haploR: Query HaploReg and RegulomeDB

A set of utilities for querying HaploReg <http://archive.broadinstitute.org/mammals/haploreg/haploreg.php> and RegulomeDB <http://www.regulomedb.org> web-based tools. The package connects to HaploReg or RegulomeDB, searches and downloads results, without opening web pages, directly from R environment. Results are stored in a data frame that can be directly used in various kinds of downstream analyses.

Version: 1.4.6
Depends: R (≥ 3.3.2)
Imports: httr, XML, tibble, RUnit
Suggests: knitr, rmarkdown, openxlsx
Published: 2017-06-12
Author: Ilya Y. Zhbannikov [aut, cre], Konstantin G Arbeev [ctb] (Konstantin supervised the technical/software development.), Anatoliy I Yashin [ctb] (Anatoliy supervised the technical/software development and is a Principal Invesigator of this project)
Maintainer: Ilya Y. Zhbannikov <ilya.zhbannikov at duke.edu>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: haploR results

Downloads:

Reference manual: haploR.pdf
Vignettes: Tutorial for haploR package
Package source: haploR_1.4.6.tar.gz
Windows binaries: r-devel: haploR_1.4.6.zip, r-release: haploR_1.4.6.zip, r-oldrel: haploR_1.4.6.zip
OS X El Capitan binaries: r-release: haploR_1.4.6.tgz
OS X Mavericks binaries: r-oldrel: haploR_1.4.6.tgz
Old sources: haploR archive

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