knitr: A General-Purpose Package for Dynamic Report Generation in R

Provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.

Version: 1.49
Depends: R (≥ 3.6.0)
Imports: evaluate (≥ 0.15), highr (≥ 0.11), methods, tools, xfun (≥ 0.48), yaml (≥ 2.1.19)
Suggests: bslib, codetools, DBI (≥ 0.4-1), digest, formatR, gifski, gridSVG, htmlwidgets (≥ 0.7), jpeg, JuliaCall (≥ 0.11.1), magick, litedown, markdown (≥ 1.3), png, ragg, reticulate (≥ 1.4), rgl (≥ 0.95.1201), rlang, rmarkdown, sass, showtext, styler (≥ 1.2.0), targets (≥ 0.6.0), testit, tibble, tikzDevice (≥ 0.10), tinytex (≥ 0.46), webshot, rstudioapi, svglite
Published: 2024-11-08
DOI: 10.32614/CRAN.package.knitr
Author: Yihui Xie ORCID iD [aut, cre], Abhraneel Sarma [ctb], Adam Vogt [ctb], Alastair Andrew [ctb], Alex Zvoleff [ctb], Amar Al-Zubaidi [ctb], Andre Simon [ctb] (the CSS files under inst/themes/ were derived from the Highlight package http://www.andre-simon.de), Aron Atkins [ctb], Aaron Wolen [ctb], Ashley Manton [ctb], Atsushi Yasumoto ORCID iD [ctb], Ben Baumer [ctb], Brian Diggs [ctb], Brian Zhang [ctb], Bulat Yapparov [ctb], Cassio Pereira [ctb], Christophe Dervieux [ctb], David Hall [ctb], David Hugh-Jones [ctb], David Robinson [ctb], Doug Hemken [ctb], Duncan Murdoch [ctb], Elio Campitelli [ctb], Ellis Hughes [ctb], Emily Riederer [ctb], Fabian Hirschmann [ctb], Fitch Simeon [ctb], Forest Fang [ctb], Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty), Garrick Aden-Buie [ctb], Gregoire Detrez [ctb], Hadley Wickham [ctb], Hao Zhu [ctb], Heewon Jeon [ctb], Henrik Bengtsson [ctb], Hiroaki Yutani [ctb], Ian Lyttle [ctb], Hodges Daniel [ctb], Jacob Bien [ctb], Jake Burkhead [ctb], James Manton [ctb], Jared Lander [ctb], Jason Punyon [ctb], Javier Luraschi [ctb], Jeff Arnold [ctb], Jenny Bryan [ctb], Jeremy Ashkenas [ctb, cph] (the CSS file at inst/misc/docco-classic.css), Jeremy Stephens [ctb], Jim Hester [ctb], Joe Cheng [ctb], Johannes Ranke [ctb], John Honaker [ctb], John Muschelli [ctb], Jonathan Keane [ctb], JJ Allaire [ctb], Johan Toloe [ctb], Jonathan Sidi [ctb], Joseph Larmarange [ctb], Julien Barnier [ctb], Kaiyin Zhong [ctb], Kamil Slowikowski [ctb], Karl Forner [ctb], Kevin K. Smith [ctb], Kirill Mueller [ctb], Kohske Takahashi [ctb], Lorenz Walthert [ctb], Lucas Gallindo [ctb], Marius Hofert [ctb], Martin ModrĂ¡k [ctb], Michael Chirico [ctb], Michael Friendly [ctb], Michal Bojanowski [ctb], Michel Kuhlmann [ctb], Miller Patrick [ctb], Nacho Caballero [ctb], Nick Salkowski [ctb], Niels Richard Hansen [ctb], Noam Ross [ctb], Obada Mahdi [ctb], Pavel N. Krivitsky ORCID iD [ctb], Pedro Faria [ctb], Qiang Li [ctb], Ramnath Vaidyanathan [ctb], Richard Cotton [ctb], Robert Krzyzanowski [ctb], Rodrigo Copetti [ctb], Romain Francois [ctb], Ruaridh Williamson [ctb], Sagiru Mati ORCID iD [ctb], Scott Kostyshak [ctb], Sebastian Meyer [ctb], Sietse Brouwer [ctb], Simon de Bernard [ctb], Sylvain Rousseau [ctb], Taiyun Wei [ctb], Thibaut Assus [ctb], Thibaut Lamadon [ctb], Thomas Leeper [ctb], Tim Mastny [ctb], Tom Torsney-Weir [ctb], Trevor Davis [ctb], Viktoras Veitas [ctb], Weicheng Zhu [ctb], Wush Wu [ctb], Zachary Foster [ctb], Zhian N. Kamvar ORCID iD [ctb], Posit Software, PBC [cph, fnd]
Maintainer: Yihui Xie <xie at yihui.name>
BugReports: https://github.com/yihui/knitr/issues
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: https://yihui.org/knitr/
NeedsCompilation: no
SystemRequirements: Package vignettes based on R Markdown v2 or reStructuredText require Pandoc (http://pandoc.org). The function rst2pdf() requires rst2pdf (https://github.com/rst2pdf/rst2pdf).
