scImmuneGraph: Visualize the Basic Characteristics of Single-Cell Immune Repertoire

Statistics and visualization of the distribution, diversity and composition of clonotypes, the abundance and length distribution of CDR3, the respective abundance distribution of V and J genes, and the abundance of V-J gene pairs are the basic requirements for single-cell immune group analysis. 'scImmuneGraph' is designed to process data from 10x Genomics Chromium Immune Profiling for T cell receptor (TCR) and immunoglobulin (Ig) enrichment workflows.

Version:	1.1.3
Depends:	R (≥ 4.0)
Imports:	RColorBrewer, scales, ggplot2, cowplot, tibble, stringr, tidyverse, readr, tidyr, dplyr, purrr, gtools, plyr, forcats, easypackages, BiocStyle
Suggests:	rmarkdown, knitr, testthat (≥ 3.0.0)
Published:	2021-12-10
Author:	Fenfei Zhao
Maintainer:	Fenfei Zhao <fenfeizhao2020 at 163.com>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL:	https://github.com/zff-excellent/scImmuneGraph
NeedsCompilation:	no
CRAN checks:	scImmuneGraph results

Documentation:

Reference manual:	scImmuneGraph.pdf
Vignettes:	Using scImmuneGraph

Downloads:

Package source:	scImmuneGraph_1.1.3.tar.gz
Windows binaries:	r-devel: scImmuneGraph_1.1.3.zip, r-release: scImmuneGraph_1.1.3.zip, r-oldrel: scImmuneGraph_1.1.3.zip
macOS binaries:	r-release (arm64): scImmuneGraph_1.1.3.tgz, r-oldrel (arm64): scImmuneGraph_1.1.3.tgz, r-release (x86_64): scImmuneGraph_1.1.3.tgz, r-oldrel (x86_64): scImmuneGraph_1.1.3.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=scImmuneGraph to link to this page.