miLineage: Association Tests for Microbial Lineages on a Taxonomic Tree

A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) <doi:10.1093/bioinformatics/btw804> and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).

Version: 2.1
Depends: R (≥ 3.1.1), MASS, data.table, geepack
Published: 2018-03-23
Author: Zheng-Zheng Tang
Maintainer: Zheng-Zheng Tang <tang at biostat.wisc.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: miLineage results

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Reference manual: miLineage.pdf
Package source: miLineage_2.1.tar.gz
Windows binaries: r-devel: miLineage_2.1.zip, r-release: miLineage_2.1.zip, r-oldrel: miLineage_2.1.zip
OS X binaries: r-release: miLineage_2.1.tgz, r-oldrel: miLineage_2.1.tgz
Old sources: miLineage archive

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