Citation: knitr citation info
Materials: NEWS
In views: ReproducibleResearch
CRAN checks: knitr results

Documentation:

Reference manual: knitr.pdf
Vignettes: Display Tables with the JavaScript Library DataTables (source, R code)
Templating with knit_expand() (source, R code)
Not an Introduction to knitr (source, R code)
An R Markdown Vignette with knitr (source, R code)
knitr Reference Card (source)
R Markdown with the Docco Classic Style (source)
R Markdown with the Docco Linear Style (source)
Custom Print Methods (source)
An R HTML Vignette with knitr (source)

Downloads:

Package source: knitr_1.49.tar.gz
Windows binaries: r-devel: knitr_1.49.zip, r-release: knitr_1.49.zip, r-oldrel: knitr_1.49.zip
macOS binaries: r-release (arm64): knitr_1.49.tgz, r-oldrel (arm64): knitr_1.49.tgz, r-release (x86_64): knitr_1.49.tgz, r-oldrel (x86_64): knitr_1.49.tgz
Old sources: knitr archive

Reverse dependencies:

Reverse depends: basecallQC, BoneProfileR, cTOST, DeMixT, docknitr, FAMetA, fda.usc, frequency, frequencyConnectedness, Guitar, knitxl, LabRS, mathml, multiverse, NatureSounds, PopGenReport, qra, ReportingTools, rmdHelpers, ROCpAI, rrecsys, sangeranalyseR, spThin, tab, tangram, tidycharts, tufterhandout, xtsum
Reverse imports: abseqR, accessrmd, actel, actuaRE, ADAM, ADAMgui, adea, AdhereRViz, ADPclust, AgroR, ahpsurvey, alpha.correction.bh, amanida, AMARETTO, amplican, Anaquin, animint2, APCtools, apsimx, archeoViz, archetyper, arsenal, artpack, AssetCorr, ASSISTant, attachment, autoharp, automagic, autoMrP, AutoScore, bandle, baytrends, BCHM, bcrm, behaviorchange, BGVAR, binb, BiocCheck, BiocStyle, BiocWorkflowTools, BioInsight, bipl5, blandr, BLCOP, blogdown, bookdown, boot.heterogeneity, bpmnR, BrailleR, brainKCCA, businessPlanR, CALANGO, CausalQueries, ccostr, CCSRfind, CEMiTool, cheese, chicane, chronicle, chunkhooks, cleaner, clinDataReview, clinUtils, ClustImpute, cocons, codaredistlm, codebook, codified, cola, colorrepel, compareGroups, COMPASS, compcodeR, condformat, condir, confidence, conflr, corrgrapher, corto, countries, covid19tunisia, cpsurvsim, crsra, crt2power, CTSV, customiser, cystiSim, dabr, dagirlite, data.validator, dataCompareR, DataPackageR, dbglm, DCEtool, DEGreport, DeltaMAN, dematel, dendroTools, DescrTab2, details, DImodelsMulti, DiscoRhythm, distill, dlookr, DmelSGI, dogesr, dosedesignR, DQAgui, DQAstats, DynareR, earlywarnings, easyORtables, eCerto, ecr, eHDPrep, encryptr, ENMTools, envirem, epifitter, epitab, epitweetr, epoxy, equatiomatic, erccdashboard, ergm, esATAC, esmtools, estadistica, EviewsR, exams, exams.forge, exams2forms, exams2learnr, ezknitr, facerec, FFTrees, FishPhyloMaker, fitPS, flexdashboard, flexsiteboard, flextable, flipbookr, flowAI, flowBeads, flowPloidy, flying, FlyingR, forestRK, formattable, FormulR, funGp, funspotr, furniture, genMCMCDiag, genogeographer, GEOexplorer, gerda, getable, ggPMX, ggtibble, gistr, gitdown, glossary, glossr, Gmisc, gmoTree, grapesAgri1, grateful, Greg, gretlR, gtExtras, GWASinspector, gWQS, HaploCatcher, hdxmsqc, HGraph, Hmisc, HMP16SData, HMP2Data, hoardeR, hoodscanR, hR, htmlreportR, htmlTable, htmlwidgets, ICED, iCellR, ideal, igate, iheatmapr, imgrec, INSPECTumours, interfacer, IntramiRExploreR, intRinsic, IOHanalyzer, iotables, iraceplot, ivdesc, JSmediation, juicedown, JuliaCall, kableExtra, kfa, kfigr, kinship2, knitLatex, knitrBootstrap, knitrdata, LatentBMA, learnr, lemon, lessR, levi, lfmm, lifeR, liftr, lightparser, lillies, lingglosses, linguisticsdown, link, linl, lintr, lipidomeR, LipinskiFilters, lomb, lorem, lrd, LTASR, madshapR, manipulateWidget, marked, marlod, matlib, mclustAddons, memor, MendelianRandomization, meshr, MetaIntegration, MetaLandSim, metapower, metathis, mgwrsar, micsr, midasHLA, minidown, mitch, Mmcsd, mmstat4, moderndive, modest, mosaicModel, movegroup, MRZero, MultBiplotR, multisensi, MVNtestchar, NACHO, ncappc, netSEM, nlive, nlmixr2est, nlmixr2extra, nlraa, occumb, officedown, omicplotR, opencpu, OpenStats, oppti, Orcs, ORION, orloca, oRus, ottrpal, PAFit, pakret, PAMpal, panelvar, papaja, pathfindR, PathoStat, patientProfilesVis, pcaExplorer, PFIM, phase1PRMD, PhenStat, PheVis, pikchr, pinp, PINstimation, pipeComp, pixiedust, pkgnet, Platypus, plotcli, plotscaper, plumbertableau, plume, pmxpartab, pointblank, polmineR, polymapR, polyqtlR, PolySTest, PoPdesign, powertools, PreKnitPostHTMLRender, prettyglm, printr, pRoloc, protGear, PTXQC, PublicWorksFinanceIT, pysd2r, qbld, qcmetrics, qmethod, qPLEXdata, qpNCA, qreport, qtkit, QurvE, qwraps2, rADA, radiant.data, RagGrid, rAmCharts, rasciidoc, ratlas