, vipor
Suggests: covr, hexbin, knitr, RColorBrewer, rje, rmarkdown, testthat (≥ 3.0.0), uwot
Published: 2021-06-28
Author: Robrecht Cannoodt ORCID iD [aut, cre, cph], Wouter Saelens ORCID iD [aut]
Maintainer: Robrecht Cannoodt <rcannood at gmail.com>
BugReports: https://github.com/dynverse/dynplot/issues
License: MIT + file LICENSE
URL: https://github.com/dynverse/dynplot
NeedsCompilation: no
Materials: NEWS
CRAN checks: dynplot results

Downloads:

Reference manual: dynplot.pdf
Vignettes: generate_file_from_container(x)
Package source: dynplot_1.1.1.tar.gz
Windows binaries: r-devel: dynplot_1.1.1.zip, r-release: dynplot_1.1.1.zip, r-oldrel: dynplot_1.1.1.zip
macOS binaries: r-release (arm64): dynplot_1.1.1.tgz, r-release (x86_64): dynplot_1.1.1.tgz, r-oldrel: dynplot_1.1.1.tgz
Old sources: dynplot archive

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