pedmut: Mutation Models for Pedigree Likelihood Computations

A collection of functions for modeling mutations in pedigrees with marker data, as used e.g. in likelihood computations with microsatellite data. Implemented models include proportional and stepwise models, as well as random models for experimental work, and custom models allowing the user to apply any valid mutation matrix. Allele lumping is done following the lumpability criteria of Kemeny and Snell (1976), ISBN:0387901922.

Version: 0.1.0
Depends: R (≥ 3.5.0)
Suggests: testthat
Published: 2019-10-01
Author: Magnus Dehli Vigeland ORCID iD [aut, cre]
Maintainer: Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no>
License: GPL-3
NeedsCompilation: no
Materials: README NEWS
CRAN checks: pedmut results

Downloads:

Reference manual: pedmut.pdf
Package source: pedmut_0.1.0.tar.gz
Windows binaries: r-devel: pedmut_0.1.0.zip, r-devel-gcc8: pedmut_0.1.0.zip, r-release: pedmut_0.1.0.zip, r-oldrel: pedmut_0.1.0.zip
OS X binaries: r-release: pedmut_0.1.0.tgz, r-oldrel: pedmut_0.1.0.tgz

Reverse dependencies:

Reverse imports: forrel, pedprobr
Reverse suggests: pedtools

Linking:

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