, rcarbon, RCAS, rchallenge, RclusTool, RCPA3, rdtLite, readme2vignette, rebook, regionReport, regmed, remedy, REPLesentR, reportfactory, reportRmd, reprex, Revticulate, rgl, rgoogleclassroom, RiboCrypt, rim, RITAN, rjdmarkdown, rleafmap, RLumShiny, rmarkdown, RmdConcord, rmdformats, rmdpartials, rmdwc, rms, rmsb, rmzqc, rnmamod, ROC, rosetta, roxygen2, rpact, rphylopic, Rqc, rqti, rsf, rsimsum, RTCGA, rtemps, rTG, rticles, RTLknitr, SafeVote, saseR, SASmarkdown, SBGNview, SBGNview.data, scan, scider, scientific, scifer, scmeth, scoringRules, SCRIP, script, scTensor, scTGIF, sdcMicro, sdcTable, sdtmval, SEIRfansy, seminr, SemNetDictionaries, shinydrive, shinyobjects, simaerep, sjPlot, sketchy, skimr, smallsets, smartDesign, snplinkage, SNSequate, SouthParkRshiny, spANOVA, SpatialfdaR, SPB, spelling, spiro, SpTe2M, SSIMmap, stabiliser, Statamarkdown, statgenGxE, statgenSTA, stats4teaching, Statsomat, statsr, statVisual, stranslate, struct, survMisc, svSweave, SynDI, table1, tables, talkr, targets, TBox, TCGAbiolinks, tci, teal.reporter, testcorr, TestGardener, texPreview, text2speech, TGST, threeBrain, tidydatatutor, tidypredict, tidywater, tint, TnT, tpfp, TPP, tradepolicy, trelliscopejs, ttt, tufte, twoxtwo, ubiquity, ufs, umx, UPG, upstartr, URooTab, usedthese, vcpen, VDSM, vectorsurvR, VicmapR, vidger, visxhclust, vitae, voiceR, volker, vote, vtable, warbleR, weatherOz, webexercises, workflowr, wrappedtools, wrProteo, xaringan, xaringanExtra, yamlet, ZygosityPredictor
Reverse suggests: a4Classif, a4Core, a4Preproc, a4Reporting, AalenJohansen, ABACUS, ABC.RAP, abess, ABHgenotypeR, abmR, abn, absorber, abstr, abstractr, AcademicThemes, academictwitteR, accelerometry, AccelStab, AcceptReject, accessibility, accessr, accrualPlot, ACE, ace2fastq, ACEsimFit, ACEt, Achilles, acnr, act, ActFrag, activAnalyzer, activatr, ActivePathways, ActivityIndex, actLifer, actuaryr, actxps, ADAPT, adaptDiag, AdaptGauss, adaptiveGPCA, adaptIVPT, adaptMT, adaptr, adaR, AdaSampling, adass, add2ggplot, addinsOutline, additive, additivityTests, addScales, adductData, adductomicsR, adegraphics, adelie, adepro, adept, adespatial, adestr, adfExplorer, adformR, AdhereR, ADImpute, adjclust, adjustedCurves, ADLP, admiral, admiral.test, admiraldev, admiralonco, admiralophtha, admiralpeds, admiralvaccine, admix, admixr, admmDensestSubmatrix, ADMMsigma, admtools, ADMUR, adnuts, adobeanalyticsr, adoptr, adpss, AdvancedBasketballStats, adventr, adverSCarial, AdverseEvents, adw, aebdata, aeddo, aedseo, aelab, AeRobiology, AeroSampleR, afcharts, afdx, afex, affiner, affinity, AffiXcan, affycoretools, afpt, AFR, afttest, ag5Tools, agena.ai, agfh, aggregateBioVar, aggTrees, AGHmatrix, aglm, agricolaeplotr, agridat, agriutilities, agriwater, ags, agua, AHEnsDbs, AHLRBaseDbs, AHM, AHMassBank, AHMeSHDbs, ahMLE, ahnr, AHPathbankDbs, AHPtools, ahptopsis2n, AHPubMedDbs, AHPWR, AHWikipathwaysDbs, aIc, aides, aifeducation, aihuman, aion, AIPW, aire.zmvm, airGR, airGRdatassim, airGRiwrm, airGRteaching, AirMonitor, airpart, airportr, airqualityES, airr, airt, airway, AIscreenR, AIUQ, ajv, akc, alabaster, alabaster.base, alabaster.bumpy, alabaster.files, alabaster.mae, alabaster.matrix, alabaster.ranges, alabaster.sce, alabaster.schemas, alabaster.se, alabaster.spatial, alabaster.string, alabaster.vcf, alakazam, aLBI, alcyon, ALDEx2, aldvmm, ale, alevinQC, ALFAM2, alfr, alfred, algo, algorithmia, alien, alkahest, allcontributors, alleHap, AllelicImbalance, AllelicSeries, allestimates, allMT, allofus, Allspice, ALLSPICER, alluvial, almanac, alookr, alpaca, AlphaBeta, alphabetr, alphaci, AlphaMissense.v2023.hg19, AlphaMissense.v2023.hg38, AlphaMissenseR, alphaN, AlphaPart, AlphaSimR, alphavantager, AlpsNMR, altair, altdoc, ALUES, amadeus, amanpg, amapGeocode, amapro, AMAPVox, AMARETTO, amazonadsR, amazons3R, amazonspR, ambit, AMCTestmakeR, Amelia, amelie, amen, amerifluxr, ammistability, AMModels, AMOUNTAIN, amp, ampir, AMPLE, AMR, amscorer, amt, anabel, AnaCoDa, analogsea, AnalysisLin, analyzer, AnanseSeurat, AncestryMapper, AnchorRegression, ANCOMBC, and, andrews, Andromeda, andurinha, AneuFinder, ANF, AnglerCreelSurveySimulation, anim.plots, animalcules, AnimalSequences, animate, animbook, anipaths, anndata, AnnoProbe, annotate, annotater, AnnotationBustR, AnnotationDbi, AnnotationFilter, AnnotationForge, AnnotationHub, AnnotationHubData, annotatr, ANOFA, ANOM, anomalize, anomo, ANOPA, anota2seq, anovir, anscombiser, antaresEditObject, antaresProcessing, antaresRead, antaresViz, AnthropMMD, Anthropometry, anticlust, antitrust, AnVIL, AnVILAz, AnVILBase, AnVILBilling, AnVILGCP, AnVILPublish, AnVILWorkflow, anyLib, ao, aoos, aopdata, aorsf, AOV1R, apa, apache.sedona, APackOfTheClones, APAlyzer, apaTables, APCalign, apcf, apcluster, aPEAR, apeglm, apex, apexcharter, aphid, api2lm, apisensr, APL, aplore3, apmx, Apoderoides, apollo, appeears, appleadsR, applicable, appsflyeR, apyramid, aqp, AquaBEHER, AQuadtree, AquaticLifeHistory, arcgeocoder, ArchaeoPhases, archeofrag, archetypal, archivist, archivist.github, arcpullr, arcpy, arctools, ards, areal, arealDB, arena2r, arenar, arf, argoFloats, argonR, ARGOS, argparse, ari, ARIbrain, arkdb, arlclustering, armspp, ARPALData, ARPobservation, arrangements, arrayQualityMetrics, arrow, artMS, ARTofR, ARTool, ARTtransfer, ARUtools, aRxiv, ASAFE, ascii, asciicast, asciiSetupReader, ascotraceR, ashapesampler, AshkenazimSonChr21, ashr, ASICS, ASICSdata, askgpt, ASMap, asmbPLS, aspi, aspline, aSPU, ASRgenomics, assertable, assertions, assertr, assessor, AssessORF, ASSET, AssetAllocation, ASSIGN, assignPOP, assignR, AssocBin, assorthead, ast2ast, asteRisk, ASURAT, asus, asymmetry, asymptor, atable, ATACseqQC, ATACseqTFEA, ATbounds, ATE.ERROR, atena, ath1121501frmavecs, atime, atlasapprox, AtlasMaker, ATNr, atpolR, ATQ, atrrr, atSNP, attempt, attention, attrib, AUCell, auctestr, auctionr, audiometry, auditor, augmentedRCBD, auk, aum, ausplotsR, AustralianPoliticians, AUtests, auth0, auto.pca, AutoDeskR, autoFC, autohrf, autoimage, autonomics, autoplotly, autoRasch, autoReg, autoScorecard, autoslider.core, autostats, autostsm, autothresholdr, autoTS, autovi, AutoWMM, avar, AvInertia, aVirtualTwins, avocado, avotrex, aweek, aweSOM, AWFisher, awinR, aws.alexa, aws.ecx, aws.wrfsmn, awst, azlogr, AzureAuth, AzureCognitive, AzureContainers, AzureCosmosR, AzureGraph, AzureKeyVault, AzureKusto, azuremlsdk, AzureQstor, AzureRMR, AzureStor, AzureTableStor, AzureVision, AzureVM, BaalChIP, babelgene, babette, babynamesIL, backbone, backpipe, backShift, baclava, bacon, bacondecomp, baffle, bage, baggr, bagyo, bain, bakeoff, baker, bakR, baldur, Ball, ballgown, BALLI, bama, bambu, bamlss, bamm, bamp, bamsignals, bandicoot, banditpam, BANDITS, banditsCI, banffIT, bang, bangladesh, Banksy, bannerCommenter, banocc, BANOVA, baorista, BAR, baRcodeR, barcodetrackR, bark, barrks, BART, bartcs, baRulho, BAS, base.rms, base64url, baseballr, basedosdados, basemodels, BaseSet, BASiCS, BASiCStan, BasicSTARRseq, basictabler, basilisk, basilisk.utils, BASiNET, BASiNETEntropy, basket, baskexact, batata, batchelor, BatchGetSymbols, batchmix, BatchQC, batchtma, batchtools, bate, BAwiR, bayclumpr, bayes4psy, bayesAB, bayesanova, bayesassurance, BayesCombo, bayesCT, bayesdfa, BayesDLMfMRI, bayesDP, BayesESS, BayesFactor, BayesfMRI, bayesforecast, BayesGmed, BayesGOF, BayesGP, BayesGrowth, bayesian, BayesianMCPMod, BayesianMediationA, BayesianNetwork, BayesianPlatformDesignTimeTrend, BayesianPower, BayesianReasoning, BayesianTools, bayesianVARs, bayesImageS, bayeslm, BayesLN, bayesm, BayesMallows, bayesMeanScale, bayesmeta, bayesmlogit, bayesmove, bayesnec, bayesplay, bayesplot, bayesPO, BayesPostEst, BayesPPD, BayesPPDSurv, bayesRecon, Bayesrel, bayesrules, BayesSampling, BayesSpace, BayesSUR, BayesSurvival, BayesSurvive, bayestestR, BayesTools, BayesVarSel, bayfoxr, baymedr, bayNorm, bazar, bbknnR, bbmix, bbmle, bbnet, bbotk, bbreg, bbw, bcaboot, BCClong, BCDAG, bcdata, BCEA, bcf, Bchron, BClustLonG, bcmaps, bcpa, bcROCsurface, bcSeq, BCSub, bdc, BDgraph, bdl, bdlp, bdots, BDP2, bdpar, bdrc, bdscale, beachmat, beachmat.hdf5, beadarray, BeadDataPackR, beadplexr, BeadSorted.Saliva.EPIC, beakr, beanz, beastier, beastt, beautier, BEclear, BED, bedr, BeeBDC, beeca, BeeGUTS, beer, beezdemand, behavr, belg, BElikelihood, bellreg, benchmarkfdrData2019, benchmarkme, bennu, benthos, Bernadette, berryFunctions, BERT, besthr, bestNormalize, BESTree, bestridge, betaclust, betaDelta, betaHMM, betaMC, betaNB, BetaPASS, betareg, betaSandwich, betaselectr, BETS, bettr, BeviMed, BFF, BFI, BFpack, bfpwr, bfw, BG2, BgeeCall, BgeeDB, BGGM, bggum, BGmisc, bgms, BGPhazard, bgw, bhmbasket, BHMSMAfMRI, BHSBVAR, bib2df, bibliometrix, biblionetwork, BiCausality, biClassify, biclustermd, BICORN, bidask, BiDimRegression, BIEN, bife, BiFET, bifurcatingr, BIGDAWG, bigDM, bigergm, BIGL, biglasso, bigleaf, bigMap, bignum, bigQF, bigstep, BigVAR, billboarder, BinarybalancedCut, BinaryDosage, binaryMM, BindingSiteFinder, binfunest, bingadsR, binGroup2, binman, BinMat, binomialRF, binovisualfields, BinSegBstrap, binsegRcpp, BINtools, bio3d, bioacoustics, bioassayR, Biobase, biobroom, biobtreeR, bioC.logs, bioCancer, BioCartaImage, BiocBaseUtils, BiocBook, BiocFHIR, BiocFileCache, BiocHubsShiny, BiocIO, BioCircos, BiocManager, BiocNeighbors, biocompute, BioCor, BiocParallel, BiocPkgTools, BioCro, biocroxytest, BiocSet, BiocSingular, BiocSklearn, biocthis, biocViews, biodb, biodbChebi, biodbHmdb, biodbNcbi, biodbNci, biodbUniprot, biodosetools, BioGA, biogas, biogram, biogrowth, Bioi, BioImageDbs, bioimagetools, bioinactivation, biomaRt, BioMartGOGeneSets, biomartr, BIOMASS, biometryassist, biomformat, biomod2, BioNAR, BioNERO, biopixR, BioPlex, BioPred, BioQC, bioRad, bioregion, BioRssay, biosampleR, biosensors.usc, bioseq, biosigner, bioSNR, Biostatistics, Biostrings, biotic, BioTIMEr, BioTIP, biotmle, biotools, BioVenn, bipartite, bipartiteD3, bipd, biplotEZ, birdie, birdscanR, biscale, biscuiteer, biscuiteerData, BisqueRNA, bistablehistory, bit, bitmexr, bittermelon, BivRec, biwavelet, bizdays, bkmrhat, BKTR, BLA, blackmarbler, blacksheepr, blaise, BlandAltmanLeh, blapsr, blastula, blima, blindreview, blink, bliss, BlockCov, blockCV, blocklength, BloodCancerMultiOmics2017, BloodGen3Module, blorr, BLPestimatoR, blscrapeR, bluebike, bluster, bmass, bmggum, bmlm, bmm, BMRBr, bmscstan, bmstdr, bnbc, bnclassify, bndovb, bnem, bnma, bnmonitor, BNPdensity, bnpsd, bnRep, BNrich, bnstruct, BOBaFIT, bodenmiller, bodycompref, bodymapRat, BOJ, bolsec, BoltzMM, bonsai, bonsaiforest, boomer, boostingDEA, bootCT, bootf2, bootGOF, bootPLS, bootUR, bootwar, borealis, borrowr, BoSSA, BOSSreg, BoundaryStats, boundingbox, BoutrosLab.plotting.general, box, box.linters, boxfilter, boxly, boxr, bp, bpa, bpbounds, bpnreg, bpp, BPRMeth, bRacatus, BRACE, bracer, brada, braidReports, braidrm, BranchGLM, branchpointer, BRcal, BRDT, brea, BREADR, breakaway, breakDown, breakfast, breakpointR, breakpointRdata, breathtestcore, breathteststan, brendaDb, BRETIGEA, BREW3R.r, brgedata, brglm2, brickset, brickster, BridgeDbR, bridgedist, bridgesampling, brinton, brisk, brm, brms, brms.mmrm, brmsmargins, broadSeq, BrokenAdaptiveRidge, brokenstick, brolgar, broom, broom.helpers, broom.mixed, brotli, BrowserViz, brunnermunzel, BRVM, bs4cards, bs4Dash, bscui, BSgenomeForge, bSi, bSims, bsitar, bslib, BSPBSS, bsplus, bsseq, bssm, BSSoverSpace, bst, bstrl, BSTZINB, bsub, bsvars, BSW, bsynth, BT, btb, BTYD, BTYDplus, bubbleHeatmap, BubbleTree, bubblyr, bugphyzz, bugsigdbr, buildmer, buildr, bulkAnalyseR, bulkreadr, bulletcp, bullseye, bumbl, bumblebee, BUMHMM, BumpyMatrix, bunching, bunchr, bundle, bupaverse, burnr, BUScorrect, busdater, BUSpaRse, BUSseq, butcher, bvartools, bvhar, bwsTools, bytescircle, c2c, c2z, c3, C50, CACIMAR, cadd.v1.6.hg19, cadd.v1.6.hg38, CADF, CaDrA, CAEN, caesar, CAESAR.Suite, CAGEfightR, cageminer, CAGEr, CAISEr, CalcThemAll.PRM, calculus, calendar, calibmsm, calibrar, CalibrationCurves, calidad, callback, callme, callsync, calm, calmr, calpassapi, camcorder, campaignmanageR, campfin, campsis, campsismod, camsRad, camtrapR, CaMutQC, canadamaps, canadianmaps, canaper, cancensus, canceR, CancerEvolutionVisualization, cancerR, cancerscreening, candisc, Canek, canprot, cansim, canvasXpress, cape, caper, capitalR, capl, captr, car, caracas, caRamel, carbonate, carbondate, carbonr, card, card.pro, 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rex, rexer, rexposome, rextendr, rfacebookstat, rfacts, rfaRm, rfars, Rfastp, RFCCA, RfEmpImp, rfigshare, rfishbase, rfishdraw, rflexscan, RFlocalfdr, RFLPtools, rflsgen, rfm, Rfolding, Rforestry, RforProteomics, RFPM, RFpredInterval, Rfssa, rfVarImpOOB, rgbif, RGCCA, RGCxGC, rgee, rgeedim, rgen, RGENERATE, RGENERATEPREC, rGenomeTracks, rGenomeTracksData, rgexf, RGF, Rgff, rGhanaCensus, rgho, rgl.cry, rgl2gltf, rglobi, rgm, RGMQLlib, rgnoisefilt, RgnTX, Rgof, rgoogleads, rgoogleslides, rgoslin, rgplates, rgraph6, RGraphSpace, rgrass, rGREAT, RGremlinsConjoint, RGSEA, rgsepd, rgTest, rgtmx, rgugik, rhandsontable, rhdf5, rhdf5client, rhdf5filters, Rhdf5lib, rhierbaps, rhino, rhinotypeR, Rhisat2, rhoneycomb, rhoR, rhosa, RHPCBenchmark, RHRT, RHRV, Rhtslib, rhub, RHybridFinder, rhymer, ri2, RIA, RIbench, RiboDiPA, RiboProfiling, ribor, ribosomeProfilingQC, rice, ricu, RIdeogram, ridgetorus, ridigbio, riem, Riemann, Riex, rifi, rifiComparative, Rigma, rigr, RImmPort, rimu, rinat, ring, 