Any of these types of objects can be passed to msaR to create an html widget. This package in not on CRAN/Bioconductor and can be installed using devtools. See the online docs for an interactive version of this widget.
library(msaR) # read some sequences from a multiple sequence alignment file and display seqfile <- system.file("sequences","AHBA.aln", package="msaR") msaR(seqfile)
All contributions are welcome! Please feel free to submit a pull request.
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This project is licensed under the Boost Software License 1.0.
Permission is hereby granted, free of charge, to any person or organization obtaining a copy of the software and accompanying documentation covered by this license (the “Software”) to use, reproduce, display, distribute, execute, and transmit the Software, and to prepare derivative works of the Software, and to permit third-parties to whom the Software is furnished to do so, all subject to the following:
If you use the MSAViewer on your website, it solely requires you to link to us