qcQpcr: Histone ChIP-Seq qPCR Analyzer

Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).

Version: 1.5
Depends: R (≥ 2.10)
Imports: ggplot2
Published: 2018-02-08
Author: Alireza Lorzadeh
Maintainer: Alireza Lorzadeh <alorzadeh at bcgsc.ca>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: qcQpcr results

Downloads:

Reference manual: qcQpcr.pdf
Package source: qcQpcr_1.5.tar.gz
Windows binaries: r-prerel: qcQpcr_1.5.zip, r-release: qcQpcr_1.5.zip, r-oldrel: qcQpcr_1.5.zip
OS X binaries: r-prerel: qcQpcr_1.5.tgz, r-release: qcQpcr_1.5.tgz

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