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RnaSeqSampleSizeData, rnassqs, rnaturalearth, rnaturalearthdata, rnbp, rNeighborGWAS, rNeighborQTL, rnetcarto, RNewsflow, RNeXML, RNGforGPD, RNHANES, Rnits, Rnmr1D, rnn, rnndescent, rnnmf, rnpn, rnrfa, roadoi, roads, roahd, roastgsa, robber, robCompositions, robin, RobinCar, robis, RoBMA, robmed, robnptests, robotoolbox, robotstxt, RoBSA, robsel, robservable, robsurvey, RoBTT, robust2sls, robustfa, robustlm, robustmatrix, robvis, ROCaggregator, rocbc, ROCFTP.MMS, ROCit, rock, rocker, rockr, rococo, ROCpAI, ROCR, ROCsurf, rODE, rodeo, rofanova, Rogue, rolap, RolDE, rollama, rolldown, rollup, rolog, rolr, rols, romic, roots, rope, ROpenCVLite, ropenmeteo, roperators, ropercenter, ropls, rorcid, ROSeq, roseRF, rosetteApi, rosmium, rosv, rotations, rotl, round, roundwork, Routliers, roxytest, RPA, rPACI, Rpadrino, rpaleoclim, rPBK, RPEXE.RPEXT, rpf, RPhosFate, rpivotTable, rplanes, rplum, rpmodel, Rpoet, RPointCloud, Rpolyhedra, RPostgres, RPPASPACE, rpredictit, rPref, RPresto, rprev, rprime, rprimer, rprintf, RprobitB, Rprofet, rprojroot, rprojtree, RProtoBufLib, rpsftm, rptR, rpx, RPyGeo, rqdatatable, RQdeltaCT, RQEntangle, rqPen, rQSAR, rqt, rquery, Rraven, rRDP, rrefine, rrMixture, RRMLRfMC, rroad, RRphylo, RRPP, rrr, RRreg, RRRR, rrscale, rrtable, RRTCS, rrvgo, rsae, rSAFE, RSAGA, rsample, Rsampling, Rsamtools, rsat, rsatscan, rscc, RScelestial, rsconnect, rscopus, rscorecard, rScudo, RSDA, rSDI, rsdmx, rSEA, RSelenium, rsemmed, RSentiment, RSeqAn, rsetse, rsi, rsinaica, rslurm, rsm, rsmatch, rsmatrix, rsocialwatcher, rsofun, rsolr, RSP, Rspc, rSPDE, RSpectra, rsppfp, RSQL, RSQLite, RSqlParser, RSSthemes, rstac, rstan, rstanarm, rstanemax, rstantools, rstatix, rstiefel, rstudioapi, rsurv, rsurveycto, rsvddpd, rsvg, rSWeeP, rsyncrosim, rt, rtables, RTCC, RTCGA.clinical, RTCGA.CNV, RTCGA.methylation, RTCGA.miRNASeq, RTCGA.mRNA, RTCGA.mutations, RTCGA.PANCAN12, RTCGA.rnaseq, RTCGA.RPPA, RTCGAToolbox, rTCRBCRr, rtdists, rTensor2, rticulate, rtiddlywiki, rties, RTIGER, rtika, RTMB, rtmpt, RTN, RTNduals, RTNsurvival, rtodoist, rtoot, rTorch, rTPC, Rtpca, rtpcr, Rtrack, RTransferEntropy, rtrek, rtrend, rtrim, rTRIPLEXCWFlux, rTRM, rTRNG, Rtropical, rtry, RTSA, RtsEva, RTTWebClient, rtweet, rTwig, Rtwobitlib, rtype, rubias, rucm, rucrdtw, rugarch, ruin, ruler, rules, rUM, rumidas, ruminate, runcharter, runibic, runjags, runMCMCbtadjust, runner, runstats, rush, rust, RUVcorr, RUVSeq, RVA, rvec, Rveg, RVenn, RVerbalExpressions, rvertnet, rvest, rviewgraph, Rvisdiff, rvisidata, RVS, rwarrior, rwavelet, Rwclust, rWCVP, RWDataPlyr, rwebstat, rwhatsapp, rwicc, rWikiPathways, RWildbook, rWishart, RWmisc, rworkflows, RWsearch, Rwtss, rwty, rxode2, Ryacas, Ryacas0, ryandexdirect, rym, rYoutheria, rYWAASB, RZooRoH, s2net, s3.resourcer, S4Arrays, S4Vectors, S7, sabre, saccadr, SADISA, sadists, saebnocov, saeHB, saeHB.ME.beta, saeHB.panel, saeHB.panel.beta, saeHB.spatial, saeHB.twofold, saeHB.ZIB, saekernel, saePseudo, saeRobust, saeSim, safejoin, safestats, safetyGraphics, sageR, SAIGEgds, salad, salesforcer, SALTSampler, SAMBA, samc, SAME, SAMGEP, sampbias, sampledatasets, samplesize4surveys, samplesizeCMH, SampleSizeDiagnostics, samplezoo, samplingbook, samplingDataCRT, samplingin, samplingR, SamplingStrata, samplr, SAMprior, SAMtool, samurais, SanFranBeachWater, sangerseqR, SangerTools, sanityTracker, sanketphonetictranslator, sankeywheel, SANTA, santaR, santoku, sanzo, saotd, sapevom, sapfluxnetr, sapo, sara4r, SARC, sarp.snowprofile, sarp.snowprofile.alignment, sars, sarsop, sasfunclust, sasr, sass, sassy, satdad, satellite, satres, satuRn, SAVER, savvyr, sBIC, SBICgraph, sbl, sbm, SBMSplitMerge, sbo, sbtools, sbw, SC.MEB, SC2API, SC3, scaeData, scaffolder, ScaledMatrix, scalpel, scanMiR, scanMiRApp, scanMiRData, scAnnotate, scAnnotatR, scAnnotatR.models, scanstatistics, SCANVIS, scaper, scapesClassification, scapGNN, scaRabee, SCArray, SCArray.sat, scATAC.Explorer, scater, scatterbar, scatterD3, scatterHatch, scattermore, scatterpie, scatterPlotMatrix, scBFA, SCBN, scBSP, scBubbletree, scbursts, scCAN, scCATCH, scCB2, scClassify, sccomp, scCustomize, scDataviz, SCDB, scDblFinder, scDD, scDDboost, scde, scDECO, SCdeconR, scDesign3, scDHA, scdhlm, scDiagnostics, scDiffCom, scDIFtest, scDotPlot, scds, scellpam, SCEM, scenes, SCEnt, SCFA, scFeatureFilter, scFeatures, scGate, scGOclust, scGPS, sched, schex, scholar, SchoolDataIT, scHOT, schrute, schtools, schumaker, SCIBER, scicomptools, scifigure, scimo, SCIntRuler, scipub, sciRmdTheme, scISR, scITD, SciViews, scLink, sclr, scmap, scMappR, scMerge, scMET, scMitoMut, scModels, scMultiome, scMultiSim, SCnorm, scone, Sconify, scOntoMatch, SCOPE, scoper, SCOPRO, scorecard, scoredec, scoreInvHap, scorepeak, scoringutils, SCORNET, SCORPIUS, scoup, SCOUTer, scp, scPCA, scpdata, scPipe, scPloidy, scplot, scpoisson, SCpubr, scran, scrapper, scReClassify, scRecover, screenCounter, ScreenR, screenshot, scregclust, scRepertoire, scribe, scriptexec, scriptloc, scrm, 