mppR: Multi-Parent Population QTL Analysis

Analysis of experimental multi-parent populations to detect regions of the genome (called quantitative trait loci, QTLs) influencing phenotypic traits. The population must be composed of crosses between a set of at least three parents (e.g. factorial design, 'diallel', or nested association mapping). The functions cover data processing, QTL detection, and results visualization. The implemented methodology is described by Garin, Wimmer, Mezmouk, Malosetti and van Eeuwijk (2017) <doi:10.1007/s00122-017-2923-3>.

Version: 1.3.0
Depends: R (≥ 3.1.0)
Imports: ggplot2, graphics, grDevices, methods, parallel, qtl, stats, utils, igraph
Suggests: testthat
Published: 2021-05-15
Author: Vincent Garin ORCID iD [aut, cre], Valentin Wimmer [aut], Dietrich Borchardt [ctb, dtc], Fred van Eeuwijk [ctb, ths], Marcos Malosetti [ctb, ths]
Maintainer: Vincent Garin <vincent.garin6 at gmail.com>
BugReports: https://github.com/vincentgarin/mppR/issues
License: GPL-3
URL: https://github.com/vincentgarin/mppR
NeedsCompilation: no
Citation: mppR citation info
Materials: README NEWS
CRAN checks: mppR results

Documentation:

Reference manual: mppR.pdf
Vignettes: mppR: An R Package for QTL Analysis in Multi-parent Populations

Downloads:

Package source: mppR_1.3.0.tar.gz
Windows binaries: r-devel: mppR_1.3.0.zip, r-release: mppR_1.3.0.zip, r-oldrel: mppR_1.3.0.zip
macOS binaries: r-release (arm64): mppR_1.3.0.tgz, r-release (x86_64): mppR_1.3.0.tgz, r-oldrel: mppR_1.3.0.tgz
Old sources: mppR archive

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