phers: Calculate Phenotype Risk Scores

Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and rare genetic variants. See Bastarache et al. 2018 <doi:10.1126/science.aal4043>.

Version: 0.0.2
Depends: R (≥ 3.5)
Imports: checkmate (≥ 2.0.0), data.table (≥ 1.5.0), foreach (≥ 1.5.2), stats (≥ 4.0.2), MASS (≥ 7.3-55), iterators (≥ 1.0.14), BEDMatrix (≥ 2.0.3)
Suggests: doParallel (≥ 1.0.17), knitr, rmarkdown, testthat (≥ 3.1.0), ggplot2 (≥ 3.3.5), qs (≥ 0.25.2)
Published: 2022-05-10
Author: Jake Hughey [aut, cre], Layla Aref [aut]
Maintainer: Jake Hughey <jakejhughey at>
License: GPL-2
NeedsCompilation: no
Materials: NEWS
CRAN checks: phers results


Reference manual: phers.pdf


Package source: phers_0.0.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): phers_0.0.2.tgz, r-oldrel (arm64): phers_0.0.2.tgz, r-release (x86_64): phers_0.0.2.tgz, r-oldrel (x86_64): phers_0.0.2.tgz


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