tidysq: Tidy Processing and Analysis of Biological Sequences

A tidy approach to analysis of biological sequences. All processing and data-storage functions are heavily optimized to allow the fastest and most efficient data storage.

Version: 1.1.3
Depends: R (≥ 3.0.0)
Imports: checkmate (≥ 1.9.0), cli (≥ 2.0.0), crayon (≥ 1.3.4), dplyr (≥ 1.0.2), pillar (≥ 1.4.2), Rcpp (≥ 1.0.1), tibble (≥ 2.1.3), vctrs (≥ 0.3.0)
LinkingTo: Rcpp, testthat
Suggests: ape (≥ 5.3), bioseq (≥ 0.1.2), Biostrings (≥ 2.52.0), covr, knitr, lifecycle, purrr, seqinr (≥ 3.4-5), spelling, rmarkdown, testthat (≥ 3.0.0), withr (≥ 2.2.0), rlang, mockr
Published: 2022-01-31
DOI: 10.32614/CRAN.package.tidysq
Author: Dominik Rafacz ORCID iD [cre, aut], Michal Burdukiewicz ORCID iD [aut], Laura Bakala [aut], Leon Eyrich Jessen ORCID iD [ctb], Stefan Roediger ORCID iD [ctb], Jadwiga Slowik ORCID iD [ctb], Weronika Puchala ORCID iD [ctb], Katarzyna Sidorczuk [ctb], Filip Pietluch [ctb], Jaroslaw Chilimoniuk ORCID iD [ctb]
Maintainer: Dominik Rafacz <dominikrafacz at gmail.com>
BugReports: https://github.com/BioGenies/tidysq/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/BioGenies/tidysq
NeedsCompilation: yes
SystemRequirements: GNU make, C++17
Language: en-US
Materials: README NEWS
CRAN checks: tidysq results


Reference manual: tidysq.pdf
Vignettes: Advanced alphabet techniques
Quick Start


Package source: tidysq_1.1.3.tar.gz
Windows binaries: r-devel: tidysq_1.1.3.zip, r-release: tidysq_1.1.3.zip, r-oldrel: tidysq_1.1.3.zip
macOS binaries: r-release (arm64): tidysq_1.1.3.tgz, r-oldrel (arm64): tidysq_1.1.3.tgz, r-release (x86_64): tidysq_1.1.3.tgz, r-oldrel (x86_64): tidysq_1.1.3.tgz
Old sources: tidysq archive


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