minSNPs: Resolution-Optimised SNPs Searcher

This is a R implementation of "Minimum SNPs" software as described in "Price E.P., Inman-Bamber, J., Thiruvenkataswamy, V., Huygens, F and Giffard, P.M." (2007) <doi:10.1186/1471-2105-8-278> "Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants."

Version: 0.0.1
Depends: R (≥ 3.4.0)
Imports: BiocParallel
Suggests: knitr, testthat, pkgdown, seqinr, Biostrings, rmarkdown, withr
Published: 2021-09-08
Author: Ludwig Kian Soon Hoon ORCID iD [aut, cre], Peter Shaw ORCID iD [aut, ctb], Phil Giffard ORCID iD [aut, ctb]
Maintainer: Ludwig Kian Soon Hoon <ldwgkshoon at gmail.com>
License: MIT + file LICENSE
URL: https://github.com/ludwigHoon/minSNPs
NeedsCompilation: no
Materials: README NEWS
CRAN checks: minSNPs results

Documentation:

Reference manual: minSNPs.pdf
Vignettes: MinSNPs_Workflow

Downloads:

Package source: minSNPs_0.0.1.tar.gz
Windows binaries: r-devel: minSNPs_0.0.1.zip, r-release: minSNPs_0.0.1.zip, r-oldrel: minSNPs_0.0.1.zip
macOS binaries: r-release (arm64): minSNPs_0.0.1.tgz, r-release (x86_64): minSNPs_0.0.1.tgz, r-oldrel: minSNPs_0.0.1.tgz

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