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singleRcapture, singR, singscore, SiPhyNetwork, siplab, SiPSiC, siren, SIRthresholded, sitadela, sitar, sitePath, sitepickR, siteymlgen, SITH, sitmo, sitree, sivirep, sivs, sizeMat, sjlabelled, sjmisc, sjSDM, sjtable2df, skater, skedastic, skellam, sketch, sketcher, sketching, sketchR, skewr, skipTrack, skm, skylight, skyscapeR, slackr, slalom, slanter, slasso, SleepCycles, sleepr, sleev, SLEMI, slendr, Sleuth2, Sleuth3, slgf, slickR, SLIDE, slider, slim, slingshot, slippymath, SLOPE, slouch, slowraker, SLSEdesign, slurmR, smacof, smacpod, SMAD, SmallCountRounding, SMARTbayesR, SmartEDA, smartid, SmartMeterAnalytics, smartsheetr, smartsizer, SmCCNet, smcfcs, smcryptoR, smd, smdi, SMDIC, smerc, SMFilter, smicd, smidm, smile, smiles, SMITE, SMITIDvisu, smlePH, smmR, SMMT, smokingMouse, smooth, smoothclust, smoothic, smoothr, smoothy, smoots, smosr, smovie, smpic, sMTL, smurf, snakecase, snapchatadsR, snapcount, snapKrig, snha, snifter, snotelr, snowflakes, SNPassoc, SNPediaR, SNPfiltR, 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sparseSEM, SparseSignatures, sparsevar, sparsevctrs, SparseVFC, sparta, SPARTAAS, sparvaride, SPAS, spaSim, spatgeom, SpatGRID, spaths, SpatialBSS, SpatialCPie, SpatialDatasets, SpatialDDLS, spatialDE, SpatialDecon, spatialDmelxsim, SpatialEpi, SpatialExperiment, SpatialFeatureExperiment, SpatialGEV, spatialHeatmap, spatialising, SpatialKDE, spatialLIBD, SpatialOmicsOverlay, SpatialPOP, SpatialPosition, SpatialRDD, spatialreg, spatialrisk, spatialsample, spatialSimGP, spatialTIME, spatialwidget, SpaTopic, SpatPCA, spatsoc, spatzie, spbal, spBFA, spBPS, spcadjust, SPCompute, spcosa, spCP, spdep, spdesign, spduration, spdynmod, speakeasyR, speakr, speaq, specieschrom, SPECK, speckle, specklestar, specL, specr, spectacles, spectator, spectr, Spectra, spectralAnalysis, spectralGraphTopology, SpectralTAD, SpectraQL, spectre, Spectrum, sperrorest, SpeTestNP, spfilteR, spgwr, sphunif, SPIAT, spicyR, spikeSlabGAM, spiky, Spillover, spillR, spINAR, spind, spinifex, spiralize, spiritR, splatter, 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tidytable, tidyterra, tidytext, tidytlg, tidytof, tidytransit, tidytreatment, tidytree, tidyUSDA, tidyverse, tidyvpc, tidywikidatar, tidyxl, tigerstats, tigger, tigris, tiktokadsR, tikzDevice, TileDBArray, tilegramsR, tilemaps, tiler, timbeR, timechange, timecoursedata, timeLineGraphics, timeOmics, timeperiodsR, timeplyr, timeR, TimerQuant, timescape, timeSeriesDataSets, timeseriesdb, timetk, TIN, tinkr, tinyarray, tinycodet, tinylabels, tinyplot, tinyscholar, tinytiger, tip, tipa, tipmap, TiPS, TissueEnrich, tissueTreg, TITAN2, titrationCurves, TKCat, tlars, Tlasso, TLCAR, tldr, tlm, TLMoments, tLOH, tm.plugin.koRpus, tmap, TMExplorer, TMixClust, tmod, tmplate, TMSig, tmt, tnl.Test, TNRS, tntpr, TOAST, toastui, tofsimsData, togglr, tokenizers, tomoda, tomoseqr, tongfen, ToolsForCoDa, toolStability, toOrdinal, TOP, topChef, topconfects, topdownr, topicdoc, topiclabels, topics, TopKLists, TopKSignal, topoDistance, topr, toprdata, tor, torch, torchaudio, tornado, tosca, tosr, TOSTER, totalcensus, tourr, toxEval, ToxicoGx, toxpiR, toxSummary, tpAUC, TPD, TPLSr, Tplyr, TPMplt, TPmsm, TPP2D, tpSVG, tr.iatgen, tracee, tracerer, track2KBA, trackdem, trackdf, trackdown, trackeR, tracktables, trackViewer, trade, tradeSeq, tradestatistics, TrafficBDE, traitstrap, traj, trajectories, TrajectoryGeometry, TrajectoryUtils, trajr, tram, tramME, tramnet, tramvs, transcriptogramer, transcriptR, transforEmotion, transform.hazards, transformGamPoi, transfR, TransGraph, transite, translit.uk, transmem, transmogR, transomics2cytoscape, TransOmicsData, TransPhylo, transplantr, transreg, TransTGGM, transx, traudem, trawl, TreatmentPatterns, treats, tree.interpreter, TreeAndLeaf, treebase, TreeBUGS, treeclimbR, treeDA, treedater, treediff, TreeDimensionTest, TreeDist, treefit, treeheatr, treeio, treekoR, treemap, treemapify, treenomial, TreeRingShape, TreeSearch, TreeSimGM, treesliceR, treespace, treestartr, treestats, treestructure, TreeSummarizedExperiment, TreeTools, TREG, trekcolors, trelloR, tremendousr, TrenchR, trendchange, trending, Trendy, TRESS, TRexSelector, triact, TriadSim, TrialEmulation, trialr, triangle, tricolore, tricycle, TriDimRegression, triebeard, tRigon, trimmer, trimr, trinROC, trip, triplot, tripr, TRMF, tRNA, tRNAdbImport, tRNAscanImport, tRnslate, TRONCO, troopdata, TropFishR, trtswitch, truh, TruncatedNormal, TruncExpFam, trustOptim, tryCatchLog, TSAR, tsbox, TSCAN, tscopula, TSCS, tsdataleaks, tsdf, tsdistributions, TSE, TSEind, tseriesEntropy, tseriesTARMA, TSEwgt, tsfeatures, tsfgrnn, tsfknn, tsgarch, tsgc, tsibble, tsmarch, tsmp, tsna, TSrepr, TSstudio, tstests, tstools, tsvio, tsvr, ttgsea, tTOlr, tuber, tuberculosis, tubern, tuckerR.mmgg, tukeytrend, TumourMethData, tune, turner, TurtleGraphics, tutorial.helpers, tv, tvem, tvgeom, tvm, tvmediation, tvR, tvReg, TVTB, tvthemes, tvtools, twang, twangContinuous, twangMediation, twangRDC, tweeDEseqCountData, twfy, Twitmo, twitteradsR, TwitterAutomatedTrading, twn, twoddpcr, twoway, txcutr, txdbmaker, tximeta, tximport, tximportData, txshift, typetracer, u5mr, uavRmp, UBayFS, ubms, UCell, uci, UComp, UCSC.utils, UCSCRepeatMasker, UCSCXenaShiny, UCSCXenaTools, udpipe, uGMAR, uiucthemes, UKB.COVID19, ukbnmr, ukbtools, ukgasapi, UKgrid, uklr, ukpolice, Ularcirc, ulrb, umap, UMI4Cats, umiAnalyzer, Umoments, Umpire, uncoverappLib, understandBPMN, unglue, ungroup, unhcrthemes, unheadr, Unico, unicol, UniExactFunTest, unifDAG, unifed, unifir, uniformly, unigd, unikn, UniProt.ws, UniProtKeywords, Uniquorn, uniset, unitedR, unitizer, unitquantreg, units, UnitStat, unittest, univariateML, universalmotif, unmarked, unmconf, unnest, unpivotr, UnplanSimon, unrepx, unusualprofile, unvotes, UpAndDownPlots, updateme, updateObject, UPDhmm, updog, upndown, upsetjs, UpSetR, uptasticsearch, urbin, urlshorteneR, urltools, ursa, usdarnass, usdatasets, usethis, usfertilizer, USgas, USgrid, ushr, usincometaxes, usl, usmap, uSORT, utf8, utiml, utsf, uwot, uxr, V8, vaccine, vaccineff, vachette, vacuum, vaersvax, VAExprs, vagalumeR, valaddin, VALERIE, valet, valhallr, validann, validata, validate, validatesuggest, valmetrics, valr, valueEQ5D, vamc, VancouvR, vangogh, vapour, varband, varbvs, varclust, VarCon, VARDetect, variancePartition, VariantAnnotation, VariantExperiment, variationalDCM, varitas, varrank, VarSelLCM, VARshrink, varTestnlme, varycoef, VaSP, vatcheckapi, vaultr, vaxpmx, VBTree, VCA, vccp, vcdExtra, VCFArray, vcfppR, vcfR, vchartr, vcr, vctrs, vctsfr, vcvComp, vdg, VDJdive, VDJgermlines, VDPO, VecDep, VectorCodeR, vectorwavelet, VectraPolarisData, VedicDateTime, vegalite, vegan, vegawidget, vegclust, vegdata, vegtable, vein, velociraptor, veloviz, vembedr, VennDetail, versioning, VERSO, vetiver, vetr, vfcp, VFP, VFS, via, Vicus, video, viewscape, villager, VIM, vimp, vimpclust, VIMPS, vinereg, vioplot, vip, viridis, virtualPollen, VirtualPop, virtuoso, virustotal, visa, visachartR, VisCollin, viscomp, viscomplexr, visdat, ViSe, ViSiElse, 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weibulltools, WeightedCluster, WeightedTreemaps, WeightIt, WeightSVM, weitrix, welo, WeMix, weyl, wgaim, WgtEff, WH, whatthreewords, wheatmap, when, where, whereami, whippr, whitebox, WhiteLabRt, WhiteStripe, whitewater, whoa, whomds, whSample, widgetframe, widyr, wiesbaden, wiggleplotr, WikidataR, wikilake, WikipediR, wikitaxa, wikiTools, wildcard, wildlifeDI, wildmeta, wilson, winch, WindCurves, windsoraiR, winfapReader, wingen, WINS, wintime, wishmom, withr, WLogit, womblR, WoodburyMatrix, WoodSimulatR, worcs, wordcloud2, wordler, wordpiece, wordpredictor, WordR, wordspace, workflows, workflowsets, workloopR, worldfootballR, WorldMapR, worldmet, WormTensor, worrms, worrrd, wosr, WOTPLY, woylier, wpa, wpm, wppi, wql, WQM, wqspt, wqtrends, WR, wrapr, wrassp, Wrench, WRestimates, wrGraph, WRI, wrMisc, WRS2, wrswoR, WRTDStidal, wrTopDownFrag, wsrf, wsyn, wTO, WufooR, wv, WVPlots, wwntests, wxgenR, wyz.code.metaTesting, wyz.code.offensiveProgramming, wyz.code.rdoc, wyz.code.testthat, x3ptools, xadmix, xaringanthemer, Xcertainty, xcms, xcore, xcoredata, XDNUTS, xenLite, xesreadR, Xeva, xfun, xgb2sql, xgboost, xgxr, xhaz, XiMpLe, XINA, xlcutter, xlink, XLS, xlsx, xlsx2dfs, xml2, xmlr, xmpdf, xmrr, XNAString, xnet, XNomial, xpectr, xportr, xpose, xpose.xtras, XRJulia, xrnet, xtable, xtranat, xtune, xutils, yamlme, yamss, YAPSA, yardstick, yarn, yarrr, yatah, ycevo, yfR, ymlthis, YPBP, ypr, yyjsonr, zalpha, zctaCrosswalk, zeallot, zebrafishRNASeq, zebu, zeitgebr, zellkonverter, zen4R, zenith, zenplots, ZetaSuite, zFPKM, ZIBR, ZillowR, zinbwave, zipcodeR, zippeR, zipR, ZIprop, zitools, ZLAvian, zlibbioc, zlog, zmisc, zoid, zoltr, zonebuilder, zonohedra, zoolog, zoomerjoin, zoomGroupStats, zscorer, ztable, ztpln, zzlite
Reverse enhances: collapsibleTree, htmltools, kimisc, marginaleffects, networkD3, patchSynctex, svgPanZoom, this.path, threejs, tinytable

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