nodiv: Compares the Distribution of Sister Clades Through a Phylogeny

An implementation of the nodiv algorithm, see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. <doi:10.1111/2041-210X.12283>. Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped using the SOS statistic.

Version: 1.4.0
Depends: R (≥ 3.0)
Imports: picante, raster, ape, sp, vegan, utils
Suggests: RColorBrewer, parallel, testthat, colorspace
Published: 2020-05-26
Author: Michael Krabbe Borregaard
Maintainer: Michael Krabbe Borregaard <mkborregaard at sund.ku.dk>
License: MIT + file LICENSE
URL: https://github.com/mkborregaard/nodiv
NeedsCompilation: no
Citation: nodiv citation info
Materials: README
CRAN checks: nodiv results

Documentation:

Reference manual: nodiv.pdf

Downloads:

Package source: nodiv_1.4.0.tar.gz
Windows binaries: r-devel: nodiv_1.4.0.zip, r-release: nodiv_1.4.0.zip, r-oldrel: nodiv_1.4.0.zip
macOS binaries: r-release (arm64): nodiv_1.4.0.tgz, r-release (x86_64): nodiv_1.4.0.tgz, r-oldrel: nodiv_1.4.0.tgz
Old sources: nodiv archive

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