solarius: An R Interface to SOLAR

SOLAR is the standard software program to perform linkage and association mappings of the quantitative trait loci (QTLs) in pedigrees of arbitrary size and complexity. This package allows the user to exploit the variance component methods implemented in SOLAR. It automates such routine operations as formatting pedigree and phenotype data. It also parses the model output and contains summary and plotting functions for exploration of the results. In addition, solarius enables parallel computing of the linkage and association analyses, that makes the calculation of genome-wide scans more efficient. See <http://solar.txbiomedgenetics.org/> for more information about SOLAR.

Version: 0.3.0.2
Imports: methods, plyr (≥ 1.8.1), ggplot2, data.table
Suggests: tools, kinship2, scales, Matrix, gdata, doParallel, iterators, parallel, qqman, rsnps, grid, gridExtra
OS_type: unix
Published: 2015-12-13
Author: Andrey Ziyatdinov [cre, aut], Helena Brunel [aut], Angel Martinez-Perez [aut], Alfonso Buil [aut], Alexandre Perera [cph], Jose Manuel Soria [cph]
Maintainer: Andrey Ziyatdinov <andrey.ziyatdinov at upc.edu>
License: GPL (≥ 3)
URL: https://github.com/ugcd/solarius
NeedsCompilation: no
Materials: README NEWS
CRAN checks: solarius results

Downloads:

Reference manual: solarius.pdf
Package source: solarius_0.3.0.2.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
OS X El Capitan binaries: r-release: solarius_0.3.0.2.tgz
OS X Mavericks binaries: r-oldrel: solarius_0.3.0.2.tgz
Old sources: solarius archive

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