Implements the algorithm described in Guo, H., and Li, J. (Not yet published), "scSorter: assigning cells to known cell types according to known marker genes". Clusters cells to known cell types based on marker genes specified for each cell type.
| Version: | 0.0.1 |
| Depends: | R (≥ 3.6.0) |
| Imports: | stats (≥ 3.6.0) |
| Suggests: | knitr, rmarkdown, Seurat |
| Published: | 2020-09-01 |
| Author: | Hongyu Guo [aut], Jun Li [aut, cre] |
| Maintainer: | Jun Li <jun.li at nd.edu> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| CRAN checks: | scSorter results |
| Reference manual: | scSorter.pdf |
| Vignettes: |
scSorter |
| Package source: | scSorter_0.0.1.tar.gz |
| Windows binaries: | r-devel: scSorter_0.0.1.zip, r-release: scSorter_0.0.1.zip, r-oldrel: scSorter_0.0.1.zip |
| macOS binaries: | r-release: scSorter_0.0.1.tgz, r-oldrel: scSorter_0.0.1.tgz |
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