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seqhandbook

an R package to complement the handbook on sequence analysis

It provides the datasets used in the examples in the handbook,

as well as functions for :

• describing episodes in individual sequences (at least one episode, number of episodes, position of the start of the first episode)
• measuring association between domains in multidimensional sequence analysis
• heat maps of sequence data
• Globally Interdependent Multidimensional Sequence Analysis (GIMSA)
• smoothing sequences for index plots
• coding sequences for Qualitative Harmonic Analysis
• measuring stress from MDS factors
• symmetrical PLS

installation

Execute the following code within R:

if (!require(devtools)){
    install.packages('devtools')
    library(devtools)
}
install_github("nicolas-robette/seqhandbook")

References