pheatmap: Pretty Heatmaps

Implementation of heatmaps that offers more control over dimensions and appearance.

Version: 1.0.12
Depends: R (≥ 2.0)
Imports: grid, RColorBrewer, scales, gtable, stats, grDevices, graphics
Published: 2019-01-04
Author: Raivo Kolde
Maintainer: Raivo Kolde <rkolde at gmail.com>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
CRAN checks: pheatmap results

Documentation:

Reference manual: pheatmap.pdf

Downloads:

Package source: pheatmap_1.0.12.tar.gz
Windows binaries: r-devel: pheatmap_1.0.12.zip, r-release: pheatmap_1.0.12.zip, r-oldrel: pheatmap_1.0.12.zip
macOS binaries: r-release (arm64): pheatmap_1.0.12.tgz, r-oldrel (arm64): pheatmap_1.0.12.tgz, r-release (x86_64): pheatmap_1.0.12.tgz
Old sources: pheatmap archive

Reverse dependencies:

Reverse depends: Canopy, KOGMWU, survtype, yaConsensus
Reverse imports: ADAPTS, Anaconda, AnnoProbe, artMS, bestridge, binomialtrend, BioNetStat, CACIMAR, cape, cardelino, CB2, CHETAH, cinaR, CINNA, CiteFuse, CNVMetrics, coca, concordexR, consICA, cophescan, covid19.analytics, CytoGLMM, dagLogo, DaMiRseq, dcortools, DEsubs, deTS, DExMA, dittoSeq, DrugSim2DR, DRviaSPCN, eegc, eHDPrep, epigraHMM, FateID, FeatSeekR, FRASER, FuseSOM, GABB, GEInfo, GeneNMF, GEOexplorer, granulator, Grouphmap, HiCcompare, hybridogram, iCellR, ideal, IDMIR, iglu, ILoReg, imcRtools, immunarch, ImmuneSpaceR, InteRD, klic, LinTInd, LipidomicsR, lisaClust, loci2path, Maaslin2, MBECS, mbQTL, MetaIntegrator, MetaPhOR, mirTarRnaSeq, mitoClone2, MOFA2, monocle, multiHiCcompare, NanoStringNCTools, NPflow, omics, OncoSubtype, oppti, OUTRIDER, pcaExplorer, pcxn, phantasus, phemd, PhosR, Pigengene, POWSC, profileplyr, protGear, psSubpathway, R3CPET, RaceID, RCAS, RLSeq, RQdeltaCT, rrvgo, RTN, RTNsurvival, RVenn, SC3, scater, scider, scMappR, SCORPIUS, scviR, SEtools, sigFeature, signeR, SingleCellSignalR, slanter, SMDIC, spicyR, SpliceWiz, sSNAPPY, statVisual, stJoincount, SubtypeDrug, syntenet, systemPipeTools, tidyheatmaps, timeSeq, tinyarray, tmod, TNBC.CMS, TOmicsVis, umiAnalyzer, VALERIE
Reverse suggests: aggregateBioVar, bakR, bandle, BloodCancerMultiOmics2017, bluster, CaDrA, Cepo, chromVAR, CommKern, ComplexHeatmap, dartR, dartR.base, decoupleR, DEGreport, DepInfeR, DESeq2, diverse, dorothea, eclust, excluderanges, fishpond, FlowSOM, gemma.R, genekitr, iasva, InteractiveComplexHeatmap, ISAnalytics, isomiRs, LymphoSeq, maftools, MAGeCKFlute, MARVEL, memes, MetaNet, MetChem, microeco, mixdir, MsFeatures, NanoTube, nbTransmission, netSmooth, OlinkAnalyze, pagoda2, pctax, Platypus, proDA, progeny, protti, QuantNorm, recount, regionReport, ReporterScore, scaper, scGOclust, SCpubr, scran, sigminer, Single.mTEC.Transcriptomes, SingleR, SpatialOmicsOverlay, spatialTIME, spatzie, systemPipeShiny, TADCompare, TREG, Voyager, xcms, xcore

Linking:

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